BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044815
         (675 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/718 (65%), Positives = 554/718 (77%), Gaps = 46/718 (6%)

Query: 1   MVSFHVLRSHGLRGKPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSP-SPP- 58
           M+SF  L+ HGL+ KPS  P ++   ++ LCY  +H+    N      ++  ++P SPP 
Sbjct: 1   MLSFFTLKFHGLKAKPSLNP-VSYTPLKILCY--YHNTTDNNLDDNNINNGCNTPISPPP 57

Query: 59  -------QSLVKTVCSMVLESYYQQF-HLRS-SPPRLNLQIDIDSLTHEQAITVVASLAN 109
                  QSLV+++CS+V ESY QQ  H+R    P +NL ++ DSLTHEQAITVVASLA+
Sbjct: 58  QKQHLQQQSLVRSICSLVCESYSQQTPHVRLLQSPSINLSVNPDSLTHEQAITVVASLAS 117

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRL 169
           EAGSMVALSFF WAIGF KFR+FMR YIVCATS I N NFERAHEVM CMV  FAEIG+ 
Sbjct: 118 EAGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFERAHEVMDCMVRVFAEIGKF 177

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           +E  +MVIEM N+GL L   TLN V G+A E+GLV YAE VFDEM  RGVC D+ SYKLM
Sbjct: 178 QEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLM 237

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF---------------- 273
            +AYCRMGR+++ DRWL  M+ RG ++DNAT TL+I+ FC+KGF                
Sbjct: 238 AIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGL 297

Query: 274 ----------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                           RGSIKQAFE+LEEMV+KGWKPNVYTHT LIDGLCKKGWTEKAFR
Sbjct: 298 KPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFR 357

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LFLKLVRSD+YKPNVHTYT+MI GYCKE+K+NRAEMLL RMKEQGL+PNT TYT LI GH
Sbjct: 358 LFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGH 417

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K GNFE+AY+LMDLMGKEG + NI+ YNA ID LCKKGR  EA +LLKK F+  LQAD 
Sbjct: 418 SKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADT 477

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TYTIL+SE  ++A+T++AL  F +M KAG+ PD+H Y TLIAAF RQ++M+ESEK F E
Sbjct: 478 VTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAE 537

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A+  GL PTKETYTSMICGY RD N+S A+K+F RM+  GC PD++TYGALISGLCK+SK
Sbjct: 538 AVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESK 597

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           LDEACQ YE+M+ KG+SPCEVTR+TLAYEYCKQ DSATAM+ILE LDKKLWIRTVNTLIR
Sbjct: 598 LDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIR 657

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           KLCSE++VGMA LFFHKLL KDQNVDRV+L A   ACYESNKYAL SDLS+RI++GIG
Sbjct: 658 KLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVSDLSERISKGIG 715


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  947 bits (2448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/712 (65%), Positives = 550/712 (77%), Gaps = 37/712 (5%)

Query: 1   MVSFHVLRSHGLRGKPSRTPSLTLFVI----RSLCYQTH-HHNFLANSKQPAFSSTSSSP 55
           M+S  +L+S+G   K S  P+L   ++    + + + TH +  F+  S  PA    S +P
Sbjct: 1   MISLLILKSNGFPSKLSSPPTLYSPLLSLSSKFISFNTHGYTTFIPTSPLPASPPQSLAP 60

Query: 56  SPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMV 115
            PP+S V+++C +V ESY Q    + S P LNL+I+ +SLTHEQ ITVVASLA EAGS+V
Sbjct: 61  PPPESSVRSICLLVCESYQQTSFSKPSSPSLNLEINPNSLTHEQVITVVASLAQEAGSVV 120

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           +LSFF W IGF+KFRHFMRLYIVCAT+ ++N N +RA EVMQCMV SF+EIG+LKE  +M
Sbjct: 121 SLSFFNWVIGFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNM 180

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           VIEM N+GL L    LN V+ +A  LG V+YAE+VFDEM  R V  D++SYKLMVV YCR
Sbjct: 181 VIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCR 240

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--------------------- 274
           MGR+++ DRWL  M++RG  +DNAT TL+I+ F +KGF                      
Sbjct: 241 MGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLIN 300

Query: 275 -----------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
                      GSIKQAFE+LEEMVRKGWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLV
Sbjct: 301 FSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 360

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           RSDNYKPNV+TYT MI+GYCKEEK+NRAEMLL RMKEQGL+PNTNTYT LI GHCK GNF
Sbjct: 361 RSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNF 420

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            RAY+LMDLMGKEG TPNI+ YNAIIDGLCKKGR  EAY+LL++  +  L ADK+TYTIL
Sbjct: 421 GRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTIL 480

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +SE  +Q + KQAL +F RM K GL PD+H Y  LIA FCRQKK++ESEK F+EA+  GL
Sbjct: 481 ISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGL 540

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            PTKETYTSMICGY RDG+ISSA+K+F +M   GC PD+ITYGALISGLC +SKLDEACQ
Sbjct: 541 LPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQ 600

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            YE+MI  G+SPCEVTRVTLAYEYCKQGDSATAMIILE L+KKLWIRTVNTLIRKLCSEK
Sbjct: 601 LYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEK 660

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           +VG+AALFFHKLL KD NVDR++LAA   ACYESNK+AL SDLS+RI++GIG
Sbjct: 661 KVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERISKGIG 712


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/703 (63%), Positives = 537/703 (76%), Gaps = 55/703 (7%)

Query: 1   MVSFHVLRSHGLRGKPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQS 60
           M+S  +LR+H     P R  SL +   ++L + T                   SPS  QS
Sbjct: 1   MLSSVILRTHA---SPHRLTSLFILRTKTLTHIT-------------------SPSCVQS 38

Query: 61  LVKTVCSMVLESYYQQF-HLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSF 119
            V  VCS+V +SY+  + H R SPP L+L +D +SLTH+QA+T+VASLA++AGSMVALSF
Sbjct: 39  TVTRVCSLVYDSYHHHYNHARFSPPTLHLDVDPNSLTHDQAVTIVASLASDAGSMVALSF 98

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEM 179
           F WAI  +KFRHF RLYI CA SLISN NFE+AHEVMQCMV SFAEIGR+KE   MVIEM
Sbjct: 99  FNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEM 158

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            N GL   T TLN VV I  E+GLVEYAE +FDEMCARGV  +  SY++MVV YC++G V
Sbjct: 159 HNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNV 218

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGF-------------------------- 273
            E+DRWL  M++RG ++DNATL+L++  FC+KGF                          
Sbjct: 219 LESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCM 278

Query: 274 ------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
                 RGS+KQAFE+LEEMV +GWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRS+N
Sbjct: 279 IEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 338

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           +KPNV TYTAMISGYC++EKMNRAEMLL RMKEQGL PNTNTYT+LI GHCK GNFERAY
Sbjct: 339 HKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAY 398

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +LM++M +EG +PN+  YNAI+DGLCKKGRVQEAY++LK  F+  L ADK+TYTIL+SEH
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            KQAE KQAL LF +MVK+G+ PDIH+YTTLIA FCR+K+MKESE FF+EA+  GL PT 
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTN 518

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           +TYTSMICGY R+GN+  A+K+F RM+  GCA D+ITYGALISGLCKQSKLDEA   Y++
Sbjct: 519 KTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           MI KG++PCEVTRVTLAYEYCK  D  +AM++LE L+KKLW+RTVNTL+RKLCSE++VGM
Sbjct: 579 MIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGM 638

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           AALFFHKLL KD NV+RV++AA   ACYESNKY L SDLS RI
Sbjct: 639 AALFFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDLSARI 681


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/647 (67%), Positives = 518/647 (80%), Gaps = 32/647 (4%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           +V+T+CS+V +SYYQQ H+R +PP+L+L +D +SLTH+QAITVVASLA+EAGSMVALSF 
Sbjct: 62  VVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALSFL 121

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           YWAIGF KFRHFMRLYIV AT+LI N N ERA+EVMQCMV +FAE G+LKE  +MV+EM 
Sbjct: 122 YWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQ 181

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N GL   T TLN V+ +A  +GLVE AE +F EMC RGV  D  S+KLMVVA C MGRV 
Sbjct: 182 NQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVL 241

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGF--------------------------- 273
           EA+RWL+AM++RG I+DNAT TL+I AFC KG+                           
Sbjct: 242 EAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 274 -----RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                +GSIKQAFELLEEMVR+GWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRSD Y
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY 361

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPNVHTYTAMI+GYCKE+K+NRAEMLL RM+EQGL+PNTNTYT+LI GHCKVGNF RAY+
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           LMDLMGKEG +PNIY YNAIIDGLCKKG + EAY LL K     LQAD +TYTIL+S H 
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +QA+T ++L  F +M+K G  PDIH+YTTLI+ FCRQK+MKESE+ F+EA++ GL PTK+
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKK 541

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYTSMICGY R GN S AVK FQRM+  GCAPD+ITYGALISGLCK+SKLD+A   Y++M
Sbjct: 542 TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           + KG+SPCEVTR+TLAYEYCK+ DS+TA+ +L+ L+K+ WIRTVNTL+RKLCSE ++ MA
Sbjct: 602 MDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMA 661

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           ALFFHKLL K+ NV+RV+L    N CYESNKY L S+LS+RI EGIG
Sbjct: 662 ALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEGIG 708


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  907 bits (2344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/647 (67%), Positives = 518/647 (80%), Gaps = 32/647 (4%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           +V+T+CS+V +SYYQQ H+R +PP+L+L +D +SLTH+QAITVVASLA+EAGSMVALSF 
Sbjct: 62  VVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALSFL 121

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           YWAIGF KFRHFMRLYIV AT+LI N N ERA+EVMQCMV +FAE G+LKE  +MV+EM 
Sbjct: 122 YWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQ 181

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N GL   T TLN V+ +A  +GLVE AE +F EMC RGV  D  S+KLMVVA C MGRV 
Sbjct: 182 NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVL 241

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGF--------------------------- 273
           EA++WL+AM++RG I+DNAT TL+I AFC KG+                           
Sbjct: 242 EAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 274 -----RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                +GSIKQAFELLEEMVR+GWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRSD Y
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY 361

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPNVHTYTAMI+GYCKE+K+NRAEMLL RM+EQGL+PNTNTYT+LI GHCKVGNF RAY+
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           LMDLMGKEG +PNIY YNAIIDGLCKKG + EAY LL K     LQAD +TYTIL+S H 
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +QA+T ++L  F +M+K G  PDIH+YTTLI+ FCRQK+MKESE+ F+EA++ GL PTK+
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKK 541

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYTSMICGY R GN S AVK FQRM+  GCAPD+ITYGALISGLCK+SKLD+A   Y++M
Sbjct: 542 TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           + KG+SPCEVTR+TLAYEYCK+ DS+TA+ +L+ L+K+ WIRTVNTL+RKLCSE ++ MA
Sbjct: 602 MDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMA 661

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           ALFFHKLL K+ NV+RV+L    N CYESNKY L S+LS+RI EGIG
Sbjct: 662 ALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEGIG 708


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/715 (60%), Positives = 525/715 (73%), Gaps = 53/715 (7%)

Query: 1   MVSFHVLRSHGLRGK-------PSRTPSLTLFVIRSL-CYQTHHHNFLANSKQPAFSSTS 52
           + S  +LR HG   K        S + SL  F         + HH+F ++S         
Sbjct: 27  LASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSL------- 79

Query: 53  SSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAG 112
                 QS +K +CS+VL++Y +Q HLR SP +LNL +D  SLTHEQAI+ VA LA+E G
Sbjct: 80  ------QSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEG 133

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG 172
           SMVALSFFYWA+GF KFR+FMRLYIVC  SL+   N ERAHEV++CMV  FAEIG+LKE 
Sbjct: 134 SMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEA 193

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
             M+++M N GL L T  +NR++ +A E+ LVEYA  VFDEM ARGV  D+ +YK ++V 
Sbjct: 194 VDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVG 253

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------- 273
           YCR G V EADRW+  M++RG ++DNATLTL+ITAFC+K                     
Sbjct: 254 YCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPN 313

Query: 274 -------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
                        RGS+KQAFELLEEMV+ GWKPNVYTHT LI GLCKKGWTE+AFRLFL
Sbjct: 314 LINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFL 373

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           KL+RSDNYKPNVHTYTAMISGYCKEEK++RAEML ERMKEQGL+PNTNTYT+LI GHCK 
Sbjct: 374 KLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKA 433

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           GNF +AY+LM+LM  EG  PN   YN+I+DGLCK+GR +EA++LL   FQ +++AD +TY
Sbjct: 434 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 493

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           TIL+SE  K+A+  QAL    +M K G  PDIH YTTLIAAFCRQ  MK+SEK F E I 
Sbjct: 494 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 553

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL PTKETYTSMICGY R+  +S AVK+FQ+M+  GCAPD+I+YGALISGLCK+S+LDE
Sbjct: 554 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDE 613

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           A Q Y++MI KG+SPCEVTRVTL YEYCK  D A+AM+ILE L+KKLWIRTV+TLIRKLC
Sbjct: 614 ARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLC 673

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            EK+V +AALFFHKLL K+ NVDRV+LAA   AC ESNKYAL SDLS+RI++GIG
Sbjct: 674 CEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKGIG 728


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/643 (64%), Positives = 500/643 (77%), Gaps = 32/643 (4%)

Query: 65   VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
            +CS+VL++Y +Q HLR SP +LNL +D  SLTHEQAI+ VA LA+E GSMVALSFFYWA+
Sbjct: 673  ICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYWAV 732

Query: 125  GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
            GF KFR+FMRLYIVC  SL+   N ERAHEV++CMV  FAEIG+LKE   M+++M N GL
Sbjct: 733  GFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGL 792

Query: 185  PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
             L T  +NR++ +A E+ LVEYA  VFDEM ARGV  D+ +YK ++V YCR G V EADR
Sbjct: 793  VLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADR 852

Query: 245  WLSAMLDRGAILDNATLTLLITAFCDKGF------------------------------- 273
            W+  M++RG ++DNATLTL+ITAFC+K                                 
Sbjct: 853  WICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLC 912

Query: 274  -RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             RGS+KQAFELLEEMV+ GWKPNVYTHT LI GLCKKGWTE+AFRLFLKL+RSDNYKPNV
Sbjct: 913  KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 972

Query: 333  HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            HTYTAMISGYCKEEK++RAEML ERMKEQGL+PNTNTYT+LI GHCK GNF +AY+LM+L
Sbjct: 973  HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 1032

Query: 393  MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
            M  EG  PN   YN+I+DGLCK+GR +EA++LL   FQ +++AD +TYTIL+SE  K+A+
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 1092

Query: 453  TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              QAL    +M K G  PDIH YTTLIAAFCRQ  MK+SEK F E I  GL PTKETYTS
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 1152

Query: 513  MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            MICGY R+  +S AVK+FQ+M+  GCAPD+I+YGALISGLCK+S+LDEA Q Y++MI KG
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212

Query: 573  ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
            +SPCEVTRVTL YEYCK  D A+AM+ILE L+KKLWIRTV+TLIRKLC EK+V +AALFF
Sbjct: 1213 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFF 1272

Query: 633  HKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            HKLL K+ NVDRV+LAA   AC ESNKYAL SDLS+RI++GIG
Sbjct: 1273 HKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKGIG 1315


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/647 (63%), Positives = 492/647 (76%), Gaps = 32/647 (4%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           LVK+VCS+V  SY +Q H+  SP R+NL  D +SLTHEQAITVVASLA+E+GSMVAL FF
Sbjct: 78  LVKSVCSLVYNSYLRQNHVIQSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFF 137

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           YWA+GF KFRHFMRLY+V A SLI+NGN ++AHEVM+CM+ +F+EIGRL E   MV++M 
Sbjct: 138 YWAVGFEKFRHFMRLYLVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQ 197

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N GL   + T+N V+ IA E GL++YAE VFDEM  RGVC D+SS+KLMV+   R G++ 
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGF--------------------------- 273
           EADRWLS M+ RG I DNAT TL+++A C+ G                            
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 317

Query: 274 -----RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                +GSIKQAFE+LEEMVR GWKPNVYTHT LIDGLCK+GWTEKAFRLFLKLVRSD Y
Sbjct: 318 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIY 377

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPNVHTYT+MI GYCKE+K+NRAEML  RMKEQGL PN NTYT+LI GHCK GNF+RAY+
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           LM+LM  EG  PNIY YNA+ID LCKK R  EAYELL KAF   L+AD +TYTIL+ E  
Sbjct: 438 LMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 497

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           KQ++ KQAL  FCRM K G   D+     LIAAFCRQKKMKESE+ FQ  ++ GL PTKE
Sbjct: 498 KQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKE 557

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYTSMI GY ++G+   A+KYF  M + GC PD+ TYG+LISGLCK+S +DEAC+ YE+M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           I +G+SP EVTRVTLAYEYCK+ DSA+AMI+LE LDKKLWIRTV TL+RKLCSEK+VG+A
Sbjct: 618 IDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVGVA 677

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           ALFF KLL KD + DRV+LAA   AC ES K  L +DL++RI+ G+G
Sbjct: 678 ALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVADLTERISRGVG 724


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/649 (63%), Positives = 490/649 (75%), Gaps = 32/649 (4%)

Query: 59   QSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS 118
            Q LVK+VCS+V  SY +Q H+ SSP R+NL  D +SLTHEQAITVVASLA+E+GSMVAL 
Sbjct: 654  QCLVKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALC 713

Query: 119  FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
            FFYWA+GF KFRHFMRLY+V A SL++NGN ++AHEVM+CM+ +F+EIGRL E   MV++
Sbjct: 714  FFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMD 773

Query: 179  MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
            M N GL   + T+N V+ IA ELGL+EYAE VFDEM  RGV  D+SSYKLMV+   R G+
Sbjct: 774  MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833

Query: 239  VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------------- 273
            + EADRWL+ M+ RG I DNAT TL++TA C+ G                          
Sbjct: 834  IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893

Query: 274  -------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                   +GSIKQAFE+LEEMVR GWKPNVYTHT LIDGLCK+GWTEKAFRLFLKLVRSD
Sbjct: 894  LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953

Query: 327  NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             YKPNVHTYT+MI GYCKE+K+NRAEML  RMKEQGL PN NTYT+LI GHCK G+F RA
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 387  YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            Y+LM+LMG EG  PNIY YNA ID LCKK R  EAYELL KAF   L+AD +TYTIL+ E
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 447  HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
              KQ +  QAL  FCRM K G   D+     LIAAFCRQKKMKESE+ FQ  ++ GL PT
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133

Query: 507  KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
            KETYTSMI  Y ++G+I  A+KYF  M + GC PD+ TYG+LISGLCK+S +DEAC+ YE
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193

Query: 567  SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
            +MI +G+SP EVTRVTLAYEYCK+ DSA AMI+LE LDKKLWIRTV TL+RKLCSEK+VG
Sbjct: 1194 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVG 1253

Query: 627  MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            +AALFF KLL KD + DRV+LAA   AC ES K  L +DL++RI+ G+G
Sbjct: 1254 VAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISRGVG 1302


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  858 bits (2217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/649 (63%), Positives = 490/649 (75%), Gaps = 32/649 (4%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS 118
           Q LVK+VCS+V  SY +Q H+ SSP R+NL  D +SLTHEQAITVVASLA+E+GSMVAL 
Sbjct: 53  QCLVKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALC 112

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
           FFYWA+GF KFRHFMRLY+V A SL++NGN ++AHEVM+CM+ +F+EIGRL E   MV++
Sbjct: 113 FFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMD 172

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M N GL   + T+N V+ IA ELGL+EYAE VFDEM  RGV  D+SSYKLMV+   R G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------------- 273
           + EADRWL+ M+ RG I DNAT TL++TA C+ G                          
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292

Query: 274 -------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                  +GSIKQAFE+LEEMVR GWKPNVYTHT LIDGLCK+GWTEKAFRLFLKLVRSD
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            YKPNVHTYT+MI GYCKE+K+NRAEML  RMKEQGL PN NTYT+LI GHCK G+F RA
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y+LM+LMG EG  PNIY YNA ID LCKK R  EAYELL KAF   L+AD +TYTIL+ E
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             KQ +  QAL  FCRM K G   D+     LIAAFCRQKKMKESE+ FQ  ++ GL PT
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           KETYTSMI  Y ++G+I  A+KYF  M + GC PD+ TYG+LISGLCK+S +DEAC+ YE
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
           +MI +G+SP EVTRVTLAYEYCK+ DSA AMI+LE LDKKLWIRTV TL+RKLCSEK+VG
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVG 652

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           +AALFF KLL KD + DRV+LAA   AC ES K  L +DL++RI+ G+G
Sbjct: 653 VAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISRGVG 701


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/621 (60%), Positives = 464/621 (74%), Gaps = 50/621 (8%)

Query: 1   MVSFHVLRSHGLRGKPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQS 60
           M+ F +L++HG      R  S+  F  +SLCY               +SS++      Q+
Sbjct: 1   MLCFVILKNHGF---SRRFTSIFTFKRKSLCY---------------YSSSTQLQPISQT 42

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           +V+ VCS+V ESY Q  H+R S  RL+  I++D LTHEQA++VVASLA++AGSMV LSFF
Sbjct: 43  MVQRVCSLVCESYNQHAHMRVSSQRLHFGIEVDFLTHEQAVSVVASLASDAGSMVTLSFF 102

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           +WAIG+ KFRHFMRLYIVCA SLI N N E+A EVM+CMV SF+E+GRLKE   MVIEM 
Sbjct: 103 HWAIGYPKFRHFMRLYIVCAMSLIGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMH 162

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N GL   T TLN ++ +  E+GLVEYAE +F+EMC RGV  D+ SY++MVV YC++G + 
Sbjct: 163 NQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNIL 222

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGF--------------------------- 273
           EAD+WLS ML+RG ++DNAT TL+I+ F  KG+                           
Sbjct: 223 EADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMI 282

Query: 274 -----RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                RGSIKQAFE+LEEMV KGWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRS+N+
Sbjct: 283 EGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENH 342

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPNV TYTAMISGYC+E+K+NRAEMLL RMKEQGL+PNTNTYT+LI GHCK GNFERAYD
Sbjct: 343 KPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD 402

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           LM+LM  EG +PN+  YNAI++GLCK+GRVQEAY++L+  FQ  L+ DK TY IL+SEH 
Sbjct: 403 LMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 462

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           KQ   +QAL LF +M+K G+ PDIH+YTTLIA FCR+ +MKESE FF+EA+  G+ PT +
Sbjct: 463 KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNK 522

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYTSMICGY R+GN++ A+K+F R++  GCAPD+ITYGA+ISGLCKQSK DEA   Y+SM
Sbjct: 523 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582

Query: 569 IGKGISPCEVTRVTLAYEYCK 589
           I KG+ PCEVTR+TLAYEYCK
Sbjct: 583 IEKGLVPCEVTRITLAYEYCK 603



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 224/453 (49%), Gaps = 9/453 (1%)

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
           + MV ++  +GR+ EA   +  M ++G + +  TL  +I    + G    ++ A  L EE
Sbjct: 139 RCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGL---VEYAELLFEE 195

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G +P+  ++ V++   CK G   +A + +L ++    +  +  T+T +IS +  + 
Sbjct: 196 MCVRGVQPDSISYRVMVVMYCKIGNILEADK-WLSVMLERGFVVDNATFTLIISRFSGKG 254

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
              RA     R+ + GL PN   +T +I G CK G+ ++A+++++ M  +G  PN+Y + 
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           ++IDGLCKKG  ++A+ L  K  + E  + + +TYT ++S + ++ +  +A  L  RM +
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL P+ + YTTLI   C+    + +        + G  P   TY +++ G  + G +  
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A K  +   Q G  PD  TY  L+S  CKQ  + +A   +  M+  GI P   +  TL  
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494

Query: 586 EYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +C++     + +  E   +   I   +T  ++I   C E  + +A  FFH+L       
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554

Query: 643 DRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           D ++  A+ +  C +S +    S     I +G+
Sbjct: 555 DSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 327/680 (48%), Positives = 432/680 (63%), Gaps = 59/680 (8%)

Query: 34  THHH------NFLANSKQPAFSSTS---SSPSPPQSLVKTVCSMVLESYYQQFHLRSSPP 84
           +HH       N+L  SK   FS+T+   S+P PP+  V    S V           SSP 
Sbjct: 3   SHHRHGRRLLNYL--SKPQHFSTTTATFSAPPPPR--VSDAASHV-----------SSPG 47

Query: 85  RLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLI 144
            ++   D  +L  + AI  ++SLA+ AGS  AL  F         RH MRLY+  AT+ +
Sbjct: 48  AVD--TDPGALAPDDAIVALSSLADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFV 105

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
             G+   AHE M+ MV++FAE GRL E   MV EM ++GLP    T N V+    + G  
Sbjct: 106 DRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSF 165

Query: 205 EYAEEVFDEMCARG-VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            YA +VFD M  RG +  DA S++ ++V  CR GR+ E D  L+ M  +G  LDNAT T+
Sbjct: 166 AYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTV 225

Query: 264 LITAFCDKGF--------------------------------RGSIKQAFELLEEMVRKG 291
           ++  FC KG                                 R  +KQAF +LEEMV KG
Sbjct: 226 IVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG 285

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            KPNVYTHT LI+GLCK GWTE+AFRLFLKL++S +YKPNVHTYT MI GYCKE K+ RA
Sbjct: 286 LKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARA 345

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           EMLL RM EQGL PNTNTYT+LI GHCK G+F  A++LM+ M +EG  PNIY YNA+IDG
Sbjct: 346 EMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDG 405

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LCKKG++QEAY++L+ A  + LQ DK+TYT++++EH KQ     AL LF RM + G +PD
Sbjct: 406 LCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPD 465

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           IH YTTLIA +C+Q++M+ES+K F + +   L PTK+TYTSMI GY + G  +SA++ F+
Sbjct: 466 IHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFE 525

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           RM Q GC  D+ITYGALISGLCK+S+L+EA   YE M+ K + PCEVT VTLA+EYC++ 
Sbjct: 526 RMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRRE 585

Query: 592 DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            +  A+ IL+ LDK+    TVN L+RKL +   V  A+LF  K L  D  VDR++  +  
Sbjct: 586 KAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFI 645

Query: 652 NACYESNKYALFSDLSQRIA 671
           N+CY + KYAL +++S++I+
Sbjct: 646 NSCYANKKYALATEISEKIS 665



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 160/342 (46%), Gaps = 9/342 (2%)

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKE 396
           M++ + +  ++  A  ++  M+  GL     T   ++      G+F  A  + D ++ + 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+  ++ A+I G C+ GR++E   LL     +    D  T T+++    ++   +  
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF RM++ G  P++  YT  I   C++  +K++    +E +  GL P   T+TS+I G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNI-TYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             + G    A + F ++ +      N+ TY  +I G CK+ KL  A      M+ +G++P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
              T  TL   +CK+G    A  ++  + ++ +   I T N LI  LC + ++  A    
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 633 HKLLGKDQNVDRVSLAAL-KNACYESN-KYALFSDLSQRIAE 672
                +   +D+V+   +    C + +  YAL  DL  R+AE
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYAL--DLFNRMAE 459


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/616 (49%), Positives = 414/616 (67%), Gaps = 32/616 (5%)

Query: 91  DIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFE 150
           D  +L  + AI  + ++A+ AGS  AL+ F         R  MRLY+  AT+ ++ G+  
Sbjct: 49  DPGALAPDDAIASLPTVADSAGSAAALALFRRLASRPDLRRLMRLYVTAATAFVARGSLP 108

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
            AHEVM+ MV++F E GRL E   MV+EM ++GLPL   T N V+ +  E G   YA +V
Sbjct: 109 MAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKV 168

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           FD M   GVC D  S++ +VV  CR G+V E D  L+AM   G  LDNAT T+++ + C+
Sbjct: 169 FDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 228

Query: 271 KGF--------------------------------RGSIKQAFELLEEMVRKGWKPNVYT 298
           KG                                 R  +KQAF +LEEMV +G KPNVYT
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           HT LIDGLCK GWTE+AFRLFLKL++S +YKPNVHTYT MI GYC+E K+ RAEMLL RM
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            EQGL PNTNTYT+LI GHCK G+F+RA++LM+ M +EG  PNIY YNA+IDG CKKG++
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           QEAY++L+ A  + L+ DKITYTIL++EH KQ     AL LF RMV+ G  PDI AYT+L
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I+ +C+Q++M+ES+KFF + +  GL PTK+TYTSMI GY + G  + A++ F+RM Q GC
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             D+ITYGALISGLCK+S+L+EA   YE M+ K + PCEVTRVTL +EYC++  ++ A+ 
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 588

Query: 599 ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
           +L+ LDK+  + TV+ ++RKL +   V  A+LF  K+L +D  VD  +     N+CYE+N
Sbjct: 589 VLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENN 648

Query: 659 KYALFSDLSQRIAEGI 674
           +YAL S++S++ ++ I
Sbjct: 649 RYALASEMSEKFSKKI 664


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 303/620 (48%), Positives = 410/620 (66%), Gaps = 35/620 (5%)

Query: 90  IDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNF 149
           +D  +L  + AI ++ S+A+  GS  AL+ F         R  MRLY   AT+ ++ GN 
Sbjct: 45  LDPTALAPDDAIALLPSVADSEGSAAALALFRRLSSRPDMRRLMRLYATAATAFVARGNL 104

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC-ELGLVEYAE 208
             AHE  + MV++FAE GRL+E   M++E+ ++GLPL+  T N V+ +     G   +A 
Sbjct: 105 PMAHEAARAMVAAFAEAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAR 164

Query: 209 EVFDEMC--ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           E FD M   A GV  D  S++ +V+  CR GR  EAD  L+AM  +G  LD+AT T+++ 
Sbjct: 165 EAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVR 224

Query: 267 AFCDKGF--------------------------------RGSIKQAFELLEEMVRKGWKP 294
           AFC +G                                 RG +KQAF +LEEMV KG KP
Sbjct: 225 AFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKP 284

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NVYTHT LIDGLCK GW E+AFRLFLKLV+S +YKPNVHTYT MI GYCKE K+ RAEML
Sbjct: 285 NVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 344

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L RM EQGL PNTNTYT+LI+GHCK G+F+RA++LM+ M  EG  PNIY YNAII G CK
Sbjct: 345 LGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG++QEAY++L+ A  + L  DK+TYTIL++EH KQ     AL LF +M +   +PDIH 
Sbjct: 405 KGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHT 464

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YTT+IA +C+Q++M++S++ F + ++ GL PTK+TYTSMI GY R G ++SA+K F+RM 
Sbjct: 465 YTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMV 524

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           Q GC PD+ITYGALIS LCK+S+L+EA   +E+M+ K + PC+VTRVTLAYEYC++    
Sbjct: 525 QHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKIT 584

Query: 595 TAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            A+  L+ LDK+    T + L+RKL +   +  A+LF   +L K   VD  +  +  N+C
Sbjct: 585 IAVSFLDRLDKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSC 644

Query: 655 YESNKYALFSDLSQRIAEGI 674
           YESN+YAL S++S++I++ I
Sbjct: 645 YESNRYALASEISEKISKRI 664


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 285/555 (51%), Positives = 379/555 (68%), Gaps = 32/555 (5%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           AHEVM+ MV++F E GRL E   MV+EM ++GLPL   T N V+ +  E G   YA +VF
Sbjct: 2   AHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVF 61

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D M   GV      +  +VV  CR G+V E D  L+AM   G  LDNAT T+++ + C+K
Sbjct: 62  DGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEK 121

Query: 272 GF--------------------------------RGSIKQAFELLEEMVRKGWKPNVYTH 299
           G                                 R  +KQAF +LEEMV +G KPNVYTH
Sbjct: 122 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 181

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T LIDGLCK GWTE+AFRLFLKL++S +YKPNVHTYT MI GYC+E K+ RAEMLL RM 
Sbjct: 182 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV 241

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           EQGL PNTNTYT+LI GHCK G+F+RA++LM+ M +EG  PNIY YNA+IDG CKKG++Q
Sbjct: 242 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ 301

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EAY++L+ A  + L+ DKITYTIL++EH KQ     AL LF RMV+ G  PDI AYT+LI
Sbjct: 302 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 361

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + +C+Q++M+ES+KFF + +  GL PTK+TYTSMI GY + G  + A++ F+RM Q GC 
Sbjct: 362 STYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 421

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D+ITYGALISGLCK+S+L+EA   YE M+ K + PCEVTRVTL +EYC++  ++ A+ +
Sbjct: 422 ADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSV 481

Query: 600 LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L+ LDK+  + TV+ ++RKL +   V  A+LF  K+L +D  VD  +     N+CYE+N+
Sbjct: 482 LDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNR 541

Query: 660 YALFSDLSQRIAEGI 674
           YAL S++S++ ++ I
Sbjct: 542 YALASEMSEKFSKKI 556



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 44/345 (12%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           FR F++L        I + +++        M+  +   G+L     +++ M   GL   T
Sbjct: 198 FRLFLKL--------IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 249

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +T   ++G  C+ G  + A E+ ++M   G   +  +Y  ++  +C+ G++ EA + L  
Sbjct: 250 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 309

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
              +G   D  T T+LIT  C +   G I  A +L + MV  G  P++  +T LI   C+
Sbjct: 310 ATSQGLKFDKITYTILITEHCKQ---GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 366

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +   E++ + F K +      P   TYT+MI+GYCK  +   A  + ERM + G   ++ 
Sbjct: 367 QRQMEESQKFFDKCLMI-GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI 425

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP---------------------------- 400
           TY +LI G CK    E A  L + M  +   P                            
Sbjct: 426 TYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL 485

Query: 401 ----NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
                ++  + ++  L   G V  A   LKK    +   D  TYT
Sbjct: 486 DKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYT 530


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/625 (47%), Positives = 408/625 (65%), Gaps = 36/625 (5%)

Query: 83  PPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATS 142
           P   +L +D  +L+ + AI  + S+A+  GS  AL+ F         RH MRLY   AT 
Sbjct: 43  PTAPDLDLDPSALSPDDAIASLTSVADNEGSAAALALFRRLSTRPDLRHLMRLYATAATL 102

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC-EL 201
            ++ GN   AHE  + MV++FAE  RL+E   M++E+ ++GLPL+  T N V+ +   + 
Sbjct: 103 FVARGNLPMAHEAARAMVAAFAETNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQR 162

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
               +A + FD M   GV  DA S++ +V+  C+ GR  EAD  L+AM   G  LD+AT 
Sbjct: 163 HHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATC 219

Query: 262 TLLITAFCDKGF--------------------------------RGSIKQAFELLEEMVR 289
           T+++ AFC +G                                 RG +KQAF +LEEMV 
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           KG KPNVYTHT LIDGLCK GWTE+AFRLFLKLV+S +YKPNVHTYT MI GYCKE K+ 
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           RAEMLL RM EQGL PNTNTYT+LI GHC+ G+F+RA++LM+ M  EG  PNIY YNAII
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G CKKG++Q+AY++L+ A  + L  DK+TYT+L++EH KQ     AL LF +M +   +
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PDI  YTT+IA +C+Q++M++S++ F + ++ GL PTK+TYTSMI GY R G  +SA+K 
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F+RM Q GC PD ITYGALISGLCK+S+L+EA   +E+M+ K + PC+VT VTLAYEYC+
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCR 579

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
           +  +  A+  L+ LDK+      + L+RKL +   +  A+LF   +L K   VD  +  +
Sbjct: 580 RDKTTIAVSFLDGLDKRQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTS 639

Query: 650 LKNACYESNKYALFSDLSQRIAEGI 674
             N+CYESN+YAL S++S++I++ I
Sbjct: 640 FINSCYESNRYALASEISEKISKRI 664


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/447 (52%), Positives = 303/447 (67%), Gaps = 32/447 (7%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
            R  MRLY+  AT+ ++ G+   AHEVM+ MV++F E GRL E   MV+EM ++GLPL  
Sbjct: 79  LRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCV 138

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
            T N V+ +  E G   YA +VFD M   GVC D  S++ +VV  CR G+V E D  L+A
Sbjct: 139 ETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAA 198

Query: 249 MLDRGAILDNATLTLLITAFCDKGF--------------------------------RGS 276
           M   G  LDNAT T+++ + C+KG                                 R  
Sbjct: 199 MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRY 258

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +KQAF +LEEMV +G KPNVYTHT LIDGLCK GWTE+AFRLFLKL++S +YKPNVHTYT
Sbjct: 259 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 318

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            MI GYC+E K+ RAEMLL RM EQGL PNTNTYT+LI GHCK G+F+RA++LM+ M +E
Sbjct: 319 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 378

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PNIY YNA+IDG CKKG++QEAY++L+ A  + L+ DKITYTIL++EH KQ     A
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 438

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L LF RMV+ G  PDI AYT+LI+ +C+Q++M+ES+KFF + +  GL PTK+TYTSMI G
Sbjct: 439 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 498

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNI 543
           Y + G  + A++ F+RM Q GC  D+I
Sbjct: 499 YCKVGRSTMALRVFERMVQNGCFADSI 525



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 156/342 (45%), Gaps = 8/342 (2%)

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            M++ + +  ++  A  ++  M+  GL     T   ++    + G+F  A  + D M + 
Sbjct: 108 GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 167

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+  ++ A++   C++G+V+E   LL   ++     D  T T+++    ++   K  
Sbjct: 168 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 227

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
              F RM++ G  P++  YT  I   C+++ +K++    +E +  GL P   T+T++I G
Sbjct: 228 SEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 287

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNI-TYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             + G    A + F ++ +      N+ TY  +I G C++ KL  A      M+ +G+ P
Sbjct: 288 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 347

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
              T  TL   +CK G    A  ++  + ++ +   I T N +I   C + ++  A    
Sbjct: 348 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 407

Query: 633 HKLLGKDQNVDRVSLAAL-KNACYESN-KYALFSDLSQRIAE 672
                +    D+++   L    C + +  YAL  DL  R+ E
Sbjct: 408 RMATSQGLKFDKITYTILITEHCKQGHITYAL--DLFDRMVE 447


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 250/492 (50%), Gaps = 7/492 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++  ++  RL +   ++ EM +NG      + N V+   C+   VE A  + ++M  RG
Sbjct: 50  MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG 109

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++   C++ +V EA R +  M+ RG   +  T   L+  FC  G    + 
Sbjct: 110 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG---DLD 166

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A EL+ +M  +G++PN  T+  ++ GLC     + A +LF ++  S +  P+V TY+ +
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    K  K++ A  L+E M  +G  PN  TY+SL++G CK G  + A  L+  M + GC
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI  YN IIDG CK GR+ EAY LL++      Q + +TYT+LL    K  + + A+G
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   MV+ G  P++  Y +L+  FC++ +++ + +     I  G  P   +Y ++I G  
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +   V   ++M    C PD +T+  +I  +CK  ++D A + +  +   G +P  V
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW----IRTVNTLIRKLCSEKRVGMAALFFHK 634
           T  +L +  CK      A  +L  + +K      I T NT+I  LC  KRV  A   F +
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526

Query: 635 LLGKDQNVDRVS 646
           +L      D V+
Sbjct: 527 MLSDGLAPDDVT 538



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 233/446 (52%), Gaps = 5/446 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V S  + G++ +   +V  M + G      T + ++   C+ G ++ A  +   M   G
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  +C++GR+ EA   L  M+D G   +  T T+L+ AFC  G     +
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG---KAE 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+E MV KG+ PN++T+  L+D  CKK   E+A +L   +++     PNV +Y  +
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTV 401

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  K++   +LLE+M     +P+  T+ ++I   CK    + AY+L +L+ + GC
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQAL 457
           TPN+  YN+++ GLCK  R  +A  LL++  +++    D ITY  ++    K     +A 
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF +M+  GL PD   Y+ +I++ C+ + M E+    +  +  G  P   TY ++I G+
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 581

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + GN+  A++  Q +   G  PD +T+   I  L K+ +L +A +  E+M+  G+ P  
Sbjct: 582 CKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 641

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
           VT  TL   +C    +  A+ + E +
Sbjct: 642 VTYNTLLKGFCDASRTEDAVDLFEVM 667



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 234/465 (50%), Gaps = 20/465 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMT 180
           Y     SL+ +G  + A  +++ MVS                  + G+L E  +++  MT
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
            +G      T N ++   C+LG ++ A  + +EM   G   +  +Y +++ A+C+ G+  
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +A   +  M+++G + +  T   L+  FC K     +++A +LL  M++KG  PNV ++ 
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD---EVERACQLLSSMIQKGCVPNVVSYN 399

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            +I GLCK     +   L L+ + S+N  P++ T+  +I   CK  +++ A  L   ++E
Sbjct: 400 TVIAGLCKATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERA-YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            G  PN  TY SL++G CK   F++A Y L ++  K+GC+P+I  YN +IDGLCK  RV 
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            AY+L  +     L  D +TY+I++S   K     +A  +   M+K G +P    Y TLI
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             FC+   + ++ +  Q  ++ G +P   T++  I    + G +  A +  + M + G  
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 638

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           PD +TY  L+ G C  S+ ++A   +E M   G  P   T  TL 
Sbjct: 639 PDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 233/512 (45%), Gaps = 38/512 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F  +G L     +V +MT  G      T N ++   C    ++ A ++F EM   G
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214

Query: 219 VCA-DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--- 274
            C  D  +Y  +V +  + G+V +A R + AM+ +G   +  T + L+   C  G     
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274

Query: 275 -----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                        G I +A+ LLEEMV  G +PNV T+TVL+D 
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            CK G  E A  L   +V    Y PN+ TY +++  +CK++++ RA  LL  M ++G +P
Sbjct: 335 FCKCGKAEDAIGLVEVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  +Y ++I G CK         L++ M    C P+I  +N IID +CK  RV  AYEL 
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 453

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV-KAGLNPDIHAYTTLIAAFCR 484
               +     + +TY  L+    K     QA  L   M  K G +PDI  Y T+I   C+
Sbjct: 454 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 513

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K++  + K F + ++ GL P   TY+ +I    +   +  A    + M + G  P  IT
Sbjct: 514 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 573

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           YG LI G CK   LD+A +  + ++ KG  P  VT         K+G    A  +LE++ 
Sbjct: 574 YGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 633

Query: 605 KKLWIR---TVNTLIRKLCSEKRVGMAALFFH 633
           +   +    T NTL++  C   R   A   F 
Sbjct: 634 RAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 182/391 (46%), Gaps = 41/391 (10%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M RKG K +   H  ++ GLC  G    A   F ++  S    P+  TY  MI+G  K +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM--SKTCPPDSVTYNTMINGLSKSD 58

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  LLE M + G  PN  +Y ++++G CK    E A  L++ M   GC P++ +Y 
Sbjct: 59  RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+GLCK  +V EA  ++ K  QR  Q + ITY  L+    +  +   A+ L  +M + 
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178

Query: 467 GLN------------------------------------PDIHAYTTLIAAFCRQKKMKE 490
           G                                      PD+  Y+T++ +  +  K+ +
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +  +  ++ G  P   TY+S++ G  + G +  A    QRM + GC+P+ +TY  +I 
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           G CK  ++DEA    E M+  G  P  VT   L   +CK G +  A+ ++E + +K ++ 
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 358

Query: 611 ---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              T N+L+   C +  V  A      ++ K
Sbjct: 359 NLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 178/362 (49%), Gaps = 4/362 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +F + G+ ++   +V  M   G      T N ++ + C+   VE A ++   M  +G
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY  ++   C+  +V E    L  ML    + D  T   +I A C K +R  I 
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC-KTYRVDI- 448

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+EL   +   G  PN+ T+  L+ GLCK    ++A  L  ++ R     P++ TY  +
Sbjct: 449 -AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK ++++RA  L  +M   GL P+  TY+ +I   CK    + A ++++LM K G 
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    Y  +IDG CK G + +A E+L+    +    D +T++I +    K+   +QA  
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++AGL PD   Y TL+  FC   + +++   F+     G  P   TYT+++ G+L
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV-GHL 686

Query: 519 RD 520
            D
Sbjct: 687 VD 688



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 5/282 (1%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G   +   + +I+ GLC  G+  +A  L  +   +    D +TY  +++   K   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDR 59

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+ L   MV  G  P++ +Y T++  FC+  +++ +    ++ +  G  P   +YT+
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  +   +  A +   +M Q GC P+ ITYG L+ G C+   LD A +    M  +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 573 ISPCEVTRVTLAYEYC--KQGDSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
             P  +T   + +  C  ++ DSA  +   + ES      + T +T++  L    +V  A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
                 ++ K  + + V+ ++L +   ++ K    + L QR+
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 232/430 (53%), Gaps = 4/430 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +    ++V  M N GL     T N V+   C+    + A+EVF  M    V  D  S+
Sbjct: 206 GDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSF 265

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +CR+G V EA ++   M  RG   D  + + LI  F     RG +  A   L E
Sbjct: 266 NILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST---RGKMDHAAAYLRE 322

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P+   +T++I G C+ G   +A R+  ++V      P+V TY  +++G CK+ 
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV-GLGCLPDVVTYNTLLNGLCKQH 381

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  AE LL  MKE+G+ P+  T+T+LI+G+C+ GNFE+A  L D +  +   P++ AYN
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDG+C+KG + +A EL      RE+  + +TY+IL+  H ++ + ++A G    MV  
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P+I  Y ++I  +CR   +K+ ++F Q+ +   + P   T+ ++I GY+++ N+  A
Sbjct: 502 GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGA 561

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  M +    PD +TY  +I+G  +Q  ++EA + ++ M   GI P   T ++L   
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621

Query: 587 YCKQGDSATA 596
           +   G+S  A
Sbjct: 622 HVTAGNSKEA 631



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 217/446 (48%), Gaps = 8/446 (1%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLY-IVCATSLISNGNFERAHEVM 156
           + AI +V S+AN+      ++F     G  K R F +   +  A    S     R+  ++
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNIL 268

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
              +  F  +G ++E      EM   G+     + + ++G+    G +++A     EM  
Sbjct: 269 ---IGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG 325

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  D   Y +++  +CR G ++EA R    M+  G + D  T   L+   C +     
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH---R 382

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A ELL EM  +G  P++ T T LI G C+ G  EKA +LF  L+     +P+V  Y 
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ-RLRPDVVAYN 441

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++I G C++  + +A  L + M  + + PN  TY+ LI  HC+ G  E A+  +D M  +
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PNI  YN+II G C+ G V++  + L+K  Q  +  D IT+  L+  ++K+     A
Sbjct: 502 GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGA 561

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M K  + PD   Y  +I  F  Q  M+E+ + F++   +G+ P + TY S+I G
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDN 542
           ++  GN   A +    M   G APD+
Sbjct: 622 HVTAGNSKEAFQLHDEMMHRGFAPDD 647



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 245/539 (45%), Gaps = 44/539 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   ++ ++ +  + +E F     + ++ +P+  S  N ++      G    AEE +  
Sbjct: 88  QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRL 147

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + +     +A +  +MV +YC+     +AD  +S M  R    D  T  +LI    D  F
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLI----DARF 203

Query: 274 R-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           R G +  A  L++ M  KG KP + T   ++ GLCK    +KA  +F  + +  +  P+V
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQC-SVAPDV 262

Query: 333 HTYTAMISGYCK----EE-------------------------------KMNRAEMLLER 357
            ++  +I G+C+    EE                               KM+ A   L  
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           MK  GL+P+   YT +I G C+ G+   A  + D M   GC P++  YN +++GLCK+ R
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A ELL +  +R +  D  T+T L+  + +    ++AL LF  ++   L PD+ AY +
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   CR+  + ++ + + +     +FP   TY+ +I  +   G +  A  +   M   G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+ +TY ++I G C+   + +  QF + M+   I P  +T  TL + Y K+ +   A 
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +   ++K++      T N +I     +  +  A   F K+       DR +  +L N 
Sbjct: 563 NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 193/386 (50%), Gaps = 4/386 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++G  C +G VE A + + EM  RGV  D  S+  ++  +   G++  A  +L  M
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G + D    T++I  FC  G   S+ +A  + +EMV  G  P+V T+  L++GLCK+
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAG---SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQ 380

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A  L L  ++     P++ T+T +I GYC++    +A  L + +  Q L P+   
Sbjct: 381 HRLLDAEEL-LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y SLI G C+ G+  +A +L D M      PN   Y+ +ID  C+KG+V+EA+  L +  
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    + +TY  ++  + +    K+      +M++  + PD+  + TLI  + +++ M 
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMH 559

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   F       + P   TY  +I G+   GN+  A + F++M   G  PD  TY +LI
Sbjct: 560 GAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619

Query: 550 SGLCKQSKLDEACQFYESMIGKGISP 575
           +G        EA Q ++ M+ +G +P
Sbjct: 620 NGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 195/373 (52%), Gaps = 11/373 (2%)

Query: 308 KKGW---TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           + GW    E+A+RL L    S + + N +T   M+  YCK  + ++A+ ++  M+++ + 
Sbjct: 134 RAGWPHLAEEAYRLVL----SSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVF 189

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T+  LI    + G+ + A  L+D M  +G  P I  +N+++ GLCK  R  +A E+
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +   Q  +  D  ++ IL+    +  E ++A+  +  M + G+ PD+ +++ LI  F  
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + KM  +  + +E    GL P    YT +I G+ R G++S A++    M  +GC PD +T
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES-L 603
           Y  L++GLCKQ +L +A +    M  +G++P   T  TL + YC+ G+   A+ + ++ L
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 604 DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKY 660
            ++L    V  N+LI  +C +  +  A   +  +  ++   + V+ + L ++ C +    
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 661 ALFSDLSQRIAEG 673
             F  L + +++G
Sbjct: 490 EAFGFLDEMVSKG 502


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 229/430 (53%), Gaps = 4/430 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +    ++V  M N GL     T N V+   C+    + A+EVF  M    V  D  S+
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +CR+G V EA ++   M  R    D  + + LI  F     RG +  A   L E
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR---RGEMDHAGAYLRE 322

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P+   +T++I G C+ G   +A R+  ++V      P+V TY  +++G CK+ 
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV-GFGCLPDVVTYNTLLNGLCKQH 381

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  AE LL  M+E+G+ P+  T+T+LI+G+C+ GNFE A  L D + ++   P++  YN
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDG+C+KG + +A EL      RE+  + ITY+IL+  H ++ + + A G    MVK 
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKK 501

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P+I  Y ++I  +CR   +K+ ++F Q+     +FP   T+ ++I GY+++ N+  A
Sbjct: 502 GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGA 561

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  M +    PD +TY  +I+G  +Q  + +A + ++ M   GI P   T ++L   
Sbjct: 562 FNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621

Query: 587 YCKQGDSATA 596
           +   G+S  A
Sbjct: 622 HVTAGNSKQA 631



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 217/445 (48%), Gaps = 6/445 (1%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           + AI +V S+AN       +++     G  K R F +   V  T  +   +         
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRT--MDQCSVAPDVRSFN 266

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++  F  +G +KE      EM +  +     + + ++G+    G +++A     EM   
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D   Y +++  +CR G ++EA R    M+  G + D  T   L+   C +     +
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH---RL 383

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A +LL EM  +G  P++ T T LI G C++G  E A +LF  L+R    +P+V TY +
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ-RLRPDVVTYNS 442

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G C++  + +A  L + M  + +LPN  TY+ LI  HC+ G  E A+  +D M K+G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PNI  YN+II G C+ G V++  + L+K  Q  +  D IT+  L+  ++K+     A 
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAF 562

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M K  + PD   Y  +I  F  Q  M+++ + F+    +G+ P + TY S+I G+
Sbjct: 563 NVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGH 622

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDN 542
           +  GN   A +    M   G APD+
Sbjct: 623 VTAGNSKQAFQLHDEMIHRGFAPDD 647



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 246/539 (45%), Gaps = 44/539 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   ++ ++ +  + +E F     + ++ +P+  S  N ++ +    G    A+E +  
Sbjct: 88  QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRL 147

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + +     +A +  +MV +YC+      AD  +S M  R    D  T  +LI    D  F
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLI----DARF 203

Query: 274 R-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL--------VR 324
           R G +  A  L++ M  +G KP + T+  ++ GLCK    +KA  +F  +        VR
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 325 SDN------------------YK--------PNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           S N                  YK        P+V +++ +I  + +  +M+ A   L  M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           K  GL+P+   YT +I G C+ G+   A  + D M   GC P++  YN +++GLCK+ R+
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A +LL +  +R +  D  T+T L+  + +Q   + AL LF  +++  L PD+  Y +L
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSL 443

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   CR+  + ++ + + +     + P   TY+ +I  +   G +  A  +   M + G 
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+  TY ++I G C+   + +  QF + M    + P  +T  TL + Y K+ +   A  
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFN 563

Query: 599 ILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +   ++K++ +R    T N +I     +  +  A   F  +       DR +  +L N 
Sbjct: 564 VFNIMEKEM-VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 190/386 (49%), Gaps = 4/386 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++G  C +G V+ A + + EM  R V  D  S+  ++  + R G +  A  +L  M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G + D    T++I  FC  G   S+ +A  + +EMV  G  P+V T+  L++GLCK+
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAG---SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQ 380

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A +L L  +      P++ T+T +I GYC++     A  L + +  Q L P+  T
Sbjct: 381 HRLLDAEKL-LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y SLI G C+ G+  +A +L D M      PN   Y+ +ID  C+KG+V++A+  L +  
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++    +  TY  ++  + +    K+      +M +  + PD+  + TLI  + +++ M 
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMH 559

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   F       + P   TY  +I G+   GN+  A + F+ M   G  PD  TY +LI
Sbjct: 560 GAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619

Query: 550 SGLCKQSKLDEACQFYESMIGKGISP 575
           +G        +A Q ++ MI +G +P
Sbjct: 620 NGHVTAGNSKQAFQLHDEMIHRGFAP 645



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 199/400 (49%), Gaps = 5/400 (1%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++AFE    ++             L+  L + GW   A   + +LV S + + N +T   
Sbjct: 104 REAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAY-RLVLSSDSEVNAYTLNI 162

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           M+  YCK  + + A+ ++  M+++ + P+  T+  LI    + G+ + A  L+D M   G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P I  YN+++ GLCK  R  +A E+ +   Q  +  D  ++ IL+    +  E K+A+
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             +  M    + PD+ +++ LI  F R+ +M  +  + +E    GL P    YT +I G+
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G++S A++    M   GC PD +TY  L++GLCKQ +L +A +    M  +G++P  
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            T  TL + YC+QG+   A+ + ++L ++     + T N+LI  +C +  +  A   +  
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462

Query: 635 LLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
           +  ++   + ++ + L ++ C +      F  L + + +G
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 179/654 (27%), Positives = 304/654 (46%), Gaps = 58/654 (8%)

Query: 39  FLANSKQPAFSSTSSSPS---PPQSLVKTVCSMVLESYYQ-QFHLRSSPPRLNLQIDIDS 94
           FL  S +P  SS  + P+   P Q++V  VC+++    ++    L+   P+L        
Sbjct: 22  FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLK------- 74

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE 154
             H  A  V      E+     + FFYW      ++H M  +I     L+ +  F  A  
Sbjct: 75  -AHHVAEIVAVHKDTES----VIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 129

Query: 155 VMQCMVSS-------------FAEIGRLKEGFSM--------------VIE--------M 179
           +   M+ +               EI  +  GFS+              ++E        M
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            N+G+     T N ++ I  + G V  AE +  ++    +  D  +Y  +++ +CR   +
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             A      M+  G   ++ T + LI   C++G    + +A ++LEEM+ KG +P VYT+
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKGIEPTVYTY 306

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T+ I  LC     E+A  L  ++ +    +PNV TYTA+ISG  +  K+  A  L  +M 
Sbjct: 307 TLPITALCAIEHEEEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           ++GL+PNT TY +LI   C  G F  A  +   M   G   N   YN II GLC  G ++
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  L +K  +       +TY  L++ +L +     A  L   M + G  PD   Y  L+
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +  K++ +  +FQE +  GL P   +YT++I G+ +DG +  A+   +RM ++GC 
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  +Y A+I+GL K+++  EA +  + M+ +G+ P  +T  TL    C+ G +  A  I
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              ++K+  +    T ++LI  LC E +   A +   ++  K    D V+  +L
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 197/386 (51%), Gaps = 4/386 (1%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +V  M   G      T   ++     LG +E A  ++ +M   G+  +  +Y  ++   C
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             GR + A +    M   G++ +  T   +I   C     G I++A  L E+M++ G  P
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC---LGGDIEKAMVLFEKMLKMGPLP 441

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
            V T+  LI+G   KG    A RL L L++ +  +P+  TY  ++SG+ K  K+  A   
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            + M E GL PN  +YT+LI GH K G  + A  L+  M + GC PN+ +YNA+I+GL K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           + R  EA ++  K  ++ L  + ITYT L+    +   T+ A  +F  M K    P+++ 
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y++LI   C++ K  E+E   +E    GL P + T+TS+I G++  G I  A    +RM 
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680

Query: 535 QIGCAPDNITYGALISGLCKQSKLDE 560
            +GC P+  TY  L+ GL K+  L E
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 164/329 (49%), Gaps = 5/329 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR      +   M  +G    T T N ++   C  G +E A  +F++M   G      +Y
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  Y   G V  A R L  M + G   D  T   L++ F      G ++ A    +E
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK---WGKLESASFYFQE 503

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G  PN  ++T LIDG  K G  + A  L LK +      PNV +Y A+I+G  KE 
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSL-LKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           + + AE + ++M EQGLLPN  TYT+LI G C+ G  + A+ +   M K  C PN+Y Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I GLC++G+  EA  LLK+  ++ L  D++T+T L+   +       A  L  RMV  
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           G  P+   Y+ L+    ++  + E EK F
Sbjct: 683 GCKPNYRTYSVLLKGLQKECLLLE-EKIF 710


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 189/640 (29%), Positives = 291/640 (45%), Gaps = 64/640 (10%)

Query: 39  FLANSKQP----AFSSTSSS-PSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDID 93
           FL   K P     FSS  +S P P  +    +   VL+       L S+ P      +++
Sbjct: 11  FLLKKKNPLHFLVFSSVPTSYPFPKTTPFPNLVFKVLD-------LISTDPHWPKNPELN 63

Query: 94  SLTHEQAITVVASLAN-EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            L        V+ + N    +  AL FFYW      ++H M  ++     L+ +     A
Sbjct: 64  RLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPA 123

Query: 153 HEVMQCMVSSFAEIGRLKE--GFSMVIEMTNNGL------------------PLITS--- 189
             V   M+ +      LK    F   I  +++GL                   ++TS   
Sbjct: 124 DHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQN 183

Query: 190 ---------------TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
                          T N ++ I C+ G V+ A  VF+++    +C DA +Y  +++ +C
Sbjct: 184 VYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHC 243

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  ++ +A      M+  G   ++ T + LI   C++G    I +A ++LEEM  KG +P
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG---RIGEAMDMLEEMTEKGIEP 300

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK---PNVHTYTAMISGYCKEEKMNRA 351
            VYT+TV I  LC  G  + A    + LVRS   K   P+V TYTA+ISG  +  KM  A
Sbjct: 301 TVYTYTVPISSLCDIGRVDDA----INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +  +M ++GL+PNT TY +LI   C  G F  A  + D M   G   N   YN II G
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L     +++A  +  K  +       +TY  L+ E+LK+     A      M ++   PD
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y  LI+ FC+  K+  +  FF E +  G+ P + TYT+MI GY ++G I  A+  F+
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           RM + GC+    TY A+ISGL K ++  EA +F   M  +G+ P  +T  +L    CK  
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596

Query: 592 DSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMA 628
            +  A  I   ++KK  +    T  +LI  LC E +V  A
Sbjct: 597 ATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 220/482 (45%), Gaps = 37/482 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     GR+ E   M+ EMT  G+     T    +   C++G V+ A  +   M  +G
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG--- 275
                 +Y  ++    R G++  A      ML  G + +  T   LI   C +G  G   
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 276 -----------------------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                         I++A  +  +M++ G  P V T+  LI   
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K+G+   A R FL +++  N +P+  TY  +ISG+CK  K++ A      M + G+ PN
Sbjct: 453 LKRGYLNNATR-FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TYT++I G+CK G  + A  L + M + GC+ +I  YNAII GL K  R  EA +   
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K  ++ LQ + ITYT L++   K   T  A  +F  M K    P+ H YT+LI   C++ 
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+  +E+  +     G  PT +TY++++ G  R+G  + A +  + M + G +P    Y 
Sbjct: 632 KVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYC 687

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           +L+   CK  K+D A + +  M  KG  P       L    C    +  A+ I +SL KK
Sbjct: 688 SLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747

Query: 607 LW 608
            W
Sbjct: 748 QW 749



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 231/524 (44%), Gaps = 52/524 (9%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L + F +   M  +G    + T + ++   C  G +  A ++ +EM  +G+     +Y 
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEE 286
           + + + C +GRV +A   + +M  +G      T T +I+      FR G ++ A  +  +
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL----FRAGKMELAIGMYHK 362

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKG----------W------------------------- 311
           M+++G  PN  T+  LI+ LC +G          W                         
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            EKA  +F K+++ D   P V TY  +I    K   +N A   L  MKE    P+  TY 
Sbjct: 423 IEKAMVVFNKMLK-DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYC 481

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI G CK G  + A      M K G +PN + Y A+IDG CK+G++  A  L ++  + 
Sbjct: 482 ELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
              A   TY  ++S   K     +A     +M + GL P+   YT+LI   C+      +
Sbjct: 542 GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLA 601

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            K F E       P   TYTS+I G  ++G + +A    +R+ + GC P   TY  L+SG
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSG 657

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII-----LESLDKK 606
           LC++ + +EA Q  E+M  KG+SP      +L   +CK      A+ I     ++     
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPH 717

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           L+I  V  LI  LC   R   A   F  LL K  N D +    L
Sbjct: 718 LFIYKV--LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 222/477 (46%), Gaps = 46/477 (9%)

Query: 219 VCADASSYKLMVVAYCR----MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
           + A A   +++++  CR    + RVT+   +L  +    + L   TL    T     G  
Sbjct: 119 ILAPADHVRILMIKACRNEDELKRVTD---FLHGISSSDSGLFGFTLYSFNTLLLQLGKF 175

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  +  ++   G KP++ T   +I+ LCKKG  ++A  +F K+ + D   P+  T
Sbjct: 176 DMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD-LCPDAFT 234

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT++I G+C+  K+++A  + +RM + G  PN+ TY++LI G C  G    A D+++ M 
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT 294

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  P +Y Y   I  LC  GRV +A  L++   ++       TYT ++S   +  + +
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKME 354

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ--------------EAIT 500
            A+G++ +M+K GL P+   Y  LI   C + +   + K F                 I 
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414

Query: 501 AGLF---------------------PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            GLF                     PT  TY ++I   L+ G +++A ++   M +  C 
Sbjct: 415 KGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCE 474

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD  TY  LISG CK  KLD A  F+  M+  GISP + T   +   YCK+G    A+ +
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            E +++      I T N +I  L    R   A  F  K+  +    + ++  +L N 
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 236/524 (45%), Gaps = 46/524 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +SS  +IGR+ +  ++V  M   G      T   ++      G +E A  ++ +M   G+
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG--SI 277
             +  +Y  ++   C  GR   A +    M   G + +  T   +I     KG  G   I
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII-----KGLFGMDDI 423

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  +  +M++ G  P V T+  LI    K+G+   A R FL +++  N +P+  TY  
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR-FLYMMKESNCEPDERTYCE 482

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +ISG+CK  K++ A      M + G+ PN  TYT++I G+CK G  + A  L + M + G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+ +I  YNAII GL K  R  EA +   K  ++ LQ + ITYT L++   K   T  A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 458 GLF----------------------C---------RMVKAGLNPDIHAYTTLIAAFCRQK 486
            +F                      C         R+ + G  P I  Y+TL++  CR+ 
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREG 662

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +  E+ +  +     GL P+ E Y S++  + +   +  A++ F  M   G  P    Y 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI  LC  S+ +EA   ++S++ K  +   +    L     ++GDS   M  L  ++ +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
               +++T I       +VG       K +G DQ  +R+   +L
Sbjct: 783 NCTPSLHTYIILARELSKVG-------KSIGTDQIGNRLREVSL 819



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F + G+L    S   EM   G+     T   ++   C+ G ++ A  +F+ M   G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A   +Y  ++    +  R +EA+++ + M ++G   +  T T LI   C      +  
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK---NTATN 599

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF++  EM +K   PN +T+T LI GLC++G  + A RL       +  +P + TY+ +
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL-----TENGCEPTIDTYSTL 654

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG C+E + N A  L+E MKE+GL P+   Y SL+  HCK    + A ++ +LM  +G 
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGF 714

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ Y  +I  LC   R +EA  + +   +++  +D I +T+L+   L++ ++   + 
Sbjct: 715 QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMK 774

Query: 459 LFCRMVKAGLNPDIHAYTTL 478
               M      P +H Y  L
Sbjct: 775 FLYLMESRNCTPSLHTYIIL 794



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 16/268 (5%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    ++S  ++  R  E      +MT  GL   T T   ++   C+      A ++F E
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  +    +A +Y  ++   C+ G+V  A+R    + + G      T + L++  C +  
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCRE-- 661

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G   +A +L+E M  KG  P++  +  L+   CK    + A  +F  L+    ++P++ 
Sbjct: 662 -GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIF-NLMAVKGFQPHLF 719

Query: 334 TYTAMISGYC----KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            Y  +I   C     EE +N  + LL++     L+     +T L+ G  + G+ +     
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLI----VWTVLVDGLLQEGDSDLCMKF 775

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           + LM    CTP+++ Y  +   L K G+
Sbjct: 776 LYLMESRNCTPSLHTYIILARELSKVGK 803


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 255/552 (46%), Gaps = 46/552 (8%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL+F +W     +++H +  Y    T LI+NG      ++   M+ S   +G       +
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165

Query: 176 VIEMTNN-----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
             +M  +        LI    N ++      GLV+  ++V+ EM    VC +  +Y  MV
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
             YC++G V EA++++S +++ G   D  T T LI  +C    R  +  AF++  EM  K
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ---RKDLDSAFKVFNEMPLK 282

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---------------------- 328
           G + N   +T LI GLC     ++A  LF+K+   + +                      
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342

Query: 329 ------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                       KPN+HTYT +I   C + K  +A  LL +M E+GL+PN  TY +LI G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +CK G  E A D+++LM     +PN   YN +I G C K  V +A  +L K  +R++  D
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPD 461

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY  L+    +      A  L   M   GL PD   YT++I + C+ K+++E+   F 
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                G+ P    YT++I GY + G +  A    ++M    C P+++T+ ALI GLC   
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
           KL EA    E M+  G+ P   T   L +   K GD   A    + +     K    T  
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641

Query: 614 TLIRKLCSEKRV 625
           T I+  C E R+
Sbjct: 642 TFIQTYCREGRL 653



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 231/493 (46%), Gaps = 27/493 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S     R  E  ++V EM   G+     T   ++   C     E A E+  +M  +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  YC+ G + +A   +  M  R    +  T   LI  +C    + ++ 
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC----KSNVH 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L +M+ +   P+V T+  LIDG C+ G  + A+RL L L+      P+  TYT+M
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWTYTSM 503

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK +++  A  L + ++++G+ PN   YT+LI G+CK G  + A+ +++ M  + C
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +NA+I GLC  G+++EA  L +K  +  LQ    T TIL+   LK  +   A  
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M+ +G  PD H YTT I  +CR+ ++ ++E    +    G+ P   TY+S+I GY 
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISG---------------LCKQSKL---DE 560
             G  + A    +RM   GC P   T+ +LI                 LC  S +   D 
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLI 616
             +  E M+   ++P   +   L    C+ G+   A  + + + +   I       N L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803

Query: 617 RKLCSEKRVGMAA 629
              C  K+   AA
Sbjct: 804 SCCCKLKKHNEAA 816



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 201/416 (48%), Gaps = 18/416 (4%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE--------EMVRKGWKPNVY 297
           L+ +++ G +     + LL+   CD     S+  A  +L+        E     +K  + 
Sbjct: 130 LTLLINNGYVGVVFKIRLLMIKSCD-----SVGDALYVLDLCRKMNKDERFELKYKLIIG 184

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            +  L++ L + G  ++  +++++++  D   PN++TY  M++GYCK   +  A   + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLE-DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           + E GL P+  TYTSLI G+C+  + + A+ + + M  +GC  N  AY  +I GLC   R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA +L  K    E      TYT+L+          +AL L   M + G+ P+IH YT 
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI + C Q K +++ +   + +  GL P   TY ++I GY + G I  AV   + M    
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            +P+  TY  LI G CK S + +A      M+ + + P  VT  +L    C+ G+  +A 
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 598 IILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +L  ++ +  +    T  ++I  LC  KRV  A   F  L  K  N + V   AL
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 26/419 (6%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G     + ++  M + GL     T   ++   C+   VE A ++FD +  +GV  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC+ G+V EA   L  ML +  + ++ T   LI   C  G    +K+A  L E+
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG---KLKEATLLEEK 592

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+ G +P V T T+LI  L K G  + A+  F +++ S   KP+ HTYT  I  YC+E 
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREG 651

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  AE ++ +M+E G+ P+  TY+SLI G+  +G    A+D++  M   GC P+ + + 
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711

Query: 407 AIIDGLC------KKGRVQE------------AYELLKKAFQRELQADKITYTILLSEHL 448
           ++I  L       +KG   E              ELL+K  +  +  +  +Y  L+    
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771

Query: 449 KQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +    + A  +F  M +  G++P    +  L++  C+ KK  E+ K   + I  G  P  
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           E+   +ICG  + G        FQ + Q G   D + +  +I G+ KQ  L EA  FYE
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG-LVEA--FYE 887



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 162/381 (42%), Gaps = 42/381 (11%)

Query: 137 IVCATSLISN----GNFERAHEVMQCMVS--------SFAEI-------GRLKEGFSMVI 177
           +V  T+LI      G  + AH +++ M+S        +F  +       G+LKE   +  
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   GL    ST   ++    + G  ++A   F +M + G   DA +Y   +  YCR G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ +A+  ++ M + G   D  T + LI  +   G  G    AF++L+ M   G +P+ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 298 THTVLIDGLCKKGWTEK------------------AFRLFLKLVRSDNYKPNVHTYTAMI 339
           T   LI  L +  + ++                     L  K+V   +  PN  +Y  +I
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH-SVTPNAKSYEKLI 767

Query: 340 SGYCKEEKMNRAEMLLERM-KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            G C+   +  AE + + M + +G+ P+   + +L+   CK+     A  ++D M   G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P + +   +I GL KKG  +    + +   Q     D++ + I++    KQ   +    
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
           LF  M K G       Y+ LI
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLI 908


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 242/473 (51%), Gaps = 16/473 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + Q ++ +  E  R+ E   ++ +M          T N V+   C  G +  A ++ D M
Sbjct: 242 IYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRM 301

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   DA +Y  ++   CRMG+V EA   L+ + +   +L N  ++  + +       
Sbjct: 302 LLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVAS------- 354

Query: 275 GSIKQAFELL-EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G  ++A +LL   MV  G++P+ YT  ++IDGL KKG+   A  L  ++V +  ++PNV 
Sbjct: 355 GRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV-AKRFEPNVI 413

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYT +I+G+CK+ ++  A  ++  M  +GL  NT  Y  LI   CK GN E A  L   M
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +GC P+IY +N++I+GLCK  +++EA  L    F   + A+ +TY  L+   L +   
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +QA  L   M+  G   D   Y  LI A C+   +++    F+E +  G+FPT  +   +
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  R G ++ A+K+ Q M   G  PD +TY +LI+GLCK   + EA   +  +  +GI
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL------WIRTVNTLIRKL 619
            P  +T  TL   +C +G    A ++L + +D         W   +N +++K+
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKI 706



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 232/502 (46%), Gaps = 17/502 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M + G+     T   V+   C +  V+ A  +  +M   G   ++  Y+ ++ A C   
Sbjct: 195 DMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENN 254

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV+EA + L  M       D  T   +I   C  G    I +A +LL+ M+ +G+  +  
Sbjct: 255 RVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAG---RIHEAAKLLDRMLLRGFSTDAL 311

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLE 356
           T+  L+ GLC+ G  ++A  L  K+       PN   Y  +ISGY    +   A ++L  
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIP-----NPNTVLYNTLISGYVASGRFEEAKDLLYN 366

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G  P+  T+  +I G  K G    A +L++ M  +   PN+  Y  +I+G CK+G
Sbjct: 367 NMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQG 426

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R++EA E++     + L  + + Y  L+    K    ++AL LF  M   G  PDI+ + 
Sbjct: 427 RLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFN 486

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   C+  KM+E+   + +    G+     TY +++  +L   +I  A K    M   
Sbjct: 487 SLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFR 546

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC  DNITY  LI  LCK   +++    +E M+GKGI P  ++   L    C+ G    A
Sbjct: 547 GCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDA 606

Query: 597 MIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KN 652
           +  L+ +  +     I T N+LI  LC    V  A+  F+KL  +    D ++   L   
Sbjct: 607 LKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISR 666

Query: 653 ACYESNKYALFSDLSQRIAEGI 674
            C+E     +F+D    + +G+
Sbjct: 667 HCHE----GMFNDACLLLYKGV 684



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 187/410 (45%), Gaps = 21/410 (5%)

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW--- 292
           +G     ++ L  M D G +   +   L++  +   G  G   QA  LL +M    W   
Sbjct: 112 VGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPG---QATRLLLDM----WGVY 164

Query: 293 --KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              P   ++ V++D L        A  +F  ++ S    P V+T+  ++   C   +++ 
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDML-SRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  LL  M + G +PN+  Y +LI+  C+      A  L++ M    C P++  +N +I 
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC+ GR+ EA +LL +   R    D +TY  L+    +  +  +A  L  ++     NP
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NP 339

Query: 471 DIHAYTTLIAAFCRQKKMKESEK-FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           +   Y TLI+ +    + +E++   +   + AG  P   T+  MI G ++ G + SA++ 
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M      P+ ITY  LI+G CKQ +L+EA +   SM  KG+S   V    L    CK
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459

Query: 590 QGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            G+   A+ +   +  K     I T N+LI  LC   ++  A   +H + 
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 179/654 (27%), Positives = 303/654 (46%), Gaps = 58/654 (8%)

Query: 39  FLANSKQPAFSSTSSSPS---PPQSLVKTVCSMVLESYYQ-QFHLRSSPPRLNLQIDIDS 94
           FL  S +P  SS  + P+   P Q++V  VC+++    ++    L+   P+L        
Sbjct: 64  FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLK------- 116

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE 154
             H  A  V      E+     + FFYW      ++H M  +I     L+ +  F  A  
Sbjct: 117 -AHHVAEIVAVHKDTES----VIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 171

Query: 155 VMQCMVSS-------------FAEIGRLKEGFSM--------------VIE--------M 179
           +   M+ +               EI  +  GFS+              ++E        M
Sbjct: 172 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 231

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            N+G+     T N ++ I  + G V  AE +  ++    +  D  +Y  +++ +CR   +
Sbjct: 232 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 291

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             A      M+  G   ++ T + LI   C++G    + +A ++LEEM+ KG +P VYT+
Sbjct: 292 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKGIEPTVYTY 348

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T+ I  LC     E+A  L  ++ +    +PNV TYTA+ISG  +  K+  A  L  +M 
Sbjct: 349 TLPITALCAIEHEEEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           ++GL+PNT TY +LI   C  G F  A  +   M   G   N   YN II GLC  G ++
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 467

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  L +K  +       +TY  L++ +L +     A  L   M + G  PD   Y  L+
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +  K++ +  +FQE +  GL P   +YT++I G+ +DG +  A+   +RM ++GC 
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  +Y A+I+GL K+++  EA +  + M  +G+ P  +T  TL    C+ G +  A  I
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              ++K+  +    T ++LI  LC E +   A +   ++  K    D V+  +L
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 18/487 (3%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR      +   M  +G    T T N ++   C  G +E A  +F++M   G      +Y
Sbjct: 429 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 488

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  Y   G V  A R L  M + G   D  T   L++ F      G ++ A    +E
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK---WGKLESASFYFQE 545

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G  PN  ++T LIDG  K G  + A  L L+ +      PNV +Y A+I+G  KE 
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSL-LERMEEMGCNPNVESYNAVINGLSKEN 604

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           + + AE + ++M EQGLLPN  TYT+LI G C+ G  + A+ +   M K  C PN+Y Y+
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 664

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I GLC++G+  EA  LLK+  ++ L  D++T+T L+   +       A  L  RMV  
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV 724

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P+   Y+ L+    ++  + E +   Q        P +           +D N    
Sbjct: 725 GCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE-----------KDVNFEIV 773

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
                RM++IGC P   TY  L+SGLC++ +  EA Q  + M  +G  P      +L   
Sbjct: 774 SNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 833

Query: 587 YCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +CK  +   A+ I  S++ K   L +     LI  LC   +V  A   F  +L K+ N D
Sbjct: 834 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 893

Query: 644 RVSLAAL 650
            +    L
Sbjct: 894 EIVWTVL 900



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 191/414 (46%), Gaps = 28/414 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +VS F++ G+L+       EM   GL     +   ++    + G V+ A  + + M   G
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY  ++    +  R +EA++    M ++G + +  T T LI   C  G     +
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG---RTQ 642

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF++  +M ++   PN+YT++ LI GLC++G  ++A  + LK +      P+  T+T++
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEVTFTSL 701

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG---------------------- 376
           I G+    +++ A +LL RM + G  PN  TY+ L+ G                      
Sbjct: 702 IDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761

Query: 377 --HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             H K  NFE   +L+  M + GC P +  Y+ ++ GLC+KGR  EA +L+K   +R   
Sbjct: 762 SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 821

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D+  Y  LL  H K  E   AL +F  +   G    +  Y  LI A C+  +++E++  
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           F   +       +  +T ++ G L++G +   +K    M      P+  TY  L
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 161/362 (44%), Gaps = 26/362 (7%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++  ++  R  E   +  +M   GL     T   ++   C  G  ++A ++F +
Sbjct: 591 ESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 650

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  R    +  +Y  ++   C+ G+  EA+  L  M  +G   D  T T LI  F     
Sbjct: 651 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV---V 707

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK--------GWTEKAFRLFLKLVRS 325
            G I  AF LL  MV  G KPN  T++VL+ GL K+            +A   F    + 
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKD 767

Query: 326 DNYK---------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            N++               P + TY+ ++SG C++ +   AE L++ MKE+G  P+   Y
Sbjct: 768 VNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 827

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            SL+  HCK    + A  +   +  +G   ++  Y A+I  LCK G+V+EA  L     +
Sbjct: 828 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 887

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +E  AD+I +T+L+   LK+ E    + L   M      P+I  Y  L     R  K  E
Sbjct: 888 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIE 947

Query: 491 SE 492
           SE
Sbjct: 948 SE 949



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           +++  M+  G      T + +V   C  G    AE++  +M  RG C D   Y  +++A+
Sbjct: 775 NLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH 834

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C+   V  A +   ++  +G  L  +    LI A C  G    +++A  L + M+ K W 
Sbjct: 835 CKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG---QVEEAQALFDNMLEKEWN 891

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            +    TVL+DGL K+G  +   +L L ++ S N+ PN+ TY  +     +  K   +E 
Sbjct: 892 ADEIVWTVLVDGLLKEGELDLCMKL-LHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 950

Query: 354 LLERMK 359
           L +++K
Sbjct: 951 LADKLK 956



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 4/187 (2%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E    +   M   G      +Y  +V   CR GR  EA++ +  M +RG   D      L
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           + A C       +  A ++   +  KG++ ++  +  LI  LCK G  E+A  LF  ++ 
Sbjct: 831 LIAHCKNL---EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 887

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            + +  +   +T ++ G  KE +++    LL  M+ +   PN  TY  L     ++G   
Sbjct: 888 KE-WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSI 946

Query: 385 RAYDLMD 391
            +  L D
Sbjct: 947 ESEPLAD 953


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 259/562 (46%), Gaps = 46/562 (8%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL+F +W     +++H +  Y    T LI+NG      ++   M+ S   +        +
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDL 165

Query: 176 VIEMTNN-----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
             +M  +        LI    N ++      GLV+  ++V+ EM    VC +  +Y  MV
Sbjct: 166 CRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
             YC++G V EA++++S +++ G   D  T T LI  +C    R  +  AF++ +EM  K
Sbjct: 226 NGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQ---RKDLDSAFKVFKEMPLK 282

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---------------------- 328
           G + N   +T LI GLC +   ++A  LF+K+   D Y                      
Sbjct: 283 GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEA 342

Query: 329 ------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                       KPN+HTYT +I   C + K+ +A  LL +M E+GL+PN  TY +LI G
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +CK G  E A D+++LM      PN   YN +I G CK+  V +A  +L K  +R++  D
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPD 461

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY  L+    +      A  L   M   GL PD   YT++I + C+ K+++E+   F 
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                 + P    YT++I GY + G ++ A    ++M    C P+++T+ ALI GLC   
Sbjct: 522 SLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDG 581

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
           KL EA    E M+   + P   T   L +   K GD   A    + +     K    T  
Sbjct: 582 KLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYT 641

Query: 614 TLIRKLCSEKRVGMAALFFHKL 635
           T I+  C E R+  A     K+
Sbjct: 642 TFIQTYCREGRLQDAEDMVAKM 663



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 230/472 (48%), Gaps = 23/472 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  E  ++V EM   G+     T   ++   C    +E A E+  +M  +G+  +  +Y 
Sbjct: 338 RKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYN 397

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  YC+ G + +A   +  M  R    +  T   LI  +C +    ++ +A  +L +M
Sbjct: 398 ALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR----NVHKAMGVLNKM 453

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           + +   P+V T+  LIDG C+ G  + A+RL L L+      P+  TYT+MI   CK ++
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDPWTYTSMIDSLCKSKR 512

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  L + ++++ ++PN   YT+LI G+CK G    A+ +++ M  + C PN   +NA
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I GLC  G+++EA  L +K  + +LQ    T TIL+   LK  +   A   F +M+ +G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD H YTT I  +CR+ +++++E    +    G+ P   TY+S+I GY   G  +SA 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 528 KYFQRMNQIGCAPDNITYGALI---------------SGLCKQSKL---DEACQFYESMI 569
              +RM+  GC P   T+ +LI                G+C  S +   D   +  E M+
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
             G++P   +   L    C+ G+   A  + + + +K  I     +   L S
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 231/503 (45%), Gaps = 41/503 (8%)

Query: 136 YIVCATSLISNGNFERAHEVM---------------QCMVSSFAEIGRLKEGFSMVIEMT 180
           Y V   SL S    E+A E++                 +++ + + G +++   +V  M 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           +  L   T T N ++   C+   V  A  V ++M  R V  D  +Y  ++   CR G   
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            A R LS M DRG + D  T T +I + C K  R  +++A +L + + +K   PNV  +T
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLC-KSKR--VEEACDLFDSLEQKDVIPNVVMYT 536

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LIDG CK G   +A  L L+ + S N  PN  T+ A+I G C + K+  A +L E+M +
Sbjct: 537 ALIDGYCKAGKVNEA-HLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L P  +T T LI+   K G+F+ AY     M   G  P+ + Y   I   C++GR+Q+
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQD 655

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +++ K  +  +  D  TY+ L+  +     T  A  +  RM   G  P  H + +LI 
Sbjct: 656 AEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715

Query: 481 AFCRQK--KMKESE----------------KFFQEAITAGLFPTKETYTSMICGYLRDGN 522
                K  K+K  E                +  ++ +  G+ P  ++Y  ++ G    GN
Sbjct: 716 HLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN 775

Query: 523 ISSAVKYFQRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-CEVTR 580
           +  A K F  M Q  G +P  + + AL+S  CK  K +EA +  + MI  G  P  E  +
Sbjct: 776 LRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835

Query: 581 VTLAYEYCKQGDSATAMIILESL 603
           + +   Y K+G+      + ++L
Sbjct: 836 ILICRLY-KKGEKERGTSVFQNL 857



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 15/397 (3%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D+   TL +   C K  +    ++FEL  +++       +  +  L++ L + G  ++  
Sbjct: 154 DSVADTLFVLDLCRKMNK---DESFELKYKLI-------IGCYNTLLNSLARFGLVDEMK 203

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           +++++++  D   PN++TY  M++GYCK   +  A   +  + E GL P+  TYTSLI G
Sbjct: 204 QVYMEMLE-DKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMG 262

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +C+  + + A+ +   M  +GC  N  AY  +I GLC + R+ EA +L  K    +    
Sbjct: 263 YCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPT 322

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TYT+L+          +AL L   M + G+ P+IH YT LI + C Q K++++ +   
Sbjct: 323 VRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLG 382

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + +  GL P   TY ++I GY + G I  A+   + M      P+  TY  LI G CK++
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN 442

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVN 613
            + +A      M+ + + P  VT  +L    C+ G+  +A  +L  ++ +  +    T  
Sbjct: 443 -VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYT 501

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           ++I  LC  KRV  A   F  L  KD   + V   AL
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 197/419 (47%), Gaps = 26/419 (6%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G     + ++  M + GL     T   ++   C+   VE A ++FD +  + V  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC+ G+V EA   L  ML +  + ++ T   LI   C  G    +K+A  L E+
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDG---KLKEATLLEEK 592

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+   +P V T T+LI  L K G  + A+R F +++ S   KP+ HTYT  I  YC+E 
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT-KPDAHTYTTFIQTYCREG 651

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  AE ++ +MKE G+ P+  TY+SLI G+  +G    A+ ++  M   GC P+ + + 
Sbjct: 652 RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFL 711

Query: 407 AIID---------------GLCKKGRVQE---AYELLKKAFQRELQADKITYTILLSEHL 448
           ++I                G+C    + E     ELL+K  +  +  +  +Y  L+    
Sbjct: 712 SLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771

Query: 449 KQAETKQALGLFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +    + A  +F  M  K G++P    +  L++  C+ +K  E+ K   + I  G  P  
Sbjct: 772 EIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQL 831

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           E+   +IC   + G        FQ + Q G   D + +  +I G+ KQ  L EA  FYE
Sbjct: 832 ESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQG-LVEA--FYE 887



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 133/328 (40%), Gaps = 50/328 (15%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+LKE   +  +M    L    ST   ++    + G  ++A   F +M + G   DA +Y
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------- 272
              +  YCR GR+ +A+  ++ M + G   D  T + LI  + D G              
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700

Query: 273 ---------FRGSIKQ---------------------------AFELLEEMVRKGWKPNV 296
                    F   IK                              ELLE+MV  G  PN 
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNA 760

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            ++  L+ G+C+ G    A ++F  + + +   P+   + A++S  CK EK N A  +++
Sbjct: 761 KSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVD 820

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G LP   +   LI    K G  ER   +   + + G   +  A+  IIDG+ K+G
Sbjct: 821 DMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQG 880

Query: 417 RVQEAYELLKKAFQRELQADKITYTILL 444
            V+  YEL     +        TY++L+
Sbjct: 881 LVEAFYELFNVMEKNGCTFSSQTYSLLI 908


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 224/465 (48%), Gaps = 39/465 (8%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  +G+     T N ++   C+   +    E+F+E+  RG   D  +Y  ++ + C+ G
Sbjct: 71  EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PN 295
            + EA R    M  RG + +  T ++LI   C  G    I +A EL++EM RK     PN
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG---RIDEARELIQEMTRKSCDVLPN 187

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKL------VRSD----------------------- 326
           + T+   +DGLCK+  T +A  L   L      V  D                       
Sbjct: 188 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND 247

Query: 327 -----NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
                 Y PNV TY A+++G CK +KM RA  ++E M ++G+ P+  TY+ L+   CK  
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A +L+  M   GCTPN+  +N+IIDGLCK  R  EA+++  + + R L  DK+T+ 
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   K    +QA  LF  MV   + PD+  +  LI   C+  +++ +          
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY  ++ G  + G I    ++ + M   GC P+++TYG+L+  LC+ S+ D+A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            Q    +   G  P  VT   L     K G +  A+ +LE +  K
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 532



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 182/363 (50%), Gaps = 6/363 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T T + ++   C+ G  +  E   D+M A G   +  +Y  +V   C+  ++  A   + 
Sbjct: 225 TVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +M+D+G   D  T ++L+ AFC K  R  + +A ELL  M  +G  PNV T   +IDGLC
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFC-KASR--VDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K   + +AF++ L+ V +    P+  T+  +I+G CK     +A  L E M  + + P+ 
Sbjct: 340 KSDRSGEAFQIALQ-VYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+ +LI G CK G  E A D++DLMG  G  PN+  YN ++ GLCK GR++E  E L++
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   + +TY  L+    + + T  AL L  ++   G +PD   Y  L+    +  K
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            +++    +E +  G  P   T+ +   G  R GN++  ++  + +   G  PD  T  +
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 578

Query: 548 LIS 550
           ++ 
Sbjct: 579 ILD 581



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 197/422 (46%), Gaps = 12/422 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  + G L+E   +   M++ G      T + ++   C++G ++ A E+  EM  + 
Sbjct: 122 LIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 181

Query: 219 --VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL--DNATLTLLITAFCDKGFR 274
             V  +  +Y   +   C+     EA   + ++ D    +  D  T + LI   C  G  
Sbjct: 182 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG-- 239

Query: 275 GSIKQAFELL-EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
               Q  E   ++M+  G+ PNV T+  L++GLCK    E+A  +   +V      P+V 
Sbjct: 240 ----QTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVI 294

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+ ++  +CK  +++ A  LL  M  +G  PN  T+ S+I G CK      A+ +   +
Sbjct: 295 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                 P+   +N +I G CK G  ++A  L ++   + +Q D +T+  L+    K  + 
Sbjct: 355 YNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  +   M   G+ P++  Y  L+   C+  +++E  +F +E +++G  P   TY S+
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +    R      A++   ++   G  PD +TY  L+ GL K  K ++A    E M+GKG 
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 534

Query: 574 SP 575
            P
Sbjct: 535 QP 536



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 11/380 (2%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V  + +++  LC+ G T +A  +F   +  D   P + TY  +I+G CK  ++     L
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            E + ++G  P+  TY +LI   CK G+ E A  L   M   GC PN+  Y+ +I+GLCK
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 415 KGRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG---LN 469
            GR+ EA EL+++  ++  ++  + ITY   L    KQ+ T +A  L  R ++ G   ++
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVS 222

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD   ++TLI   C+  +  E+     + I  G  P   TY +++ G  +   +  A   
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            + M   G  PD ITY  L+   CK S++DEA +    M  +G +P  VT  ++    CK
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340

Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
              S  A  I   +  ++ +    T N LI   C       A+  F +++ K+   D ++
Sbjct: 341 SDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMT 400

Query: 647 LAALKNACYESNKYALFSDL 666
             AL +   ++ +     D+
Sbjct: 401 FGALIDGLCKAGQVEAARDI 420



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 201/423 (47%), Gaps = 14/423 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEM-- 214
           +++   ++GR+ E   ++ EMT     ++ +  T N  +   C+  +   A E+   +  
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKG 272
            +  V  D  ++  ++   C+ G+  EA      M+  G + +  T   L+   C  DK 
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADK- 273

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++A  ++E MV KG  P+V T++VL+D  CK    ++A  L L  + S    PNV
Sbjct: 274 ----MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL-LHGMASRGCTPNV 328

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+ ++I G CK ++   A  +  ++  + L+P+  T+  LI G CK GNFE+A  L + 
Sbjct: 329 VTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +   P++  + A+IDGLCK G+V+ A ++L       +  + +TY +L+    K   
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++       MV +G  P+   Y +L+ A CR  +  ++ +   +  + G  P   TY  
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G  + G    A+   + M   G  PD+ T+ A   GL +   L    +    ++ KG
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568

Query: 573 ISP 575
           + P
Sbjct: 569 MLP 571



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 4/252 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  R  E F + +++ N  L     T N ++  AC+ G  E A  +F+EM A+ 
Sbjct: 334 IIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  ++  ++   C+ G+V  A   L  M + G   +  T  +L+   C  G    I+
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG---RIE 450

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  E LEEMV  G  P   T+  L+  LC+   T+ A +L  KL +S  + P+  TY  +
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL-KSFGWDPDTVTYNIL 509

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G  K  K  +A  +LE M  +G  P++ T+ +   G  + GN     +L+ ++  +G 
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGM 569

Query: 399 TPNIYAYNAIID 410
            P+    ++I+D
Sbjct: 570 LPDATTCSSILD 581


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV +    G  +   ++V  M + GL     T N V+   C  G+ + A EVF EM   G
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  S+ +++  +CR+G + EA +    M  RG   D  + + LI  F     RG + 
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR---RGKMD 313

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   L EM   G  P+   +T++I G C+ G    A R+  ++V      P+V TY  +
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTL 372

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CKE ++  AE LL  M+E+G+ P+  T+T+LI+G+C  G  ++A  L D M  +  
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDG+C++G + +A +L      RE+  + +TY+IL+  H ++ + + A G
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M+  G+ P+I  Y ++I  +CR   + + +KF Q+ +   + P   TY ++I GY+
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++  +  A K    M +    PD +TY  LI+G      + EA   +E M  KGI P   
Sbjct: 553 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 612

Query: 579 TRVTLAYEYCKQGDSATA 596
           T +++   +   G+S  A
Sbjct: 613 TYMSMINGHVTAGNSKEA 630



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 11/489 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T TLN +V   C+    +  + V  EM  R V  D  ++ +MV A  R G    A   + 
Sbjct: 156 TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 215

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +M+ +G      T   ++   C  G      +A+E+ +EM   G  P+V + T+LI G C
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGM---WDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  E+A +++ K +R    KP++ +++ +I  + +  KM+ A   L  M+  GL+P+ 
Sbjct: 273 RVGEIEEALKIY-KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             YT +I G C+ G    A  + D M   GC P++  YN +++GLCK+ R+ +A  LL +
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +R +  D  T+T L+  +  + +  +AL LF  M+   L PDI  Y TLI   CRQ  
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + ++   + +  +  +FP   TY+ +I  +   G +  A  +   M   G  P+ +TY +
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +I G C+   + +  +F + M+   +SP  +T  TL + Y K+     A  +L  ++K+ 
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 608 W---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACYESNKY 660
               + T N LI        V  A   F K+  K    DR +  ++ N    A      +
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 661 ALFSDLSQR 669
            L  ++ QR
Sbjct: 632 QLHDEMLQR 640



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 194/384 (50%), Gaps = 4/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  +G ++E   +  EM + G+     + + ++G+    G +++A     EM   G
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y +++  +CR G +++A R    M+  G + D  T   L+   C +     + 
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER---RLL 383

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL EM  +G  P++ T T LI G C +G  +KA +LF  ++ +   +P++ TY  +
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML-NQRLRPDIVTYNTL 442

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C++  +++A  L + M  + + PN  TY+ LI  HC+ G  E A+  +D M  +G 
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  YN+II G C+ G V +  + L+K    ++  D ITY  L+  ++K+ +   A  
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M K  + PD+  Y  LI  F     ++E+   F++    G+ P + TY SMI G++
Sbjct: 563 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 622

Query: 519 RDGNISSAVKYFQRMNQIGCAPDN 542
             GN   A +    M Q G APD+
Sbjct: 623 TAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 205/409 (50%), Gaps = 4/409 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G   + + +  EM + G+     +   ++G  C +G +E A +++ EM  RG+  D  S+
Sbjct: 240 GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 299

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  + R G++  A  +L  M   G + D    T++I  FC  G    +  A  + +E
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL---MSDALRVRDE 356

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G  P+V T+  L++GLCK+     A  L L  +R     P++ T+T +I GYC E 
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL-LNEMRERGVPPDLCTFTTLIHGYCIEG 415

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+++A  L + M  Q L P+  TY +LI G C+ G+ ++A DL D M      PN   Y+
Sbjct: 416 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +ID  C+KG+V++A+  L +   + +  + +TY  ++  + +     +      +M+  
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++PD+  Y TLI  + ++ KM ++ K         + P   TY  +I G+   GN+  A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              F++M   G  PD  TY ++I+G        EA Q ++ M+ +G +P
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 176/348 (50%), Gaps = 4/348 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  FA  G++    + + EM   GL         V+G  C  GL+  A  V DEM   
Sbjct: 301 CLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 360

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++   C+  R+ +A+  L+ M +RG   D  T T LI  +C     G +
Sbjct: 361 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC---IEGKL 417

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A +L + M+ +  +P++ T+  LIDG+C++G  +KA  L+  +  S    PN  TY+ 
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSI 476

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I  +C++ ++  A   L+ M  +G+LPN  TY S+I G+C+ GN  +    +  M    
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P++  YN +I G  K+ ++ +A++LL    + ++Q D +TY +L++        ++A 
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +F +M   G+ PD + Y ++I         KE+ +   E +  G  P
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 192/371 (51%), Gaps = 5/371 (1%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + GW   A   + +LV S N + N +T   M+  YCK  + ++ + ++  M+++ + P+ 
Sbjct: 133 RAGWPHLAADAY-RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 191

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+  ++    + G+ E A  L+D M  +G  P I  YN+++ GLC+ G   +A+E+ K+
Sbjct: 192 VTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                +  D  ++TIL+    +  E ++AL ++  M   G+ PD+ +++ LI  F R+ K
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           M  +  + +E    GL P    YT +I G+ R G +S A++    M   GC PD +TY  
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES-LDKK 606
           L++GLCK+ +L +A      M  +G+ P   T  TL + YC +G    A+ + ++ L+++
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431

Query: 607 LW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALF 663
           L   I T NTLI  +C +  +  A   +  +  ++   + V+ + L ++ C +      F
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491

Query: 664 SDLSQRIAEGI 674
             L + I +GI
Sbjct: 492 GFLDEMINKGI 502


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV +    G  +   ++V  M + GL     T N V+   C  G+ + A EVF EM   G
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  S+ +++  +CR+G + EA +    M  RG   D  + + LI  F     RG + 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR---RGKMD 252

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   L EM   G  P+   +T++I G C+ G    A R+  ++V      P+V TY  +
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTL 311

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CKE ++  AE LL  M+E+G+ P+  T+T+LI+G+C  G  ++A  L D M  +  
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDG+C++G + +A +L      RE+  + +TY+IL+  H ++ + + A G
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M+  G+ P+I  Y ++I  +CR   + + +KF Q+ +   + P   TY ++I GY+
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++  +  A K    M +    PD +TY  LI+G      + EA   +E M  KGI P   
Sbjct: 492 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 551

Query: 579 TRVTLAYEYCKQGDSATA 596
           T +++   +   G+S  A
Sbjct: 552 TYMSMINGHVTAGNSKEA 569



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 235/492 (47%), Gaps = 11/492 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T TLN +V   C+    +  + V  EM  R V  D  ++ +MV A  R G    A   + 
Sbjct: 95  TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 154

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +M+ +G      T   ++   C  G      +A+E+ +EM   G  P+V + T+LI G C
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGM---WDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  E+A +++ K +R    KP++ +++ +I  + +  KM+ A   L  M+  GL+P+ 
Sbjct: 212 RVGEIEEALKIY-KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             YT +I G C+ G    A  + D M   GC P++  YN +++GLCK+ R+ +A  LL +
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +R +  D  T+T L+  +  + +  +AL LF  M+   L PDI  Y TLI   CRQ  
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + ++   + +  +  +FP   TY+ +I  +   G +  A  +   M   G  P+ +TY +
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +I G C+   + +  +F + M+   +SP  +T  TL + Y K+     A  +L  ++K+ 
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 608 W---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACYESNKY 660
               + T N LI        V  A   F K+  K    DR +  ++ N    A      +
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570

Query: 661 ALFSDLSQRIAE 672
            L  ++ QR  E
Sbjct: 571 QLHDEMLQRGKE 582



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 192/371 (51%), Gaps = 5/371 (1%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + GW   A   + +LV S N + N +T   M+  YCK  + ++ + ++  M+++ + P+ 
Sbjct: 72  RAGWPHLAADAY-RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 130

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+  ++    + G+ E A  L+D M  +G  P I  YN+++ GLC+ G   +A+E+ K+
Sbjct: 131 VTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                +  D  ++TIL+    +  E ++AL ++  M   G+ PD+ +++ LI  F R+ K
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           M  +  + +E    GL P    YT +I G+ R G +S A++    M   GC PD +TY  
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES-LDKK 606
           L++GLCK+ +L +A      M  +G+ P   T  TL + YC +G    A+ + ++ L+++
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370

Query: 607 LW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALF 663
           L   I T NTLI  +C +  +  A   +  +  ++   + V+ + L ++ C +      F
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 430

Query: 664 SDLSQRIAEGI 674
             L + I +GI
Sbjct: 431 GFLDEMINKGI 441



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 175/345 (50%), Gaps = 4/345 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  FA  G++    + + EM   GL         V+G  C  GL+  A  V DEM   
Sbjct: 240 CLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 299

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++   C+  R+ +A+  L+ M +RG   D  T T LI  +C     G +
Sbjct: 300 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC---IEGKL 356

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A +L + M+ +  +P++ T+  LIDG+C++G  +KA  L+  +  S    PN  TY+ 
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM-HSREIFPNHVTYSI 415

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I  +C++ ++  A   L+ M  +G+LPN  TY S+I G+C+ GN  +    +  M    
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P++  YN +I G  K+ ++ +A++LL    + ++Q D +TY +L++        ++A 
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
            +F +M   G+ PD + Y ++I         KE+ +   E +  G
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 4/292 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL +   ++ EM   G+P    T   ++   C  G ++ A ++FD M  + +  D  +Y 
Sbjct: 320 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 379

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   CR G + +A+     M  R    ++ T ++LI + C+KG    ++ AF  L+EM
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG---QVEDAFGFLDEM 436

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           + KG  PN+ T+  +I G C+ G   K  + FL+ +  +   P++ TY  +I GY KE+K
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A  LL  M+++ + P+  TY  LI G    GN + A  + + M  +G  P+ Y Y +
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           +I+G    G  +EA++L  +  QR  +  +   T+        AE+ + + +
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPM 607


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 226/452 (50%), Gaps = 12/452 (2%)

Query: 145 SNGNFE-----RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           ++G F+     R +  +   +S F  I  +K   ++ +E+ NN +     T N +V   C
Sbjct: 149 ADGEFKFKPTLRCYNTILMSLSKFLLIDEMK---TVYLELLNNQISPNIYTFNAMVNGYC 205

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           ++G V  AE    ++   G+  D  +Y  +++ +CR   V  A      M  +G   +  
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEV 265

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           + T LI   C+ G    I +A +L  +M      P V T+TVLI  L   G   +A  LF
Sbjct: 266 SYTNLIHGLCEAG---RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++ +    +PNVHTYT +I G CKE KM+ A  +L  M E+GL+P+  TY +LI G+CK
Sbjct: 323 NEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  + A++++DLM    C PN   YN +I GLCKK +V +A  LL K  +R+L    IT
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+    K  + + A  L   M + GL PD   Y+  I   C++ +++E+   F    
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+   +  YT++I GY + G I  A    +RM    C P++ TY  LI GLCK+ K+ 
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           EA      M+  G+ P  VT   L  E  K G
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 228/441 (51%), Gaps = 8/441 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            S  N + G+ CE G +  A ++F +M     C    +Y +++ A    GR  EA    +
Sbjct: 265 VSYTNLIHGL-CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M ++G   +  T T+LI   C +     + +A ++L EM  KG  P+V T+  LIDG C
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKEN---KMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G  + AF + L L+ S++  PN  TY  +I G CK+ K+++A  LL +M E+ L P+ 
Sbjct: 381 KEGMIDDAFEI-LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY SLI+G CKV + E AY L+ LM + G  P+ + Y+  ID LCK+GRV+EA  L   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + ++A+++ YT L+  + K  +   A  L  RM+     P+ + Y  LI   C++KK
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           MKE+     + +T G+ PT  TYT +I   L+DG    A+K F  M  +G  PD  TY A
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-- 605
            +     Q  L+E       M  +GI P  VT   L   Y + G +  A   L+ +    
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 606 -KLWIRTVNTLIRKLCSEKRV 625
            K  +  V+ LI+ L  E R+
Sbjct: 680 CKPSLYIVSILIKNLSHENRM 700



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 205/438 (46%), Gaps = 41/438 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++    E GR+ E   +  +MT +N  P + +    +  ++     VE A  +F+EM  +
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEK 328

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   +  +Y +++   C+  ++ EA + LS M ++G I    T   LI  +C +G    I
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM---I 385

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             AFE+L+ M      PN  T+  LI GLCKK    KA  L  K++      P++ TY +
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNS 444

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY--------------------------- 370
           +I G CK   +  A  LL  M E GL+P+  TY                           
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 371 --------TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
                   T+LI G+CKVG  + AY L++ M  + C PN Y YN +I+GLCK+ +++EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L+ K     ++   +TYTIL+ E LK      AL +F  MV  G  PD+  YT  + A+
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
             Q  ++E +    +    G+ P   TYT +I GY R G    A  + + M   GC P  
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 543 ITYGALISGLCKQSKLDE 560
                LI  L  ++++ E
Sbjct: 685 YIVSILIKNLSHENRMKE 702



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 233/527 (44%), Gaps = 45/527 (8%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           ALSFF W      F+H +  Y      LI       A ++   M+ S   I  +     +
Sbjct: 84  ALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEV 143

Query: 176 VIEMTNNGLPLITSTL---NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
             +M  +G      TL   N ++    +  L++  + V+ E+    +  +  ++  MV  
Sbjct: 144 FRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNG 203

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC++G V EA+ + S                                      ++V+ G 
Sbjct: 204 YCKIGNVVEAELYAS--------------------------------------KIVQAGL 225

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P+ +T+T LI G C+    + A+ +FL + +    +  V +YT +I G C+  ++N A 
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEV-SYTNLIHGLCEAGRINEAL 284

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L   M E    P   TYT LIY     G    A +L + M ++GC PN++ Y  +IDGL
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+ ++ EA ++L +  ++ L    +TY  L+  + K+     A  +   M      P+ 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y  LI   C+++K+ ++     + +   L P+  TY S+I G  +  ++ SA +    
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           MN+ G  PD  TY   I  LCK+ +++EA   ++S+  KG+   EV    L   YCK G 
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 593 SATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
              A  +LE +     +    T N LI  LC EK++  A+    K+L
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 217/416 (52%), Gaps = 14/416 (3%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++  L+  + ++  M  NGL     T +  +   C+ G VE A  +FD + A+GV A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            Y  ++  YC++G++  A   L  ML+   + ++ T  +LI   C +     +K+A  L+
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK---KMKEASSLV 567

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +M+  G KP V T+T+LI  + K G  + A ++F  +V S  Y+P+V TYTA +  Y  
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAYFS 626

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           +  +   + ++ +M E+G+LP+  TYT LI G+ ++G   RA+D +  M   GC P++Y 
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY--TILLSEHLKQAETKQALGLFCR 462
            + +I  L  + R++E         + E+  D ++   ++ +++  K  E + AL LF +
Sbjct: 687 VSILIKNLSHENRMKET--------RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           MV+ G   D+  Y  LIA FC+Q++++E++         G+ P+++ Y S++    + G 
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            + AV+    M + G  P   +Y  L+ GL  +   ++A   +  ++  G +  EV
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEV 854



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 33/312 (10%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++KE  S+V +M   G+     T   ++G   + G  ++A +VF+ M + G   D  +Y 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             + AY   G + E D  ++ M + G + D  T T+LI  +   G      +AF+ L+ M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT---HRAFDFLKCM 675

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG-------------------------WT----EKAFRL 318
           V  G KP++Y  ++LI  L  +                          W     E A +L
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKL 735

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F K+V       +V  Y A+I+G+C++E++  A+ L+  MKE+G+ P+ + Y SL+   C
Sbjct: 736 FEKMVEH-GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 794

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+G +  A  L+D M + G  P + +Y  ++ GL  +G  ++A  +           D++
Sbjct: 795 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEV 854

Query: 439 TYTILLSEHLKQ 450
            + +L+   LK+
Sbjct: 855 AWKVLIDGLLKR 866



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 51/128 (39%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  RL+E   +V  M   G+       N ++   C+LG+   A  + D M   G
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     SYKL+V      G   +A      +L  G   D     +LI     +       
Sbjct: 814 LLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECS 873

Query: 279 QAFELLEE 286
           +  +++EE
Sbjct: 874 ELIDIMEE 881


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/727 (26%), Positives = 327/727 (44%), Gaps = 111/727 (15%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSS--PPRLNLQIDIDSLTHEQA 100
           S + A  S+S + +  +  V+ + ++ L S+  Q  + SS  P +LN  I I S+     
Sbjct: 17  SHKAASFSSSQALTQNEDSVREITTL-LNSHNWQALMESSDIPKKLNTDI-IRSVI---- 70

Query: 101 ITVVASLANEAGS-MVALSFFYWA---IGFAKFRHFMRLYIVCATSLISNGNFERAHEVM 156
                 L N+ G     L+FFYW+   +G +  +  + +    A +L ++  +  A +++
Sbjct: 71  ------LQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLI 124

Query: 157 QCMV---------------------------------SSFAEIGRLKEGFSMVIEMTNNG 183
           +C++                                  S+ ++G L E  ++ +   N  
Sbjct: 125 KCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 184

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                 + N ++G   +   VE   +VFD MCA  V  D  +Y  M+ A+C++G V +A 
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244

Query: 244 RWL-----------------SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
           R L                  +M+D+G + D  T  +LI  FC        ++A  +L E
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC---MEKRSREAKLMLLE 301

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G KP   T+  LIDG  ++G  E+AFR+  ++V     + N+  +  +++G CK  
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GIEANLIIWNTLLNGVCKAG 360

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           KM +A  +++ M E+G+ P++ TY+ LI GHC+  N  RA++L+D M K    P +  Y+
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            II+GLC+ G +Q    +L++     L+ + + YT L++ H K+   +++  +  RM + 
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+  Y +LI  FC+ K+M+E+  +  E +   L P   TY + I GY + G +  A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 527 VKYFQRMNQIGCAP-----------------------------------DNITYGALISG 551
            +YF  M   G  P                                   D  TY  LI G
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
           L +  K+ EA   +  +  KG+ P   T  +L    CKQG+   A  +LE +  K     
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLS 667
           I T N LI  LC    +  A   F  + G+    + V+ AA+ +  C   N  A F  L 
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720

Query: 668 QRIAEGI 674
           + +  G+
Sbjct: 721 EMLLRGV 727



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 256/530 (48%), Gaps = 43/530 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F    R +E   M++EM + GL     T N ++      G +E A  + DEM A G
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SI 277
           + A+   +  ++   C+ G++ +A   +  M+++G   D+ T +LLI   C    RG ++
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC----RGQNM 397

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AFELL+EM ++   P V T++V+I+GLC+ G  +    +  ++V  +  KPN   YT 
Sbjct: 398 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM-NGLKPNAVVYTT 456

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD-LMDLMGKE 396
           +++ + KE ++  + M+LERM+EQG+LP+   Y SLI G CK    E A   LM+++ + 
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516

Query: 397 ----------------------------------GCTPNIYAYNAIIDGLCKKGRVQEAY 422
                                             G  PN+  Y A+I+G CK+G V EA+
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            + +    R +  D  TY++L+    +  +  +A G+F  + + GL P+   Y +LI+  
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q  + ++ +  +E    G+ P   TY  +I G  + G I  A   F  +   G  P+ 
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY A++ G CK      A Q  E M+ +G+ P       +    CK+     A+ + + 
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 756

Query: 603 LDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + +K +  TV  NTLI   C   ++  A     +++ K    + V+  +L
Sbjct: 757 MLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 235/464 (50%), Gaps = 13/464 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +  R++E  + ++EM    L     T    +    + G +E A+  F+EM + G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y  ++  +C+ G VTEA      +L R  + D  T ++LI      G    + 
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG---KMH 608

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTA 337
           +AF +  E+  KG  PN +T+  LI G CK+G  +KA +L  ++ ++  N  P++ TY  
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN--PDIVTYNI 666

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  ++ RA+ L + ++ +GL PN  TY +++ G+CK  N   A+ L++ M   G
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + YN I++  CK+ + ++A +L ++  ++   A  +++  L+  + K  + ++A 
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEAN 785

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M++    P+   YT+LI   C+   M E+++ + E     + PT +TYTS++ GY
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              GN+S     F+ M   G  PD +TY  +I   C++  + EAC+  + ++ KG+    
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKS 905

Query: 578 VTRVTL------AYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
             R+ L      A  +   G+   A  +L S+ K  W+    +L
Sbjct: 906 GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSL 949



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 239/578 (41%), Gaps = 87/578 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G +++ F +  EM   G+       N ++   C+ G +E A E+  EM  +G
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF----- 273
           V  D+ +Y L++  +CR   +  A   L  M  R       T +++I   C  G      
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 274 ---------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G ++++  +LE M  +G  P+V+ +  LI G 
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK    E+A R +L  +     +PN HTY A I GY K  +M  A+     M   G+LPN
Sbjct: 497 CKAKRMEEA-RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YT+LI GHCK GN   A+ +   +       ++  Y+ +I GL + G++ EA+ +  
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 615

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  ++ L  +  TY  L+S   KQ    +A  L   M   G+NPDI  Y  LI   C+  
Sbjct: 616 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD----- 541
           +++ ++  F +    GL P   TY +M+ GY +  N ++A +  + M   G  PD     
Sbjct: 676 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 735

Query: 542 -----------------------------NITYGALISGLCKQSKLDEACQFYESMIGKG 572
                                         +++  LI G CK  KL EA    E MI K 
Sbjct: 736 VILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-----------RTVNTLIRKLCS 621
             P  VT  +L    CK G    A        K+LW+           +T  +L+    +
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEA--------KRLWLEMQERNVMPTAKTYTSLLHGYHN 847

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
              +   +  F +++ K    D+++   + +A C E N
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 885



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 142/342 (41%), Gaps = 75/342 (21%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G + +   ++ EM   G+     T N ++   C+ G +E A+ +FD++  RG
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
           +  +  +Y  MV  YC+    T A + L  ML RG   D A +  +I  FC         
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD-AFIYNVILNFCCKEEKFEKA 750

Query: 270 --------DKGF---------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                   +KGF                G +++A  LLEEM+ K + PN  T+T LID  
Sbjct: 751 LDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 810

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G   +A RL+L++ +  N  P   TYT+++ GY     M+    L E M  +G+ P+
Sbjct: 811 CKAGMMGEAKRLWLEM-QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPD 869

Query: 367 TNTYTSLIYGHCK-----------------------------------------VGNFER 385
             TY  +I  +C+                                          GN + 
Sbjct: 870 KMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDE 929

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           A +++  M K G   N  +   ++DG       +++  LLK+
Sbjct: 930 AAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQ 971



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++    + G + E   + +EM    +     T   ++     +G +     +F+
Sbjct: 800 HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 859

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDK 271
           EM A+G+  D  +Y +M+ AYCR G V EA +    +L +G  + +   L L   +   +
Sbjct: 860 EMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIAR 919

Query: 272 GFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           GF+  G++ +A E+L  MV+ GW  N  +   L+DG
Sbjct: 920 GFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/441 (33%), Positives = 221/441 (50%), Gaps = 7/441 (1%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R +  +   +S F  I  +K   ++ +E+ NN +     T N +V   C++G V  AE  
Sbjct: 160 RCYNTILMSLSKFLLIDEMK---TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
             ++   G+  D  +Y  +++ +CR   V  A      M  +G   +  + T LI   C+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G    I +A +L  +M      P V T+TVLI  L   G   +A  LF ++ +    +P
Sbjct: 277 AG---RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM-KEKGCEP 332

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NVHTYT +I G CKE KM+ A  +L  M E+GL+P+  TY +LI G+CK G  + A++++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           DLM    C PN   YN +I GLCKK +V +A  LL K  +R+L    ITY  L+    K 
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            + + A  L   M + GL PD   Y+  I   C++ +++E+   F      G+   +  Y
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T++I GY + G I  A    +RM    C P++ TY  LI GLCK+ K+ EA      M+ 
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572

Query: 571 KGISPCEVTRVTLAYEYCKQG 591
            G+ P  VT   L  E  K G
Sbjct: 573 MGVKPTVVTYTILIGEMLKDG 593



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 228/441 (51%), Gaps = 8/441 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            S  N + G+ CE G +  A ++F +M     C    +Y +++ A    GR  EA    +
Sbjct: 265 VSYTNLIHGL-CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M ++G   +  T T+LI   C +     + +A ++L EM  KG  P+V T+  LIDG C
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKEN---KMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G  + AF + L L+ S++  PN  TY  +I G CK+ K+++A  LL +M E+ L P+ 
Sbjct: 381 KEGMIDDAFEI-LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY SLI+G CKV + E AY L+ LM + G  P+ + Y+  ID LCK+GRV+EA  L   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + ++A+++ YT L+  + K  +   A  L  RM+     P+ + Y  LI   C++KK
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           MKE+     + +T G+ PT  TYT +I   L+DG    A+K F  M  +G  PD  TY A
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-- 605
            +     Q  L+E       M  +GI P  VT   L   Y + G +  A   L+ +    
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 606 -KLWIRTVNTLIRKLCSEKRV 625
            K  +  V+ LI+ L  E R+
Sbjct: 680 CKPSLYIVSILIKNLSHENRM 700



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 256/584 (43%), Gaps = 97/584 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++    E GR+ E   +  +MT +N  P + +    +  ++     VE A  +F+EM  +
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEK 328

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   +  +Y +++   C+  ++ EA + LS M ++G I    T   LI  +C +G    I
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM---I 385

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             AFE+L+ M      PN  T+  LI GLCKK    KA  L  K++      P++ TY +
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITYNS 444

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY--------------------------- 370
           +I G CK   +  A  LL  M E GL+P+  TY                           
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 371 --------TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
                   T+LI G+CKVG  + AY L++ M  + C PN Y YN +I+GLCK+ +++EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L+ K     ++   +TYTIL+ E LK      AL +F  MV  G  PD+  YT  + A+
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG--------------------- 521
             Q  ++E +    +    G+ P   TYT +I GY R G                     
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 522 --------NISS------------------------AVKYFQRMNQIGCAPDNITYGALI 549
                   N+S                         A+K F++M + GC  D   YGALI
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALI 744

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
           +G C+Q +L+EA      M  +G+SP E    +L    CK G  A A+ +++++ +    
Sbjct: 745 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 804

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             + +   L+  L  E     A   FH LL    N D V+   L
Sbjct: 805 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 848



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 233/527 (44%), Gaps = 45/527 (8%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           ALSFF W      F+H +  Y      LI       A ++   M+ S   I  +     +
Sbjct: 84  ALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEV 143

Query: 176 VIEMTNNGLPLITSTL---NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
             +M  +G      TL   N ++    +  L++  + V+ E+    +  +  ++  MV  
Sbjct: 144 FRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNG 203

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC++G V EA+ + S                                      ++V+ G 
Sbjct: 204 YCKIGNVVEAELYAS--------------------------------------KIVQAGL 225

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P+ +T+T LI G C+    + A+ +FL + +    +  V +YT +I G C+  ++N A 
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEV-SYTNLIHGLCEAGRINEAL 284

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L   M E    P   TYT LIY     G    A +L + M ++GC PN++ Y  +IDGL
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+ ++ EA ++L +  ++ L    +TY  L+  + K+     A  +   M      P+ 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y  LI   C+++K+ ++     + +   L P+  TY S+I G  +  ++ SA +    
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           MN+ G  PD  TY   I  LCK+ +++EA   ++S+  KG+   EV    L   YCK G 
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 593 SATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
              A  +LE +     +    T N LI  LC EK++  A+    K+L
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 214/433 (49%), Gaps = 22/433 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++  L+  + ++  M  NGL     T +  +   C+ G VE A  +FD + A+GV A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            Y  ++  YC++G++  A   L  ML+   + ++ T  +LI   C +     +K+A  L+
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK---KMKEASSLV 567

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +M+  G KP V T+T+LI  + K G  + A ++F  +V S  Y+P+V TYTA +  Y  
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAYFS 626

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           +  +   + ++ +M E+G+LP+  TYT LI G+ ++G   RA+D +  M   GC P++Y 
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 405 YNAIIDGLCKKGRVQEA--------------YELLKKAFQRELQ----ADKITYTILLSE 446
            + +I  L  + R++E               YE+  K F++ ++     D   Y  L++ 
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 746

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +Q   ++A GL   M + G++P    Y +L+   C+     E+ +     +  GL P 
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
            E+Y  ++CG   +G+   A   F  +   G   D + +  LI GL K+  +DE  +  +
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866

Query: 567 SMIGKGISPCEVT 579
            M  KG  P  +T
Sbjct: 867 IMEEKGCQPNPLT 879



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 215/486 (44%), Gaps = 33/486 (6%)

Query: 26  VIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSM-VLESYYQQFHLRSS-- 82
           +I  LC +   H  +A   +      S S     SL+   C +  LES Y+   L +   
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469

Query: 83  --PPRLNLQIDIDSLTHEQAITVVASLAN--EAGSMVALSFFYWAI--GFAKFRHFMRLY 136
             P +    + ID+L  E  +    +L +  +A  + A    Y A+  G+ K       Y
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 137 IVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
            +    ++++     ++     ++    +  ++KE  S+V +M   G+     T   ++G
Sbjct: 530 SL-LERMLNDACLPNSY-TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
              + G  ++A +VF+ M + G   D  +Y   + AY   G + E D  ++ M + G + 
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT---- 312
           D  T T+LI  +   G      +AF+ L+ MV  G KP++Y  ++LI  L  +       
Sbjct: 648 DLVTYTVLIDGYARLGLT---HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704

Query: 313 --------------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
                         E A +LF K+V       +V  Y A+I+G+C++E++  A+ L+  M
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEH-GCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           KE+G+ P+ + Y SL+   CK+G +  A  L+D M + G  P + +Y  ++ GL  +G  
Sbjct: 764 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 823

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  +           D++ + +L+   LK+    +   L   M + G  P+   Y+ L
Sbjct: 824 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLL 883

Query: 479 IAAFCR 484
           I    R
Sbjct: 884 IEGLER 889


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 293/632 (46%), Gaps = 58/632 (9%)

Query: 39  FLANSKQPAFSSTSSSPS---PPQSLVKTVCSMVLESYYQ-QFHLRSSPPRLNLQIDIDS 94
           FL  S +P  SS  + P+   P Q++V  VC+++    ++    L+   P+L        
Sbjct: 22  FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLK------- 74

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE 154
             H  A  V      E+     + FFYW      ++H M  +I     L+ +  F  A  
Sbjct: 75  -AHHVAEIVAVHKDTES----VIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADH 129

Query: 155 VMQCMVSS-------------FAEIGRLKEGFSMVI----------------------EM 179
           +   M+ +               EI  +  GFS+                        +M
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            N+G+     T N ++ I  + G V  AE +  ++    +  D  +Y  +++ +CR   +
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             A      M+  G   ++ T + LI   C++G    + +A ++LEEM+ KG +P VYT+
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKGIEPTVYTY 306

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T+ I  LC     E+A  L  ++ +    +PNV TYTA+ISG  +  K+  A  L  +M 
Sbjct: 307 TLPITALCAIEHEEEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           ++GL+PNT TY +LI   C  G F  A  +   M   G   N   YN II GLC  G ++
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  L +K  +       +TY  L++ +L +     A  L   M + G  PD   Y  L+
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +  K++ +  +FQE +  GL P   +YT++I G+ +DG +  A+   +RM ++GC 
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  +Y A+I+GL K+++  EA +  + M+ +G+ P  +T  TL    C+ G +  A  I
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMA 628
              ++K+  +    T ++LI  LC E +   A
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 222/458 (48%), Gaps = 8/458 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  + +G+L+    +  +M   GL   T T N ++   C  G    A ++F  M   G
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++   C  G + +A      ML  G +    T   LI  +  KG   ++ 
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG---NVN 460

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+ M   G +P+ +T+  L+ G  K G  E A   F ++V      PN  +YTA+
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC-GLNPNPVSYTAL 519

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K+ K++ A  LL+RM+E G  PN  +Y ++I G  K   F  A  + D M ++G 
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y  +IDGLC+ GR Q A+++     +R+   +  TY+ L+    ++ +  +A  
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE- 638

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              RM + G  P +  Y+TL++  CR+ +  E+E+  ++    G  P +E Y S++  + 
Sbjct: 639 ---RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 695

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++  +  A+K F  +   G       Y ALI  LCK  +++EA   +++M+ K  +  E+
Sbjct: 696 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 755

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
               L     K+G+    M +L  ++ K +   + T +
Sbjct: 756 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 793



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 198/427 (46%), Gaps = 8/427 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR      +   M  +G    T T N ++   C  G +E A  +F++M   G      +Y
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  Y   G V  A R L  M + G   D  T   L++ F      G ++ A    +E
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK---WGKLESASFYFQE 503

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G  PN  ++T LIDG  K G  + A  L LK +      PNV +Y A+I+G  KE 
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSL-LKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           + + AE + ++M EQGLLPN  TYT+LI G C+ G  + A+ +   M K  C PN+Y Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I GLC++G+  EA  + +   +  L     TY+ L+S   ++    +A  L   M + 
Sbjct: 623 SLIYGLCQEGKADEAERMSEIGCEPTLD----TYSTLVSGLCRKGRFYEAEQLVKDMKER 678

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  PD   Y +L+ A C+  ++  + K F      G       Y ++IC   + G +  A
Sbjct: 679 GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 738

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  M +     D I +  L+ GL K+ +LD   +    M  K  +P   T V L  E
Sbjct: 739 QALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRE 798

Query: 587 YCKQGDS 593
             + G S
Sbjct: 799 LSRIGKS 805



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 8/334 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +VS F++ G+L+       EM   GL     +   ++    + G V+ A  +   M   G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY  ++    +  R +EA++    M+++G + +  T T LI   C  G     +
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG---RTQ 600

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF++  +M ++   PN+YT++ LI GLC++G  ++A R+          +P + TY+ +
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM-----SEIGCEPTLDTYSTL 655

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG C++ +   AE L++ MKE+G  P+   Y SL+  HCK    + A  +   +  +G 
Sbjct: 656 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 715

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  Y A+I  LCK G+V+EA  L     ++E  AD+I +T+L+   LK+ E    + 
Sbjct: 716 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 775

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L   M      P+I  Y  L     R  K  ESE
Sbjct: 776 LLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 809



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 4/181 (2%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M+  G      T + +V   C  G    AE++  +M  RG C D   Y  +++A+C+   
Sbjct: 640 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 699

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V  A +   ++  +G  L  +    LI A C  G    +++A  L + M+ K W  +   
Sbjct: 700 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAG---QVEEAQALFDNMLEKEWNADEIV 756

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            TVL+DGL K+G  +   +L L ++ S N+ PN+ TY  +     +  K   +E L +++
Sbjct: 757 WTVLVDGLLKEGELDLCMKL-LHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815

Query: 359 K 359
           K
Sbjct: 816 K 816


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 226/447 (50%), Gaps = 4/447 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    ++   + +  +M  NG      T N ++   C  GL++ A E+ DEM  RG
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++   C+ G++  A +      +     D    + LI   C  G    + 
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG---RLD 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L E+M     +P+V T T L+DGLCK    ++A ++ L+ +   N  PNV TY+++
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV-LETMEDRNCTPNVITYSSL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A+ + +RM  +G+ PN  TY SLI+G C     + A  LM+ M   GC
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDGLCK GR  EA  L      +    D ITY+ L+    K      A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+K  + PD+  ++TL+  +C    + ++E+  +E + +   P   TYTS++ G+ 
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A +  +RM + GC P+ +TY ALI   C+  K   A +  E M+G G+ P  +
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK 605
           T  +L   +C  GD   A  ILE L++
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERLER 644



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 223/436 (51%), Gaps = 10/436 (2%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +Y +++   C+ G + +A   L  M + G + D A    +I A C        
Sbjct: 54  GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
              F  +E       + NV T T++IDGLCK     +A   F K+ +     PN  TY  
Sbjct: 114 LDYFRSME------CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNV 166

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CK  K++RA +LL+ MKE GL PN  TY+++I+G C+    + AY L   M + G
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  YN ++ GLC+ G + EAYELL +  +R LQ DK +Y  L++   K  +   AL
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F         PD+ AY+TLIA  C+  ++ E+ K F++       P   T+T+++ G 
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +  A +  + M    C P+ ITY +LI GLCK  ++ +A + ++ MI +GI P  
Sbjct: 347 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 406

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT  +L + +C      +A++++E +        I T NTLI  LC   R   A   F  
Sbjct: 407 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 466

Query: 635 LLGKDQNVDRVSLAAL 650
           +  K  N D ++ + L
Sbjct: 467 MKAKFCNPDVITYSCL 482



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 264/574 (45%), Gaps = 67/574 (11%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ-CMVSSFAEIGRLKEGFS 174
           AL FF+WA     F H +  Y     +L+      RA  + + C +        LK G+ 
Sbjct: 7   ALRFFHWASKQQGFDHNVYTYNRLFEALL------RARRIDETCHI--------LKNGWP 52

Query: 175 MVIEMTNNGLPLITS---TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK---- 227
                     P IT    T   V+   C+ G ++ A E+ +EM   G   DA+ Y     
Sbjct: 53  ----------PGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIH 102

Query: 228 ----------------------------LMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                                       +M+   C+  R+ EA  + + M  +G + +  
Sbjct: 103 ALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEW 162

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +LI  FC       + +A+ LL+EM   G  PNV T++ +I G C++   + A++LF
Sbjct: 163 TYNVLINGFCKV---HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++V  +   PN+ TY  ++SG C+   M+ A  LL+ M+E+GL P+  +Y +L+ G CK
Sbjct: 220 RQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  + A  + +      C P++ AY+ +I GLCK GR+ EA +L +K  +   + D +T
Sbjct: 279 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +T L+    K    ++A  +   M      P++  Y++LI   C+  +++++++ F+  I
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+ P   TY S+I G+     + SA+   + M   GC PD ITY  LI GLCK  +  
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLI 616
           EA + +  M  K  +P  +T   L   +CK      A  + + + K+     + T +TL+
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              C+   V  A     +++  D + D  +  +L
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 230/482 (47%), Gaps = 7/482 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +  RL E  +   +M   G      T N ++   C++  V  A  +  EM   G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  +CR  +V  A +    M++ G + +  T   L++  C  G    + 
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL---MD 248

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+ELL+EM  +G +P+ +++  L+ GLCK G  + A ++F      D   P+V  Y+ +
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD-CPPDVVAYSTL 307

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  +++ A  L E+M+E    P+  T+T+L+ G CK    + A  +++ M    C
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  Y+++IDGLCK G+V++A E+ K+   R ++ + +TY  L+           AL 
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G  PDI  Y TLI   C+  +  E+ + F +       P   TY+ +I G+ 
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 487

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   I  A   F  M +    PD +T+  L+ G C    +D+A +  E M+    SP   
Sbjct: 488 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 547

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  +L   +CK G    A  +L+ + K+     + T   LI   C   +  +A     ++
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607

Query: 636 LG 637
           +G
Sbjct: 608 VG 609



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 13/429 (3%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           SNG+          +++   + GRL E   +  +M  N       T   ++   C+   +
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A++V + M  R    +  +Y  ++   C+ G+V +A      M+ RG   +  T   L
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I  FC       +  A  L+EEM   G  P++ T+  LIDGLCK G   +A RLF  + +
Sbjct: 413 IHGFC---MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-K 468

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           +    P+V TY+ +I G+CK E+++ A  L + M +Q +LP+  T+++L+ G+C  G  +
Sbjct: 469 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A  L++ M    C+P++Y Y +++DG CK GR+ EA  +LK+  +R  Q + +TYT L+
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ-----EAI 499
               +  +   A  L   MV  G+ P++  Y +LI  FC    ++E+ K  +     E  
Sbjct: 589 DAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC 648

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            A +F     Y  M+ G  R G +S+A++  + + Q G  P +  Y ALI GLC+  +L 
Sbjct: 649 KADMF----AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 704

Query: 560 EACQFYESM 568
           +A +  E M
Sbjct: 705 KAMEVLEEM 713



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A R F    +   +  NV+TY  +     +  +++    +L+     G+ PN  TY  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G CK G+ ++A +L++ M + G  P+   YN +I  LCK     +A +  +     E
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---E 121

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + IT+TI++    K     +A   F +M K G  P+   Y  LI  FC+  K+  + 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              +E   +GL P   TY+++I G+ R   + +A K F++M + GC P+ +TY  L+SGL
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWI 609
           C+   +DEA +  + M  +G+ P + +  TL    CK G    A+ + E   + D    +
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              +TLI  LC   R+  A   F K+       D V+  AL + 
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG 345



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 139/268 (51%), Gaps = 4/268 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  F ++ R+    ++  +M    +     T + +V   C  GLV+ AE + +EM A 
Sbjct: 481 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 540

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               D  +Y  +V  +C++GR+ EA R L  M  RG   +  T T LI AFC  G     
Sbjct: 541 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG---KP 597

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A+ LLEEMV  G +PNV T+  LI G C  G  E+A ++  +L R +N K ++  Y  
Sbjct: 598 TVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRV 657

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG-KE 396
           M+ G C+  +M+ A  LLE +K+ G  P  + Y +LI G C+     +A ++++ M    
Sbjct: 658 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
              PN  AY A+I  L ++GR +EA  L
Sbjct: 718 KSRPNAEAYEAVIQELAREGRHEEANAL 745



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 4/201 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F ++GR+ E   ++  M   G      T   ++   C  G    A  + +EM   G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCDKGFRGSI 277
           V  +  +Y+ ++  +C  G + EA + L  +  D     D     +++   C  G    +
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG---RM 668

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A ELLE + + G  P    +  LI GLC+     KA  +  ++  S   +PN   Y A
Sbjct: 669 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 728

Query: 338 MISGYCKEEKMNRAEMLLERM 358
           +I    +E +   A  L + +
Sbjct: 729 VIQELAREGRHEEANALADEL 749


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 269/603 (44%), Gaps = 56/603 (9%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ---------------CMV 160
           AL FF WA     ++H +         L+    + +AH++ +                ++
Sbjct: 109 ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLI 168

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGL----------------------------------PL 186
           S F   G++   + +  EM   GL                                  P 
Sbjct: 169 SGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPP 228

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
            + T N ++    +   ++ A  + +EM   G   +  SY  ++  +C+  RV  A   L
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 288

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M+ RG   D  + T +I   C       + +A  ++++M+++G +PNV T+  L+DG 
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCK---LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C+ G  + A  L  K+     Y+PN  TY  ++  +C+   M RA  +L+ M + G  P+
Sbjct: 346 CRVGDLDGAVELVRKMTER-GYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y+++I G CK G    A+DL++ M + GC P++   + +ID LCK   +  A ELL+
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
            +   +   D + Y+IL+    K     +A      MVK    PD+  Y +++   C+ +
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ ++   F     AG+ P   TY+ +I  + +D N+ SA K  +RM +  C PD +TY 
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYS 584

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ALI+GLCK   +D+A   ++ M+G G +P  VT  TL    CK      A  +LE + K+
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644

Query: 607 LWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALF 663
                  T   LI  LC+  R+  A     ++  K    DR++   L  A  ++N   L 
Sbjct: 645 SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704

Query: 664 SDL 666
             L
Sbjct: 705 EQL 707



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 241/509 (47%), Gaps = 25/509 (4%)

Query: 116  ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQC----------------M 159
            AL FF WA     + H       C   L +    +R  + +Q                 +
Sbjct: 827  ALGFFDWATSQEGYNHDT---YTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTIL 883

Query: 160  VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
            +      G +   + ++ EM  +G+P      N V+   C    ++ A E+F EM   G 
Sbjct: 884  IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943

Query: 220  C-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            C  D  +Y  +V +  + G+V +A R +  M+ +G   +  T + L+   C     G + 
Sbjct: 944  CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA---GKLD 1000

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +A  LL+ M R G  PN+ T+  +IDG CK G  ++A+ L  ++V     +PNV TYT +
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG-GCQPNVVTYTVL 1059

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            +  +CK  K   A  L+E M E+G +PN  TY SL+   CK    ERA  L+  M ++GC
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             PN+ +YN +I GLCK  +V E   LL++        D +T+  ++    K      A  
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 1179

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGY 517
            LF  + ++G  P++  Y +L+   C+ ++  ++E   +E     G  P   TY ++I G 
Sbjct: 1180 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 1239

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             +   +  A K F +M   G APD++TY  +IS LCK   +DEA    E M+  G  P  
Sbjct: 1240 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 1299

Query: 578  VTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +T  TL   +CK G+   A+ IL+ L  K
Sbjct: 1300 ITYGTLIDGFCKTGNLDKALEILQLLLSK 1328



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 234/446 (52%), Gaps = 5/446 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +V S  + G++ +   +V +M + G      T + ++   C+ G ++ A  +   M   G
Sbjct: 954  IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               +  +Y  ++  +C++GR+ EA   L  M+D G   +  T T+L+ AFC  G     +
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG---KAE 1070

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             A  L+E MV KG+ PN++T+  L+D  CKK   E+A +L   +++     PNV +Y  +
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTV 1129

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I+G CK  K++   +LLE+M     +P+  T+ ++I   CK    + AY+L +L+ + GC
Sbjct: 1130 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 1189

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQAL 457
            TPN+  YN+++ GLCK  R  +A  LL++  +++    D ITY  ++    K     +A 
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249

Query: 458  GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             LF +M+  GL PD   Y+ +I++ C+ + M E+    +  +  G  P   TY ++I G+
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 1309

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             + GN+  A++  Q +   G  PD +T+   I  L K+ +L +A +  E+M+  G+ P  
Sbjct: 1310 CKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 1369

Query: 578  VTRVTLAYEYCKQGDSATAMIILESL 603
            VT  TL   +C    +  A+ + E +
Sbjct: 1370 VTYNTLLKGFCDASLTEDAVDLFEVM 1395



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 201/391 (51%), Gaps = 7/391 (1%)

Query: 260  TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
            T T+LI   C  G    I  A+ELL+EM R G   NV  H V+I GLC     + A  LF
Sbjct: 879  TFTILIHGLCRAG---DIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             ++  S +  P+V TY+ ++    K  K++ A  L+E M  +G  PN  TY+SL++G CK
Sbjct: 936  KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             G  + A  L+  M + GC+PNI  YN IIDG CK GR+ EAY LL++      Q + +T
Sbjct: 996  AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
            YT+LL    K  + + A+GL   MV+ G  P++  Y +L+  FC++ +++ + +     I
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115

Query: 500  TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
              G  P   +Y ++I G  +   +   V   ++M    C PD +T+  +I  +CK  ++D
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 560  EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW----IRTVNTL 615
             A + +  +   G +P  VT  +L +  CK      A  +L  + +K      I T NT+
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 616  IRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            I  LC  KRV  A   F ++L      D V+
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 1266



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 233/464 (50%), Gaps = 20/464 (4%)

Query: 136  YIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMT 180
            Y     SL+ +G  + A  +++ MVS                  + G+L E  +++  MT
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010

Query: 181  NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             +G      T N ++   C+LG ++ A  + +EM   G   +  +Y +++ A+C+ G+  
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 241  EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            +A   +  M+++G + +  T   L+  FC K     +++A +LL  M++KG  PNV ++ 
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD---EVERACQLLSSMIQKGCVPNVVSYN 1127

Query: 301  VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
             +I GLCK     +   L L+ + S+N  P++ T+  +I   CK  +++ A  L   ++E
Sbjct: 1128 TVIAGLCKATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186

Query: 361  QGLLPNTNTYTSLIYGHCKVGNFERA-YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  PN  TY SL++G CK   F++A Y L ++  K+GC+P+I  YN +IDGLCK  RV 
Sbjct: 1187 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 1246

Query: 420  EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
             AY+L  +     L  D +TY+I++S   K     +A  +   M+K G +P    Y TLI
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306

Query: 480  AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              FC+   + ++ +  Q  ++ G +P   T++  I    + G +  A +  + M + G  
Sbjct: 1307 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366

Query: 540  PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            PD +TY  L+ G C  S  ++A   +E M   G  P   T  TL
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 10/421 (2%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T + LI+ F   G    I  A+EL +EM RKG K +   H  ++ GLC  G    A 
Sbjct: 160 DTVTYSTLISGFIRAG---KILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAV 216

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             F ++  S    P+  TY  MI+G  K ++++ A  LLE M + G  PN  +Y ++++G
Sbjct: 217 LHFREM--SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG 274

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK    E A  L++ M   GC P++ +Y  +I+GLCK  +V EA  ++ K  QR  Q +
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            ITY  L+    +  +   A+ L  +M + G  P+   Y  ++  FCR+  M+ + +  Q
Sbjct: 335 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             I  G  P    Y+++I G+ + G +  A    ++M + GC PD      LI  LCK +
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
            +D A +     IG   +P  V    L +  CK      A   L+ + K      + T N
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA-ALKNACYESNKYALFSDLSQRIAE 672
           +++  LC  +R+  A L F ++       D V+ +  + + C ++N  + F  L +R+ E
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML-ERMKE 573

Query: 673 G 673
            
Sbjct: 574 A 574



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 4/410 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   ++ ++ E   ++ +M   G      T   +V   C +G ++ A E+  +M  RG
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +Y  ++  +CR   +  A + L  M+  G   D    + +I+ FC  G    ++
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG---KLR 422

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LLE+M+R+G +P+V   + LID LCK    + A  L L++    +  P+V  Y+ +
Sbjct: 423 EAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL-LRMSIGMDCAPDVVAYSIL 481

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK +++  AE  L+ M +    P+  TY S++ G CK      A+ L D M   G 
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y+ +I   CK   +  A+++L++  + +   D +TY+ L++   K     +A  
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G  P++  Y TLI   C+  K++++ +  +        P   TYT +I G  
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               +  A +  + M   GC PD +TYG L+  L K + L+   Q  + M
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 4/362 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++ +F + G+ ++   +V  M   G      T N ++ + C+   VE A ++   M  +G
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               +  SY  ++   C+  +V E    L  ML    + D  T   +I A C K +R  I 
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC-KTYRVDI- 1176

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             A+EL   +   G  PN+ T+  L+ GLCK    ++A  L  ++ R     P++ TY  +
Sbjct: 1177 -AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G CK ++++RA  L  +M   GL P+  TY+ +I   CK    + A ++++LM K G 
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             P    Y  +IDG CK G + +A E+L+    +    D +T++I +    K+   +QA  
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            L   M++AGL PD   Y TL+  FC     +++   F+     G  P   TYT+++ G+L
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV-GHL 1414

Query: 519  RD 520
             D
Sbjct: 1415 VD 1416



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 170/350 (48%), Gaps = 9/350 (2%)

Query: 289  RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL-KLVRSDNYKPNVHTYTAMISGYCKEEK 347
            ++G+  + YT   L+  L +    + A +++  KL  S    PN+ T+T +I G C+   
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS----PNMFTFTILIHGLCRAGD 892

Query: 348  MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIYAYN 406
            +  A  LL+ M   G+  N   +  +I G C     + A +L   M + G C P+++ Y+
Sbjct: 893  IGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYS 952

Query: 407  AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
             I+D L K G+V +A  L++    +    + +TY+ LL    K  +  +A  L  RM ++
Sbjct: 953  TIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012

Query: 467  GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            G +P+I  Y T+I   C+  ++ E+    +E +  G  P   TYT ++  + + G    A
Sbjct: 1013 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072

Query: 527  VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            +   + M + G  P+  TY +L+   CK+ +++ ACQ   SMI KG  P  V+  T+   
Sbjct: 1073 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 1132

Query: 587  YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
             CK       +++LE +        I T NT+I  +C   RV +A   F+
Sbjct: 1133 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 4/312 (1%)

Query: 365  PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            PN  T+T LI+G C+ G+   AY+L+  M + G   N+  +N +I GLC   ++  A EL
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 425  LKKAFQR-ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
             K+  +      D  TY+ ++   +K  +   A  L   MV  G +P++  Y++L+   C
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 484  RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
            +  K+ E+    Q    +G  P   TY ++I G+ + G I  A    + M   GC P+ +
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 544  TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            TY  L+   CK  K ++A    E M+ KG  P   T  +L   +CK+ +   A  +L S+
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 604  DKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
             +K  +  V   NT+I  LC   +V    L   ++L  +   D V+   + +A  ++ + 
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 661  ALFSDLSQRIAE 672
             +  +L   I E
Sbjct: 1175 DIAYELFNLIQE 1186



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 128/245 (52%), Gaps = 4/245 (1%)

Query: 398  CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            C+PN++ +  +I GLC+ G +  AYELLK+  +  +  + I + +++       +   AL
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932

Query: 458  GLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  M ++G   PD+  Y+T++ +  +  K+ ++ +  ++ ++ G  P   TY+S++ G
Sbjct: 933  ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992

Query: 517  YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
              + G +  A    QRM + GC+P+ +TY  +I G CK  ++DEA    E M+  G  P 
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 577  EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFH 633
             VT   L   +CK G +  A+ ++E + +K ++    T N+L+   C +  V  A     
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 634  KLLGK 638
             ++ K
Sbjct: 1113 SMIQK 1117



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/313 (20%), Positives = 118/313 (37%), Gaps = 77/313 (24%)

Query: 147  GNFERAHEVMQCMVS--SFAEI-------------GRLKEGFSMVIEMTNNGLPLITSTL 191
            GN ++A E++Q ++S  S+ ++             GRL++   ++  M   GL   T T 
Sbjct: 1313 GNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTY 1372

Query: 192  NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM---------------------- 229
            N ++   C+  L E A ++F+ M   G   D ++Y  +                      
Sbjct: 1373 NTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMV 1432

Query: 230  ------------------------------VVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                                          V  + + G   +A +    M  R  +L +A
Sbjct: 1433 DTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSA 1492

Query: 260  TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
             L + +       F    +QAF L   M  +G +P+  T   L+   C  G  + A   F
Sbjct: 1493 MLGVYV-------FHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            + + R    +P V  ++ +I    +   +N AE L+  M  +   P+  T+  L+  +  
Sbjct: 1546 VSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKI 1602

Query: 380  VGNFERAYDLMDL 392
             G+FERA  + +L
Sbjct: 1603 CGDFERALRVAEL 1615


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 272/544 (50%), Gaps = 40/544 (7%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           GN    + V   ++ ++ +  +L+EG      + + G  +  +  N ++G   ++  VE 
Sbjct: 42  GNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A EV  E+   G+  +  +  +MV A C+ G+  +   +LS M   G   D  T   LI 
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG 161

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--- 323
           A+C +G    +++AFE++  M  KG KP+++T+  +I+GLCKKG   +A  + ++++   
Sbjct: 162 AYCREGL---LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218

Query: 324 ----------------RSDNYK---------------PNVHTYTAMISGYCKEEKMNRAE 352
                           R DN+                P++ +++++I+ + +   +++A 
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           +    MK+ GL+P+   YT L++G+C+ GN   A  + D M ++GC  ++ AYN I++GL
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+  + +A +L  +  +R    D  T+T L+  H +     +AL LF  M +  + PDI
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            AY TLI  FC+  +M+++ + +   I+  +FP   TY  +I  Y   G++S A + +  
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M + G  P  +T   +I G C+     +A +F   MI KG++P  ++  TL   + ++ +
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518

Query: 593 SATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A + +  ++K+     I T N ++   C + R+  A L   K++ K  N DR +  A
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578

Query: 650 LKNA 653
           L N 
Sbjct: 579 LING 582



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 221/447 (49%), Gaps = 19/447 (4%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G  E A E+M  M               ++   + GR      ++IEM N GL   T+T 
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++  +C       A+E+F EM  +GV  D  S+  ++  + R   + +A  +   M  
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G + DN   T+L+  +C  G   ++ +A ++ +EM+ +G   +V  +  +++GLCK+  
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNG---NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A +LF ++V      P+ +T+T +I G+C++  M +A  L   M ++ + P+   Y 
Sbjct: 344 LTDADKLFDEMVERGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G CKVG  E+A +L D M      PN   Y  +I+  C  G V EA+ L     ++
Sbjct: 403 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 462

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++   +T   ++  + +  ++ +A     RM+  G+ PD  +Y TLI  F R+  M ++
Sbjct: 463 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA 522

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             +  +    GL P   TY  ++ G+ R G +  A    ++M + G  PD  TY ALI+G
Sbjct: 523 FLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEV 578
              Q  L+EA +F++ M+ +G +P +V
Sbjct: 583 HVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 23/445 (5%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL---- 284
           MV  + R  R+++A   +  M+ R  +     +  L+++ C  G  G+    F+LL    
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMC--GNCGTNNLVFDLLIRTY 58

Query: 285 ---------EEMVR----KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                     E  R    KG+  ++     L+ GL K  W E A+ +  ++VRS   + N
Sbjct: 59  VQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRS-GIELN 117

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V+T   M++  CK+ K +  +  L  M+  G+  +  TY +LI  +C+ G  E A+++M+
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  P+++ YNAII+GLCKKGR   A  +L +     L  D  TY  LL E  ++ 
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  +F  M++ G+ PD+ ++++LIA F R + + ++  +F++    GL P    YT
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT 297

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++ GY R+GN+  A+K    M + GC  D I Y  +++GLCK+  L +A + ++ M+ +
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
           G  P   T  TL + +C+ G+   A+ +  ++ +   K  I   NTLI   C    +  A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNA 653
           +  +  ++ +    + ++   L NA
Sbjct: 418 SELWDGMISRKIFPNHITYGILINA 442


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 263/557 (47%), Gaps = 49/557 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +   L  G  +  E+   G      T N ++   C+ G +E A  +  +M +R 
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA-ILDN-ATLTLLITAFCDKGFRGS 276
              +  +Y +++   C++GR+ EA   +  M  +   +L N  T    +   C +     
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA- 340

Query: 277 IKQAFELLEEMVRKG---WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             +A EL+  + R G     P+  T + LIDGLCK G  ++A  +F  ++ +  Y PNV 
Sbjct: 341 --EACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI-AGGYVPNVI 396

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY A+++G CK +KM RA  ++E M ++G+ P+  TY+ L+   CK    + A +L+  M
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-AFQRELQADKITYTILL-------- 444
              GCTPN+  +N+IIDGLCK  R  EA+++    A +  L  DKITY  L+        
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516

Query: 445 ---SEHL--------------------KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
              +E L                    K  +  +AL ++ RM++  L PD   +  LIA 
Sbjct: 517 AGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+    +++   F+E +   L P   T+ ++I G  + G + +A      M  +G  P+
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY AL+ GLCK  +++EACQF E M+  G  P  +T  +L Y  C+   +  A+ ++ 
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696

Query: 602 SLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            L    W     T N L+  L    +   A     +++GK  + D V+   L ++  ++ 
Sbjct: 697 ELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAG 756

Query: 659 KYA----LFSDLSQRIA 671
                  L  D+S R++
Sbjct: 757 DLEEARRLHGDMSSRVS 773



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 257/522 (49%), Gaps = 24/522 (4%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++   + G  ++  ++  EM    L     T   ++   C+ G VE A ++ D M   G
Sbjct: 573  LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-I 277
            V  +  +Y  +V   C+ GR+ EA ++L  M+  G + D+ T   L+ A C    R S  
Sbjct: 633  VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC----RASRT 688

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
              A +L+ E+   GW P+  T+ +L+DGL K G TE+A  +  ++V    + P+V TY  
Sbjct: 689  DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV-GKGHHPDVVTYNT 747

Query: 338  MISGYCKEEKMNRAEMLLERMKEQ---GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
            +I   CK   +  A  L   M  +     +PN  TY+ LI G CKVG  + A +L+  M 
Sbjct: 748  LIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM 807

Query: 395  KEGCT--PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA--DKITYTILLSEHLKQ 450
            ++ C   PNI  YN+ +DGLCK+  + EA EL++      L+   D +T++ L+    K 
Sbjct: 808  RKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 867

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
             +T +A  +F  M+  G  P++  Y  L+   C+  KM+ +    +  +  G+ P   TY
Sbjct: 868  GQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITY 927

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            + ++  + +  ++  A++    M   GC P+ +T+ ++I GLCK  +  EA Q ++ M  
Sbjct: 928  SVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL 987

Query: 571  K-GISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTVNTLIRKLCSEKRVGMA 628
            K G++P ++T  TL     + G +  A ++L+++ D   +    N  I  L    ++G  
Sbjct: 988  KHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTY--AFNCCINGL---SKLGDV 1042

Query: 629  ALFFHKLLGKDQNVDRVSLAAL-KNACYESN---KYALFSDL 666
            +   H++L  +   D+V+   L   AC   N     ALF ++
Sbjct: 1043 SRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 254/577 (44%), Gaps = 114/577 (19%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T T + ++   C+ G ++ A  VFD+M A G   +  +Y  +V   C+  ++  A   + 
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +M+D+G   D  T ++L+ AFC K  R  + +A ELL  M  +G  PNV T   +IDGLC
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFC-KASR--VDEALELLHGMASRGCTPNVVTFNSIIDGLC 476

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE----------- 356
           K   + +AF++F  +       P+  TY  +I G  +  +  +AE LL+           
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFN 536

Query: 357 --------------------RMKEQGLLPNTNTYTSLIYGHCKVGNFERAY--------- 387
                               RM E  L+P+  T+  LI G CK GNFE+A          
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 388 --------------------------DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
                                     D++DLMG  G  PN+  YNA++ GLCK GR++EA
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 422 YELLKK----------------------------AFQ--RELQA-----DKITYTILLSE 446
            + L++                            A Q   EL++     D +TY IL+  
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA---ITAGL 503
             K  +T+QA+ +   MV  G +PD+  Y TLI + C+   ++E+ +   +    ++   
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCC 776

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALISGLCKQSKLDEA 561
            P   TY+ +I G  + G I  A +  Q M +  C   P+ ITY + + GLCKQS + EA
Sbjct: 777 VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836

Query: 562 CQFYESMIGKG--ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLI 616
           C+   S+      +SP  VT  TL    CK G +  A  + + +    ++  V   N L+
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             LC   ++  A      ++ K    D ++ + L +A
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDA 933



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 233/530 (43%), Gaps = 88/530 (16%)

Query: 147  GNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
            GNFE+A  + + MV+                  + G+++    ++  M N G+P    T 
Sbjct: 581  GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 640

Query: 192  NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
            N +V   C+ G +E A +  +EM + G   D+ +Y  +V A CR  R  +A + +S +  
Sbjct: 641  NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700

Query: 252  RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             G   D  T  +L+      G     +QA  +LEEMV KG  P+V T+  LID LCK G 
Sbjct: 701  FGWDPDTVTYNILVDGLWKSG---QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757

Query: 312  TEKAFRL-------------------------FLKLVRSDNYK--------------PNV 332
             E+A RL                           K+ R D  +              PN+
Sbjct: 758  LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNI 817

Query: 333  HTYTAMISGYCKEEKMNRAEMLLERMKEQGLL--PNTNTYTSLIYGHCKVGNFERAYDLM 390
             TY + + G CK+  M  A  L+  +++  L   P+T T+++LI G CK G  + A ++ 
Sbjct: 818  ITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877

Query: 391  DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            D M   G  PN+  YN +++GLCK  +++ A+ +++    + +  D ITY++L+    K 
Sbjct: 878  DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-AITAGLFPTKET 509
            +   +AL L   M   G  P++  + ++I   C+  +  E+ + F +  +  GL P K T
Sbjct: 938  SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKIT 997

Query: 510  YTSMICGYLRDG----------------------------NISSAVKYFQRMNQIGCAPD 541
            Y ++I G  R G                             +    +   RM ++   PD
Sbjct: 998  YCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPD 1057

Query: 542  NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             +T+  LI+G CK    ++A   +E M+ K + P  +T   L    CK G
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 215/475 (45%), Gaps = 69/475 (14%)

Query: 143  LISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLI 187
            L  +G  E A + ++ MVSS                    R  +   +V E+ + G    
Sbjct: 647  LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706

Query: 188  TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW-- 245
            T T N +V    + G  E A  V +EM  +G   D  +Y  ++ + C+ G + EA R   
Sbjct: 707  TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766

Query: 246  -LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK----------- 293
             +S+ + R  + +  T ++LI   C  G    I +A EL++EM+RK              
Sbjct: 767  DMSSRVSRCCVPNVVTYSVLINGLCKVG---RIDEARELIQEMMRKSCDVLPNIITYNSF 823

Query: 294  ----------------------------PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                                        P+  T + LIDGLCK G T++A  +F  ++ +
Sbjct: 824  LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI-A 882

Query: 326  DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              Y PNV TY  +++G CK +KM RA  ++E M ++G+ P+  TY+ L+   CK  + + 
Sbjct: 883  GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942

Query: 386  AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-AFQRELQADKITYTILL 444
            A +L+  M   GCTPN+  +N+IIDGLCK  +  EA+++      +  L  DKITY  L+
Sbjct: 943  ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002

Query: 445  SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                +     QA  L      A  +PD +A+   I       K+ +  +     +   L 
Sbjct: 1003 DGLFRTGWAGQAEVLL----DAMPDPDTYAFNCCINGL---SKLGDVSRALHRMLELELV 1055

Query: 505  PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            P K T+  +I G  + GN   A   F+ M      PD +T+GALI GLCK  +++
Sbjct: 1056 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 220/502 (43%), Gaps = 79/502 (15%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFE 282
           + Y +++ + CR G    A       + R  +     T   +I   C     G+     E
Sbjct: 181 ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA---GME 237

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L EE+V +G  P+V T+  LID LCK G  E+A RL   +  S +  PNV TY+ +I+G 
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM-SSRSCVPNVVTYSVLINGL 296

Query: 343 CKEEKMNRAEMLLERM--KEQGLLPN---------------------------------- 366
           CK  +++ A  L++ M  K   +LPN                                  
Sbjct: 297 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 356

Query: 367 ---TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
              T T+++LI G CK G  + A  + D M   G  PN+  YNA+++GLCK  +++ A+ 
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +++    + +  D ITY++L+    K +   +AL L   M   G  P++  + ++I   C
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476

Query: 484 RQKKMKESEKFFQE-AITAGLFPTKETYTSMICGYLRD---------------------- 520
           +  +  E+ + F + A+  GL P K TY ++I G  R                       
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFN 536

Query: 521 ---------GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
                    G++S A++ + RM ++   PD +T+  LI+G CK    ++A   +E M+ K
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMA 628
            + P  +T   L    CK G    A  IL+   +L     + T N L+  LC   R+  A
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 629 ALFFHKLLGKDQNVDRVSLAAL 650
             F  +++      D ++  +L
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSL 678



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 168/353 (47%), Gaps = 10/353 (2%)

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V  + +++  LC+ G T +A  +F   +  D   P + TY  +I+G CK  ++     L 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           E + E+G  P+  TY +LI   CK G+ E A  L   M    C PN+  Y+ +I+GLCK 
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 416 GRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG---LNP 470
           GR+ EA EL+++  ++  ++  + ITY   L    KQ+ T +A  L  R ++ G   ++P
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSP 358

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   ++TLI   C+  ++ E+   F + I  G  P   TY +++ G  +   +  A    
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M   G  PD ITY  L+   CK S++DEA +    M  +G +P  VT  ++    CK 
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478

Query: 591 GDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
             S  A  + + +  K  +     T  TLI  L    R G A      +   D
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPD 531



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 31/266 (11%)

Query: 188  TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            T T + ++   C+ G  + A  VFD+M A G   +  +Y +++   C+  ++  A   + 
Sbjct: 854  TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913

Query: 248  AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +M+D+G   D  T ++L+ AFC       + +A ELL  M  +G  PNV T   +IDGLC
Sbjct: 914  SMVDKGVTPDVITYSVLVDAFCKASH---VDEALELLHGMASRGCTPNVVTFNSIIDGLC 970

Query: 308  KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE----------- 356
            K   + +AF++F  +       P+  TY  +I G  +     +AE+LL+           
Sbjct: 971  KSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFN 1030

Query: 357  -----------------RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
                             RM E  L+P+  T+  LI G CK GNFE+A  L + M  +   
Sbjct: 1031 CCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 1090

Query: 400  PNIYAYNAIIDGLCKKGRVQEAYELL 425
            P++  + A+IDGLCK G+V+  ++++
Sbjct: 1091 PDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 48/303 (15%)

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ-AETKQALGLF 460
           I+++N  ++ L K G   +A +L +       + +  TY+ LL    K   + ++ LG F
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 461 --------------------CR--------------MVKAGLNPDIHAYTTLIAAFCRQK 486
                               CR              M + G+ P I  Y T+I   C+  
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++    + F+E +  G  P   TY ++I    + G++  A +    M+   C P+ +TY 
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-----YCKQGDSATAMIILE 601
            LI+GLCK  ++DEA +  + M  K    C+V    + Y       CKQ  +A A  ++ 
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKS---CDVLPNIITYNSFLDGLCKQSMTAEACELMR 347

Query: 602 SL-DKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
           SL D  L +     T +TLI  LC   ++  A   F  ++      + ++  AL N   +
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 657 SNK 659
           ++K
Sbjct: 408 ADK 410


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 226/447 (50%), Gaps = 4/447 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    ++   + +  +M  NG      T N ++   C  GL++ A E+ DEM  RG
Sbjct: 83  VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++   C+ G++  A +      +     D    + LI   C  G    + 
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG---RLD 199

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L E+M     +P+V T T L+DGLCK    ++A ++ L+ +   N  PNV TY+++
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV-LETMEDRNCTPNVITYSSL 258

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A+ + +RM  +G+ PN  TY SLI+G C     + A  LM+ M   GC
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDGLCK GR  EA  L      +    D ITY+ L+    K      A  
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+K  + PD+  ++TL+  +C    + ++E+  +E + +   P   TYTS++ G+ 
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A +  +RM + GC P+ +TY ALI   C+  K   A +  E M+G G+ P  +
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK 605
           T  +L   +C  GD   A  +LE L++
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERLER 525



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 4/359 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV T T++IDGLCK     +A   F K+ +     PN  TY  +I+G+CK  K++RA +L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLL 64

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ MKE GL PN  TY+++I+G C+    + AY L   M + GC PN+  YN ++ GLC+
Sbjct: 65  LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G + EAYELL +  +R LQ DK +Y  L++   K  +   AL +F         PD+ A
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+TLIA  C+  ++ E+ K F++       P   T+T+++ G  +   +  A +  + M 
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
              C P+ ITY +LI GLCK  ++ +A + ++ MI +GI P  VT  +L + +C      
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +A++++E +        I T NTLI  LC   R   A   F  +  K  N D ++ + L
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 230/482 (47%), Gaps = 7/482 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +  RL E  +   +M   G      T N ++   C++  V  A  +  EM   G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  +CR  +V  A +    M++ G + +  T   L++  C  G    + 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL---MD 129

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+ELL+EM  +G +P+ +++  L+ GLCK G  + A ++F      D   P+V  Y+ +
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD-CPPDVVAYSTL 188

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  +++ A  L E+M+E    P+  T+T+L+ G CK    + A  +++ M    C
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  Y+++IDGLCK G+V++A E+ K+   R ++ + +TY  L+           AL 
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G  PDI  Y TLI   C+  +  E+ + F +       P   TY+ +I G+ 
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 368

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   I  A   F  M +    PD +T+  L+ G C    +D+A +  E M+    SP   
Sbjct: 369 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  +L   +CK G    A  +L+ + K+     + T   LI   C   +  +A     ++
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488

Query: 636 LG 637
           +G
Sbjct: 489 VG 490



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 13/429 (3%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           SNG+          +++   + GRL E   +  +M  N       T   ++   C+   +
Sbjct: 174 SNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 233

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A++V + M  R    +  +Y  ++   C+ G+V +A      M+ RG   +  T   L
Sbjct: 234 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I  FC       +  A  L+EEM   G  P++ T+  LIDGLCK G   +A RLF  + +
Sbjct: 294 IHGFC---MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-K 349

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           +    P+V TY+ +I G+CK E+++ A  L + M +Q +LP+  T+++L+ G+C  G  +
Sbjct: 350 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A  L++ M    C+P++Y Y +++DG CK GR+ EA  +LK+  +R  Q + +TYT L+
Sbjct: 410 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ-----EAI 499
               +  +   A  L   MV  G+ P++  Y +LI  FC    ++E+ K  +     E  
Sbjct: 470 DAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENC 529

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            A +F     Y  M+ G  R G +S+A++  + + Q G  P +  Y ALI GLC+  +L 
Sbjct: 530 KADMF----AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 585

Query: 560 EACQFYESM 568
           +A +  E M
Sbjct: 586 KAMEVLEEM 594



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 140/268 (52%), Gaps = 4/268 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  F ++ R+    ++  +M    +     T + +V   C  GLV+ AE + +EM A 
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               D  +Y  +V  +C++GR+ EA R L  M  RG   +  T T LI AFC  G     
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG---KP 478

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A++LLEEMV  G +PNV T+  LI G C  G  E+A ++  +L R +N K ++  Y  
Sbjct: 479 TVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRV 538

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG-KE 396
           M+ G C+  +M+ A  LLE +K+ G  P  + Y +LI G C+     +A ++++ M    
Sbjct: 539 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 598

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
              PN  AY A+I  L ++GR +EA  L
Sbjct: 599 KSRPNAEAYEAVIQELAREGRHEEANAL 626



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 40/285 (14%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N+  +  +IDGLCK  R+ EA     K  ++    ++ TY +L++   K  +  +A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M ++GL P++  Y+T+I  FCRQ K+  + K F++ +  G  P   TY +++ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 518 LRD-----------------------------------GNISSAVKYFQRMNQIGCAPDN 542
            R+                                   G I  A+K F+  +   C PD 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           + Y  LI+GLCK  +LDEAC+ +E M      P  VT   L    CK      A  +LE+
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQNV 642
           ++ +     + T ++LI  LC   +V  A   F +++  G + NV
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 3/225 (1%)

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           E + + IT+TI++    K     +A   F +M K G  P+   Y  LI  FC+  K+  +
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               +E   +GL P   TY+++I G+ R   + +A K F++M + GC P+ +TY  L+SG
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLW 608
           LC+   +DEA +  + M  +G+ P + +  TL    CK G    A+ + E   + D    
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +   +TLI  LC   R+  A   F K+       D V+  AL + 
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG 226



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 4/201 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F ++GR+ E   ++  M   G      T   ++   C  G    A ++ +EM   G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCDKGFRGSI 277
           V  +  +Y+ ++  +C  G + EA + L  +  D     D     +++   C  G    +
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG---RM 549

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A ELLE + + G  P    +  LI GLC+     KA  +  ++  S   +PN   Y A
Sbjct: 550 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 609

Query: 338 MISGYCKEEKMNRAEMLLERM 358
           +I    +E +   A  L + +
Sbjct: 610 VIQELAREGRHEEANALADEL 630


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 229/448 (51%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV +    G ++   +++  M + G+     T N V+      G  + A EVF  M A G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  S+ +++  +CR G + EA R+   M  R    D  + + LI  F     RG + 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR---RGEMD 316

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E L EM   G  P+   +T++I G C+ G   +A R+  ++V +    P+V TY  +
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV-AFGCLPDVVTYNTL 375

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CKE +++ AE LL  MKE+G+ P+  T+T+LI+G+C+ GN E+A    D +  +  
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDG+C++G + +A EL      RE+  + +TY+IL+  H ++ +   A  
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               MV  G+ P+I  Y ++I  +CR   + + ++F  +     + P   TY ++I GY+
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A    + M      PD +TY  +ISG      + EA   Y+ M  +GI P   
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRY 615

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T +++   +   G+S  +  + + + +K
Sbjct: 616 TYMSMINGHVVAGNSKKSFQLHDEMLQK 643



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 198/415 (47%), Gaps = 19/415 (4%)

Query: 143 LISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           L+ NG +++A EV + M               +  F   G L+E      EM    +   
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             + + ++G+    G +++A E   EM   G+  D   Y +++  +CR G + EA R   
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRD 358

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+  G + D  T   L+   C +     +  A ELL EM  +G  P++ T T LI G C
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKER---RLSDAEELLNEMKERGVPPDLCTFTTLIHGYC 415

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  EKA + F   +     +P++ TY  +I G C++  + +A  L + M  + + PN 
Sbjct: 416 RDGNIEKALQFF-DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNH 474

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY+ LI  HC+ G  + A+  +D M  +G  PNI  YN+II G C+ G V +  + L K
Sbjct: 475 VTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
               ++  D ITY  L+  ++K+ +  +A  L   M    + PD   Y  +I+ F     
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           M+E++  +++    G+ P + TY SMI G++  GN   + +    M Q G APD+
Sbjct: 595 MQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 189/374 (50%), Gaps = 11/374 (2%)

Query: 308 KKGW---TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           + GW   T  A+RL L    S N + N +T   M+  YCK  +    + ++  M+++ + 
Sbjct: 136 RAGWPHLTADAYRLVL----SSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVF 191

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T+  ++    + G+ E A  L+D M  +G  P +  YN+++ GL + GR  +A E+
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +      +  D  ++ +L+    +  E ++AL  +  M    + PD+ +++ LI  F R
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + +M  + ++ +E    GL P    YT +I G+ R G +  A++    M   GC PD +T
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL- 603
           Y  L++GLCK+ +L +A +    M  +G+ P   T  TL + YC+ G+   A+   +++ 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 604 DKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKY 660
           D++L   I T NTLI  +C +  +G A   +  +  ++   + V+ + L ++ C +    
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 661 ALFSDLSQRIAEGI 674
             F+ L + + +GI
Sbjct: 492 NAFAFLDEMVNKGI 505


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 227/447 (50%), Gaps = 7/447 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+ G V  AE +  ++    +  D  +Y  M++ +CR   +  A +  + M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T + LI   CD G    + +AF+L+ EM+  G  P  +T T  I  LC  G 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A+RLF+ + ++   +PNV+TYTA+ISG C    +  A  L  RM   G+ PNT TY 
Sbjct: 336 YEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI    +    + A+ +++LMG+ GC+PNI  YN +I G C  G  ++A  ++    QR
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
              A+ +TY  ++  +     T  AL +   M   G  PD  +YT LI  FC+  KM+ +
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E +  GL P + TYT++I GY +D  + +A    + M + GC P+  TY  LI G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR- 610
           L KQ+    A +  + MI +GI P  VT   +    CK G ++ A+ +   + ++  +  
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKL 635
             T ++LIR L  E +V  A   F +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL 661



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 228/482 (47%), Gaps = 13/482 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I +G    AH     +++   ++G  ++ + + ++M N G      T   ++   C  G
Sbjct: 311 MILHGILPTAHTCTGPIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L++ A  +F  M   GV  +  +Y  ++       R+  A   L+ M   G   +  T  
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  +C     G  K+A  ++  M+++G   N+ T+  +I G C  G T  A R+ L L
Sbjct: 430 EMIKGYC---ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI-LDL 485

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R    KP+  +YT +I G+CK  KM  A  L   M + GL PN  TYT+LI G+CK   
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L++ M + GC PN+  YN +I GL K+     A EL K   +  +  + +TYT 
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K   T  AL +F +M++ G  P++  Y++LI A  ++ K++E+E  F E    G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P + TY  MI  Y+  G +  A  +  RM + GC P   TYG LI GL  +  L  A 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL--AD 723

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           Q   ++      P  V   +  Y+   Q   +     L  LD  L ++  N L+  L + 
Sbjct: 724 QRLAAL------PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTA 777

Query: 623 KR 624
            R
Sbjct: 778 GR 779



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 215/458 (46%), Gaps = 44/458 (9%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A +VF++M   G   +  +Y  ++   C  GRV EA   +  M+  G +    T T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I A CD    G  + A+ L  +M  KG +PNVYT+T LI GLC  G  + A  LF ++ 
Sbjct: 326 PIIALCDM---GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 324 RSDNY----------------------------------KPNVHTYTAMISGYCKEEKMN 349
           R   +                                   PN+ TY  MI GYC      
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A +++  M ++G   N  TY ++I G+C  GN   A  ++DLM   GC P+ ++Y  +I
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G CK  +++ A+ L  +     L  +++TYT L+  + K  +   A  L   M ++G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++  Y  LI    +Q     +E+  +  I  G+FP   TYT+MI G  ++G+ S A++ 
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F +M + GC P+ +TY +LI  L ++ K++EA   +  +   G+ P E+T V +   Y  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 590 QGDSATAMIILESLDK-----KLWIRTVNTLIRKLCSE 622
            G    A   L  + K      LW  T   LI+ L +E
Sbjct: 683 SGKVEHAFNFLGRMIKAGCQPTLW--TYGVLIKGLKNE 718



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 232/528 (43%), Gaps = 67/528 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   E  R+K  F ++  M  NG      T N ++   C LG  + A  V + M  RG
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++  YC  G  T A R L  M D G   D  + T LI  FC       ++
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS---KME 512

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EMV  G  PN  T+T LIDG CK    + A  L   + RS   +PNV TY  +
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVL 571

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K+   + AE L + M E+G+ PN  TYT++I G CK G+   A ++ + M ++GC
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 399 TPNIYAYNAIIDGLCKKGRVQEA-----------------------------------YE 423
            PN+  Y+++I  L ++G+V+EA                                   + 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 424 LLKKAFQRELQADKITYTILL----SEHL-------------------KQAETKQALGLF 460
            L +  +   Q    TY +L+    +E+L                    Q   + A+ + 
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 461 CRMVKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              + A L+P   +     L++      +  E+ +     I+ GL P +E Y S++C  L
Sbjct: 752 SAKL-AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R  N+  A+  F+ M+  GC      Y  LI  LC+  +  EA   +E+M+ +  +P +V
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT--VNTLIRKLCSEKR 624
            +  L     + G     M  L  ++ + ++ +  + T++ +  S+KR
Sbjct: 871 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 22/363 (6%)

Query: 318 LFLKLVRSDNYKPNVHTYTA------------------MISGYCKEEKMNRAEMLLERMK 359
           LFL   RS +Y+P      A                  +I     +E M R    L+ + 
Sbjct: 113 LFLSRERSHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLS 172

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + GL      Y++L+    ++G      D    M  EG  PN+  YNA+I+ LCK G V 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  ++KK F+ E+  D  TYT ++  H ++ +   AL +F +M K G  P+   Y+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   ++ E+    +E I  G+ PT  T T  I      G    A + F  M   GC 
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  TY ALISGLC    L  A   +  M   G+ P  VT   L     +      A ++
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACY 655
           L  + +      I T N +I+  C       A L  + +L +  + + V+    +K  C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 656 ESN 658
             N
Sbjct: 473 SGN 475



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 3/156 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   +VS+ +  GR  E   ++  M + GL       N ++     +  V+ A  VF  
Sbjct: 765 QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 824

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  +G     + YK ++ A C++ R  EA      ML R    D+    +LI      G+
Sbjct: 825 MSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGY 884

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +       E L  M  + + P+ + +T+L     KK
Sbjct: 885 K---DLCMEFLHIMETRRYMPSFHIYTILAREASKK 917


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 227/447 (50%), Gaps = 7/447 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+ G V  AE +  ++    +  D  +Y  M++ +CR   +  A +  + M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T + LI   CD G    + +AF+L+ EM+  G  P  +T T  I  LC  G 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A+RLF+ + ++   +PNV+TYTA+ISG C    +  A  L  RM   G+ PNT TY 
Sbjct: 336 YEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI    +    + A+ +++LMG+ GC+PNI  YN +I G C  G  ++A  ++    QR
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
              A+ +TY  ++  +     T  AL +   M   G  PD  +YT LI  FC+  KM+ +
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E +  GL P + TYT++I GY +D  + +A    + M + GC P+  TY  LI G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR- 610
           L KQ+    A +  + MI +GI P  VT   +    CK G ++ A+ +   + ++  +  
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKL 635
             T ++LIR L  E +V  A   F +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL 661



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 228/482 (47%), Gaps = 13/482 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I +G    AH     +++   ++G  ++ + + ++M N G      T   ++   C  G
Sbjct: 311 MILHGILPTAHTCTGPIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           +++ A  +F  M   GV  +  +Y  ++       R+  A   L+ M   G   +  T  
Sbjct: 370 ILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  +C     G  K+A  ++  M+++G   N+ T+  +I G C  G T  A R+ L L
Sbjct: 430 EMIKGYC---ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI-LDL 485

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R    KP+  +YT +I G+CK  KM  A  L   M + GL PN  TYT+LI G+CK   
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L++ M + GC PN+  YN +I GL K+     A EL K   +  +  + +TYT 
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K   T  AL +F +M++ G  P++  Y++LI A  ++ K++E+E  F E    G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P + TY  MI  Y+  G +  A  +  RM + GC P   TYG LI GL  +  L  A 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL--AD 723

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           Q   ++      P  V   +  Y+   Q   +     L  LD  L ++  N L+  L + 
Sbjct: 724 QRLAAL------PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTA 777

Query: 623 KR 624
            R
Sbjct: 778 GR 779



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 215/458 (46%), Gaps = 44/458 (9%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A +VF++M   G   +  +Y  ++   C  GRV EA   +  M+  G +    T T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I A CD    G  + A+ L  +M  KG +PNVYT+T LI GLC  G  + A  LF ++ 
Sbjct: 326 PIIALCDM---GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382

Query: 324 RSDNY----------------------------------KPNVHTYTAMISGYCKEEKMN 349
           R   +                                   PN+ TY  MI GYC      
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A +++  M ++G   N  TY ++I G+C  GN   A  ++DLM   GC P+ ++Y  +I
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G CK  +++ A+ L  +     L  +++TYT L+  + K  +   A  L   M ++G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++  Y  LI    +Q     +E+  +  I  G+FP   TYT+MI G  ++G+ S A++ 
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F +M + GC P+ +TY +LI  L ++ K++EA   +  +   G+ P E+T V +   Y  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 590 QGDSATAMIILESLDK-----KLWIRTVNTLIRKLCSE 622
            G    A   L  + K      LW  T   LI+ L +E
Sbjct: 683 SGKVEHAFNFLGRMIKAGCQPTLW--TYGVLIKGLKNE 718



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 232/528 (43%), Gaps = 67/528 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   E  R+K  F ++  M  NG      T N ++   C LG  + A  V + M  RG
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++  YC  G  T A R L  M D G   D  + T LI  FC       ++
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS---KME 512

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EMV  G  PN  T+T LIDG CK    + A  L   + RS   +PNV TY  +
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVL 571

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K+   + AE L + M E+G+ PN  TYT++I G CK G+   A ++ + M ++GC
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 399 TPNIYAYNAIIDGLCKKGRVQEA-----------------------------------YE 423
            PN+  Y+++I  L ++G+V+EA                                   + 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 424 LLKKAFQRELQADKITYTILL----SEHL-------------------KQAETKQALGLF 460
            L +  +   Q    TY +L+    +E+L                    Q   + A+ + 
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 461 CRMVKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              + A L+P   +     L++      +  E+ +     I+ GL P +E Y S++C  L
Sbjct: 752 SAKL-AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R  N+  A+  F+ M+  GC      Y  LI  LC+  +  EA   +E+M+ +  +P +V
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT--VNTLIRKLCSEKR 624
            +  L     + G     M  L  ++ + ++ +  + T++ +  S+KR
Sbjct: 871 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 22/363 (6%)

Query: 318 LFLKLVRSDNYKPNVHTYTA------------------MISGYCKEEKMNRAEMLLERMK 359
           LFL   RS +Y+P      A                  +I     +E M R    L+ + 
Sbjct: 113 LFLSRERSHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLS 172

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + GL      Y++L+    ++G      D    M  EG  PN+  YNA+I+ LCK G V 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  ++KK F+ E+  D  TYT ++  H ++ +   AL +F +M K G  P+   Y+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   ++ E+    +E I  G+ PT  T T  I      G    A + F  M   GC 
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  TY ALISGLC    L  A   +  M   G+ P  VT   L     +      A ++
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACY 655
           L  + +      I T N +I+  C       A L  + +L +  + + V+    +K  C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 656 ESN 658
             N
Sbjct: 473 SGN 475



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 3/156 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   +VS+ +  GR  E   ++  M + GL       N ++     +  V+ A  VF  
Sbjct: 765 QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 824

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  +G     + YK ++ A C++ R  EA      ML R    D+    +LI      G+
Sbjct: 825 MSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGY 884

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +       E L  M  + + P+ + +T+L     KK
Sbjct: 885 K---DLCMEFLHIMETRRYMPSFHIYTILAREASKK 917


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 227/447 (50%), Gaps = 7/447 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+ G V  AE +  ++    +  D  +Y  M++ +CR   +  A +  + M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T + LI   CD G    + +AF+L+ EM+  G  P  +T T  I  LC  G 
Sbjct: 279 EGCEPNTVTYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A+RLF+ + ++   +PNV+TYTA+ISG C    +  A  L  RM   G+ PNT TY 
Sbjct: 336 YEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI    +    + A+ +++LMG+ GC+PNI  YN +I G C  G  ++A  ++    QR
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
              A+ +TY  ++  +     T  AL +   M   G  PD  +YT LI  FC+  KM+ +
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E +  GL P + TYT++I GY +D  + +A    + M + GC P+  TY  LI G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR- 610
           L KQ+    A +  + MI +GI P  VT   +    CK G ++ A+ +   + ++  +  
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKL 635
             T ++LIR L  E +V  A   F +L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL 661



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 228/482 (47%), Gaps = 13/482 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I +G    AH     +++   ++G  ++ + + ++M N G      T   ++   C  G
Sbjct: 311 MILHGILPTAHTCTGPIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L++ A  +F  M   GV  +  +Y  ++       R+  A   L+ M   G   +  T  
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  +C     G  K+A  ++  M+++G   N+ T+  +I G C  G T  A R+ L L
Sbjct: 430 EMIKGYC---ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI-LDL 485

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R    KP+  +YT +I G+CK  KM  A  L   M + GL PN  TYT+LI G+CK   
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L++ M + GC PN+  YN +I GL K+     A EL K   +  +  + +TYT 
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K   T  AL +F +M++ G  P++  Y++LI A  ++ K++E+E  F E    G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P + TY  MI  Y+  G +  A  +  RM + GC P   TYG LI GL  +  L  A 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL--AD 723

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           Q   ++      P  V   +  Y+   Q   +     L  LD  L ++  N L+  L + 
Sbjct: 724 QRLAAL------PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTA 777

Query: 623 KR 624
            R
Sbjct: 778 GR 779



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 215/458 (46%), Gaps = 44/458 (9%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A +VF++M   G   +  +Y  ++   C  GRV EA   +  M+  G +    T T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I A CD    G  + A+ L  +M  KG +PNVYT+T LI GLC  G  + A  LF ++ 
Sbjct: 326 PIIALCDM---GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 324 RSDNY----------------------------------KPNVHTYTAMISGYCKEEKMN 349
           R   +                                   PN+ TY  MI GYC      
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A +++  M ++G   N  TY ++I G+C  GN   A  ++DLM   GC P+ ++Y  +I
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G CK  +++ A+ L  +     L  +++TYT L+  + K  +   A  L   M ++G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++  Y  LI    +Q     +E+  +  I  G+FP   TYT+MI G  ++G+ S A++ 
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F +M + GC P+ +TY +LI  L ++ K++EA   +  +   G+ P E+T V +   Y  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 590 QGDSATAMIILESLDK-----KLWIRTVNTLIRKLCSE 622
            G    A   L  + K      LW  T   LI+ L +E
Sbjct: 683 SGKVEHAFNFLGRMIKAGCQPTLW--TYGVLIKGLKNE 718



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 232/528 (43%), Gaps = 67/528 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   E  R+K  F ++  M  NG      T N ++   C LG  + A  V + M  RG
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++  YC  G  T A R L  M D G   D  + T LI  FC       ++
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS---KME 512

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EMV  G  PN  T+T LIDG CK    + A  L   + RS   +PNV TY  +
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVL 571

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K+   + AE L + M E+G+ PN  TYT++I G CK G+   A ++ + M ++GC
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 399 TPNIYAYNAIIDGLCKKGRVQE-----------------------------------AYE 423
            PN+  Y+++I  L ++G+V+E                                   A+ 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 424 LLKKAFQRELQADKITYTILL----SEHL-------------------KQAETKQALGLF 460
            L +  +   Q    TY +L+    +E+L                    Q   + A+ + 
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 461 CRMVKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              + A L+P   +     L++      +  E+ +     I+ GL P +E Y S++C  L
Sbjct: 752 SAKL-AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R  N+  A+  F+ M+  GC      Y  LI  LC+  +  EA   +E+M+ +  +P +V
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT--VNTLIRKLCSEKR 624
            +  L     + G     M  L  ++ + ++ +  + T++ +  S+KR
Sbjct: 871 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 22/363 (6%)

Query: 318 LFLKLVRSDNYKPNVHTYTA------------------MISGYCKEEKMNRAEMLLERMK 359
           LFL   RS +Y+P      A                  +I     +E M R    L+ + 
Sbjct: 113 LFLSRERSHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLS 172

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + GL      Y++L+    ++G      D    M  EG  PN+  YNA+I+ LCK G V 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  ++KK F+ E+  D  TYT ++  H ++ +   AL +F +M K G  P+   Y+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   ++ E+    +E I  G+ PT  T T  I      G    A + F  M   GC 
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  TY ALISGLC    L  A   +  M   G+ P  VT   L     +      A ++
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACY 655
           L  + +      I T N +I+  C       A L  + +L +  + + V+    +K  C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 656 ESN 658
             N
Sbjct: 473 SGN 475



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 143/395 (36%), Gaps = 81/395 (20%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           R  ++ Y V    L    NF  A E+ + M+         +EG            P + +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMI---------EEGI----------FPNVVT 602

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
               + G+ C+ G    A E+F++M  +G   +  +Y  ++ A  + G+V EA+   + +
Sbjct: 603 YTAMIDGL-CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL--- 306
              G I D  T   +I A+      G ++ AF  L  M++ G +P ++T+ VLI GL   
Sbjct: 662 ERHGLIPDEITYVKMIEAYI---MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718

Query: 307 -----------------CKKGW---TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
                            C  G+    + A  +    +   +   +V    A++S      
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +   A  LL  M  QGL P+   Y SL+    +V N + A  +   M  +GC  ++  Y 
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 407 -----------------------------------AIIDGLCKKGRVQEAYELLKKAFQR 431
                                               +IDGL + G      E L     R
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
                   YTIL  E  K+   K   G   ++ +A
Sbjct: 899 RYMPSFHIYTILAREASKKRSWKHVAGCITKVKRA 933


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 261/536 (48%), Gaps = 40/536 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S+ +  +L EG      +   G  +  +  N ++G   ++G V+ A EV++E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +  +MV A C+  ++ +   +L  M  +G   D  T   LI A+C +G  
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV----------- 323
           G   +AFE++  M  KG KP ++T+  +I+GLCKKG   +A  +F +++           
Sbjct: 237 G---EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 324 --------RSDNY---------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                   R++N+                P++ +++++I    +   +++A M    MK 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            GL+P+   YT LI G+C+ G    A ++ D M ++GC  ++ AYN I++GLCKK  + +
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  L  +  +R +  D  T+T L+  H K+    +AL LF  M +  + PDI  Y  LI 
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+  +M+++ + + E I+  +FP   +Y  ++ GY   G +S A + +  M + G  P
Sbjct: 474 GFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
             +T   +I G C+   L +A +F   MI +G+ P  +T  TL   + K      A  ++
Sbjct: 534 TLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLI 593

Query: 601 ESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             ++ K     + T N ++   C + R+  A L   K++ +  + DR +   L N 
Sbjct: 594 NKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 223/438 (50%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   G L E F ++  M+  GL     T N V+   C+ G    A+ VF+EM + G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D ++Y  ++V  CR     EA    S ML RG   D  + + LI         G + 
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV---SSRNGHLD 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA     +M   G  P+   +T+LI+G C+ G   +A  +  K++       +V  Y  +
Sbjct: 343 QALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQ-GCALDVVAYNTI 401

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK++ +  A  L + M E+G++P+  T+T+LI+GHCK GN  +A  L  +M ++  
Sbjct: 402 LNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI 461

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +IDG CK   +++A EL  +   R++  + I+Y IL++ +       +A  
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M++ G+ P +    T+I  +CR   + ++++F  + I+ G+ P   TY ++I G++
Sbjct: 522 LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV 581

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A     +M   G  PD +TY  +++G C+Q ++ EA      MI +GI P   
Sbjct: 582 KGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRS 641

Query: 579 TRVTLAYEYCKQGDSATA 596
           T  TL   Y  Q +   A
Sbjct: 642 TYTTLINGYVSQDNLKEA 659



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 196/388 (50%), Gaps = 10/388 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V  C  ++F E    K+ FS   +M + G+     + + ++G++   G ++ A   F +M
Sbjct: 298 VESCRNNNFLEA---KDIFS---DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D   Y +++  YCR G ++EA      ML++G  LD      ++   C K   
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL- 410

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  L +EMV +G  P+  T T LI G CK+G   KA  LF  ++   N KP++ T
Sbjct: 411 --LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF-GIMTQKNIKPDIVT 467

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G+CK  +M +A  L   M  + + PN  +Y  L+ G+C +G    A+ L D M 
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  P +   N +I G C+ G + +A E L K     +  D ITY  L++  +K     
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMD 587

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L  +M   GL PD+  Y  ++  FCRQ +M+E+E   ++ I  G+ P + TYT++I
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            GY+   N+  A ++   M Q G  PD+
Sbjct: 648 NGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 225/436 (51%), Gaps = 9/436 (2%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
           +DA +  L ++    + RV   +  +S     G  +DN    LLI ++            
Sbjct: 80  SDAQTLILRMIRRSGVSRVEIVESLISMSSTCG--VDNLVFDLLIRSYVQARKLNEGTDT 137

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           F++L    RKG+  ++     L+ GL K GW + A+ ++ ++ RS   + NV+T   M++
Sbjct: 138 FKILR---RKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS-GIELNVYTLNIMVN 193

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
             CK+ K++  +  L  M+++G+  +  TY +LI  +C+ G    A+++M+ M  +G  P
Sbjct: 194 ALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKP 253

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
            ++ YNA+I+GLCKKGR   A  +  +     L  D  TY  LL E  +     +A  +F
Sbjct: 254 TLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIF 313

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M+  G++PD+ ++++LI    R   + ++  +F++  T+GL P    YT +I GY R+
Sbjct: 314 SDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G +S A++   +M + GCA D + Y  +++GLCK+  L +A   ++ M+ +G+ P   T 
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433

Query: 581 VTLAYEYCKQGDSATAMI---ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL + +CK+G+   A+    I+   + K  I T N LI   C    +  A   +++++ 
Sbjct: 434 TTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMIS 493

Query: 638 KDQNVDRVSLAALKNA 653
           +    + +S A L N 
Sbjct: 494 RKIFPNHISYAILVNG 509


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 254/507 (50%), Gaps = 29/507 (5%)

Query: 103 VVASLANEAGSMVALSFFYWAI----GFA----KFRHFMRLYIVCATSLISNGNFERAHE 154
           VV SL +   + +AL+FF WA     GF+     +   +++ + C       G+  R+  
Sbjct: 49  VVNSLKD---AKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHR-EAGDLFRSEL 104

Query: 155 VMQC---------MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           +  C         ++S F   G L     ++ EM + G      T   ++      G ++
Sbjct: 105 LASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD 164

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A    D + + G   +  +Y  ++ A+ R  ++ EA + L  M +RG   +  T  +L+
Sbjct: 165 GA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 221

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            A C     G+   A +++++M+  G+ PNV T   L+DG CK+G  + A R  L ++ +
Sbjct: 222 DALCKLSMVGA---AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA-RKLLGIMVA 277

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              +PNV TY+A+I G CK +K   A+ +LE MK +G+ P+  TY++LI+G CK    E 
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEE 337

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  ++  M   GCTP++  Y++II   CK G++ EA + L++  ++    D +TY  ++ 
Sbjct: 338 AEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 397

Query: 446 EHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
              K  +  +A  +  +M ++G + PD+  Y+T+I   C+   + E++K       AG  
Sbjct: 398 GLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN 457

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TYT++I G  + G +  A    Q M + GCAP+ +TY  LISGLCK  K+DEA + 
Sbjct: 458 PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERV 517

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQG 591
            E M   G  P  VT  T+    C  G
Sbjct: 518 MEEMRNAGCPPNLVTYNTMVNGLCVSG 544



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 215/413 (52%), Gaps = 7/413 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++FA   +L+E   ++ EM   G P    T N +V   C+L +V  A++V  +M   G
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  +V  +C+ G V +A + L  M+ +G   +  T + LI   C         
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ---KFL 301

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+LEEM  +G  P+ +T++ LI GLCK    E+A ++  ++  S    P+V  Y+++
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 360

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I  +CK  K+  A+  L+ M++Q   P+  TY ++I G CK+G    A  +++ M + G 
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  Y+ +I+GLCK   + EA +LL +  +     D +TYT ++    K    ++A 
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +AG  P++  YTTLI+  C+ +K+ E+E+  +E   AG  P   TY +M+ G 
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540

Query: 518 LRDGNISSAVKYFQRM--NQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
              G I  A +  QRM   +  C+PD  TY  +++ L     + EA Q  E M
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 222/456 (48%), Gaps = 11/456 (2%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  SY +++  +C  G +  A   L  M   G   D  T T +ITA  + G    +  A 
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAM 167

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           + L  M   G  PNV T+T LI    +    E+A +L L+ +R     PN+ TY  ++  
Sbjct: 168 DHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKL-LEEMRERGCPPNLVTYNVLVDA 223

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK   +  A+ ++++M E G  PN  T+ SL+ G CK GN + A  L+ +M  +G  PN
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  Y+A+IDGLCK  +  EA E+L++   R +  D  TY+ L+    K  + ++A  +  
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           RM  +G  PD+  Y+++I AFC+  K+ E++K  QE       P   TY ++I G  + G
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403

Query: 522 NISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
            I+ A    ++M + G   PD +TY  +I+GLCK   L EA +  + M   G +P  VT 
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 463

Query: 581 VTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            T+    CK G    A  +L+ + +      + T  TLI  LC  ++V  A     ++  
Sbjct: 464 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 523

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
                + V+   + N    S +      L QR+ +G
Sbjct: 524 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 177/353 (50%), Gaps = 5/353 (1%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F         +V  F + G + +   ++  M   G+     T + ++   C+      
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV +EM  RGV  DA +Y  ++   C+  ++ EA++ L  M   G   D    + +I 
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           AFC  G    + +A + L+EM ++   P+V T+  +IDGLCK G   +A  +  ++  S 
Sbjct: 363 AFCKSG---KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +  P+V TY+ +I+G CK + +  A+ LL+RM + G  P+  TYT++I G CK G  E A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+  M + GC PN+  Y  +I GLCK  +V EA  ++++        + +TY  +++ 
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 447 HLKQAETKQALGLFCRMV--KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
                  K+A  L  RM   +A  +PD   Y T++ A      ++E+E+  ++
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 2/190 (1%)

Query: 486 KKMKESEKFFQ--EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           K  K +  FF+   A   G   T  ++ S++   +R      A   F+      C PD  
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +Y  +ISG C    L  A +  E M   G +P   T   +       GD   AM  L S+
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM 173

Query: 604 DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALF 663
                + T   LI      K++  A     ++  +    + V+   L +A  + +     
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233

Query: 664 SDLSQRIAEG 673
            D+ +++ EG
Sbjct: 234 QDVVKKMIEG 243


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 184/689 (26%), Positives = 296/689 (42%), Gaps = 61/689 (8%)

Query: 15  KPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYY 74
           KP +T       +  +C+  H   FL  S Q   S+ SS P P   L  +  +       
Sbjct: 3   KPHKT-------LPRMCF--HSLYFLLGSHQS--SNFSSQPHPSSPLSISSNTDPFPELV 51

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHE-QAITVVASLANEAGSMVALSFFYWAIGFAKFRHFM 133
            +  +  S P      ++  L  + +   VV  L     +   L FF+W      F+H M
Sbjct: 52  SKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDM 111

Query: 134 RLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKE---------------------- 171
             ++     L+ +  F  A  V   M+ S    G +K                       
Sbjct: 112 SCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFS 171

Query: 172 --------------GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
                         G  + IEM N+G+     T N ++ I C  G V+ AE +   +   
Sbjct: 172 TLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHY 231

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G C D  +Y  +++ +C+ G +  A      M+  G   ++ T + LI   C +G    +
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEG---RL 288

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A ++LEEM+ KG +P V+ +T+ I  LC  G + +A +L  K+ +     PNV TYTA
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM-KKRGCGPNVQTYTA 347

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +ISG  ++ K   A  +  +M   GL+P   TY++LI      G FE A  + + M    
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   YN II G C  G +Q+A  +  +  +     + ITY I++  + KQ     A+
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   GL  D   Y  LI+ F R  K++ +   F E +  G+ P   TY ++I GY
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           L    +  A+  F +M + G  P + TY  +ISG  K +++ EA  F   M+ +G+ P  
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           +T  +     CK G ++ A  I   + K+ +     T ++LI  LC E +   A      
Sbjct: 588 ITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647

Query: 635 LLGKDQNVDRVSLAAL----KNACYESNK 659
             G + NVD  +        K  CYE+++
Sbjct: 648 --GCEPNVDTYTTLVRGLCGKGRCYEADQ 674



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 227/519 (43%), Gaps = 40/519 (7%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L   F M   M  +G    + T + ++   C  G +E A ++ +EM  +G+     +Y
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------- 272
            + +V+ C  GR  EA + L  M  RG   +  T T LI+     G              
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 273 ------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                               G  + A  + E M+     PN  T+ V+I G C  G+ +K
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  +F +++++    PNV TY  +I  Y K+  MN A  LLE MK  GL  +T TY +LI
Sbjct: 431 ATAIFDQMLKA-GPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLI 489

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G  + G  E A+ L + M + G +PN+  YNAII+G     +V +A  L  K  +    
Sbjct: 490 SGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV 549

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
               TY +++S   K     +A     +MVK GL P++  YT+ I   C+  +   + K 
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKI 609

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E      FP   TY+S+I G  ++G    A    +R+   GC P+  TY  L+ GLC 
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCG 665

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
           + +  EA Q  ESM  KG+ P E     L    CK  +  +A+ I +S+    +   +  
Sbjct: 666 KGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              LI  LC       A   F  +L K  N D V    L
Sbjct: 726 YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVL 764



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 199/413 (48%), Gaps = 9/413 (2%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           ++++ LP  T T N ++   C +G ++ A  +FD+M   G   +  +Y +++  Y + G 
Sbjct: 404 LSHDSLP-NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A R L  M   G  LD  T   LI+ F  +G  G ++ AF L  EMV  G  PNV T
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGF-SRG--GKLEHAFSLFNEMVEHGISPNVVT 519

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  +I+G       + A  LF K+V S N  P+  TY  MISG+ K  +++ AE    +M
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNV-PSSGTYNMMISGFSKTNRISEAENFCGKM 578

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            +QGLLPN  TYTS I G CK G    A+ +   M K    PN+  Y+++IDGLC++G+ 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  LL    +  +     TYT L+     +    +A  L   M K GL P    Y  L
Sbjct: 639 EDAERLLDDGCEPNVD----TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +   C+  +++ + K F   +T G  P    Y ++IC   +      A   FQ M +   
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             D + +  L+ GL K+ + D + +    M  +  +    TRV LA E    G
Sbjct: 755 NSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 217/448 (48%), Gaps = 8/448 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  +  G+ +    +  +M  +GL     T + ++      G  E A  +F+ M +  
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++  +C +G + +A      ML  G   +  T  ++I  +  +G+   + 
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY---MN 464

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LLE M   G K + +T+  LI G  + G  E AF LF ++V      PNV TY A+
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH-GISPNVVTYNAI 523

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GY    K++ A  L  +M E G +P++ TY  +I G  K      A +    M K+G 
Sbjct: 524 INGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGL 583

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y + IDGLCK GR   A+++  +  +R+   +  TY+ L+    ++ + + A  
Sbjct: 584 LPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE- 642

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              R++  G  P++  YTTL+   C + +  E+++  +     GL P++E Y +++ G  
Sbjct: 643 ---RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQC 699

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++  + SA+K F  M   G  P    Y ALI  LCK +   +A   +++M+ K  +  EV
Sbjct: 700 KNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
               L     K+G++  ++ +L  ++ +
Sbjct: 760 VWTVLLDGLLKEGETDLSLELLHVMESR 787


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 193/745 (25%), Positives = 327/745 (43%), Gaps = 129/745 (17%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSS--PPRLNLQIDIDSLTHEQA 100
           S + A  S+S + +  +  V+ + ++ L S+  Q  + SS  P +LN  I I S+     
Sbjct: 8   SHKAASFSSSQALTQNEDSVREITTL-LNSHNWQALMESSDIPKKLNTDI-IRSVI---- 61

Query: 101 ITVVASLANEAGS-MVALSFFYWA---IGFAKFRHFMRLYIVCATSLISNGNFERAHEVM 156
                 L N+ G     L+FFYW+   +G +  +  + +    A +L ++  +  A +++
Sbjct: 62  ------LQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLI 115

Query: 157 QCMV---------------------------------SSFAEIGRLKEGFSMVIEMTNNG 183
           +C++                                  S+ ++G L E  ++ +   N  
Sbjct: 116 KCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 175

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                 + N ++G   +   VE   +VFD MCA  V  D  +Y  M+ A+C++G V +A 
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235

Query: 244 RWL-----------------------------------SAMLDRGAILDNATLTLLITAF 268
           R L                                    +M+D+G + D  T  +LI  F
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C        ++A  +L EM+  G KP   T+  LIDG  ++G  E+AFR+  ++V     
Sbjct: 296 C---MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GI 351

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           + N+  +  +++G CK  KM +A  +++ M E+G+ P++ TY+ LI GHC+  N  RA++
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+D M K    P +  Y+ II+GLC+ G +Q    +L++     L+ + + YT L++ H 
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+   +++  +  RM + G+ PD+  Y +LI  FC+ K+M+E+  +  E +   L P   
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAP---------------------------- 540
           TY + I GY + G +  A +YF  M   G  P                            
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 541 -------DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                  D  TY  LI GL +  K+ EA   +  +  KG+ P   T  +L    CKQG+ 
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A  +LE +  K     I T N LI  LC    +  A   F  + G+    + V+ AA+
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 711

Query: 651 KNA-CYESNKYALFSDLSQRIAEGI 674
            +  C   N  A F  L + +  G+
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGV 736



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 256/530 (48%), Gaps = 43/530 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F    R +E   M++EM + GL     T N ++      G +E A  + DEM A G
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SI 277
           + A+   +  ++   C+ G++ +A   +  M+++G   D+ T +LLI   C    RG ++
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC----RGQNM 406

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AFELL+EM ++   P V T++V+I+GLC+ G  +    +  ++V  +  KPN   YT 
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM-NGLKPNAVVYTT 465

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD-LMDLMGKE 396
           +++ + KE ++  + M+LERM+EQG+LP+   Y SLI G CK    E A   LM+++ + 
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 397 ----------------------------------GCTPNIYAYNAIIDGLCKKGRVQEAY 422
                                             G  PN+  Y A+I+G CK+G V EA+
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            + +    R +  D  TY++L+    +  +  +A G+F  + + GL P+   Y +LI+  
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q  + ++ +  +E    G+ P   TY  +I G  + G I  A   F  +   G  P+ 
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY A++ G CK      A Q  E M+ +G+ P       +    CK+     A+ + + 
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765

Query: 603 LDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + +K +  TV  NTLI   C   ++  A     +++ K    + V+  +L
Sbjct: 766 MLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 239/578 (41%), Gaps = 87/578 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G +++ F +  EM   G+       N ++   C+ G +E A E+  EM  +G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF----- 273
           V  D+ +Y L++  +CR   +  A   L  M  R       T +++I   C  G      
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 274 ---------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G ++++  +LE M  +G  P+V+ +  LI G 
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK    E+A R +L  +     +PN HTY A I GY K  +M  A+     M   G+LPN
Sbjct: 506 CKAKRMEEA-RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YT+LI GHCK GN   A+ +   +       ++  Y+ +I GL + G++ EA+ +  
Sbjct: 565 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 624

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  ++ L  +  TY  L+S   KQ    +A  L   M   G+NPDI  Y  LI   C+  
Sbjct: 625 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD----- 541
           +++ ++  F +    GL P   TY +M+ GY +  N ++A +  + M   G  PD     
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744

Query: 542 -----------------------------NITYGALISGLCKQSKLDEACQFYESMIGKG 572
                                         +++  LI G CK  KL EA    E MI K 
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-----------RTVNTLIRKLCS 621
             P  VT  +L    CK G    A        K+LW+           +T  +L+    +
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEA--------KRLWLEMQERNVMPTAKTYTSLLHGYHN 856

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
              +   +  F +++ K    D+++   + +A C E N
Sbjct: 857 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 227/493 (46%), Gaps = 42/493 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +  R++E  + ++EM    L     T    +    + G +E A+  F+EM + G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
           V  +   Y  ++  +C+ G VTEA      +L R  + D  T ++LI             
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 270 -------DKGF----------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                  +KG                 +G++ +A +LLEEM  KG  P++ T+ +LIDGL
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G  E+A  LF   +      PN  TY AM+ GYCK +    A  LLE M  +G+ P+
Sbjct: 681 CKAGEIERAKNLFDD-IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y  ++   CK   FE+A DL   M ++G    + ++N +I+G CK G++QEA  LL+
Sbjct: 740 AFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLE 798

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  +++   + +TYT L+  + K     +A  L+  M +  + P    YT+L+  +    
Sbjct: 799 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 858

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            M E    F+E +  G+ P K TY  MI  Y R+GN+  A K    +   G       Y 
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYD 918

Query: 547 ALISGLCKQSKLDEACQFY----ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           ALI  LCK+ +  E  +      ES    G+  C V    +A  +   G+   A  +L S
Sbjct: 919 ALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSV----IARGFQIAGNMDEAAEVLRS 974

Query: 603 LDKKLWIRTVNTL 615
           + K  W+    +L
Sbjct: 975 MVKFGWVSNTTSL 987



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 5/393 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   +  G++ E F +  E+   GL     T N ++  +C+ G V+ A ++ +EMC +G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++   C+ G +  A      +  RG   +  T   ++  +C      +  
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK---NPT 722

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+LLEEM+ +G  P+ + + V+++  CK+   EKA  LF +++    +   V ++  +
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTV-SFNTL 780

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK  K+  A  LLE M E+  +PN  TYTSLI  +CK G    A  L   M +   
Sbjct: 781 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 840

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    Y +++ G    G + E   L ++   + ++ DK+TY +++  + ++    +A  
Sbjct: 841 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   ++  G+   + AY  LI A C++++  E  K   E   +G      T + +  G+ 
Sbjct: 901 LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             GN+  A +  + M + G   +  + G L+ G
Sbjct: 961 IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 34/301 (11%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            MV  + +       F ++ EM   G+P      N ++   C+    E A ++F EM  +G
Sbjct: 711  MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              A   S+  ++  YC+ G++ EA+  L  M+++  I ++ T T LI   C  G  G  K
Sbjct: 771  F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829

Query: 279  QAF--------------------------------ELLEEMVRKGWKPNVYTHTVLIDGL 306
            + +                                 L EEMV KG +P+  T+ V+ID  
Sbjct: 830  RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889

Query: 307  CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            C++G   +A +L  +++       +V  Y A+I   CK+E+      LL  + E G    
Sbjct: 890  CREGNVMEACKLKDEIL-VKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLG 948

Query: 367  TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              T + +  G    GN + A +++  M K G   N  +   ++DG       +++  LLK
Sbjct: 949  LPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLK 1008

Query: 427  K 427
            +
Sbjct: 1009 Q 1009



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 32/189 (16%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F   H     ++    + G + E   + +EM    +     T   ++     +G +    
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 864

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +F+EM A+G+  D  +Y +M+ AYCR G V EA +    +L +G  +  A    LI A 
Sbjct: 865 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQAL 924

Query: 269 CDK----------------GFR----------------GSIKQAFELLEEMVRKGWKPNV 296
           C K                GFR                G++ +A E+L  MV+ GW  N 
Sbjct: 925 CKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNT 984

Query: 297 YTHTVLIDG 305
            +   L+DG
Sbjct: 985 TSLGDLVDG 993


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 224/467 (47%), Gaps = 41/467 (8%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           F  +G +   FS+  ++   G  L T  LN V+   C  G V  A E  DE+   G   +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAML-------DRGAILDNATLTLLI------TAFC 269
             SY +++   C  GRV EA   L  +        D   +  N  +  ++        F 
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 270 DKGFR---------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
           D+GF                            G   + F L++EM+R+G   +VY  TVL
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDGLCK G   +A  +F ++V +  Y+PN+ T TA++ GYC +  ++ A  L + + E G
Sbjct: 262 IDGLCKNGMLVEAREMFDEMV-NRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
              +  TY   I+G+CKVG    A  + D M +EG  PNI  YN++ID LCK G V  A+
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E++K   +  L  D +T  ILL    K     QA+ LF ++V++GL PD+ +YT LI   
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C  ++M E+    ++     L P   TY+ +I G  R G IS+A +    M+  G  PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           ITY  L+  L K+  LDEA   +  MI +G+ P  +    +   YCK
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCK 547



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G+  EGF +V EM   GL +       ++   C+ G++  A E+FDEM  RG
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +   ++  YC  G V  A     A+ + G   D  T  + I  +C  G    ++
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG---RVR 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  + +EM R+G  PN+ T+  LID LCK G    A+ +   + RS    P++ T   +
Sbjct: 343 DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRS-GLTPDIVTCCIL 401

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK +++++A +L  ++ E GL P+  +YT LI+G C       A +L+  M  +  
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ +IDGLC+ GR+  A+ LL +   +    D ITY+ILL    K+    +A+ 
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF 521

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +M+K GL PD+  YT +I  +C+ +++ E+   F+E     L P   TYT +     
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + G+ S   K+   +  I   P  + Y   ++ LCK   LD  C
Sbjct: 582 KSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLDYKC 622



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 192/401 (47%), Gaps = 4/401 (0%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C  G V+   E ++EM   GVC +  +Y  ++   C +G+  E    +  M+ RG
Sbjct: 191 VIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG 250

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             +     T+LI   C  G    + +A E+ +EMV +G++PN+ T T L+ G C KG  +
Sbjct: 251 LDVSVYVFTVLIDGLCKNGM---LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVD 307

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  LF   +    +K +V TY   I GYCK  ++  A  + + M  +G++PN  TY SL
Sbjct: 308 MARELF-DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I   CK G    A++++  M + G TP+I     ++DGLCK  R+ +A  L  +  +  L
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D  +YTIL+          +A+ L   M    L P I  Y+ LI   CR  ++  + +
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              E    G  P   TY+ ++    +  ++  AV  F +M + G  PD + Y  +I G C
Sbjct: 487 LLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           K  ++DEA   +  M  K + P  VT   L     K G ++
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 204/435 (46%), Gaps = 15/435 (3%)

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           +  +G V+ +      +L RG  LD   L  ++   C     G + +A E  +E+V  G+
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLC---VNGGVLKALEFHDEIVNNGF 138

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY--KPNVHTYTAMISGYCK 344
             N  ++ +LI+GLC+ G   +A  L L+++        D +  K NV  Y+ +I   C+
Sbjct: 139 SLNEVSYGILINGLCENGRVNEAVNL-LRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCR 197

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              ++        M   G+ PN  TY SLI G C VG F   + L+D M + G   ++Y 
Sbjct: 198 NGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYV 257

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +  +IDGLCK G + EA E+  +   R  + + +T T L+  +  +     A  LF  + 
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G   D+  Y   I  +C+  +++++ + F E    G+ P   TY S+I    + G +S
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +  + M++ G  PD +T   L+ GLCK  +LD+A   +  ++  G++P   +   L 
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 585 YEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
           +  C       AM +L  +  K     I T + LI  LC   R+  A    +++  K   
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 642 VDRVSLAALKNACYE 656
            D ++ + L +A ++
Sbjct: 498 PDTITYSILLDALWK 512



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 31/388 (7%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +  +F +  +++++G+  +      ++ GLC  G   KA     ++V ++ +  N  +
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIV-NNGFSLNEVS 144

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+G C+  ++N A  LL RM E+      +            G F +         
Sbjct: 145 YGILINGLCENGRVNEAVNLL-RMIEKEKEKEKD------------GFFVKG-------- 183

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
                 N+  Y+ +ID LC+ G V E +E   +     +  ++ TY  L+       +  
Sbjct: 184 ------NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFL 237

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +  GL   M++ GL+  ++ +T LI   C+   + E+ + F E +  G  P   T T+++
Sbjct: 238 EGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   GN+  A + F  + + G   D  TY   I G CK  ++ +A + ++ M  +G+ 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  +L    CK G+ + A  I++++ +      I T   L+  LC  KR+  A L 
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNK 659
           F++L+      D  S   L + C  S +
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRR 445


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 230/434 (52%), Gaps = 7/434 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N++VG   ++     A  +F +M  +G+  D  +  +++  +C +G++T +   L  +L 
Sbjct: 14  NKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILK 73

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  TL  L+   C    +G +K++    +++V +G++ +  ++  L++GLCK G 
Sbjct: 74  LGYQPNTITLNTLMKGLC---LKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           T  A +L L+++   + +PNV  Y  +I G CK++ +N A  L   M  +G+ PN  TY+
Sbjct: 131 TRSALKL-LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LIYG C  G    A+ L++ M  +   PN+Y Y  ++D LCK+G+V+EA  LL    + 
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++ + ++Y  L+  +    E + A  +F  MV+ G+NP++++Y  +I   C+ K++ E+
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               +E +   + P   TY+S+I G+ + G I+SA+   + M   G   D +TY +L+  
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LW 608
           LCK   LD+A   +  M  +GI P + T   L    CK G    A  + + L  K   + 
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRIN 429

Query: 609 IRTVNTLIRKLCSE 622
           + T N +I  LC E
Sbjct: 430 VWTYNVMISGLCKE 443



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 216/424 (50%), Gaps = 4/424 (0%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++   F+++ ++   G    T TLN ++   C  G V+ +    D++ 
Sbjct: 48  LNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVV 107

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY  ++   C++G    A + L  + DR    +      +I   C      
Sbjct: 108 AQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKL-- 165

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A++L  EM  +G  PNV T++ LI G C  G   +AF L  +++   N  PNV+TY
Sbjct: 166 -VNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILK-NINPNVYTY 223

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T ++   CKE K+  A+ LL  M ++G+ PN  +Y +L+ G+C +G  + A  +   M +
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  PN+Y+YN +ID LCK  RV EA  LL++   + +  + +TY+ L+    K      
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L   M   G   D+  YT+L+ A C+ + + ++   F +    G+ P K TYT++I 
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G   +A K FQ +   GC  +  TY  +ISGLCK+  LDEA      M   G  P
Sbjct: 404 GLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIP 463

Query: 576 CEVT 579
             VT
Sbjct: 464 DAVT 467



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G+L E F ++ EM    +     T   ++   C+ G V+ A+ +   M   G
Sbjct: 191 LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  SY  ++  YC +G V  A +    M+ +G   +  +  ++I   C       + 
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS---KRVD 307

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL E++ K   PN  T++ LIDG CK G    A  L LK +       +V TYT++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL-LKEMYHRGQPADVVTYTSL 366

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK + +++A  L  +MKE+G+ PN  TYT+LI G CK G  + A  L   +  +GC
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N++ YN +I GLCK+G + EA  +  K  +     D +T+ I++    ++ +  +A  
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEK 486

Query: 459 LFCRMVKAGL--NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           L   M+   L    D H   +         +  ++EK   E I  GL 
Sbjct: 487 LLHEMIAKDLLRFRDFHGERS-------PNENDKAEKLLHEMIAKGLL 527



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 151/324 (46%), Gaps = 3/324 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P +  +  ++    K +    A  L ++M+ +G+ P+  T   LI   C +G    ++ +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  + K G  PN    N ++ GLC KG V+++     K   +  Q D+++Y  LL+   K
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             ET+ AL L   +      P++  Y T+I   C+ K + E+   + E    G+FP   T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+++I G+   G +  A      M      P+  TY  L+  LCK+ K+ EA      M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVG 626
            +G+ P  V+  TL   YC  G+   A  +  ++ +K     + + N +I +LC  KRV 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 627 MAALFFHKLLGKDQNVDRVSLAAL 650
            A     ++L K+   + V+ ++L
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSL 331



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 7/235 (2%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP I  +N I+  L K      A  L K+   + ++ D  T  IL++      +   +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++K G  P+     TL+   C + ++K+S  F  + +  G    + +Y +++ G  
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G   SA+K  + +      P+ + Y  +I GLCK   ++EA   Y  M  +GI P  +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 579 TRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           T  TL Y +C  G    A      +IL++++  ++  T+  L+  LC E +V  A
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI--LMDALCKEGKVKEA 239


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 234/452 (51%), Gaps = 8/452 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++++++ ++C+ G++ +  +    MLD G   D     +LI  +  KG    + +A  L 
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKG---RVDEANRLY 66

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           EEMV  G +P++YT+  L++  CK+   ++A  LF K +    ++P+V TY+ +ISG CK
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF-KTMAEKGFEPDVVTYSTIISGLCK 125

Query: 345 EEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
             K+  A EML  +M E+G   NT  Y +LI G CK  N ERAY L++ M  +G  P+  
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN I+ GLC+ G+V EA +       R    D + Y  LL    K+ +T +A+ LF  +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  G  PD   Y +++    R+  M E+E+ F++ + +G  P   TY+ ++ G+ R   +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A K  + M++IG  PD +TY  L+ GLCK + +D+A + + +M+  G +P  V+   +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 584 AYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
               CK      A ++ + + ++KL   + T N L+  LC   ++  A     ++     
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             D V+   L N   +  ++     L+Q + E
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 212/414 (51%), Gaps = 3/414 (0%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   V+   C+ G +    ++F++M   G+  D   Y +++  Y + GRV EA+R    M
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +  G      T   L+ AFC +     +K+A EL + M  KG++P+V T++ +I GLCK 
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKET---KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  +    +       N   Y A+I+G CK+E + RA  LLE M  +G +P+  T
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +++ G C++G    A    D M   G +P++ AYN ++D L K+G+  EA +L K   
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    D +TY  +L    +++   +A  +F +MV +G  P+   Y+ +++  CR KK+ 
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++ K  +E    G  P   TY  ++ G  +   +  A + F  M   GCAPD ++Y  ++
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +GLCK +K+ +A   ++ MI + + P  VT   L    CK G    A  +L+ +
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 211/420 (50%), Gaps = 6/420 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A+ GR+ E   +  EM + GL     T N ++   C+   ++ A E+F  M  +G
Sbjct: 49  LIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG 108

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
              D  +Y  ++   C+ G+VTEA +     M++RG   +      LI   C      +I
Sbjct: 109 FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE---NI 165

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A++LLEEM  KG+ P+  T+  ++ GLC+ G   +A + F   + S  Y P+V  Y  
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA-KQFFDSMPSRGYSPDVVAYNG 224

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++    KE K + A  L + +  +G +P+T TY S++ G  +  N + A ++   M   G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN   Y+ ++ G C+  +V +A+++L++  +     D +TY ILL    K     +A 
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  MV  G  PDI +Y+ ++   C+  K+ ++   F   I   L P   T+  ++ G 
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG-ISPC 576
            + G +  A     +M   GCAPD + Y  L++GL KQ +  +A +  ++M  KG +S C
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 197/412 (47%), Gaps = 40/412 (9%)

Query: 294 PNVYTH-----------------------------------TVLIDGLCKKGWTEKAFRL 318
           PN YT                                     +LIDG  KKG  ++A RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++V S   +P+++TY ++++ +CKE KM  A  L + M E+G  P+  TY+++I G C
Sbjct: 66  YEEMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 379 KVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           K G    A +++   M + GC+ N  AYNA+I+GLCK   ++ AY+LL++   +    D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY  +LS   +  +  +A   F  M   G +PD+ AY  L+ A  ++ K  E+ K F++
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I  G  P   TY S++ G  R  N+  A + F++M   GCAP+  TY  ++SG C+  K
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNT 614
           +D+A +  E M   G  P  VT   L    CK      A  +  ++        I + + 
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           ++  LC   +V  A + F +++ +    D V+   L +   ++ K     DL
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 131/253 (51%), Gaps = 4/253 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+PN Y +  ++   CK+G++++ Y+L ++     +  D I Y IL+  + K+    +A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  MV  GL P I+ Y +L+ AFC++ KMKE+ + F+     G  P   TY+++I G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 518 LRDGNISSAVK-YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            + G ++ A++  F +M + GC+ + + Y ALI+GLCK   ++ A +  E M  KG  P 
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFH 633
            +T  T+    C+ G  + A    +S+  + +   V   N L+  L  E +   A   F 
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 634 KLLGKDQNVDRVS 646
            ++ K    D V+
Sbjct: 244 DVIAKGYMPDTVT 256



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 11/251 (4%)

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           RE   ++ T+ ++L    KQ + +    LF +M+  G++PD   Y  LI  + ++ ++ E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + + ++E ++ GL P+  TY S++  + ++  +  A++ F+ M + G  PD +TY  +IS
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 551 GLCKQSKLDEACQ-FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           GLCK  K+ EA +  +  MI +G S   V    L    CK  +   A  +LE +  K ++
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 610 R---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YAL 662
               T NT++  LC   +V  A  FF  +  +  + D V+   L +A Y+  K      L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 663 FSDLSQRIAEG 673
           F D+   IA+G
Sbjct: 242 FKDV---IAKG 249


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 228/460 (49%), Gaps = 43/460 (9%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG- 272
           M  R V  D  +Y +++   C+  +  +A   L  M+DRG   D  T   ++   C  G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 273 --------------------------FRGSIKQ-----AFELLEEMVRKGWKPNVYTHTV 301
                                       G  KQ     A  L++E V  G+ P+V T+++
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L DGLCK+G  ++AF L +K +  +   PN+ TY  +I G CK  K  +A  LLE +   
Sbjct: 121 LADGLCKRGRIDEAFEL-VKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G +P+  TYT ++ G CK G  ++A  +++ M K GCTP++  Y A+++GLC+ GRV EA
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL--NPDIHAYTTLI 479
           + + K+   ++  AD + Y  L++ + K + TK+A     + V  G+   P I  Y  L+
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALM 294

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +C++ ++ E    F++    G  P  +TY  ++ G  + G +  A  + + M+  GC 
Sbjct: 295 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV 354

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD ++Y  +I GL K SK  EA Q  + MI  GI P  VT  TL  ++CK+     A+ I
Sbjct: 355 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 414

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           L+++ K        T NTLI  L    R+G A    H++L
Sbjct: 415 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 262/551 (47%), Gaps = 38/551 (6%)

Query: 143 LISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           L   G FERAH ++  M               +S   +   +    ++V E  ++G    
Sbjct: 55  LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPD 114

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T + +    C+ G ++ A E+  EM   G   +  +Y  ++   C+  +  +A   L 
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ++  G + D  T T+++   C +   G + +A +++E M+++G  P+V T+T L++GLC
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKE---GRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 231

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  ++A  +F ++V  D    +   Y ++++GYCK  +   A+ +++ ++     P  
Sbjct: 232 RTGRVDEAHHIFKEMVSKD-CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYI 287

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           + Y +L+ G+CK G  +   ++ + M   GC PNI  YN ++DGLCK G+V EA+  L+ 
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D ++Y I++    K ++ K+A  +  +M++AG+ PD   Y TL+A FC++++
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN-ITYG 546
             ++    +  I AG+ P   TY ++I G  +   +  A +    M + GC      TY 
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +I  LCK+  L +A    + M G G+    VT        CK+G    A  +L  +D  
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
               +  T+I  LC  +++  A+    +++            A+K  C  S+ + L  D 
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMV------------AVKGLCITSHTFNLLIDA 575

Query: 667 ---SQRIAEGI 674
              ++R+ E +
Sbjct: 576 FTKTKRLDEAL 586



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 237/503 (47%), Gaps = 56/503 (11%)

Query: 150 ERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV 194
           E+A+E+++ +VSS                 + GRL +   MV  M   G      T   +
Sbjct: 167 EKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 226

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-------- 246
           +   C  G V+ A  +F EM ++   ADA +Y  +V  YC+  R  EA + +        
Sbjct: 227 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 286

Query: 247 ----SAMLD--------------------RGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
               +A++D                    RG + +  T  +++   C     G + +AF 
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAFP 343

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
            LE M   G  P+V ++ ++IDGL K    ++A ++  +++++    P+  TY  +++ +
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQF 402

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN- 401
           CKEE+ + A  +L+ M + G+ P+  TY +LI G  +      AY+LM  M + GC  + 
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YN IID LCK+G +++A  L+       ++A+ +TY I +    K+    +A  L  
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-GLFPTKETYTSMICGYLRD 520
            M       D  +YTT+I   C+ +++  + K  +E +   GL  T  T+  +I  + + 
Sbjct: 523 EMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 579

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  A+   + M Q GC+P  ITY  +I+ LCK  K+D+A + ++ M  +GI    V+ 
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639

Query: 581 VTLAYEYCKQGDSATAMIILESL 603
             L Y  C QG    A+ +LE +
Sbjct: 640 TVLIYGLCGQGRGKEALQVLEEM 662



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 9/344 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  + KE   ++ +M   G+P    T N ++   C+    + A  +   M   G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSI 277
           V  D  +Y  ++    +  R+ +A   +  ML  G ++    T   +I   C +G    +
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG---CL 479

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           KQA  L++ M   G + N  T+ + ID LCK+G  ++A  L  ++   D  +  V +YT 
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEV-SYTT 535

Query: 338 MISGYCKEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +I G CK E+++RA  L   M   +GL   ++T+  LI    K    + A  L++LM + 
Sbjct: 536 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQR 595

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC+P++  YN +I  LCK  +V +A+EL  +   R + A  ++YT+L+     Q   K+A
Sbjct: 596 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 655

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           L +   M  +    D      L  A   Q + +E+ +  +   T
Sbjct: 656 LQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTT 699



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 8/217 (3%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG    A      ++    + G LK+   ++  MT +G+   T T N  +   C+ G
Sbjct: 453 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD-RGAILDNATL 261
            ++ A  +  EM       D  SY  +++  C+  ++  A +    M+  +G  + + T 
Sbjct: 513 RLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTF 569

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            LLI AF  K  R  + +A  LLE MV++G  P+V T+ ++I  LCK    +KA+ LF +
Sbjct: 570 NLLIDAF-TKTKR--LDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 626

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +        +V +YT +I G C + +   A  +LE M
Sbjct: 627 MAVRGIVASSV-SYTVLIYGLCGQGRGKEALQVLEEM 662


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 248/507 (48%), Gaps = 9/507 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR- 217
           ++    +  R+KE + +  E    G      T N ++   C+ G +E A  ++D+M    
Sbjct: 36  LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G      +Y  ++   CR   V +  + L  M  RG   +  T   L+ A   +G     
Sbjct: 96  GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG---RS 152

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN-YKPNVHTYT 336
           K+AF LLE+M   G  P + T  ++I GLCK+G  E AFR+  ++   ++   P+V T+ 
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +++ G CKE+++  A  + +R  E+G  PN  TY++LI G  K+   + A  L+  M + 
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC  N   Y+ ++DGL K GR+++A  +L++        D +TY  L+    K+   ++A
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +GL   M++AG +P +  YTTL    CR  +  E+ +        G  P   TY+S++ G
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 392

Query: 517 YLRDGNISSAVKYFQRMNQIGC-APDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             + G ++ A+ YF++M +    AP  I Y ALI GLCK  K+DEA +F E MI  G  P
Sbjct: 393 LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFF 632
             VT   L    C  G   T + +   + ++  +    T  TL+ +LC   RV  A   F
Sbjct: 453 DVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLF 512

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK 659
            ++     + DR +   + +   E N+
Sbjct: 513 QQMRSDGLSPDRSTRRTMIHGLLEVNR 539



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 204/412 (49%), Gaps = 8/412 (1%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           M+   C+  +V +A      M+D+    D  T   LI      G +  +K+A++L EE  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGL---GKQRRVKEAYDLFEEAR 57

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            KG  P V T+  +IDGLCK G  E A  L+  +     ++P V TY+ +I G C++ ++
Sbjct: 58  AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEV 117

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           ++   LLE M  +G  PN  TY +L+      G  + A+ L++ M   GC P +  +  I
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 409 IDGLCKKGRVQEAYELLKKAFQRE--LQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           I GLCK+G ++ A+ ++ + F  E  L  D IT+  +L    K+     A  +F R ++ 
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P++  Y+TLI    +  KM E+ +   + +  G      TY++++ G L+ G +  A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           V   ++M   GC PD +TY  LI G  K+ +L EA      M+  G  P  VT  TL + 
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
            C+ G    A+ IL+ +  +       T ++++  LC   RV  A  +F K+
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 239/530 (45%), Gaps = 51/530 (9%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVM- 156
           ++AIT+   + ++A     +++     G  K R     Y      L      +  H  + 
Sbjct: 12  DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY-----DLFEEARAKGCHPTVV 66

Query: 157 --QCMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
               M+    + GR++   ++  +M  + G      T + ++   C    V+   ++ +E
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  RG   +A +Y  +V A    GR  EA   L  M   G   +  T  L+I   C +  
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKE-- 184

Query: 274 RGSIKQAFELLEE--MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
            G I+ AF +++E  M+  G  P+V T   ++DGLCK+     A  +F + +     +PN
Sbjct: 185 -GEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER-GCRPN 242

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY+ +I G  K  KM+ A  LL +M E G   NT TY++++ G  KVG  E A  ++ 
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302

Query: 392 LMGKEGCTPNIYAYNAIID-----------------------------------GLCKKG 416
            M   GC P+   YN +ID                                   GLC+ G
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAY 475
           R  EA E+L     R    + ITY+ ++    K     +ALG F +M +   + P + AY
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           + LI   C+  K+ E+ +F +  I AG  P   T++ +I G    G I + ++ F+ M +
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
            GC PD +TY  L+  LC+ S++DEA   ++ M   G+SP   TR T+ +
Sbjct: 483 RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIH 532



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 201/406 (49%), Gaps = 7/406 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM--CA 216
           +V++    GR KE FS++ +M  NG P    T   ++   C+ G +E A  V DEM    
Sbjct: 142 LVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIE 201

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  D  ++  ++   C+  R+ +A       L+RG   +  T + LI           
Sbjct: 202 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA---K 258

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A +LL +MV  G + N  T++ ++DGL K G  E A  + L+ +R     P+  TY 
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV-VVLRQMRDAGCLPDAVTYN 317

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+ K +++  A  LL  M E G  P+  TYT+L +G C+ G F+ A +++D M   
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK-ITYTILLSEHLKQAETKQ 455
           GC PN   Y++I+DGLCK GRV EA    +K  + E+ A   I Y+ L+    K  +  +
Sbjct: 378 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDE 437

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A     RM++AG  PD+  ++ LI   C   ++    + F+     G  P   TY +++ 
Sbjct: 438 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
              R   +  A   FQ+M   G +PD  T   +I GL + ++ ++A
Sbjct: 498 RLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 151/295 (51%), Gaps = 5/295 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++  +M   G  A+  +Y  +V    ++GR+ +A   L  M D G + D  T   
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  F     R  +++A  LL EM+  G+ P+V T+T L  GLC+ G  ++A  + L  +
Sbjct: 319 LIDGFFK---RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI-LDYM 374

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM-KEQGLLPNTNTYTSLIYGHCKVGN 382
            +    PN  TY++++ G CK  ++  A    E+M +++ + P+   Y++LI G CK G 
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + AY+ ++ M + G  P++  ++ +I+GLC  GR+    EL +   +R    D +TY  
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           L+    + +   +A  LF +M   GL+PD     T+I       + +++++   E
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 219/416 (52%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +  S  ++GR+ E   ++++M   G      + + V+   C++G ++   ++ +EM  +G
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG 318

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +++  C+ G+V EA+R L  M+  G   D    T LI  FC     G++ 
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK---LGNVS 375

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ L +EM ++   P+  T+T +I GLC+ G   +A +LF ++V     +P+  TYTA+
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTAL 434

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCKE KM  A  L  +M + GL PN  TYT+L  G CK G  + A +L+  M ++G 
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             NIY YN++++GLCK G + +A +L+K         D +TYT L+  + K  E  +A  
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+   L P +  +  L+  FC    +++ EK  +  +  G+ P   TY S+I  Y 
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              N+ +  + ++ M   G  PD  TY  LI G CK   + EA   +  M+GKG +
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 670



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 256/557 (45%), Gaps = 43/557 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDE 213
           V         E G L E   +  +M N GL +   + N  +  ++ +L  ++ A +VF E
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
               GVC + +SY ++  + C++GRV EA + L  M  RG I D  + + +I  +C  G 
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVG- 302

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTH---------------------------------- 299
              +++  +L+EEM  KG KPN YT+                                  
Sbjct: 303 --ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 300 -TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            T LIDG CK G    A+RLF ++ +     P+  TYTA+I G C+  ++  A+ L   M
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             + L P+  TYT+LI G+CK G  + A+ L + M + G TPNI  Y A+ DGLCK G V
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A ELL +  ++ L+ +  TY  L++   K     QA+ L   M  AG +PD   YTTL
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           + A+C+ ++M  + +  ++ +   L PT  T+  ++ G+   G +    K  + M + G 
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+  TY +LI   C ++ +    + Y  M  KG+ P   T   L   +CK  +   A  
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659

Query: 599 ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           +   +  K   L + + N LI+     K+   A   F ++  +    DR       +  Y
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINY 719

Query: 656 ESNKYALFSDLSQRIAE 672
           +  K  L  +L     E
Sbjct: 720 DEGKMELTLELCDEAIE 736



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 4/319 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G++KE FS+  +M   GL     T   +    C+ G V+ A E+  EMC +G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +V   C+ G + +A + +  M   G   D  T T L+ A+C       + 
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR---EMV 550

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL +M+ +  +P V T  VL++G C  G  E   +L LK +      PN  TY ++
Sbjct: 551 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL-LKWMLEKGIMPNATTYNSL 609

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC    M     +   M  +G++P+ NTY  LI GHCK  N + A+ L   M  +G 
Sbjct: 610 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              + +YNA+I G  K+ +  EA EL ++  +  L AD+  Y I    +  + + +  L 
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 729

Query: 459 LFCRMVKAGLNPDIHAYTT 477
           L    ++  L  DI    T
Sbjct: 730 LCDEAIEKCLVGDIQTKNT 748


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 11/452 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + GV  +  +  +++ ++C + RV  A   L+ +L  G   D  T T LI   C   
Sbjct: 81  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC--- 137

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A  L ++M+ +G++PNV T+  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 138 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL-LRSMEQGNCQPDV 196

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             YT++I   CK+ ++  A  L  +M  QG+ P+  TYTSL++  C +  ++    L++ 
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      P++  ++ ++D LCK+G+V EA+E++    QR ++ D +TYT L+  H  Q+E
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ +F  MV+ G  PD+ +YTTLI  +C+  K+ ++   F+E       P  +TY +
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G    G +  A+  F  M   G  PD +TY  L+  LCK   L+EA    +++    
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEKRVGM 627
           ++P       +    C+ G+   A  +  +L  K     +W  T N +I  LC    +  
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVW--TYNIMIHGLCKRGLLNE 494

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           A   F ++ G D + D  +   +     ++N+
Sbjct: 495 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 258/569 (45%), Gaps = 12/569 (2%)

Query: 48  FSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASL 107
           F S+S +    +SL        L S+ +  H+   P  ++    + S+   +  + V SL
Sbjct: 19  FFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSL 78

Query: 108 ANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMVSSFAE 165
           + +  S  V  + +   I    F H  R+ +     + I     +        ++     
Sbjct: 79  STQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCV 138

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
            G++ E   +  +M + G      T   ++   C++G    A  +   M       D   
Sbjct: 139 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++ + C+  +VTEA    S M+ +G   D  T T L+ A C+       K    LL 
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN---LCEWKHVTTLLN 255

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +MV     P+V   + ++D LCK+G   +A  +   +++    +P+V TYT ++ G+C +
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQ 314

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +M+ A  + + M  +G  P+  +YT+LI G+CK+   ++A  L + M ++   P+   Y
Sbjct: 315 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 374

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ GLC  GR+Q+A  L  +   R    D +TY+ILL    K    ++A+ L   +  
Sbjct: 375 NTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEA 434

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           + LNPDI  Y  +I   CR  +++ +   F    + GL P+  TY  MI G  + G ++ 
Sbjct: 435 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 494

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A K F  M+   C+PD  TY  +  G  + ++   A Q  E M+ +G S  +V+  TL  
Sbjct: 495 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS-ADVSTTTLLV 553

Query: 586 EYCKQG--DSATAMIILESL---DKKLWI 609
           E       D ++  ++L  L   D++ +I
Sbjct: 554 EMLSDDGLDQSSCFLMLSVLSEDDRRYFI 582



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  PNVYT  +LI+  C       AF +  K+++   ++P+  T+T +I
Sbjct: 75  VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL-GHQPDPTTFTTLI 133

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++M ++G  PN  TY +LI G CKVGN   A  L+  M +  C 
Sbjct: 134 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 193

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V EA+ L  +   + +  D  TYT L+       E K    L
Sbjct: 194 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 253

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +MV + + PD+  ++T++ A C++ K+ E+ +     I  G+ P   TYT+++ G+  
Sbjct: 254 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 313

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M + G APD I+Y  LI+G CK  K+D+A   +E M           
Sbjct: 314 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC---------- 363

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLL 636
                                    +K WI   +T NTL+  LC   R+  A   FH+++
Sbjct: 364 -------------------------RKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398

Query: 637 GKDQNVDRVSLAALKNA 653
            + Q  D V+ + L ++
Sbjct: 399 ARGQMPDLVTYSILLDS 415


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 237/450 (52%), Gaps = 13/450 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++ F + G +     ++ EM T +G+     T   VV   C  G ++ A E+  EM  +
Sbjct: 51  VINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 110

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  D  ++  ++  +C   +V EA +    +L     LD  + + LIT  C +     I
Sbjct: 111 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRER---RI 167

Query: 278 KQAFELLEEMVRK---GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            +A+EL +EM  +    WKP+V T+T LIDG CK G  EKA ++ L ++      PNV T
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM-LGVMEGRKCVPNVVT 226

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y++++ G CK   +++A  L  RM  +G +PN  TYT+LI+G C     + A  LMD M 
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
              C  +  +YNA++DG C+ GR++EA +L K+   +    D+ITYT L+      +  +
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346

Query: 455 QALGLFCRM-VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +A  L   M   AG++PD+  Y+ ++A + R K+  E+ +F QE I   + P   TY+S+
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  + G ++ A++  + +++    PD +TY  +I GLC   + +EA    E M+ K +
Sbjct: 407 IDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            P   T  ++    C+ GD   A  +L ++
Sbjct: 463 EPSVGTFNSVIGALCRLGDMDEAWKLLVAM 492



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 78/436 (17%)

Query: 279 QAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A+E+L+EM   K   P++ T++ +I+G CK+G  ++A  +  ++V  D   P+V TYT+
Sbjct: 27  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTS 86

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-------- 389
           ++ G C++ KM+RA  ++  MK +G+ P+  T+++LI G C     + A  L        
Sbjct: 87  VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 146

Query: 390 ------------------------------MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                                         M++       P++  Y A+IDG CK G ++
Sbjct: 147 CRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLE 206

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A ++L     R+   + +TY+ LL    K  +  QAL LF RM   G  P++  YTTLI
Sbjct: 207 KAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 266

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKE-TYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
              C   K+ ++ +   + +TA   P    +Y +++ GY R G I  A + F+ M    C
Sbjct: 267 HGLCAAHKV-DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSC 325

Query: 539 APDNITYGALISGLCKQSKLD------------------------------------EAC 562
            PD ITY  L+ G C  S+L+                                    EA 
Sbjct: 326 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 385

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           +F + MI + ++P  VT  +L    CK G    AM +L+++DK   + T   +I  LC  
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVV-TYTIVIEGLCGT 444

Query: 623 KRVGMAALFFHKLLGK 638
            R   A     +++ K
Sbjct: 445 DRTEEALTLLEEMVNK 460



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 229/532 (43%), Gaps = 71/532 (13%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y      L  +G  +RA E+++ M               ++ +    ++ E   +  E+ 
Sbjct: 84  YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 143

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA---DASSYKLMVVAYCRMG 237
            +   L   + + ++   C    +  A E+F EM  R   A   D  +Y  ++  +C+ G
Sbjct: 144 TSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSG 203

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +A + L  M  R  + +  T + L+   C  G    + QA +L   M  KG  PNV 
Sbjct: 204 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG---DLDQALDLFRRMTSKGCVPNVV 260

Query: 298 THTVLI-----------------------------------DGLCKKGWTEKAFRLFLKL 322
           T+T LI                                   DG C+ G  E+A +LF K 
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF-KE 319

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK-EQGLLPNTNTYTSLIYGHCKVG 381
           + + +  P+  TYT ++ G+C   ++  A  LLE MK   G+ P+  TY+ ++ G+ +  
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 379

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
            F  A + +  M      PN   Y+++IDGLCK GRV  A E+LK   +     D +TYT
Sbjct: 380 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYT 435

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           I++        T++AL L   MV   + P +  + ++I A CR   M E+ K        
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ--------IGCAPDNITYGALISGLC 553
           GL P   TYT+++ G+ R G +  A + F+ M +            P+   + ALI GLC
Sbjct: 496 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLC 554

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           K  ++D+A    E +  +   P E   + +     + G +  A  ++ S+ K
Sbjct: 555 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 606



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 7/355 (1%)

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +R+   PN  T+ V+++GLCK   T KA+ +  ++    +  P++ TY+ +I+G+CK+ +
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 348 MNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           M+RA E+L E +   G+ P+  TYTS++ G C+ G  +RA +++  M  +G  P+ + ++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM--- 463
           A+I G C   +V EA +L K+      + D ++ + L++   ++    +A  LF  M   
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                 PD+  YT LI  FC+   ++++ K           P   TY+S++ G  + G++
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+  F+RM   GC P+ +TY  LI GLC   K+D A    + M         V+   L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
              YC+ G    A  + + +  K  +    T   L+R  C+  R+  A      +
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 195/454 (42%), Gaps = 87/454 (19%)

Query: 137 IVCATSLIS----NGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +V  T+LI     +GN E+A +++  M               +    + G L +   +  
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 248

Query: 178 EMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            MT+ G +P + +    + G+ C    V+ A  + DEM A    AD  SY  ++  YCR+
Sbjct: 249 RMTSKGCVPNVVTYTTLIHGL-CAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK------------------------- 271
           GR+ EA +    M  +  + D  T T L+  FC+                          
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367

Query: 272 ------GFRGSIK--QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
                 G+  + +  +A E ++EM+ +   PN  T++ LIDGLCK G    A  +     
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL---- 423

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +  KP+V TYT +I G C  ++   A  LLE M  + + P+  T+ S+I   C++G+ 
Sbjct: 424 -KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A+ L+  M   G  P +  Y  +++G  + GR++ AYEL                   
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF------------------ 524

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
             E +++   K +         A L P+  A++ LI   C+ +++ ++    +E  +   
Sbjct: 525 --EVMRRKAKKSSSA-------ANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSREC 574

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            P +E   +++ G LR G    A K    ++++G
Sbjct: 575 EPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 8/252 (3%)

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ-RELQADKITYTILLSEHLKQAET 453
           +E   PN   YN +++GLCK     +AYE+LK+    + +  D +TY+ +++   KQ E 
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 454 KQALGLFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            +A  +   MV + G+ PD+  YT+++   CR  KM  + +  +E    G+ P K T+++
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK- 571
           +I G+     +  A+K ++ +    C  D ++  ALI+GLC++ ++ EA + ++ M  + 
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 572 --GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVG 626
                P  VT   L   +CK G+   AM +L  ++ +  +  V T   L+  LC    + 
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 627 MAALFFHKLLGK 638
            A   F ++  K
Sbjct: 242 QALDLFRRMTSK 253


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 230/445 (51%), Gaps = 11/445 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW-LSAMLDRGAILD 257
           CEL   + A E FD M  +GV     +   M+  + +  R  +A  W L A + R  I  
Sbjct: 132 CELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKA--WVLYAEMFRMRIKS 189

Query: 258 NA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +  T  ++I   C +G    +K+A E +  M   G KPNV T+  +I G C +G  E A 
Sbjct: 190 SVVTFNIMINVLCKEG---KLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA- 245

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           R+   L++    KP+ +TY + ISG CKE K+  A  +LE+MKE GL P   TY +LI G
Sbjct: 246 RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDG 305

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +C  GN E A+D  D M +EG  P +  YN +I  L    ++ EA  ++K+  ++ L  D
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPD 365

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY IL++ + +    K+A  L   M+  G+ P    YT+LI    ++ +MK+++  F+
Sbjct: 366 SVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFE 425

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + +  G+FP    + ++I G+  +GN+  A    + M+Q+   PD +T+  L+ G C++ 
Sbjct: 426 KIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREG 485

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVN 613
           K++ A +  E M  +GI P  ++  TL   Y K+GD   A  + +   S+     + T N
Sbjct: 486 KVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYN 545

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGK 638
            LI+ LC  +    A     +++ K
Sbjct: 546 ALIQGLCKNEEGDHAEQLLKEMISK 570



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 221/425 (52%), Gaps = 4/425 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S F +  R ++ + +  EM    +     T N ++ + C+ G ++ A+E    M A G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  YC  GRV  A      M  RG   D+ T    I+  C +G    ++
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEG---KLE 278

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +LE+M   G +P   T+  LIDG C KG  E AF    K+VR +   P V TY  +
Sbjct: 279 EASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVR-EGLMPTVSTYNML 337

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I     + KM+ A+ +++ M E+GL+P++ TY  LI G+C+ GN ++A+ L D M  +G 
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI 397

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    Y ++I  L K+GR+++A +L +K  ++ +  D I +  L+  H       +A  
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFA 457

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M +  + PD   + TL+   CR+ K++ + +  +E  + G+ P   +Y ++I GY 
Sbjct: 458 MLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYS 517

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G++  A +    M  IG  P  +TY ALI GLCK  + D A Q  + MI KGI+P + 
Sbjct: 518 KRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDN 577

Query: 579 TRVTL 583
           T ++L
Sbjct: 578 TYLSL 582



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 203/397 (51%), Gaps = 10/397 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+LK+    +  M   G+     T N ++   C  G VE A  +FD M  RG
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y   +   C+ G++ EA   L  M + G      T   LI  +C+KG   +++
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG---NLE 313

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGL---CKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            AF+  ++MVR+G  P V T+ +LI  L   CK    +      +K +      P+  TY
Sbjct: 314 MAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADG----IIKEMSEKGLVPDSVTY 369

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+GYC+   + +A  L + M  +G+ P   TYTSLIY   K G  ++A DL + + +
Sbjct: 370 NILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P++  +NA+IDG C  G +  A+ +LK+  Q ++  D++T+  L+    ++ + + 
Sbjct: 430 KGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEA 489

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L   M   G+ PD  +Y TLI+ + ++  MK++ +   E ++ G  PT  TY ++I 
Sbjct: 490 ARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQ 549

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           G  ++     A +  + M   G  P++ TY +LI G+
Sbjct: 550 GLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 194/391 (49%), Gaps = 7/391 (1%)

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           LLI A C+   RG    AFE  + M  KG  P+V+    ++    K   TEKA+ L+ ++
Sbjct: 126 LLIRACCELK-RGD--DAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            R    K +V T+  MI+  CKE K+ +A+  +  M+  G+ PN  TY ++I+G+C  G 
Sbjct: 183 FRM-RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A  + DLM   G  P+ Y Y + I G+CK+G+++EA  +L+K  +  L+   +TY  
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  +  +   + A     +MV+ GL P +  Y  LI A     KM E++   +E    G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P   TY  +I GY R GN+  A      M   G  P  +TY +LI  L K+ ++ +A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
             +E ++ KGI P  +    L   +C  G+   A  +L+ +D+   +    T NTL++  
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           C E +V  A     ++  +    D +S   L
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTL 512



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 9/342 (2%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I   C+ ++ + A    + MK +G++P+ +    ++    K    E+A+ L   M 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +     ++  +N +I+ LCK+G++++A E +       ++ + +TY  ++  +  +   +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F  M   G+ PD + Y + I+  C++ K++E+    ++    GL PT  TY ++I
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   GN+  A  Y  +M + G  P   TY  LI  L    K+DEA    + M  KG+ 
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAAL 630
           P  VT   L   YC+ G+   A  + + +  K  I+    T  +LI  L    R+  A  
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISK-GIQPTRVTYTSLIYVLSKRGRMKQADD 422

Query: 631 FFHKLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQ 668
            F K++ K    D +   AL +  C   N    +A+  ++ Q
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 13/241 (5%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           + Y +L+    +      A   F  M   G+ P +HA   +++ F +  + +++   + E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
                +  +  T+  MI    ++G +  A ++   M  +G  P+ +TY  +I G C + +
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVN 613
           ++ A   ++ M  +G+ P   T  +     CK+G    A  +LE + K++ +R    T N
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM-KEIGLRPTAVTYN 300

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
           TLI   C++  + MA  +  K++ ++  +  VS        Y    +ALF D     A+G
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMV-REGLMPTVS-------TYNMLIHALFLDCKMDEADG 352

Query: 674 I 674
           I
Sbjct: 353 I 353


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 222/394 (56%), Gaps = 4/394 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C +G ++     F EM   G   +  +Y  ++ AYC+MGR+ EA   L +M
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +G   +  +  ++I   C +   GS+K+A+E+LEEM  KG+ P+  T+  L++G CK+
Sbjct: 276 SSKGMQPNLISYNVIINGLCRE---GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 332

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  +  ++VR +   P+V TYTA+I+  CK   +NRA    ++M+ +GL PN  T
Sbjct: 333 GNFHQALVIHAEMVR-NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+LI G  + G    AY +++ M + G +P++  YNA I G C   R++EA  ++++  
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D ++Y+ ++S   ++ E  +A  +   MV+ G++PD   Y++LI   C  +++ 
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    QE +  GL P + TYT++I  Y  +G+++ A+     M   G  PD +TY  LI
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           +GL KQ++  EA +    +I +   P +VT  TL
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 234/483 (48%), Gaps = 24/483 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F  +G L++G     EM  NG LP +  T N ++   C++G ++ A  +   M ++
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVV-TYNTLIDAYCKMGRIDEAFGLLKSMSSK 278

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  SY +++   CR G + EA   L  M  +G   D  T   L+  +C +   G+ 
Sbjct: 279 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE---GNF 335

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA  +  EMVR G  P+V T+T LI+ +CK     +A   F ++ R    +PN  TYT 
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTT 394

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+ ++  +N A  +L  M E G  P+  TY + I+GHC +   E A  ++  M ++G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++ +Y+ II G C+KG +  A+++ ++  ++ +  D +TY+ L+    +     +A 
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+  GL PD   YTTLI A+C +  + ++     E I  G  P   TY+ +I G 
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEAC 562
            +      A +   ++      P ++TY                ALI G C +  + EA 
Sbjct: 575 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 634

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
           + +ESM+ +   P E     + + +C+ G+   A  + + +    ++    TV TLI+ L
Sbjct: 635 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694

Query: 620 CSE 622
             E
Sbjct: 695 FKE 697



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 203/398 (51%), Gaps = 7/398 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +LI  FC  G    +++      EM R G  PNV T+  LID  CK G  ++AF L 
Sbjct: 216 TYNILIRGFCSVG---ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL- 271

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           LK + S   +PN+ +Y  +I+G C+E  M  A  +LE M  +G  P+  TY +L+ G+CK
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            GNF +A  +   M + G +P++  Y A+I+ +CK   +  A E   +   R L+ ++ T
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           YT L+    +Q    +A  +   M ++G +P +  Y   I   C  ++M+E+    QE +
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   +Y+++I G+ R G +  A +  Q M + G +PD +TY +LI GLC+  +L 
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
           EAC   + M+  G+ P E T  TL   YC +GD   A+ + + +  K ++    T + LI
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             L  + R   A     KL+ ++     V+   L   C
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 208/388 (53%), Gaps = 7/388 (1%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK--AFRLFLKLVRSDNYKPNVHT 334
           I QA   +      G+ P V ++  ++D + +   + K  A  ++ +++RS    PNV+T
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRS-RVSPNVYT 216

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G+C   ++ +       M+  G LPN  TY +LI  +CK+G  + A+ L+  M 
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 276

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  PN+ +YN II+GLC++G ++EA+E+L++   +    D++TY  LL+ + K+    
Sbjct: 277 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 336

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           QAL +   MV+ G++P +  YT LI + C+ + +  + +FF +    GL P + TYT++I
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 396

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ R G ++ A +    M + G +P  +TY A I G C   +++EA    + M+ KG++
Sbjct: 397 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 456

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  V+  T+   +C++G+   A  + + + +K       T ++LI+ LC  +R+  A   
Sbjct: 457 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESN 658
             ++L      D  +   L NA C E +
Sbjct: 517 SQEMLDMGLPPDEFTYTTLINAYCVEGD 544



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 221/476 (46%), Gaps = 58/476 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++GR+ E F ++  M++ G+     + N ++   C  G ++ A E+ +EM  +G
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  YC+ G   +A    + M+  G      T T LI + C      ++ 
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR---NLN 371

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E  ++M  +G +PN  T+T LIDG  ++G   +A+R+  ++  S  + P+V TY A 
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSVVTYNAF 430

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C  E+M  A  +++ M E+GL P+  +Y+++I G C+ G  +RA+ +   M ++G 
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P+   Y+++I GLC+  R+ EA +L ++     L  D+ TYT L++ +  + +  +AL 
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550

Query: 459 LFCRMVKAGLNPDIHAYTTLI--------------------------------------- 479
           L   M+  G  PD   Y+ LI                                       
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610

Query: 480 -----------AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                        FC +  M E+++ F+  +     P +  Y  +I G+ R GN+  A  
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            ++ M   G  P  +T   LI  L K+   +E  +    +IG  +  C +    LA
Sbjct: 671 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSE----VIGDTLRSCRLNEAELA 722



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 17/318 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R++E   +V EM   GL     + + ++   C  G ++ A ++  EM  +GV  DA +Y 
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C M R+TEA      MLD G   D  T T LI A+C     G + +A  L +EM
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC---VEGDLNKALHLHDEM 555

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV--------------H 333
           + KG+ P+  T++VLI+GL K+  T +A RL  KL+  ++   +V               
Sbjct: 556 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 615

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +  A+I G+C +  M+ A+ + E M E+   P    Y  +I+GHC+ GN  +A++L   M
Sbjct: 616 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  P+      +I  L K+G  +E  E++    +     +     +L+  + K+   
Sbjct: 676 IHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNM 735

Query: 454 KQALGLFCRMVKAGLNPD 471
           +  L +   M K GL P+
Sbjct: 736 EAVLNVLTDMAKDGLLPN 753



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 42/316 (13%)

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK-KGRVQEA------------ 421
           Y H  +   ++A + ++L    G  P + +YN+++D + + +G V+ +            
Sbjct: 152 YSHLNM--IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR 209

Query: 422 -------YELLKKAF--QRELQ---------------ADKITYTILLSEHLKQAETKQAL 457
                  Y +L + F    ELQ                + +TY  L+  + K     +A 
Sbjct: 210 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           GL   M   G+ P++ +Y  +I   CR+  MKE+ +  +E    G  P + TY +++ GY
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++GN   A+     M + G +P  +TY ALI+ +CK   L+ A +F++ M  +G+ P E
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            T  TL   + +QG    A  IL  + +  +   + T N  I   C  +R+  A     +
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449

Query: 635 LLGKDQNVDRVSLAAL 650
           ++ K    D VS + +
Sbjct: 450 MVEKGLAPDVVSYSTI 465



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 54/259 (20%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E+ RL E   +  EM + GLP    T   ++   C  G +  A  + DEM  +G
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT---------------LTL 263
              DA +Y +++    +  R  EA R L  ++   ++  + T               +  
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 619

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  FC KG    + +A  + E MV +  KP    + V+I G C+ G   KAF L+ +++
Sbjct: 620 LIKGFCMKGL---MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 676

Query: 324 RSDNYKPNVHTYTAMISGYCKEE----------------KMNRAEM-------------- 353
            S  + P+  T   +I    KE                 ++N AE+              
Sbjct: 677 HS-GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNM 735

Query: 354 -----LLERMKEQGLLPNT 367
                +L  M + GLLPN+
Sbjct: 736 EAVLNVLTDMAKDGLLPNS 754


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 232/484 (47%), Gaps = 41/484 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C  G +  A      M   G+  DA +Y  ++ A+CR G + EA   L+ M
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   L++A+   G+   IKQA +++E M   G++P+++T+ VL  GLC+ 
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGW---IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA 322

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAM------------------------------- 338
           G  ++AFRL  ++ R     P+V TY  +                               
Sbjct: 323 GKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382

Query: 339 ----ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
               I G CK+ ++  A   L +M + GL P+  TY +LI+ HCK GN  +AY LMD M 
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   + +  N ++  LCK+ R +EA  LL+   QR    D+++Y  +++ + K+  ++
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L+  M++  L P I  Y TLI    R  ++KE+     E +  GL P   TY  +I
Sbjct: 503 PALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIII 562

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y ++G++ +A ++  +M +    PD +T   L++GLC   KLD+A + +ES + KG  
Sbjct: 563 HAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKK 622

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALF 631
              +T  TL    CK GD  TA+     ++ +       T N ++  L    R   A   
Sbjct: 623 VDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNM 682

Query: 632 FHKL 635
            HKL
Sbjct: 683 LHKL 686



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 197/441 (44%), Gaps = 38/441 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L E  +++  M  +G+     T N +V     LG ++ A +V + M A G   D  +Y
Sbjct: 253 GMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTY 312

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            ++    C+ G+V EA R    M   G +L +      +   C K    S   A  LLEE
Sbjct: 313 NVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS--DALRLLEE 370

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG K  + TH ++I GLCK G  E A     K+   D   P+V TY  +I  +CK  
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMA-DDGLAPDVITYNTLIHAHCKAG 429

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM---------------- 390
            + +A  L++ M  +GL  +T T  +++Y  CK   +E A  L+                
Sbjct: 430 NIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYG 489

Query: 391 -------------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
                              D M ++  TP+I  YN +I GL + GR++EA + L +  ++
Sbjct: 490 TVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK 549

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  D  TY I++  + K+ + + A     +MV+    PD+    TL+   C   K+ ++
Sbjct: 550 GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKA 609

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            K F+  +  G      TY ++I    +DG++ +A+ +F  M   G  PD  TY  ++S 
Sbjct: 610 LKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669

Query: 552 LCKQSKLDEACQFYESMIGKG 572
           L +  + +EA      +   G
Sbjct: 670 LSEAGRTEEAQNMLHKLAESG 690



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 194/415 (46%), Gaps = 8/415 (1%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +   ++ EM   G+     T N V+   C+ G +E A    ++M   G+  D  +Y  ++
Sbjct: 363 DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            A+C+ G + +A   +  M+ RG  LD  TL  ++   C +      ++A  LL+   ++
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK---RYEEAQGLLQSPPQR 479

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+ P+  ++  ++    K+  +E A RL+ +++      P++ TY  +I G  +  ++  
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK-KLTPSISTYNTLIKGLSRMGRLKE 538

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   L  + E+GL+P+  TY  +I+ +CK G+ E A+   + M +    P++   N +++
Sbjct: 539 AIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  G++ +A +L +   ++  + D ITY  L+    K  +   AL  F  M   GL P
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP 658

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   Y  +++A     + +E++    +   +G     ++++S +          S     
Sbjct: 659 DAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL--SQSFSSPLLKPSSVDEAESGKDAK 716

Query: 531 QRMNQIGCAPDNIT--YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                +    D+ +  Y  L++GLC   +  EA    + M+ KG+S    T +TL
Sbjct: 717 TEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITL 771



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 79/472 (16%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           S + + +    +V     PN YT  +L+   C KG    A    L  ++     P+  TY
Sbjct: 184 SPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALST-LSTMQGFGLSPDAVTY 242

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +++ +C++  +  A  LL RMK+ G+ P   TY +L+  + ++G  ++A  +++ M  
Sbjct: 243 NTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTA 302

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAY--------------------------------- 422
            G  P+++ YN +  GLC+ G+V EA+                                 
Sbjct: 303 NGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS 362

Query: 423 ---ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
               LL++  ++ ++A  +T+ I++    K  E + ALG   +M   GL PD+  Y TLI
Sbjct: 363 DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422

Query: 480 AA-----------------------------------FCRQKKMKESEKFFQEAITAGLF 504
            A                                    C++K+ +E++   Q     G  
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P + +Y +++  Y ++ N   A++ +  M +    P   TY  LI GL +  +L EA   
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
              ++ KG+ P + T   + + YCK+GD   A      + +   K  + T NTL+  LC 
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESN---KYALFSDLSQR 669
             ++  A   F   + K + VD ++   L +  C + +       F+D+  R
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 171/363 (47%), Gaps = 8/363 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G + + ++++ EM   GL L T TLN V+   C+    E A+ +      RG
Sbjct: 421 LIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRG 480

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              D  SY  ++ AY +      A R    M+++      +T   LI     KG    G 
Sbjct: 481 FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLI-----KGLSRMGR 535

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A + L E++ KG  P+  T+ ++I   CK+G  E AF+   K+V  +++KP+V T  
Sbjct: 536 LKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE-NSFKPDVVTCN 594

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +++G C   K+++A  L E   E+G   +  TY +LI   CK G+ + A      M   
Sbjct: 595 TLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ + YN ++  L + GR +EA  +L K  +    +   +  +L    + +AE+ + 
Sbjct: 655 GLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKD 714

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
                  V+   +    AYT L+   C   + KE++    E +  G+     TY +++ G
Sbjct: 715 AKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEG 774

Query: 517 YLR 519
            ++
Sbjct: 775 LVK 777



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 6/316 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML--LERMKEQGLLPNTNTYTS 372
           A +L   L R    +P++    A++S   +    +    L     +    L PN  T+  
Sbjct: 150 AAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNL 209

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L++ HC  G    A   +  M   G +P+   YN +++  C+KG + EA  LL +  +  
Sbjct: 210 LVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +   + TY  L+S + +    KQA  +   M   G  PD+  Y  L A  C+  K+ E+ 
Sbjct: 270 VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329

Query: 493 KFFQEAITAG-LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +   E    G L P   TY ++     +    S A++  + M + G     +T+  +I G
Sbjct: 330 RLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKG 389

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
           LCK  +L+ A      M   G++P  +T  TL + +CK G+ A A  +++ + +   KL 
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 609 IRTVNTLIRKLCSEKR 624
             T+NT++  LC EKR
Sbjct: 450 TFTLNTVLYNLCKEKR 465



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 10/280 (3%)

Query: 400 PNIYAYNAIIDGLCKKGRV--QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           P++ A NA++  L +      Q + +  +      L  +  T+ +L+  H  +     AL
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
                M   GL+PD   Y TL+ A CR+  + E+          G+ PT+ TY +++  Y
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG-ISPC 576
            R G I  A K  + M   G  PD  TY  L +GLC+  K+DEA +  + M   G + P 
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFH 633
            VT  TLA    K   S+ A+ +LE + +   K  + T N +I+ LC +  +  A    +
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 634 KLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQR 669
           K+       D ++   L +A C   N    Y L  ++ +R
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 226/455 (49%), Gaps = 14/455 (3%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM +SF +    +E F+   +M   G P    T N ++  +C+ G++E A ++  +M   
Sbjct: 56  CMANSFDDA---RELFA---DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIED 109

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++   C+ GRV EA    + M   G   +  +   +I   C +     I
Sbjct: 110 GHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS---KI 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA ++  EM  +   P+ +++ +LIDGL K G   +A++LF +++ S    P+  TY  
Sbjct: 167 DQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS-GITPSAVTYNV 225

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G C    ++ A  L + M+ +G  P+  T+  LI  HCK G  + A+ L+  M  +G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  Y+ +I GLC   RV +A  LL+   +R+ +   +T   L+    K    K+A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV +G +PD+  Y TL+   CR  + + + +   + +  GL P   TYT+++ G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +  A   F +M   GCAP+  TY ALI G C   ++D   + +  M+  GISP  
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 578 VTRVTLAYEYCKQGDSATAMIIL----ESLDKKLW 608
           V   TLA E CK G SA A+ IL    ESL  + W
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 234/521 (44%), Gaps = 53/521 (10%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L+E   ++ +M  +G      T N V+   C+ G VE A  +F+EM   G   +  S+
Sbjct: 94  GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSH 153

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +++  C+  ++ +A +    M  R    D+ +  +LI      G    + +A++L   
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAG---KLNEAYKLFRR 210

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G  P+  T+ V+I G+C     ++A  LF K +RS   +P+  T+  +I  +CK  
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELF-KSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           KM+ A  LL+RM + G +P+  TY++LI G C +   + A  L++ M K  C P +   N
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GLCK GR++EA E+L          D +TY  L+  H +  +T++A  L   MV  
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL P++  YT L++  C+  ++ E+   F +  ++G  P   TYT++I G+   G +   
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQS------------------------------ 556
           +K F  M   G +PD++ YG L + LCK                                
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 509

Query: 557 -------KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
                  K++ A  F   M+  G  P      +L    CK G    A  +LE +    + 
Sbjct: 510 DGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY- 568

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                        K  G AA F  +++GK   ++   L  L
Sbjct: 569 -----------GGKARGKAAKFVEEMVGKGYEIEDGVLKPL 598



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 183/392 (46%), Gaps = 5/392 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +   P+ +++ +LIDGL K G    A  LF KL+ S    P+   YT++I G C   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHS-GVTPSTVAYTSLIHGLCMAN 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
             + A  L   M  +G  P+  TY  +I   CK G  E A DL+  M ++G  P++  YN
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++DGLCK GRV+EA  L  +  +     ++ ++  ++    +Q++  QA  +F  M   
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PD  +Y  LI    +  K+ E+ K F+  + +G+ P+  TY  +I G      +  A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ F+ M   GC P   T+  LI   CK+ K+DEA +  + M   G  P  VT  TL   
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 587 YCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C       A  +LE + K   K  + T NTLI  LC   R+  A      ++   Q+ D
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 644 RVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            V+   L +  C           LS  +A G+
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGL 391


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 251/525 (47%), Gaps = 11/525 (2%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL+FF W      FRH    +      L          +++  M+S       ++E    
Sbjct: 73  ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDA 132

Query: 176 VIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           +  +   G   L L     N  +       + E+  +++ ++   G+  D  +Y  M++A
Sbjct: 133 IQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMA 192

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC+ G +  A R+   + + G  +D  T   L+  +C     G +++A  LL  M   G 
Sbjct: 193 YCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRT---GDLRKACWLLMMMPLMGC 249

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           + N Y++T+LI GLC+     +A  L L +++ D   PN+HTYT +I G CKE +++ A 
Sbjct: 250 RRNEYSYTILIQGLCETRCVREALVLLLMMLQ-DGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           +LL+ M  +G++P+  TY ++I G+CK G  + A  +  LM   GC P+ + YN++I GL
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C  G+  EA ELL  A  R      IT+T +++ + K  +   AL +   M+ +    D+
Sbjct: 369 C-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            AY  LI+   ++ ++KE++    E    GL P    YTS+I  Y + G + +A++ F+ 
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
               GC P+  TY +LI GL +  KL +A      M   GI+P  +T  TL    CK+ +
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 593 SATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHK 634
              A  + E +++       +  N L   LC   R   A  F  K
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK 592



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 13/500 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E   ++E   +++ M  +G      T   ++   C+ G +  A  + DEM  RG
Sbjct: 259 LIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRG 318

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  M+  YC+ GR+ +A    + M   G   D+ T   LI   C     G   
Sbjct: 319 VVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG----GKPD 374

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL   + +G+ P V T T +I+G CK    + A R+   ++ S   K ++  Y  +
Sbjct: 375 EAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI-SSKCKLDLQAYGVL 433

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS   K+ ++  A+  L  +   GL PN   YTS+I  +CKVG    A ++  L   EGC
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y+++I GL +  ++ +A  L+ K  +  +    ITYT L+    K+ E   A  
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + GL PD  AY  L  A C+  + +E+  F    +  G+  TK TYTS++ G+ 
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFS 610

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN   A    ++M   GC  D+ TY  L+  LCKQ KL+EA    + M  +G+    V
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 579 TRVTLAYEYCKQG--DSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
               +  E  K+G  D A +M   ++ S  K   I T    I   C   R+  A     +
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAI-TYTVFISSYCKIGRIEEAGHLIGE 729

Query: 635 LLGKDQNVDRVSLAALKNAC 654
           +       D V+     N C
Sbjct: 730 MERNGVAPDVVTYNVFINGC 749



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 223/528 (42%), Gaps = 88/528 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + GRLK+   +   M  NG      T N ++   C  G  + AEE+ +   ARG
Sbjct: 329 MIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC+  ++ +A R  S M+     LD     +LI+    K     +K
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKH---RLK 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A + L E+   G  PNV  +T +ID  CK G                     WT     
Sbjct: 445 EAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   P V TYT +I G CK+ + + A  L E M++ GL
Sbjct: 505 YGLIQDQKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563

Query: 364 LPNTN--------------------------------TYTSLIYGHCKVGNFERAYDLMD 391
            P+                                  TYTSL+ G  K GN E A  L++
Sbjct: 564 TPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIE 623

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC  + + Y+ ++  LCK+ ++ EA  +L +   R ++ + + YTI++SE +K+ 
Sbjct: 624 KMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEG 683

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  +F  M+ +G  P    YT  I+++C+  +++E+     E    G+ P   TY 
Sbjct: 684 KHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYN 743

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----------------SGLCKQ 555
             I G    G +  A    +RM    C P+  TY  L+                SG+   
Sbjct: 744 VFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNW 803

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            KLD   Q  E M+  G++P  VT  ++   +CK      A ++L+ +
Sbjct: 804 IKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHM 851



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 189/410 (46%), Gaps = 23/410 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L +  +++ +M  +G+     T   ++   C+    + A  +F+ M   G+  D  +Y 
Sbjct: 512 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 571

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++  A C+ GR  EA    S ++ +G +L   T T L+  F   G   + + A  L+E+M
Sbjct: 572 VLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAG---NTEFAAALIEKM 625

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G K + +T++VL+  LCK+    +A  +  ++      K N+  YT +IS   KE K
Sbjct: 626 VNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLR-GVKGNIVAYTIIISEMIKEGK 684

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A+ +   M   G  P+  TYT  I  +CK+G  E A  L+  M + G  P++  YN 
Sbjct: 685 HDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNV 744

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA---------------- 451
            I+G    G +  A+  LK+      + +  TY +LL   LK +                
Sbjct: 745 FINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWI 804

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +      L  RMVK GLNP    Y+++IA FC+  +++E+       +   + P +E YT
Sbjct: 805 KLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 864

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            +I           A  +   M + G  P   +Y  LI+GLC +   D+A
Sbjct: 865 MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKA 914



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 20/340 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L E  S++ +MT  G+         ++    + G  ++A+ +F+EM + G    A +Y 
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYT 708

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC++GR+ EA   +  M   G   D  T  + I      G  G +  AF  L+ M
Sbjct: 709 VFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGC---GHMGYMDCAFSTLKRM 765

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG------------WT----EKAFRLFLKLVRSDNYKPN 331
           +    +PN +T+ +L+    K              W     +  ++L  ++V+     P 
Sbjct: 766 IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH-GLNPT 824

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY+++I+G+CK  ++  A +LL+ M  + + PN   YT LI   C +  FE+A   + 
Sbjct: 825 AVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVT 884

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P++ +Y+ +I GLC +G   +A  L     + +   +++ + IL    LK  
Sbjct: 885 NMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAG 944

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
                  L   M       D   Y+ +         M ES
Sbjct: 945 HVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYES 984



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 20/291 (6%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +SS+ +IGR++E   ++ EM  NG+     T N  +     +G ++ A      M     
Sbjct: 711 ISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASC 770

Query: 220 CADASSYKLMVVAYCRMG-----RVTEADRW-----------LSAMLDRGAILDNATLTL 263
             +  +Y L++  + +M       V  +  W           L  M+  G      T + 
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I  FC K  R  +++A  LL+ M+ K   PN   +T+LI   C     EKA      ++
Sbjct: 831 IIAGFC-KATR--LEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMI 887

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
               ++P++ +Y  +I+G C E   ++A+ L   + E     N   +  L  G  K G+ 
Sbjct: 888 EC-GFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           +    L+  M    C  +   Y+ + + + +   + E+Y       Q  +Q
Sbjct: 947 DICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESYMCAPLVGQNRMQ 997


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 248/479 (51%), Gaps = 9/479 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  E   ++ +M + G P    T N ++   C+ G +  A ++  +M  +G+  + +++ 
Sbjct: 212 RFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFN 271

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++VV  CR+G + EA   +  M     + D  T  ++I+ FC +G    I +A  L EEM
Sbjct: 272 ILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG---RIAEAMRLREEM 328

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                 P+V T+  LI+G  + G +E+ F+L ++ +     KPN  TY  M+  + K+ K
Sbjct: 329 ENLKLSPDVVTYNTLINGCFEHGSSEEGFKL-IEEMEGRGMKPNSVTYNVMVKWFVKKGK 387

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+  +  + +M+E G LP+  TY +LI  HCKVG  + A+ LMD MG++G   +    N 
Sbjct: 388 MDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNT 447

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++  LC++ ++ EA++LL  A +R    D+++Y  L+  + K  +  QAL L+  M +  
Sbjct: 448 MLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKE 507

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P I  Y ++IA  C+  K  ++     E + +GL P + TY ++I GY ++G +  A 
Sbjct: 508 IIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAF 567

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           ++  +M +    PD +T   L+ GLCK+  L++A + + + I KG     V+  T+    
Sbjct: 568 QFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSL 627

Query: 588 CKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQN 641
           CK+     A  +LE +++K       T N ++  L    R+  A  F  K+   GK +N
Sbjct: 628 CKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 236/472 (50%), Gaps = 7/472 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  ++ VF +    GV  + +S+ +++   C   R  EA R L  M D G   DN T   
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNT 237

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++   C K   G + +A +LL +M  KG  PN  T  +L+ G C+ GW ++A  + ++L+
Sbjct: 238 ILDGLCKK---GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANV-IELM 293

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             ++  P+  TY  MISG+CK+ ++  A  L E M+   L P+  TY +LI G  + G+ 
Sbjct: 294 SQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS 353

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E  + L++ M   G  PN   YN ++    KKG++ E  + ++K  +     D +TY  L
Sbjct: 354 EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL 413

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S H K  +  +A  L   M + GL  D     T++ A CR++K+ E+      A   G 
Sbjct: 414 ISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F  + +Y ++I GY +    S A++ +  M +    P  ITY ++I+GLC+  K ++A  
Sbjct: 474 FVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
             + ++  G+ P E+T  T+ + YC++G    A      + +K +   + T NTL+  LC
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            E  +  A   F+  + K ++VD VS   +  +  +  ++    DL + + E
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 204/409 (49%), Gaps = 4/409 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GRL E   ++++M N GL    +T N +V   C LG ++ A  V + M    V  DA +Y
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +M+  +C+ GR+ EA R    M +     D  T   LI    +    GS ++ F+L+EE
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFE---HGSSEEGFKLIEE 362

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G KPN  T+ V++    KKG  ++  +   K+  S    P++ TY  +IS +CK  
Sbjct: 363 MEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL-PDIVTYNTLISWHCKVG 421

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           KM+ A  L++ M  +GL  +  T  +++   C+    + A+DL+    + G   +  +Y 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I G  K  +  +A  L  +  ++E+    ITY  +++   +  +T QA+     ++++
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL PD   Y T+I  +C++ +++++ +F  + +     P   T  +++CG  ++G +  A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           +K F      G   D ++Y  +I  LCK+ +  EA    E M  K + P
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGP 650



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 206/422 (48%), Gaps = 27/422 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S F + GR+ E   +  EM N  L     T N ++    E G  E   ++ +EM  RG
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  ++ +Y +MV  + + G++ E D+ +  M + G + D  T   LI+  C     G + 
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK---VGKMD 424

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L++EM RKG K +  T   ++  LC++   ++A  L     R   +   V +Y  +
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV-SYGTL 483

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K EK ++A  L + MKE+ ++P+  TY S+I G C++G   +A D +D + + G 
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN II G C++G+V++A++   K  ++  + D +T   LL    K+   ++AL 
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF   +  G + D  +Y T+I + C++K+  E+    +E     L P   TY +++ G  
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663

Query: 519 RDGNISSAVKYFQRMNQIGCA-----------------------PDNITYGALISGLCKQ 555
             G +  A ++  ++ + G +                       P+ I Y   I+ LC Q
Sbjct: 664 DAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQ 723

Query: 556 SK 557
            +
Sbjct: 724 GR 725



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 10/322 (3%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG------WTEKAFRLFLKLVRSDNY 328
           G   QA ++   M R G +P + T   L++ L +         ++  F  F+K+      
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKI----GV 193

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           K N +++  +I G C E +   A  +L +M++ G  P+  TY +++ G CK G    A D
Sbjct: 194 KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARD 253

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M  +G  PN   +N ++ G C+ G ++EA  +++   Q  +  D  TY +++S   
Sbjct: 254 LLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           KQ    +A+ L   M    L+PD+  Y TLI         +E  K  +E    G+ P   
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY  M+  +++ G +    K  ++M + GC PD +TY  LIS  CK  K+DEA +  + M
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 569 IGKGISPCEVTRVTLAYEYCKQ 590
             KG+   +VT  T+    C++
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRE 455



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 144/320 (45%), Gaps = 62/320 (19%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC-ELGLVE------------ 205
           ++S   ++G++ E F ++ EM   GL +   TLN ++   C E  L E            
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472

Query: 206 -YAEEV---------------------FDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
            + +EV                     +DEM  + +     +Y  M+   C+MG+  +A 
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L  +L+ G + D  T   +I  +C +G    +++AF+   +MV K +KP+V T   L+
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEG---QVEKAFQFHNKMVEKNFKPDVVTCNTLL 589

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLCK+G  EKA +LF   + S     +  +Y  +I   CKE++   A  LLE M+E+ L
Sbjct: 590 CGLCKEGMLEKALKLFNTWI-SKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT-----------------------P 400
            P+  TY +++ G    G  + A + +  + ++G +                       P
Sbjct: 649 GPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHP 708

Query: 401 NIYAYNAIIDGLCKKGRVQE 420
           N  AY+  I+ LC +GR ++
Sbjct: 709 NAIAYSNKINELCSQGRYKD 728



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 142/345 (41%), Gaps = 28/345 (8%)

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-------MD 391
           I  Y    + ++A  +  RMK  G+ P   T  +L+    +   F  ++ +        D
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVR---FPSSHSIRLSKAVFTD 187

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            + K G   N  ++N +I G C + R  EA  +L K        D ITY  +L    K+ 
Sbjct: 188 FI-KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKG 246

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  L   M   GL P+   +  L+   CR   +KE+    +      + P   TY 
Sbjct: 247 RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYN 306

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G+ + G I+ A++  + M  +  +PD +TY  LI+G  +    +E  +  E M G+
Sbjct: 307 VMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW----------IRTVNTLIRKLCS 621
           G+ P  VT   +   + K+G        ++ +DK +           I T NTLI   C 
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGK-------MDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
             ++  A     ++  K   +D V+L  +  A     K     DL
Sbjct: 420 VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 263/556 (47%), Gaps = 32/556 (5%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTN---NGLPLIT-STLNRVVGIA 198
           L+  G F +AH+V   M     +IG   + ++  I M +    G P      LN + G  
Sbjct: 121 LVEYGYFSQAHKVYMRM----KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG 176

Query: 199 CELGLVEY---------------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           CE   V Y               A  +FDEM  +G+C D  ++  ++   C+ G V E++
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +  S ++ RG   +  T  + I   C KG   +I +A  LLE +V +G  P+V ++  LI
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCRKG---AIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            G CK     +A     K+V S   +PN  TY  +I+G+CK   M  A+ +L     +G 
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P+  TY+SLI G C  G+  RA  +     ++G   +I  YN ++ GL K+G V +A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+K   +     D  TY ++++   K      A G+    +  G  PDI  + TLI  +C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +Q+ M ++ +     ++ G+ P   TY +++ G  +   + + V  F+ M + GC P+ I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI   CK  K+ EA + ++ M  +G++P  VT  TL    C  G+   A  +  ++
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592

Query: 604 DKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
           +K+          N +I   C +  V MA   FHK+ G D   D  +   + ++ C   N
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652

Query: 659 KYALFSDLSQRIAEGI 674
                + L + I++G+
Sbjct: 653 IDLAHTFLLENISKGL 668



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 250/562 (44%), Gaps = 86/562 (15%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV-VGIACELGL---V 204
           F+   E  +CM+      G+ +    ++ EM  N   + +  L  V +GI  + G    V
Sbjct: 36  FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN---VDSKMLEGVYIGIMRDYGRKGKV 92

Query: 205 EYAEEVFDEM----CAR-------------------------------GVCADASSYKLM 229
           + A  VF+ M    C                                 G+  D  ++ + 
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 230 VVAYCRMGRVTEADRWLS-----------------------------------AMLDRGA 254
           + ++C  GR T A R L+                                    ML +G 
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D  T   LI   C K   G+++++ +L  +++++G  PN++T  + I GLC+KG  ++
Sbjct: 213 CPDILTFNKLIHVLCKK---GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A RL   +V S+   P+V +Y  +I G+CK  K+  AE  L +M   G+ PN  TY ++I
Sbjct: 270 AARLLESIV-SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 375 YGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            G CK G  + A  ++ D M K G  P+ + Y+++I+GLC  G +  A  +  +A ++  
Sbjct: 329 NGFCKAGMMQNADKILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +   I Y  L+    KQ    QAL L   M++ G +PDI  Y  ++   C+   + ++  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              +AI  G  P   T+ ++I GY +  N+  A++    M   G  PD ITY  L++GLC
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IR 610
           K  KLD     +++M+ KG +P  +T   L   +CK    + AM + + +  +     I 
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 611 TVNTLIRKLCSEKRVGMAALFF 632
           T+ TLI  LCS   +  A   F
Sbjct: 568 TLCTLICGLCSNGELDKAYELF 589



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 215/477 (45%), Gaps = 40/477 (8%)

Query: 167 GRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G + E   ++  + + GL P + S    + G      LVE AE    +M   GV  +  +
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE-AECYLHKMVNSGVEPNEFT 323

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC---------------- 269
           Y  ++  +C+ G +  AD+ L   + +G I D  T + LI   C                
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 270 DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           +KGF+                G + QA +L+++M+  G  P+++T+ ++++GLCK G   
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +    + +    P++ T+  +I GYCK+  M++A  +L+ M   G+ P+  TY +L
Sbjct: 444 DANGILNDAI-AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G CK    +   D    M ++GCTPNI  YN +I+  CK  +V EA EL K+   R L
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESE 492
             D +T   L+       E  +A  LF  + K    +     +  +I AFC +  +  +E
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K F +   +   P   TY  MI  Y + GNI  A  +       G  P   T G +++ L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           C   +L EA      M+  GI P EV  +  A     + + A   I++E L KK  I
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEEVNSIFEA----DKKEVAAPKIVVEYLLKKSHI 735



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 3/351 (0%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K  + T+  +I+ L   G  E    +  ++ ++ + K     Y  ++  Y ++ K+  
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  + ERM      P+  +Y +++    + G F +A+ +   M   G  P++Y +   + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             C  GR   A  LL     +  + + ++Y  ++S   K+    +A  LF  M+K G+ P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           DI  +  LI   C++  ++ESEK F + +  G+ P   T+   I G  R G I  A +  
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + +   G  PD I+Y  LI G CK SKL EA  +   M+  G+ P E T  T+   +CK 
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           G    A  IL     K +I    T ++LI  LC++  +  A   F++ + K
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 159/353 (45%), Gaps = 19/353 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM-- 159
           +++  L N+     A++ FY A+    F+H + LY      L   G   +A ++M+ M  
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 160 -------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                        V+   ++G L +   ++ +    G      T N ++   C+   ++ 
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ D M + G+  D  +Y  ++   C+  ++        AML++G   +  T  +LI 
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           +FC       + +A EL +EM  +G  P++ T   LI GLC  G  +KA+ LF+ + +  
Sbjct: 540 SFCKDR---KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            +  +   +  MI+ +C++  ++ AE L  +M      P+  TY  +I  +CK GN + A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +  +     +G  P+      +++ LC   R+ EA  ++    Q  +  +++ 
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 235/484 (48%), Gaps = 41/484 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C  G +  A      M   G+  DA +Y  ++ A+CR G + EA   L+ M
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   L++AF   G+   IKQA +++E M   G++P++ T+ VL  GLC+ 
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGW---IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQA 326

Query: 310 GWTEKAFRL-----------------------------------FLKLVRSDNYKPNVHT 334
           G  ++AFRL                                    L+ +R    KP + T
Sbjct: 327 GKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++   CKE K+  A   LE++ E+GL P+  TY +LI  +CK GN  +A+ LMD M 
Sbjct: 387 HNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV 446

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G   + +  N ++  LCK  R ++A ELL    QR    D+++Y  +++ + K+   +
Sbjct: 447 GKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPE 506

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L+ +M++  L P I  Y TLI   CR +++KE+     E +  GL P + TY  +I
Sbjct: 507 PALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIII 566

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y ++G++ +A ++  +M +    PD +T   L++GLC   KLD+A + +ES + KG  
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALF 631
              +T  TL    CK GD  TA+   + ++ K       T N ++  L    R   A   
Sbjct: 627 VDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM 686

Query: 632 FHKL 635
            HKL
Sbjct: 687 LHKL 690



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 207/443 (46%), Gaps = 42/443 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L E  +++  M  +G+     T N +V     LG ++ A +V + M A G   D  +Y
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDR--GAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            ++ V  C+ G+V EA R L   ++R   A+ D  T   L+ A C K +R S   A  LL
Sbjct: 317 NVLAVGLCQAGKVDEAFR-LKDEMERLSTALPDVVTYNTLVDA-CFK-WRCS-SDALRLL 372

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           EEM  KG KP + TH +++  LCK+G  E+A     K+   +   P+V TY  +I  YCK
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCK 431

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-------------- 390
              + +A  L++ M  +GL  +T T  +++Y  CK+  +E A +L+              
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 391 ---------------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
                                D M +    P+I  YN +I GLC+  R++EA + L +  
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELV 551

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D+ TY I++  + K+ + + A     +MV+    PD+    TL+   C   K+ 
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++ K F+  +  G      TY ++I    + G++ +A+ +F  M   G  PD  TY  ++
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVL 671

Query: 550 SGLCKQSKLDEACQFYESMIGKG 572
           S L +  + +EA      +   G
Sbjct: 672 SALSEAGRSEEAHNMLHKLADSG 694



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 196/419 (46%), Gaps = 15/419 (3%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +   ++ EM + G+     T N VV   C+ G +E A    +++   G+  D  +Y  ++
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLI 426

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            AYC+ G V +A   +  M+ +G  +D  TL  ++   C        + A ELL    ++
Sbjct: 427 DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK---MKRYEDAEELLHSPPQR 483

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+ P+  ++  ++    K+   E A RL+ +++      P++ TY  +I G C+ E++  
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER-KLIPSISTYNTLIKGLCRMERLKE 542

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   L  + E+GL+P+  TY  +I+ +CK G+ E A+   + M +    P++   N +++
Sbjct: 543 AIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  G++ +A +L +   ++  + D ITY  L+    K  +   AL  F  M   GL P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA-VKY 529
           D   Y  +++A     + +E+     +   +G     +   S  C  L+  +   A VK 
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFACPLLKPSSADEADVKE 717

Query: 530 FQRMNQIGC---APDNI--TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +   +      A DN   TY   ++GLC   +L EA    + M+ KG+     T +TL
Sbjct: 718 HEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITL 776



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 179/399 (44%), Gaps = 38/399 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ + G + + F+++ EM   GL + T TLN V+   C++   E AEE+      RG
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++ AY +      A R    M++R  I   +T   LI   C       +K
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR---MERLK 541

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L E+V KG  P+  T+ ++I   CK+G  E AFR   K+V  +++KP+V T   +
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE-NSFKPDVVTCNTL 600

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C   K+++A  L E   E+G   +  TY +LI   CKVG+ + A    D M  +G 
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + YN ++  L + GR +EA+ +L K       +      +L      +A+ K+  G
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                                     + + + SEK    A+        ETY   + G  
Sbjct: 721 --------------------------KPEAESSEKAQDNAL--------ETYMERLNGLC 746

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             G +  A      M Q G   D+ TY  L+ GL K+ K
Sbjct: 747 TGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 177/366 (48%), Gaps = 7/366 (1%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + + ++   ++     PN YT  +L+   C KG    A    L  ++     P+  TY  
Sbjct: 190 QASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALAT-LSTMQGFGLSPDAVTYNT 248

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++ +C++  +  A  LL RMK  G+ P   TY +L+    ++G  ++A  +++ M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA--DKITYTILLSEHLKQAETKQ 455
             P++  YN +  GLC+ G+V EA+  LK   +R   A  D +TY  L+    K   +  
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFR-LKDEMERLSTALPDVVTYNTLVDACFKWRCSSD 367

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L   M   G+ P +  +  ++ + C++ K++E+    ++    GL P   TY ++I 
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y + GN++ A      M   G   D  T   ++  LCK  + ++A +   S   +G  P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEKRVGMAALFF 632
            EV+  T+   Y K+ +   A+ + + + ++KL   I T NTLI+ LC  +R+  A    
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 633 HKLLGK 638
           ++L+ K
Sbjct: 548 NELVEK 553



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 6/348 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK-MNRAEM-LLERMKEQGLLPNTNTYTS 372
           A +L   L R    +P++    A++S   +    + +A + +   + E  L PN  T+  
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L++ HC  G    A   +  M   G +P+   YN +++  C+KG + EA  LL +  +  
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +   + TY  L+S   +    KQA  +   M   G  PD+  Y  L    C+  K+ E+ 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 493 KFFQE-AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +   E    +   P   TY +++    +    S A++  + M   G  P  +T+  ++  
Sbjct: 334 RLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLW 608
           LCK+ KL+EA    E +  +G++P  +T  TL   YCK G+ A A  +++ +     K+ 
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
             T+NT++  LC  KR   A    H    +    D VS   +  A ++
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 217/437 (49%), Gaps = 11/437 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  +G+     T N ++   C+   +    E+F+E+  RG   D  +Y  ++ + C+ G
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PN 295
            + EA R    M  RG + +  T ++LI   C  G    I +A EL++EM RK     PN
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG---RIDEARELIQEMTRKSCDVLPN 143

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           + T+   +DGLCK+  T +A  L   L   S    P+  T++ +I G CK  +++ A  +
Sbjct: 144 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            + M   G +PN  TY +L+ G CK    ERA+ +++ M  +G TP++  Y+ ++D  CK
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 263

Query: 415 KGRVQEAYELLKKAFQRE-----LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             RV EA ELL     R      L  DK+T+ IL++   K    +QA  LF  MV   L 
Sbjct: 264 ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 323

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  +  LI   C+  +++ +          G+ P   TY +++ G  + G I  A ++
Sbjct: 324 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 383

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            + M   GC PD+ITYG+L+  LC+ S+ D+A Q    +   G  P  VT   L     K
Sbjct: 384 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 443

Query: 590 QGDSATAMIILESLDKK 606
            G +  A+ +LE +  K
Sbjct: 444 SGKTEQAITVLEEMVGK 460



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 232/482 (48%), Gaps = 15/482 (3%)

Query: 192 NRVVGIACELGLVEYAEEVF-DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           N V+   C  G    A E+F  EM   GV     +Y  ++   C+   +         ++
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           +RG   D  T   LI + C  G    +++A  L  +M  +G  PNV T++VLI+GLCK G
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAG---DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 311 WTEKAFRLFLKLVR-SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL--PNT 367
             ++A  L  ++ R S +  PN+ TY + + G CK+     A  L+  +++  L   P+T
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+++LI G CK G  + A  + D M   G  PN+  YNA+++GLCK  +++ A+ +++ 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG-----LNPDIHAYTTLIAAF 482
              + +  D ITY++L+    K +   +AL L   M   G     L PD   +  LIA  
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+    +++   F+E +   L P   T+ ++I G  + G + +A      M  +G  P+ 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY AL+ GLCK  +++EACQF E M+  G  P  +T  +L Y  C+   +  A+ ++  
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L    W     T N L+  L    +   A     +++GK    D  + AA  +  + S  
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 660 YA 661
            A
Sbjct: 482 LA 483



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 17/413 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEM-- 214
           +++   ++GR+ E   ++ EMT     ++ +  T N  +   C+  +   A E+   +  
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKG 272
            +  V  D  ++  ++   C+ G++ EA      M+  G + +  T   L+   C  DK 
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK- 231

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++A  ++E MV KG  P+V T++VL+D  CK    ++A  L L  + S    PNV
Sbjct: 232 ----MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL-LHGMASRGCTPNV 286

Query: 333 H-----TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
                 T+  +I+G CK     +A  L E M  + L P+  T+ +LI G CK G  E A 
Sbjct: 287 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 346

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           D++DLMG  G  PN+  YNA++ GLCK GR++EA + L++        D ITY  L+   
Sbjct: 347 DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 406

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            + + T  AL L   +   G +PD   Y  L+    +  K +++    +E +  G  P  
Sbjct: 407 CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDS 466

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            T+ +   G  R GN++  ++  + +   G  PD  T  +++  +C+  KLD+
Sbjct: 467 FTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 14/346 (4%)

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V  + +++  LC+ G T +A  +F   +  D   P + TY  +I+G CK   +     L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           E + E+G  P+  TY +LI   CK G+ E A  L   M   GC PN+  Y+ +I+GLCK 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 416 GRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG---LNP 470
           GR+ EA EL+++  ++  ++  + ITY   L    KQ+ T +A  L  R ++ G   ++P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSP 179

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   ++TLI   C+  ++ E+   F + I  G  P   TY +++ G  +   +  A    
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC-----EVTRVTLAY 585
           + M   G  PD ITY  L+   CK S++DEA +    M  +G +P      +VT   L  
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 586 EYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
             CK G+   A  + E +  K     + T   LI  LC   +V  A
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 227/411 (55%), Gaps = 6/411 (1%)

Query: 165 EIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
           ++G++KE  S++I+M   G +P + S  + +V   C++  +    ++ +E+  +G+  + 
Sbjct: 264 QLGKVKEAHSLLIQMEFRGNVPDVVS-YSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQ 322

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  ++   C+ GRV EA++ L  M ++    DN   T LI+ F   G  G++   ++L
Sbjct: 323 YTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF---GKSGNVSVEYKL 379

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            +EM RK   P+  T+T +I GLC+ G   +A +LF +++ S   KP+  TYTA+I GYC
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML-SKGLKPDEVTYTALIDGYC 438

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K  +M  A  L  +M E+GL PN  TYT+L+ G CK G  + A +L+  M ++G  PN+ 
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YNA+I+GLCK G +++A +L+++        D ITYT ++  + K  E  +A  L   M
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  GL P I  +  L+  FC    +++ E+  +  +  G+ P   T+ S++  Y    N+
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            + ++ ++ M+  G  PD  TY  LI G CK   + EA   ++ M+ KG S
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 259/551 (47%), Gaps = 23/551 (4%)

Query: 80  RSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVC 139
           R+ P R  L+        +  I V+ S+ ++    + L FF WA    + R    L  +C
Sbjct: 76  RAEPFRRILKPFESKFRPDHLIWVLMSIRDDYK--LVLDFFDWA----RLRRDPSLESLC 129

Query: 140 ATSLIS--NGNFERAHE-VMQCMVSSFAEIGRLKEGFSMVIEMTNNGL---PLITSTLNR 193
               I+  + +   AH  V +       ++G   + F+  +  T       PL+     +
Sbjct: 130 IVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLVFDVFFQ 189

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR-MGRVTEADRWLSAMLDR 252
           V+    E GL+  A ++FD++   GV     S  L +         +  A R      + 
Sbjct: 190 VL---VEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEV 246

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   +  +  +++   C     G +K+A  LL +M  +G  P+V +++V++DG C+    
Sbjct: 247 GVCWNTVSYNIILHLLCQ---LGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQL 303

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
            K  +L  +L R    KPN +TY ++IS  CK  ++  AE +L  MK Q + P+   YT+
Sbjct: 304 GKVLKLMEELQRK-GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI G  K GN    Y L D M ++   P+   Y ++I GLC+ G+V EA +L  +   + 
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L+ D++TYT L+  + K  E K+A  L  +MV+ GL P++  YT L+   C+  ++  + 
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +   E    GL P   TY ++I G  + GNI  AVK  + M+  G  PD ITY  ++   
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIR- 610
           CK  ++ +A +    M+ KG+ P  VT   L   +C  G       +I   LDK +    
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 611 -TVNTLIRKLC 620
            T N+L+++ C
Sbjct: 603 TTFNSLMKQYC 613



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 242/520 (46%), Gaps = 43/520 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDE 213
           V         E G L E   +  ++ N G+ +   + N  +  ++     +  A  VF E
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFRE 242

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
               GVC +  SY +++   C++G+V EA   L  M  RG + D  + ++++  +C    
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA------------------ 315
            G +    +L+EE+ RKG KPN YT+  +I  LCK G   +A                  
Sbjct: 303 LGKV---LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 316 -----------------FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
                            ++LF ++ R     P+  TYT+MI G C+  K+  A  L   M
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +GL P+  TYT+LI G+CK G  + A+ L + M ++G TPN+  Y A++DGLCK G V
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A ELL +  ++ LQ +  TY  L++   K    +QA+ L   M  AG  PD   YTT+
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           + A+C+  +M ++ +  +  +  GL PT  T+  ++ G+   G +    +  + M   G 
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+  T+ +L+   C ++ +    + Y+ M  +G+ P   T   L   +CK  +   A  
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWF 658

Query: 599 ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + + + +K   L   + N+LI+     K+   A   F ++
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 201/427 (47%), Gaps = 39/427 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV-------- 210
           +V  + ++ +L +   ++ E+   GL     T N ++   C+ G V  AE+V        
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 211 ---------------------------FDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                                      FDEM  + +  D  +Y  M+   C+ G+V EA 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +  S ML +G   D  T T LI  +C  G    +K+AF L  +MV KG  PNV T+T L+
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAG---EMKEAFSLHNQMVEKGLTPNVVTYTALV 469

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DGLCK G  + A  L L  +     +PNV TY A+I+G CK   + +A  L+E M   G 
Sbjct: 470 DGLCKCGEVDIANEL-LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+T TYT+++  +CK+G   +A++L+ +M  +G  P I  +N +++G C  G +++   
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+K    + +  +  T+  L+ ++  +   +  + ++  M   G+ PD + Y  LI   C
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + + MKE+    +E +  G   T  +Y S+I G+ +      A K F+ M   G   +  
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKE 708

Query: 544 TYGALIS 550
            Y   + 
Sbjct: 709 IYDIFVD 715


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 237/460 (51%), Gaps = 19/460 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F   G +     +V  M   G+     T N VV   C+ G +E A ++FDEM   G
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  +V  YC+ G + EA    + M  +G + D  T T LI A C  G   +++
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG---NLE 312

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ +M  +G + N +T T LIDG C+ G+ + A  L +K +R    +P+V  Y  +
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL-LAMKEMRECRIQPSVVCYNVL 371

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYCK  +M+ A  L+  M+ +G+ P+  TY++++ G+CK+G+ + A++L   M K+G 
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+++I GLC++ R+ +A EL +K  Q  LQ D+ TYT L+  H K+   ++AL 
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY-------- 510
           L   M+K G+ PD+  Y+ LI    +  + KE+++   +       P    Y        
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCR 551

Query: 511 -------TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                   +++ G+   G ++ A K +Q M       D   Y  LI G C+   + +A  
Sbjct: 552 TAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALS 611

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           F++ ++  G SP   + ++L     ++G +  A  +++ L
Sbjct: 612 FHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 38/417 (9%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           S+  A  LL  M+R G  PNVYT+ +L+  LC +G  E+A  +    +R     PNV TY
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +++ +C+  +++ AE L+  M+E G+ P+  T+ +++ G CK G  E A  + D M +
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EG TP+  +YN ++ G CK G + EA  +  +  Q+ +  D +T+T L+    +    ++
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313

Query: 456 ALGL----------------------FCR-------------MVKAGLNPDIHAYTTLIA 480
           A+ L                      FCR             M +  + P +  Y  LI 
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +C+  +M E+ +   E    G+ P   TY++++ GY + G+  SA +  ++M + G  P
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D ITY +LI GLC++ +L +AC+ +E M+  G+ P E T  TL   +CK+G+   A+ + 
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 601 ESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + + KK  +  V T   LI  L    R   A     KL  +D   D +   AL + C
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 206/420 (49%), Gaps = 21/420 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-SAMLDRGAILDNATLTLLI 265
           A  +   M   GV  +  +Y ++V A C  G+  EA   +   M   G   +  T   L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            AFC  G    +  A  L+  M   G +P++ T   +++GLCK G  E A ++F ++ R 
Sbjct: 198 AAFCRAG---EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR- 253

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           +   P+  +Y  ++SGYCK   ++ A  +   M ++G++P+  T+TSLI+  C+ GN ER
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L+  M + G   N + + A+IDG C+ G + +A   +K+  +  +Q   + Y +L++
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K     +A  L   M   G+ PD+  Y+T+++ +C+      + +  ++ +  G+ P
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY+S+I G   +  +  A + F++M Q+G  PD  TY  LI G CK+  + +A   +
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           + MI KG+ P                D  T  ++++ L K    +    L+ KL  E  V
Sbjct: 494 DEMIKKGVLP----------------DVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPV 537



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 18/318 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + ++GR+ E   ++ EM   G+     T + ++   C++G  + A E+  +M  +G
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA +Y  ++   C   R+ +A      ML  G   D  T T LI   C +G   +++
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG---NVQ 487

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH----- 333
           +A  L +EM++KG  P+V T++VLIDGL K   T++A RL  KL   D    N+      
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547

Query: 334 ---------TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                    +  A++ G+  +  MN+A+ + + M ++    + + Y+ LI+GHC+ GN  
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +A      + + G +PN  +  +++ GL ++G   EA  ++++       AD  T   L+
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667

Query: 445 SEHLKQAETK-QALGLFC 461
             + K+     QA G  C
Sbjct: 668 DLNRKEGVGYFQAQGELC 685


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 270/603 (44%), Gaps = 52/603 (8%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV  L     +   L FF+W      F+H M  ++     L+ +  F  A  V   M+ S
Sbjct: 81  VVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS 140

Query: 163 FAEIGRLKE--------------GFS----------------------MVIEMTNNGLPL 186
               G +K               G++                      M I+M N+G+  
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRP 200

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
              T N ++ I C+ G V+ A+ +   +       +A +Y  +++ +CR   +  A    
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M+  G   ++ T + LI   C +G    +++A ++LEEMV+KG +P VYT+T+ +  L
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEG---RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G + +A  L  K+ +     PN+ T+TA+ISG  ++ K   A  L  +M   GL+P 
Sbjct: 318 CDAGCSSEAVELLGKM-KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T TY +LI   C  G FE A+ +   M   G  P+   YN II   C  G +Q+A  +  
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K  +     + ITY  L+  + KQ     A+ L   M   GL PD   YT LI+ F R  
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K++ +   F   +  G+ P   TYT++I GY     +  A+  F +M + G  P + TY 
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +ISG  K + + EA  F   M+ +G+ P  +T  +     C+ G +  A  I   ++K+
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLL------GKDQNVDRVSLAALKNACYES 657
            +   + T ++LI  LC E R   A ++   LL      G + NVD  +   +K  C E 
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMY--NLLARLTHYGCEPNVDTYT-TLVKGLCGEG 673

Query: 658 NKY 660
             Y
Sbjct: 674 RCY 676



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 231/522 (44%), Gaps = 44/522 (8%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L   F+M   M  +G    + T + ++   C  G +E A ++ +EM  +G+     +Y +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
            +V+ C  G  +EA   L  M  RG + +  T T LI+        G  + A  L  +M+
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD---GKFEIAIGLYHKML 369

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G  P   T+  LI+ LC +G  E AF +F K + S    P+  TY  +I  +C    +
Sbjct: 370 ADGLVPTTVTYNALINQLCVEGRFETAFTIF-KWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A ++ ++M + G  PN  TY +LIYG+CK GN   A  L+++M   G  P+ + Y  +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G  + G+++ A  L     +  +  + +TYT ++  +   A+   AL LF +MV++G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P    Y  +I+ F +   + E+E F  + +  GL P   TYTS I G  R+G    A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 529 YFQ-------------------------------------RMNQIGCAPDNITYGALISG 551
            F                                      R+   GC P+  TY  L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
           LC + +  EA Q   SM  KG+ P E     L    CK     +A+ I  S+D    +L 
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +     LI  LC E  +  A   F  +L K  N D V+   L
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 226/471 (47%), Gaps = 9/471 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +    ++S  +  G+ +    +  +M  +GL   T T N ++   C  G  E A  +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M + G      +Y  ++  +C MG + +A      ML  G+  +  T   LI  +C +G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG- 461

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             ++  A  LLE M   G KP+ +T+T LI G  + G  E A  LF  ++      PN  
Sbjct: 462 --NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH-GISPNHV 518

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYTA+I GY    K++ A  L  +M E G LP++ TY  +I G  K  +   A +    M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ--A 451
            K+G  PN+  Y + IDGLC+ GR   A+++  +  +R    +  TY+ L+    ++  A
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           E  +   L  R+   G  P++  YTTL+   C + +  E+++        GL P++E Y 
Sbjct: 639 EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G  ++  + SA+  F  M+ +G       Y ALI  LCK++ ++EA   +++M+ K
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEK 758

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRTVNTLIRKL 619
             +  EV    L     K+G++   + +L   ES +  L  +T   L R+L
Sbjct: 759 HWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 134/313 (42%), Gaps = 8/313 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++  +  + ++ +  ++  +M  +G    + T N ++    +   +  AE    
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +Y   +   CR GR   A +    M  R    +  T + LI   C +G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            R    + + LL  +   G +PNV T+T L+ GLC +G   +A +L + + +    +P+ 
Sbjct: 637 -RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM-QKKGLQPSE 694

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y A++ G CK  K+  A  +   M   G   + + Y +LI   CK    E A  +   
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE------ 446
           M ++    +  A+  ++DGL K+G      +LL     R    +  TY +L  E      
Sbjct: 755 MLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDC 814

Query: 447 HLKQAETKQALGL 459
            +K  +  Q LG+
Sbjct: 815 AIKIPQISQQLGI 827


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 239/487 (49%), Gaps = 8/487 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +V +    G L +  + +  M   GL     T N ++   C  G++  A  +  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G+     +Y  +V A+ R+G + +A + + +M   G   D  T  +L    C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 273 FRGSIKQAFELLEEMVRKGWK-PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
               + +AF L +EM R G   P+V T+  L+D   K   +  A RL L+ +R    KP 
Sbjct: 328 ---KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRL-LEEMRDKGVKPT 383

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + T+  ++   CKE K+  A   LE++ E+GL P+  TY +LI  +CK GN  +A+ LMD
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G   + +  N ++  LCK  R ++A ELL    QR    D+++Y  +++ + K+ 
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             + AL L+ +M++  L P I  Y TLI   CR +++KE+     E +  GL P + TY 
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I  Y ++G++ +A ++  +M +    PD +T   L++GLC   KLD+A + +ES + K
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMA 628
           G     +T  TL    CK GD  TA+   + ++ K       T N ++  L    R   A
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 629 ALFFHKL 635
               HKL
Sbjct: 684 HNMLHKL 690



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 205/442 (46%), Gaps = 40/442 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L E  +++  M  +G+     T N +V     LG ++ A +V + M A G   D  +Y
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRG-AILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
            ++ +  C+ G+V EA R    M   G A+ D  T   L+ A C K +R S   A  LLE
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDA-CFK-WRCS-SDALRLLE 373

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  KG KP + TH +++  LCK+G  E+A     K+   +   P+V TY  +I  YCK 
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCKA 432

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM--------------- 390
             + +A  L++ M  +GL  +T T  +++Y  CK+  +E A +L+               
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 391 --------------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
                               D M +    P+I  YN +I GLC+  R++EA + L +  +
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVE 552

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           + L  D+ TY I++  + K+ + + A     +MV+    PD+    TL+   C   K+ +
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + K F+  +  G      TY ++I    + G++ +A+ +F  M   G  PD  TY  ++S
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672

Query: 551 GLCKQSKLDEACQFYESMIGKG 572
            L +  + +EA      +   G
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSG 694



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 15/419 (3%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +   ++ EM + G+     T N VV   C+ G +E A    +++   G+  D  +Y  ++
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLI 426

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            AYC+ G V +A   +  M+ +G  +D  TL  ++   C        + A ELL    ++
Sbjct: 427 DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK---MKRYEDAEELLHSPPQR 483

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+ P+  ++  ++    K+   E A RL+ +++      P++ TY  +I G C+ E++  
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER-KLIPSISTYNTLIKGLCRMERLKE 542

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   L    E+GL+P+  TY  +I+ +CK G+ E A+   + M +    P++   N +++
Sbjct: 543 AIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  G++ +A +L +   ++  + D ITY  L+    K  +   AL  F  M   GL P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA-VKY 529
           D   Y  +++A     + +E+     +   +G     +   S  C  L+  +   A VK 
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFACPLLKPSSADEADVKE 717

Query: 530 FQRMNQIGC---APDNI--TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +   +      A DN   TY   ++GLC   +L EA    + M+ KG+     T +TL
Sbjct: 718 HEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITL 776



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 177/399 (44%), Gaps = 38/399 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ + G + + F+++ EM   GL + T TLN V+   C++   E AEE+      RG
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++ AY +      A R    M++R  I   +T   LI   C       +K
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR---MERLK 541

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L E V KG  P+  T+ ++I   CK+G  E AFR   K+V  +++KP+V T   +
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE-NSFKPDVVTCNTL 600

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C   K+++A  L E   E+G   +  TY +LI   CKVG+ + A    D M  +G 
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + YN ++  L + GR +EA+ +L K       +      +L      +A+ K+  G
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                                     + + + SEK    A+        ETY   + G  
Sbjct: 721 --------------------------KPEAESSEKAQDNAL--------ETYMERLNGLC 746

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             G +  A      M Q G   D  TY  L+ GL K+ K
Sbjct: 747 TGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 172/356 (48%), Gaps = 7/356 (1%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + + ++   ++     PN YT  +L+   C KG    A    L  ++     P+  TY  
Sbjct: 190 QASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALAT-LSTMQGFGLSPDAVTYNT 248

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++ +C++  +  A  LL RMK  G+ P   TY +L+    ++G  ++A  +++ M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA--DKITYTILLSEHLKQAETKQ 455
             P++  YN +  GLC+ G+V EA+  LK   +R   A  D +TY  L+    K   +  
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFR-LKDEMERLGTALPDVVTYNTLVDACFKWRCSSD 367

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L   M   G+ P +  +  ++ + C++ K++E+    ++    GL P   TY ++I 
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y + GN++ A      M   G   D  T   ++  LCK  + ++A +   S   +G  P
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEKRVGMA 628
            EV+  T+   Y K+ +   A+ + + + ++KL   I T NTLI+ LC  +R+  A
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 6/348 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK-MNRAEM-LLERMKEQGLLPNTNTYTS 372
           A +L   L R    +P++    A++S   +    + +A + +   + E  L PN  T+  
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L++ HC  G    A   +  M   G +P+   YN +++  C+KG + EA  LL +  +  
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +   + TY  L+S   +    KQA  +   M   G  PD+  Y  L    C+  K+ E+ 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 493 KFFQEAITAGL-FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +   E    G   P   TY +++    +    S A++  + M   G  P  +T+  ++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLW 608
           LCK+ KL+EA    E +  +G++P  +T  TL   YCK G+ A A  +++ +     K+ 
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
             T+NT++  LC  KR   A    H    +    D VS   +  A ++
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 7/293 (2%)

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRV--QEAYELLKKAFQRELQADKITYTILLSE 446
           L  L  + G  P++ A NA++  L +      Q + ++ +   +  L  +  T+ +L+  
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           H  +     AL     M   GL+PD   Y TL+ A CR+  + E+          G+ PT
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           + TY +++  + R G I  A K  + M   G  PD  TY  L  GLC+  K+DEA +  +
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKD 337

Query: 567 SMIGKGIS-PCEVTRVTLAYEYCKQGDSATAMIILESL-DK--KLWIRTVNTLIRKLCSE 622
            M   G + P  VT  TL     K   S+ A+ +LE + DK  K  + T N +++ LC E
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            ++  A     K+  +    D ++   L +A C   N    F+ + + + +G+
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 222/476 (46%), Gaps = 36/476 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + Q ++ + ++  R+ E   ++ EM   G P   +T N V+   C L  V    ++ D M
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSA-------------------------- 248
             +G   +  +Y  ++   C+  R+ EA   LS                           
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEAT 366

Query: 249 ------MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                 M++ G + D  T + L+   C KG  GS   A EL+ +M  KG KPN+ T+T+L
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS---ALELVNDMDAKGCKPNLNTYTIL 423

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG CKKG  E+A  L L+ + +  +  N   Y A+IS  CK  K++ A  +   M  +G
Sbjct: 424 IDGFCKKGQLEEA-GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  T+ SLI+G C+V   E A  L   M  EG   N   +N +I    ++G +QEA 
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L+     R    D+ITY  L+    K    ++ LGLF  M++ GL P I     LI  F
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGF 602

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   K+  + +F ++ I  G  P   TY S+I G  + G I  A+  F+++   G  PD+
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           ITY  LI  LC++   D+AC      +  G  P +VT   L Y + KQ +S    I
Sbjct: 663 ITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTI 718



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 233/477 (48%), Gaps = 12/477 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M + G+     T   V+   C +  V+ A  +  +M   G   ++  Y+ ++ A  +  
Sbjct: 200 DMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRD 259

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV EA + L  M   G   D  T   +I  FC       + +  +L++ M+ KG+ PN  
Sbjct: 260 RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR---LNRVLEGAKLVDRMILKGFTPNDM 316

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL-E 356
           T+  L+ GLCK    ++A  L  K+       PNV  +  +++G+ +  ++N A   + +
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVP-----GPNVVHFNTLVNGFVRNGRLNEATAFVYD 371

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           +M   G +P+  T+++L+ G CK G F  A +L++ M  +GC PN+  Y  +IDG CKKG
Sbjct: 372 KMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKG 431

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +++EA  +L++   +    + + Y  L+S   K  +  +AL +F  M   G  PDI  + 
Sbjct: 432 QLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFN 491

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   CR  +M+++   +++ +  G+     T+ ++I  +LR G I  A+K    M   
Sbjct: 492 SLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR 551

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC  D ITY  LI  LCK   +++    +E MI KG++P  +T   L   +C  G    A
Sbjct: 552 GCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNA 611

Query: 597 MIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +  +  +  + +   I T N+LI  LC   R+  A   F KL  +    D ++   L
Sbjct: 612 LEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 204/469 (43%), Gaps = 54/469 (11%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL--------DNATLTLL 264
           +M   G+    S + L++  Y R G   +A R L   LD   +          N  L +L
Sbjct: 129 QMKEEGIVFRESLFILIMKYYGRAGLPGQATRLL---LDMKGVYCCEPSFRSYNVVLDVL 185

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +   C          A  +  +M+ KG  PN YT  +++  LC     + A  L L+ + 
Sbjct: 186 VVGNCPS-------VASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC-LLLRDMT 237

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                PN   Y  +I    K ++++ A  LLE M   G  P+ NT+ ++IYG C++    
Sbjct: 238 KHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVL 297

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK--------------AFQ 430
               L+D M  +G TPN   Y  ++ GLCK  R+ EA  LL K               F 
Sbjct: 298 EGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFV 357

Query: 431 RELQ------------------ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           R  +                   D  T++ L++   K+     AL L   M   G  P++
Sbjct: 358 RNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNL 417

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + YT LI  FC++ +++E+    +E +T G       Y ++I    + G I  A+  F  
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M+  GC PD  T+ +LI GLC+  ++++A   Y  M+ +G+    VT  TL + + ++G+
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 593 SATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              A+ ++  +  +   L   T N LI+ LC    V      F +++ K
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 48/362 (13%)

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIID 410
           + LL +MKE+G++   + +  ++  + + G   +A  L+ D+ G   C P+  +YN ++D
Sbjct: 124 DRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLD 183

Query: 411 ----GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
               G C        Y++L K     +  +  T+ +++       E   A  L   M K 
Sbjct: 184 VLVVGNCPSVASNVFYDMLSKG----VSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKH 239

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P+   Y TLI A  ++ ++ E+ K  +E    G  P   T+ ++I G+ R   +   
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF---------------------- 564
            K   RM   G  P+++TYG L+ GLCK  ++DEA                         
Sbjct: 300 AKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRN 359

Query: 565 ----------YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
                     Y+ MI  G  P   T  TL    CK+G   +A+ ++  +D K     +NT
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419

Query: 615 ---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLS 667
              LI   C + ++  A L   ++L K  +++ V   AL +A  +  K      +F ++S
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 668 QR 669
            +
Sbjct: 480 SK 481


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 270/603 (44%), Gaps = 52/603 (8%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV  L     +   L FF+W      F+H M  ++     L+ +  F  A  V   M+ S
Sbjct: 81  VVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS 140

Query: 163 FAEIGRLKE--------------GFS----------------------MVIEMTNNGLPL 186
               G +K               G++                      M I+M N+G+  
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRP 200

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
              T N ++ I C+ G V+ A+ +   +       +A +Y  +++ +CR   +  A    
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M+  G   ++ T + LI   C +G    +++A ++LEEMV+KG +P VYT+T+ +  L
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEG---RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G + +A  L  K+ +     PN+ T+TA+ISG  ++ K   A  L  +M   GL+P 
Sbjct: 318 CDAGCSSEAVELLGKM-KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T TY +LI   C  G FE A+ +   M   G  P+   YN II   C  G +Q+A  +  
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K  +     + ITY  L+  + KQ     A+ L   M   GL PD   YT LI+ F R  
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K++ +   F   +  G+ P   TYT++I GY     +  A+  F +M + G  P + TY 
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +ISG  K + + EA  F   M+ +G+ P  +T  +     C+ G +  A  I   ++K+
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLL------GKDQNVDRVSLAALKNACYES 657
            +   + T ++LI  LC E R   A ++   LL      G + NVD  +   +K  C E 
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMY--NLLARLTHYGCEPNVDTYT-TLVKGLCGEG 673

Query: 658 NKY 660
             Y
Sbjct: 674 RCY 676



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 230/522 (44%), Gaps = 44/522 (8%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L   F+M   M  +G    + T + ++   C  G +E A ++ +EM  +G+     +Y +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
            +V+ C  G  +EA   L  M  RG + +  T T LI+        G  + A  L  +M+
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD---GKFEIAIGLYHKML 369

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G  P   T+  LI+ LC +G  E AF +F K + S    P+  TY  +I  +C    +
Sbjct: 370 ADGLVPTTVTYNALINQLCVEGRFETAFTIF-KWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A ++ ++M + G  PN  TY +LIYG+CK GN   A  L+++M   G  P+ + Y  +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G  + G+++ A  L     +  +  + +TYT ++  +   A+   AL LF +MV++G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P    Y  +I+ F +   + E+E F  + +  GL P   TYTS I G  R+G    A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 529 YFQ-------------------------------------RMNQIGCAPDNITYGALISG 551
            F                                      R+   GC P+  TY  L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
           LC + +  EA Q   SM  KG+ P E     L    CK     +A+ I  S+D    +L 
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +     LI  LC E  +  A   F  +L K  N D V    L
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVL 770



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 226/471 (47%), Gaps = 9/471 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +    ++S  +  G+ +    +  +M  +GL   T T N ++   C  G  E A  +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M + G      +Y  ++  +C MG + +A      ML  G+  +  T   LI  +C +G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG- 461

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             ++  A  LLE M   G KP+ +T+T LI G  + G  E A  LF  ++      PN  
Sbjct: 462 --NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH-GISPNHV 518

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYTA+I GY    K++ A  L  +M E G LP++ TY  +I G  K  +   A +    M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ--A 451
            K+G  PN+  Y + IDGLC+ GR   A+++  +  +R    +  TY+ L+    ++  A
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           E  +   L  R+   G  P++  YTTL+   C + +  E+++        GL P++E Y 
Sbjct: 639 EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G  ++  + SA+  F  M+ +G       Y ALI  LCK++ ++EA   +++M+ K
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEK 758

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRTVNTLIRKL 619
             +  EV    L     K+G++   + +L   ES +  L  +T   L R+L
Sbjct: 759 HWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 8/313 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++  +  + ++ +  ++  +M  +G    + T N ++    +   +  AE    
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +Y   +   CR GR   A +    M  R    +  T + LI   C +G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            R    + + LL  +   G +PNV T+T L+ GLC +G   +A +L + + +    +P+ 
Sbjct: 637 -RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM-QKKGLQPSE 694

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y A++ G CK  K+  A  +   M   G   + + Y +LI   CK    E A  +   
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE------ 446
           M ++    +   +  ++DGL K+G      +LL     R    +  TY +L  E      
Sbjct: 755 MLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDC 814

Query: 447 HLKQAETKQALGL 459
            +K  +  Q LG+
Sbjct: 815 AIKIPQISQQLGI 827


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 220/427 (51%), Gaps = 40/427 (9%)

Query: 207 AEEVFDEMCARGVCADAS-SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
           A +VFD M   G CA  S SY +++   C +GR+ EA      M ++G      T T+LI
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            A CD   RG I +AF L +EM+ +G KPNV+T+TVLIDGLC+ G  E+A  +  K+V+ 
Sbjct: 309 KALCD---RGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK- 364

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D   P+V TY A+I+GYCK+ ++  A  LL  M+++   PN  T+  L+ G C+VG   +
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L+  M   G +P+I +YN +IDGLC++G +  AY+LL      +L+ D +T+T +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIIN 484

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC---------------------- 483
              KQ +   A      M++ G++ D    TTLI   C                      
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544

Query: 484 -------------RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
                        +  K+KE      +    GL P+  TYT+++ G +R G+IS + +  
Sbjct: 545 TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRML 604

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M   GC P+   Y  +I+GLC+  +++EA +   +M   G+SP  VT   +   Y   
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 591 GDSATAM 597
           G    A+
Sbjct: 665 GKLDRAL 671



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 202/414 (48%), Gaps = 4/414 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E+GRL+E F +  +M   G    T T   ++   C+ GL++ A  +FDEM ARG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G++ EA+     M+  G      T   LI  +C  G    + 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDG---RVV 388

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AFELL  M ++  KPNV T   L++GLC+ G   KA  L LK +  +   P++ +Y  +
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL-LKRMLDNGLSPDIVSYNVL 447

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+E  MN A  LL  M    L P+  T+T++I   CK G  + A   + LM ++G 
Sbjct: 448 IDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +      +IDG+C  G+ ++A  +L+   +  +     +  ++L    K  + K+ L 
Sbjct: 508 SLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELA 567

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  ++ K GL P +  YTTL+    R   +  S +  +    +G  P    YT +I G  
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLC 627

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           + G +  A K    M   G +P+++TY  ++ G     KLD A +   +M+ +G
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 243/526 (46%), Gaps = 49/526 (9%)

Query: 143 LISNGNFERAHEVMQCMVSSFA----EIGRLKEGFSMVIEMTNNGL--PLITSTLNRVVG 196
           ++S+G F  AH+V+  ++   +    E+ +L   F  + E++   L  P  +S L  +  
Sbjct: 113 IVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAK 172

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           +  +LG + Y    +  M A G       Y+ +V A C+ G    A+ ++  +L  G +L
Sbjct: 173 L--DLGFLAYV--TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLL 228

Query: 257 DNATLTLLITAFCDKGFR----------------------------------GSIKQAFE 282
           D+  +T L+  FC +G                                    G +++AF 
Sbjct: 229 DSHIVTSLLLGFC-RGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFG 287

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  KG +P+  T+TVLI  LC +G  +KAF LF +++ +   KPNVHTYT +I G 
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-ARGCKPNVHTYTVLIDGL 346

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C++ K+  A  +  +M + G+ P+  TY +LI G+CK G    A++L+ +M K  C PN+
Sbjct: 347 CRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             +N +++GLC+ G+  +A  LLK+     L  D ++Y +L+    ++     A  L   
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTS 466

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M    L PD   +T +I AFC+Q K   +  F    +  G+   + T T++I G    G 
Sbjct: 467 MNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGK 526

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
              A+   + + ++       +   ++  L K  KL E       +   G+ P  VT  T
Sbjct: 527 TRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTT 586

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRV 625
           L     + GD + +  +LE +     +  V     +I  LC   RV
Sbjct: 587 LVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 180/409 (44%), Gaps = 41/409 (10%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE--KAFRLFLKLVRSDNYKPNVHTYT 336
           Q  +LL+ +V  G     +   V +   C +   E  K    F +L     ++ N   Y+
Sbjct: 105 QKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYS 164

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG--------------- 381
           +++    K +    A +   RM+  G +     Y +++   CK G               
Sbjct: 165 SLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKV 224

Query: 382 --------------------NFERAYDLMDLMGKEG-CTPNIYAYNAIIDGLCKKGRVQE 420
                               N   A  + DLM +EG C PN  +Y+ +I GLC+ GR++E
Sbjct: 225 GFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEE 284

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A+ L  +  ++  Q    TYT+L+     +    +A  LF  M+  G  P++H YT LI 
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLID 344

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             CR  K++E+    ++ +  G+FP+  TY ++I GY +DG +  A +    M +  C P
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           +  T+  L+ GLC+  K  +A    + M+  G+SP  V+   L    C++G    A  +L
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLL 464

Query: 601 ESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            S+   D +    T   +I   C + +  +A+ F   +L K  ++D V+
Sbjct: 465 TSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 189/405 (46%), Gaps = 39/405 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G+  +   ++  M +NGL     + N ++   C  G +  A ++   M +  
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  D  ++  ++ A+C+ G+   A  +L  ML +G  LD  T T LI   C+ G      
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531

Query: 273 -------------------------FRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                     +G  +K+   +L ++ + G  P+V T+T L+DGL
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            + G    +FR+ L+L++     PNV+ YT +I+G C+  ++  AE LL  M++ G+ PN
Sbjct: 592 IRSGDISGSFRM-LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG--LCKKGRVQEAYEL 424
             TYT ++ G+   G  +RA + +  M + G   N   Y++++ G  L +KG  +   E 
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPEC 710

Query: 425 LKKAFQ--RELQADKITYTILLSEHL-KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           +K+      +L        I L   L K+  T ++ GL   ++K+G+  +  A   ++ +
Sbjct: 711 IKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLE-KAIDIIMES 769

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           +C +KK  +  +     + +G  P+ +++  +I G  ++G+   A
Sbjct: 770 YCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERA 814



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 133/321 (41%), Gaps = 5/321 (1%)

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C++E +       E  +  G   N   Y+SL+    K+     AY     M  +G    +
Sbjct: 136 CEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGM 195

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  I++ LCK G  + A   + K  +     D    T LL    +    + AL +F  
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255

Query: 463 MVKAGL-NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           M + G   P+  +Y+ LI   C   +++E+     +    G  P+  TYT +I      G
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            I  A   F  M   GC P+  TY  LI GLC+  K++EA      M+  GI P  +T  
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 582 TLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   YCK G    A  +L  ++K   K  +RT N L+  LC   +   A     ++L  
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 639 DQNVDRVSLAALKNA-CYESN 658
             + D VS   L +  C E +
Sbjct: 436 GLSPDIVSYNVLIDGLCREGH 456



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 124/265 (46%), Gaps = 14/265 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +LKE  +M+ ++   GL     T   +V      G +  +  + + M   G   +   Y 
Sbjct: 561 KLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYT 620

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++   C+ GRV EA++ LSAM D G   ++ T T+++  + + G    + +A E +  M
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG---KLDRALETVRAM 677

Query: 288 VRKGWKPNVYTHTVLIDG--LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA-----MIS 340
           V +G++ N   ++ L+ G  L +KG  E       +L+   +    +   T+     +++
Sbjct: 678 VERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELI---SVVEQLGGSTSGLCIFLVT 734

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
             CKE + + +  L++ + + G+         ++  +C      +  +L+ L+ K G  P
Sbjct: 735 RLCKEGRTDESNGLVQTILKSGVFLE-KAIDIIMESYCSKKKHTKCVELITLVLKSGFVP 793

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELL 425
           +  ++  +I GL K+G  + A EL+
Sbjct: 794 SFKSFCLVIQGLKKEGDTERARELV 818



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 25/215 (11%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIG-RLKEGFSMVIEMTNNGLPLITSTLNRV 194
           Y V     ++NG  +RA E ++ MV    E+  R+         ++  G+        R 
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI--------RE 705

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
               C   L+   E++       G+C        +V   C+ GR  E++  +  +L  G 
Sbjct: 706 TDPECIKELISVVEQLGGS--TSGLCI------FLVTRLCKEGRTDESNGLVQTILKSGV 757

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
            L+ A + +++ ++C K       +  EL+  +++ G+ P+  +  ++I GL K+G TE+
Sbjct: 758 FLEKA-IDIIMESYCSKKKH---TKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTER 813

Query: 315 AFRLFLKLVRSDNY--KPNVHTYTA--MISGYCKE 345
           A  L ++L+ S+    K  V  Y    M +G C E
Sbjct: 814 ARELVMELLTSNGVVEKSGVLPYVECLMETGDCSE 848


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 255/534 (47%), Gaps = 37/534 (6%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +A  GR++E   ++  M+ +G+       N ++    + G +E A     E+
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-- 272
             RG+  DA ++   ++ Y + G++TEA ++   MLD G + +N   T+LI      G  
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505

Query: 273 ------FR------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                 FR                        G +++A ++  E+  KG  P+V+T++ L
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G CK+G  EKAF L  ++       PN+  Y A++ G CK   + RA  L + M E+G
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L P++ TY+++I G+CK  N   A+ L   M  +G  P+ + YNA++ G CK+G +++A 
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L ++  Q+   A  +++  L+  + K  + ++A  LF  M+   + PD   YTT+I   
Sbjct: 685 NLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 743

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+  KM+E+   F+E     L     TYTS++ GY + G  S     F++M   G  PD 
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TYG +I   CK+  L EA +  + ++GKG+         L    CK+ D   A  +L+ 
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 863

Query: 603 LDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + +   K  +   +TL+R      ++  A   F  +       D  +L  L N 
Sbjct: 864 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 171/659 (25%), Positives = 287/659 (43%), Gaps = 68/659 (10%)

Query: 50  STSSSPSPPQSLVKTVCSMVLESYYQQFHLRSS-PPRLNLQIDIDSLTHEQAITVVASLA 108
           STS+  S   +  + +   + ++ ++   + S  P +LN  + I ++ H+  +     L 
Sbjct: 30  STSTPTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDV-IRAVLHQNQVGDPKRL- 87

Query: 109 NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV-------- 160
                   L FFYW+        F+  + + A  L ++  F  A+ V+  M+        
Sbjct: 88  --------LDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSS 139

Query: 161 ------------------------SSFAEIGRLKEGFSMVIEMTNN-------------- 182
                                    S+  +G L E  ++     N+              
Sbjct: 140 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRS 199

Query: 183 ----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
               GL   T T   +    C    +  A+  F+EM   G+  D ++   ++  + R G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + E  R    M+  G  ++  T  +LI   C     G +++A E+L+ M+  G KPN  T
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCK---FGKMEKAAEILKGMITLGCKPNSRT 316

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
             +LI+G C++    +A  L L  +   N  P+  +Y AMI+G C  + ++ A  LLE+M
Sbjct: 317 FCLLIEGYCREHNMGRALEL-LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 375

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              GL PN   Y++LI G+   G  E A  L+D M   G  P+I+ YNAII  L K G++
Sbjct: 376 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 435

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA   L +   R L+ D +T+   +  + K  +  +A   F  M+  GL P+   YT L
Sbjct: 436 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 495

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I    +   + E+   F+     G+ P  +T ++ I G L++G +  A+K F  + + G 
Sbjct: 496 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY +LISG CKQ ++++A + ++ M  KGI+P       L    CK GD   A  
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 615

Query: 599 ILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + + + +K       T +T+I   C  + V  A   FH++  K          AL + C
Sbjct: 616 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 674



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 245/557 (43%), Gaps = 48/557 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G + E   +   M + G+P+   T N ++   C+ G +E A E+   M   G
Sbjct: 250 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 309

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ ++ L++  YCR   +  A   L  M  R  +    +   +I   C       + 
Sbjct: 310 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK---DLS 366

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------- 318
            A +LLE+M   G KPNV  ++ LI G   +G  E+A RL                    
Sbjct: 367 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 426

Query: 319 --------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                         +L  ++    KP+  T+ A I GY K  KM  A    + M + GL+
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN   YT LI GH K GN   A  +   +   G  P++   +A I GL K GRVQEA ++
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +  ++ L  D  TY+ L+S   KQ E ++A  L   M   G+ P+I  Y  L+   C+
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              ++ + K F      GL P   TY++MI GY +  N++ A   F  M   G  P +  
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y AL+ G CK+  +++A   +  M+ KG +   ++  TL   YCK      A  + + + 
Sbjct: 667 YNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMI 725

Query: 605 KKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA 661
            K  +    T  T+I   C   ++  A L F ++  ++  VD V+  +L    Y  NK  
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL---MYGYNKLG 782

Query: 662 ----LFSDLSQRIAEGI 674
               +F+   + +A+G+
Sbjct: 783 QSSEVFALFEKMVAKGV 799



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 219/482 (45%), Gaps = 46/482 (9%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGL----PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ G++ E      EM ++GL    PL T  +N       + G +  A  +F  + 
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF----KAGNLMEALSIFRHLH 516

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A GV  D  +    +    + GRV EA +  S + ++G + D  T + LI+ FC    +G
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK---QG 573

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++AFEL +EM  KG  PN++ +  L+DGLCK G  ++A +LF  +      +P+  TY
Sbjct: 574 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTY 632

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPN----------------------------- 366
           + MI GYCK E +  A  L   M  +G+ P+                             
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 367 -----TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
                T ++ +LI G+CK    + A  L   M  +   P+   Y  +ID  CK G+++EA
Sbjct: 693 KGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 752

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L K+  +R L  D +TYT L+  + K  ++ +   LF +MV  G+ PD   Y  +I A
Sbjct: 753 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 812

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C++  + E+ K   E +  G+      +  +I    +  +++ A K    M ++G  P 
Sbjct: 813 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 872

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
                 L+    +  K+DEA + +E +   G+ P   T + L        DS  A  +++
Sbjct: 873 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 932

Query: 602 SL 603
            L
Sbjct: 933 QL 934



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 196/403 (48%), Gaps = 5/403 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR++E   +  E+   GL     T + ++   C+ G VE A E+ DEMC +G+  +   Y
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V   C+ G +  A +    M ++G   D+ T + +I  +C      ++ +AF L  E
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE---NVAEAFSLFHE 654

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG +P+ + +  L+ G CK+G  EKA  LF ++++         ++  +I GYCK  
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF--ATTLSFNTLIDGYCKSC 712

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  A  L + M  + ++P+  TYT++I  HCK G  E A  L   M +     +   Y 
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +++ G  K G+  E + L +K   + ++ D++TY +++  H K+    +A  L   +V  
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+      +  LI A C+++ + E+ K   E    GL P+    ++++  +   G +  A
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + F+ +  +G  PD  T   L++G    +  ++A    + ++
Sbjct: 893 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 235/472 (49%), Gaps = 12/472 (2%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+ G V  AE + +++   G+  D  +Y  M++ YCR   +  A    + M +
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   + AT + LI   C+ G    + +A + + EM R G  P V+T T  I  LC  G 
Sbjct: 292 EGCEPNAATYSTLINGLCNSG---RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR 348

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM-LLERMKEQGLLPNTNTY 370
            E A+++F+ + +    KPNV+TYT++ISG    ++++R  + L  RM   G++PNT TY
Sbjct: 349 IEDAWKIFIDM-KKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +L+    +    + A  + ++MGK GC PN  +YN +I G C  G  ++A  +L    +
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                  +TY I++  +    +T  A+ +   M   G  PD  +YT LI+ FC+  KM+ 
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   F E +  GL P + TYT++I GY +D  +  A +  +RM + GC P+  TY  LI 
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           GL KQ+    A +  + M+ + ISP  VT  T+    C  G    A+ +   + K     
Sbjct: 584 GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP 643

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            + T ++LI+ L  E RV  A   F +L  +    D V+   +   C  S K
Sbjct: 644 NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 232/463 (50%), Gaps = 7/463 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++++  + G +++  S++ ++  +G+   T T   ++   C    ++ A E+F+ M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +A++Y  ++   C  GRV EA  ++S M   G +    T T  I A CD    
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM--- 346

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I+ A+++  +M +KG KPNVYT+T LI G   +  +  A  LF ++ R D   PN  T
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSR-DGVVPNTVT 402

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+++   +  +++ A ++   M + G LPNT++Y  LI G+C +G+ E+A  ++  M 
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K   TP +  YN II G C  G    A  +L+       Q D+ +YT L+S   K ++ +
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A G+F  M+  GL P+   YT LI+ +C+ +K+  + +  +    +G  P  +TY  +I
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLI 582

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +  N S A +  + M +   +PD +TY  +I+GLC    +  A + +  M+  G  
Sbjct: 583 HGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           P   T  +L     ++G    A  +   L K+  I    T ++
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 209/426 (49%), Gaps = 36/426 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     GR+ E    + EMT +G+     T    +   C++G +E A ++F +M  +G
Sbjct: 304 LINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKG 363

Query: 219 VCADASSY----------KLMVVAYCRMGR-------VT------------EADRWL--- 246
              +  +Y          ++ +  + RM R       VT            E D  L   
Sbjct: 364 CKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           + M   G + + ++   LI  +C  G     ++A  +L  M++    P + T+ ++I G 
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIG---DTEKAMSMLTNMLKGRPTPTLVTYNIIIKGY 480

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G T+ A R+ L+L++++  +P+  +YT +ISG+CK  KM  A  +   M ++GL PN
Sbjct: 481 CDSGDTDVAIRV-LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPN 539

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TYT+LI G+CK    + A  +++ M + GC PN+  YN +I GL K+     A EL K
Sbjct: 540 EVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 599

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              + ++  D +TY+ +++          AL +F +MVK G  P++H Y++LI A  ++ 
Sbjct: 600 VMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEG 659

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +++E+E+ F E    GL P + TY  MI   +  G +  A  +   M   GC P   TY 
Sbjct: 660 RVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYD 719

Query: 547 ALISGL 552
            LI GL
Sbjct: 720 VLIKGL 725



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 222/500 (44%), Gaps = 29/500 (5%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M+ +G+   T T N ++ +  E   ++ A  VF+ M   G   + SSY  ++  YC +G 
Sbjct: 391 MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD 450

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
             +A   L+ ML         T  ++I  +CD G       A  +LE M   G +P+ ++
Sbjct: 451 TEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSG---DTDVAIRVLELMKANGCQPDEWS 507

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +T LI G CK    E A  +F +++      PN  TYTA+ISGYCK+EK++ A  +LERM
Sbjct: 508 YTELISGFCKISKMELASGMFNEMM-DRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           K  G  PN  TY  LI+G  K  NF  A +L  +M +E  +P++  Y+ +I+GLC  G +
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A E+  K  +     +  TY+ L+    ++   ++A  +F  + K GL PD   Y  +
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD---------GNISSAVKY 529
           I       K+  +  F  E I AG  PT +TY  +I G   +          N +S   +
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTF 746

Query: 530 -------------FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
                          ++ ++        Y AL+S L +  +  EA   Y SM+ +   P 
Sbjct: 747 DDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
           + T         +      AM + + +  +   L +     LI  LC   R   A   F 
Sbjct: 807 QDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFE 866

Query: 634 KLLGKDQNVDRVSLAALKNA 653
           K+L +  N D +    L N 
Sbjct: 867 KMLSRALNADEIVWTILING 886



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 10/279 (3%)

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + +N  +M  +R  + GL     TYT+L+    K+       D    + +EG  PN+  Y
Sbjct: 176 QALNYLDMFSQRGPKMGLF----TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N++I+ LCK G V++A  ++ K F+  ++ D  TYT ++  + +  +   A  +F RM +
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P+   Y+TLI   C   ++ E+  F  E    G+ PT  T+T+ I      G I  
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A K F  M + GC P+  TY +LISG   Q     A   +  M   G+ P  VT   L  
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMN 408

Query: 586 EYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCS 621
              +  +  +A+I+   + K   +    + N LIR  C+
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 115/250 (46%)

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I     K  + +A   L    QR  +    TYT LL +  K   T   +  + ++++ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           L P++  Y ++I A C+   ++++E    +   +G+ P   TYTSMI GY R+ ++ SA 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F RM++ GC P+  TY  LI+GLC   +++EA  F   M   G+ P   T        
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           C  G    A  I   + KK     V T    +  ++   MA   FH++       + V+ 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 648 AALKNACYES 657
            AL N   E+
Sbjct: 404 NALMNVLMEN 413



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 130/310 (41%), Gaps = 24/310 (7%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + V+   C  G +  A E+F++M   G   +  +Y  ++ A  + GRV EA+   S +
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +G I D  T   +I         G + +AF+ L EM+  G +P + T+ VLI GL  +
Sbjct: 672 KKQGLIPDEVTYVKMIEVCV---MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728

Query: 310 GWTEKAFRLF---------LKLVRSD------------NYKPNVHTYTAMISGYCKEEKM 348
               K   L           +++  D            +++ +   Y A++S   +  + 
Sbjct: 729 MVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRW 788

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L   M  Q   PN +TY   +    +    + A D+   M  + C  ++  Y  +
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I  LC+  R +EA  + +K   R L AD+I +TIL++  L        +     M     
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRR 908

Query: 469 NPDIHAYTTL 478
           NP  HA T L
Sbjct: 909 NPSSHARTIL 918



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 159/385 (41%), Gaps = 26/385 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F +I +++    M  EM + GL     T   ++   C+   ++ A  + + M   G
Sbjct: 511 LISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++    +    + A+     ML+     D  T + +I   C+ G   +I 
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG---AIP 627

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+  +MV+ G  PN++T++ LI  L ++G  E+A  +F +L +     P+  TY  M
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL-KKQGLIPDEVTYVKM 686

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG---------------HCKVGNF 383
           I       K++RA   L  M   G  P   TY  LI G                     F
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTF 746

Query: 384 ERAY---DLMDLMGKEGCTPNI----YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +      D++ ++  +    +       Y+A++  L + GR  EA  L +    +    +
Sbjct: 747 DDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           + TY   L   L+  +   A+ +F  M        +  Y  LI   C+  + KE+   F+
Sbjct: 807 QDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFE 866

Query: 497 EAITAGLFPTKETYTSMICGYLRDG 521
           + ++  L   +  +T +I G L  G
Sbjct: 867 KMLSRALNADEIVWTILINGLLGAG 891


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 263/556 (47%), Gaps = 32/556 (5%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTN---NGLPLIT-STLNRVVGIA 198
           L+  G F +AH+V   M     +IG   + ++  I M +    G P      LN + G  
Sbjct: 121 LVEYGYFSQAHKVYMRM----KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG 176

Query: 199 CELGLVEY---------------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           CE   V Y               A  +FDEM  +G+C D  ++  ++   C+ G V E++
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +  S ++ RG   +  T  + I   C KG   +I +A  LLE +V +G  P+V ++  LI
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCRKG---AIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            G CK     +A     K+V S   +PN  TY  +I+G+CK   M  A+ +L     +G 
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P+  TY+SLI G C  G+  RA  +     ++G   +I  YN ++ GL K+G V +A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+K   +     D  TY ++++   K      A G+    +  G  PDI  + TLI  +C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +Q+ M ++ +     ++ G+ P   TY +++ G  +   + + V  F+ M + GC P+ I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI   CK  K+ EA + ++ M  +G++P  VT  TL    C  G+   A  +  ++
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592

Query: 604 DKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
           +K+          N +I   C +  V MA   FHK+ G D   D  +   + ++ C   N
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652

Query: 659 KYALFSDLSQRIAEGI 674
                + L + I++G+
Sbjct: 653 IDLAHTFLLENISKGL 668



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 250/562 (44%), Gaps = 86/562 (15%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV-VGIACELGL---V 204
           F+   E  +CM+      G+ +    ++ EM  N   + +  L  V +GI  + G    V
Sbjct: 36  FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN---VDSKMLEGVYIGIMRDYGRKGKV 92

Query: 205 EYAEEVFDEM----CAR-------------------------------GVCADASSYKLM 229
           + A  VF+ M    C                                 G+  D  ++ + 
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 230 VVAYCRMGRVTEADRWLS-----------------------------------AMLDRGA 254
           + ++C  GR T A R L+                                    ML +G 
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D  T   LI   C K   G+++++ +L  +++++G  PN++T  + I GLC+KG  ++
Sbjct: 213 CPDILTFNKLIHVLCKK---GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A RL   +V S+   P+V +Y  +I G+CK  K+  AE  L +M   G+ PN  TY ++I
Sbjct: 270 AARLLESIV-SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 375 YGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            G CK G  + A  ++ D M K G  P+ + Y+++I+GLC  G +  A  +  +A ++  
Sbjct: 329 NGFCKAGMMQNADKILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +   I Y  L+    KQ    QAL L   M++ G +PDI  Y  ++   C+   + ++  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              +AI  G  P   T+ ++I GY +  N+  A++    M   G  PD ITY  L++GLC
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IR 610
           K  KLD     +++M+ KG +P  +T   L   +CK    + AM + + +  +     I 
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 611 TVNTLIRKLCSEKRVGMAALFF 632
           T+ TLI  LCS   +  A   F
Sbjct: 568 TLCTLICGLCSNGELDKAYELF 589



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 215/477 (45%), Gaps = 40/477 (8%)

Query: 167 GRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G + E   ++  + + GL P + S    + G      LVE AE    +M   GV  +  +
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE-AECYLHKMVNSGVEPNEFT 323

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC---------------- 269
           Y  ++  +C+ G +  AD+ L   + +G I D  T + LI   C                
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 270 DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           +KGF+                G + QA +L+++M+  G  P+++T+ ++++GLCK G   
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +    + +    P++ T+  +I GYCK+  M++A  +L+ M   G+ P+  TY +L
Sbjct: 444 DANGILNDAI-AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G CK    +   D    M ++GCTPNI  YN +I+  CK  +V EA EL K+   R L
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESE 492
             D +T   L+       E  +A  LF  + K    +     +  +I AFC +  +  +E
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K F +   +   P   TY  MI  Y + GNI  A  +       G  P   T G +++ L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           C   +L EA      M+  GI P EV  +  A     + + A   I++E L KK  I
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEEVNSIFEA----DKKEVAAPKIVVEYLLKKSHI 735



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 3/351 (0%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K  + T+  +I+ L   G  E    +  ++ ++ + K     Y  ++  Y ++ K+  
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  + ERM      P+  +Y +++    + G F +A+ +   M   G  P++Y +   + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             C  GR   A  LL     +  + + ++Y  ++S   K+    +A  LF  M+K G+ P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           DI  +  LI   C++  ++ESEK F + +  G+ P   T+   I G  R G I  A +  
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + +   G  PD I+Y  LI G CK SKL EA  +   M+  G+ P E T  T+   +CK 
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           G    A  IL     K +I    T ++LI  LC++  +  A   F++ + K
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 158/353 (44%), Gaps = 19/353 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM-- 159
           +++  L N+     A++ FY A+    F+H + LY      L   G   +A ++M+ M  
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 160 -------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                        V+   ++G L +   ++ +    G      T N ++   C+   ++ 
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ D M + G+  D  +Y  ++   C+  ++        AML++G   +  T  +LI 
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           +FC       + +A EL +EM  +G  P++ T   LI GLC  G  +KA+ LF+ + +  
Sbjct: 540 SFCKDR---KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            +  +   +  MI+ +C +  ++ AE L  +M      P+  TY  +I  +CK GN + A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +  +     +G  P+      +++ LC   R+ EA  ++    Q  +  +++ 
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 260/531 (48%), Gaps = 40/531 (7%)

Query: 126 FAKFRHFM----RLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTN 181
           F K R F+    R Y V    L       +A+EV++           +++G S+  ++  
Sbjct: 30  FEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLK----------EMRDGKSVAPDLV- 78

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVT 240
                   T + V+   C+ G ++ A E+  EM  R G+  D  +Y  +V   CR G++ 
Sbjct: 79  --------TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTH 299
            A   +  M  +G   D  T + LIT +C+      + +A +L +E++    WKP+V T+
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNAR---KVDEALKLYKEILTSSSWKPDVVTY 187

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T LIDG CK G  EKA ++ L ++      PNV TY++++ G CK   +++A  L  RM 
Sbjct: 188 TALIDGFCKSGNLEKAMKM-LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G +PN  TYT+LI+G C     + A  LMD M    C P+  +YNA++DG C+ GR++
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM-VKAGLNPDIHAYTTL 478
           EA +L K+   +    D+ITYT L+      +  ++A  L   M   AG++PD+  Y+ +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +A + R K+  E+ +F QE I   + P   TY+S+I G  + G +  A++  + M     
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P   T+ ++I  LC+   +DEA +   +M   G+ P  VT  TL   + + G    A  
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486

Query: 599 ILESLDKKLWI----------RTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           + E + KK             +  + LIR LC  + +  A     +L  ++
Sbjct: 487 LFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRE 537



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 180/349 (51%), Gaps = 8/349 (2%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +P V T T++IDG CK    ++A   F K+   +   PN  TY  +++G CK    ++A 
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 353 MLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIID 410
            +L+ M++ + + P+  TY+++I G CK G  +RA +++ +++ ++G  P++  Y +++D
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV-KAGLN 469
           GLC+ G++  A E++++   + ++ DK T++ L++      +  +AL L+  ++  +   
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  YT LI  FC+   ++++ K           P   TY+S++ G  + G++  A+  
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F+RM   GC P+ +TY  LI GLC   K+D A    + M      P  V+   L   YC+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
            G    A  + + +  K  +    T   L+R  C+  R+  A      +
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 167/328 (50%), Gaps = 7/328 (2%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P V T+T +I G+CK  ++ +A    E+M+E  + PN  TY  ++ G CK     +AY+
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 389 LM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSE 446
           ++ ++   +   P++  Y+ +I+G CK+G +  A E+L++   R+ +  D +TYT ++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-P 505
             +  +  +A  +   M   G+ PD   ++ LI  +C  +K+ E+ K ++E +T+  + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT++I G+ + GN+  A+K    M    C P+ +TY +L+ GLCK   LD+A   +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
             M  KG  P  VT  TL +  C       A ++++ +          + N L+   C  
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            R+  A   F ++  K    DR++   L
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCL 330



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G L++   M+  M          T + ++   C+ G ++ A ++F  M ++G
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C   +V  A   +  M       D  +   L+  +C     G I+
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR---LGRIE 306

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM  K   P+  T+T L+ G C     E+A  L   +  +    P+V TY+ +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GY + ++   A   ++ M  + + PN  TY+SLI G CK G  + A +++  M  +  
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  +N++I  LC+ G + EA++LL       L+   +TYT LL    +    + A  
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486

Query: 459 LFCRM--------VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
           LF  M          A L P+  A++ LI   C+ +++ ++    +E  +    P +E  
Sbjct: 487 LFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 545

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIG 537
            +++ G LR G    A K    ++++G
Sbjct: 546 LAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 9/248 (3%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA-DKITYTILLSEHLKQAETKQA 456
           C P +  +  IIDG CK  ++++A    +K   RE  A ++ TY ++++   K   T +A
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEK--MREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 457 LGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT-AGLFPTKETYTSMI 514
             +   M     + PD+  Y+T+I  FC+Q +M  + +  +E +T  G+ P   TYTS++
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY-ESMIGKGI 573
            G  RDG +  A +  + M   G  PD  T+ ALI+G C   K+DEA + Y E +     
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAAL 630
            P  VT   L   +CK G+   AM +L  ++ +  +  V T   L+  LC    +  A  
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 631 FFHKLLGK 638
            F ++  K
Sbjct: 241 LFRRMTSK 248


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 229/477 (48%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++  +G+++EG  ++ +M   G      T + V+   C  G V+ A E+   M  +G
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  ++  +CR  R TE    L  M   G   D+   T LI  F     +  I 
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK---QSDIG 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF++ EEM  +  K N +T+  LI GLCK G  EKA  LF ++      KP++ TY  +
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM-GIKPDIQTYNCL 413

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K + M +A  LL  +K++ L  N     +++ G C  G+  RA +L   M   G 
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  Y  I+ GL K+GR +EA ++L     + L  D   Y  ++    K  + ++   
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M+  GL P+++ Y   I  +CR  +M+ +E+ F E + +G+ P     T +I GY 
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +DGN + A   F+ M   G  PD  T+  LI GL K  KL EA   +  ++ KG+ P   
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
           T  +L    CK+GD   A  + + + KK     I T N LI  LC    +  A   F
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 234/486 (48%), Gaps = 7/486 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   ++   C +G VE  + V  +M  +G   +  +Y +++   CR G V EA     +M
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            ++G + DN     LI  FC +      K    +L+EM   G KP+   +T LI+G  K+
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKS---MLDEMYTMGLKPDHVAYTALINGFVKQ 350

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                AF++  ++  +   K N  TY A+I G CK   + +AE L   M   G+ P+  T
Sbjct: 351 SDIGGAFQVKEEMF-ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y  LI G+ KV N E+AY+L+  + KE  T N Y   AI++GLC  G +  A EL ++  
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              L+ + + YT ++   +K+   ++A+ +   M   GL+PD+  Y T+I  FC+  KM+
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E + +  E I  GL P   TY + I GY R G + +A + F  M   G AP+++    LI
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLW 608
            G CK     +A   +  M+ +G+ P   T   L +   K G    AM +  E LDK L 
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649

Query: 609 --IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
             + T  +LI  LC E  +  A      +  K  N + V+  AL N   +  + A   +L
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 667 SQRIAE 672
              I E
Sbjct: 710 FDGIPE 715



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 239/510 (46%), Gaps = 26/510 (5%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEM 179
           +Y      L+  G FE A +++  M               +  F + G+++EG S ++EM
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM 538

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
              GL     T    +   C  G ++ AE  F EM   G+  +      ++  YC+ G  
Sbjct: 539 IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNT 598

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
           T+A      MLD+G + D  T ++LI         G +++A  +  E++ KG  P+V+T+
Sbjct: 599 TKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK---NGKLQEAMGVFSELLDKGLVPDVFTY 655

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T LI  LCK+G  + AF L   + +     PN+ TY A+I+G CK  ++ +A  L + + 
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKK-GINPNIVTYNALINGLCKLGEIAKARELFDGIP 714

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           E+GL  N+ TY+++I G+CK  N   A+ L   M   G  P+ + Y A+IDG CK G  +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  L     +  + A    +  L+    K  +  +A  L   MV   + P+   YT LI
Sbjct: 775 KALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C    +KE+E+ F E     + P   TYTS++ GY R G  S     F  M   G  
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD++ +  ++    K+    +A +  + M+ +G++ C+     L    CK  + +  + +
Sbjct: 894 PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953

Query: 600 LESLDK---KLWIRTVNTLIRKLCSEKRVG 626
           L+ ++K   KL + T  TL+   C   R G
Sbjct: 954 LDEVEKQGSKLSLATCGTLV---CCFHRAG 980



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 248/525 (47%), Gaps = 9/525 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +   C++  + ++  +++ + ++IE+    L         +V   C  G +  A E+F E
Sbjct: 408 QTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M + G+  +   Y  +V    + GR  EA + L  M D+G   D      +I  FC    
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA-- 525

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G +++    L EM+ KG KPNVYT+   I G C+ G  + A R F++++ S    PN  
Sbjct: 526 -GKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPNDV 583

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
             T +I GYCK+    +A      M +QG+LP+  T++ LI+G  K G  + A  +   +
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P+++ Y ++I  LCK+G ++ A+EL     ++ +  + +TY  L++   K  E 
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  LF  + + GL  +   Y+T+IA +C+   + E+ + F      G+ P    Y ++
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  + GN   A+  F  M + G A     + ALI G  K  KL EA Q  E M+   I
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG-MAALF- 631
           +P  VT   L   +C  G+   A  +   + K+  +  V T    L    R+G  + +F 
Sbjct: 823 TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFS 882

Query: 632 -FHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            F +++ +    D ++ + + +A   E N       +   ++EG+
Sbjct: 883 LFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 4/445 (0%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++ F +   +   F +  EM    + L T T   ++   C++G +E AE++F 
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM   G+  D  +Y  ++  Y ++  + +A   L  +       +      ++   C   
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLC--- 453

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A EL +EM+  G KPN+  +T ++ GL K+G  E+A ++ L +++     P+V
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKI-LGVMKDQGLSPDV 512

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I G+CK  KM   +  L  M  +GL PN  TY + I+G+C+ G  + A      
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  PN      +IDG CK G   +A+   +    + +  D  T+++L+    K  +
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A+G+F  ++  GL PD+  YT+LI+  C++  +K + +   +    G+ P   TY +
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNA 692

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G I+ A + F  + + G A +++TY  +I+G CK + L EA Q +  M   G
Sbjct: 693 LINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG 752

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAM 597
           + P       L    CK G++  A+
Sbjct: 753 VPPDSFVYCALIDGCCKAGNTEKAL 777



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 185/375 (49%), Gaps = 5/375 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++ G+L+E   +  E+ + GL     T   ++   C+ G ++ A E+ D+MC +G
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C++G + +A      + ++G   ++ T + +I  +C      ++ 
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA---NLT 739

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+L   M   G  P+ + +  LIDG CK G TEKA  LFL +V       +   + A+
Sbjct: 740 EAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG--IASTPAFNAL 797

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K  K+  A  L+E M +  + PN  TYT LI  HC VGN + A  L   M K   
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV 857

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y +++ G  + GR  E + L  +   R ++ D + +++++  HLK+    +AL 
Sbjct: 858 MPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALK 917

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+  G+N   + YT LI A C+   + E  K   E    G   +  T  +++C + 
Sbjct: 918 LVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFH 977

Query: 519 RDGNISSAVKYFQRM 533
           R G    A++  + M
Sbjct: 978 RAGRTDEALRVLESM 992



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 75/386 (19%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V+TYT +I+ YC+  K+   + +L  M+E+G +PN  TY+ +I G C+ G+ + A +L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M  +G  P+ Y Y  +IDG C++ R  E   +L + +   L+ D + YT L++  +K
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 450 QAET-----------------------------------KQALGLFCRMVKAGLNPDIHA 474
           Q++                                    ++A  LF  M   G+ PDI  
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 475 YTTLIAAFCRQKKMKE-----------------------------------SEKFFQEAI 499
           Y  LI  + + + M++                                   + + FQE I
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           + GL P    YT+++ G +++G    A+K    M   G +PD   Y  +I G CK  K++
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLI 616
           E   +   MI KG+ P   T     + YC+ G+  A     +E LD  +    V    LI
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNV 642
              C +     A   F  +L  DQ V
Sbjct: 590 DGYCKDGNTTKAFAKFRCML--DQGV 613



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 32/342 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+  + G LK  F +  +M   G+     T N ++   C+LG +  A E+FD +  +G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  ++ +Y  ++  YC+   +TEA +    M   G   D+     LI   C  G      
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777

Query: 273 ------------------------FR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
                                   F+ G + +A++L+E+MV     PN  T+T+LI+  C
Sbjct: 778 SLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHC 837

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
             G  ++A +LF+++ +  N  PNV TYT+++ GY +  + +    L + M  +G+ P+ 
Sbjct: 838 TVGNIKEAEQLFMEMQKR-NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDD 896

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             ++ ++  H K GN+ +A  L+D M  EG       Y  +ID LCK   + E  ++L +
Sbjct: 897 LAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDE 956

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             ++  +    T   L+    +   T +AL +   MV++ LN
Sbjct: 957 VEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLN 998



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 33/313 (10%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI------SGY 342
           R  +  N+ T ++L   LC  G    A  +  +++ + N  P+V    ++I      +G 
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRN--PHVKILDSIIKCYKEINGS 157

Query: 343 CKEEKMNRAEMLLERMKEQGLL---------PNTNTYT-----------SLIYGHCKVGN 382
                +   E+L++  +++G L           TN +             L+ G+ +V  
Sbjct: 158 SSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGN-RVEL 216

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F + Y  M  +G     P++Y Y  +I+  C+ G+V+E   +L    ++    + +TY++
Sbjct: 217 FWKVYKGM--LG--AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSV 272

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++   +  +  +AL L   M   GL PD + Y TLI  FCRQK+  E +    E  T G
Sbjct: 273 VIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG 332

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P    YT++I G+++  +I  A +  + M       +  TY ALI GLCK   L++A 
Sbjct: 333 LKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAE 392

Query: 563 QFYESMIGKGISP 575
             +  M   GI P
Sbjct: 393 DLFSEMTMMGIKP 405


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 245/518 (47%), Gaps = 74/518 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++    G  KEG  ++ EM   G      T N V+G  C  G V+ A E+   M  +G
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y +++  + +  R TEA   L  M  +G    +   T LI  F  +G  G   
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSG--- 358

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF + EEM+ +G K N++T+  L+ G+CK G  EKA  L  +++     KP+  TY  M
Sbjct: 359 EAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV-GIKPDTQTYNNM 417

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLP--------------------------------- 365
           I GY KE+  +R + LL  MK+  L+P                                 
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 366 --NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N   YT+LI GH + G F+ A  ++ +M K+G  P++  YN++I GLCK  +++EA +
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 424 LLKKAFQRELQADKITY-----------------------------------TILLSEHL 448
            L +  +R L+ +  TY                                   T L+  + 
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+  T +A  +F  M+   ++PD+  Y+ LI    R  K++ + +   E +  GL P   
Sbjct: 598 KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY S+I G+ + G I  A +  + M Q G +P+ ITY ALI+GLCK  +++ A + ++ +
Sbjct: 658 TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            GKG++   VT  T+   YCK G+ + A  + + +  K
Sbjct: 718 PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK 755



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 243/575 (42%), Gaps = 78/575 (13%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++  F   G   E F +  EM   G+ L   T N +V   C+ G +E A+ + 
Sbjct: 340 GHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALL 399

Query: 212 DEMCARGVCADASSYKLMVVAY-----------------------------------CRM 236
           +EM   G+  D  +Y  M+  Y                                   CR 
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH 459

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G + +A R    M+  G   +    T LI     +G     ++A  +L+ M +KG +P+V
Sbjct: 460 GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEG---RFQEAVRILKVMDKKGVQPDV 516

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             +  +I GLCK    E+A    ++++     KPNV+TY A+I GYCK  +M  A+   +
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIER-GLKPNVYTYGALIHGYCKSGEMQVADRYFK 575

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G+ PN    T+LI G+CK G+   A  +   M      P++  Y+A+I GL + G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNG 635

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++Q A ELL +  ++ L  D  TY  ++S   KQ    +A  L   M + G++P+I  Y 
Sbjct: 636 KLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYN 695

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI   C+  +++ + + F      GL     TY ++I GY + GN+S A + F  M   
Sbjct: 696 ALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK 755

Query: 537 GCAPDNITYGALI----------------------------------SGLCKQSKLDEAC 562
           G  PD+  Y ALI                                   G CK  K+ EA 
Sbjct: 756 GVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEAN 815

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC-- 620
           Q  E M+ K + P  VT   L   +CK G    A      + K+  +    T    L   
Sbjct: 816 QLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY 875

Query: 621 --SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             + +R  M AL F +++ KD   D V+ + + +A
Sbjct: 876 NMAGRRSEMFAL-FDEMIAKDIEPDGVTWSVMIDA 909



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 239/550 (43%), Gaps = 82/550 (14%)

Query: 141  TSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLP 185
              L  +G+ E A  V + MVS                  + GR +E   ++  M   G+ 
Sbjct: 454  NGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQ 513

Query: 186  LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
                  N V+   C+   +E A++   EM  RG+  +  +Y  ++  YC+ G +  ADR+
Sbjct: 514  PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 246  LSAMLDRGAILDNATLTLLITAFCDKG--------FR----------------------- 274
               ML  G   ++   T LI  +C +G        FR                       
Sbjct: 574  FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 275  -GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             G ++ A ELL E + KG  P+V+T+  +I G CK+G   KAF+L   + +     PN+ 
Sbjct: 634  NGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK-GISPNII 692

Query: 334  TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            TY A+I+G CK  ++ RA  L + +  +GL  N  TY ++I G+CK GN  +A+ L D M
Sbjct: 693  TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 394  GKEGCTPNIYAY----------------------------------NAIIDGLCKKGRVQ 419
              +G  P+ + Y                                  NA++DG CK G+V 
Sbjct: 753  TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812

Query: 420  EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            EA +LL+    + ++ D +TYTIL+  H K    K+A   F  M K  L P+   YT L+
Sbjct: 813  EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872

Query: 480  AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            + +    +  E    F E I   + P   T++ MI  +L++G+    +K    M + G  
Sbjct: 873  SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932

Query: 540  PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
                    LI  LC++  + E  +  E +  +G++    T  TL   + K G    A  +
Sbjct: 933  VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992

Query: 600  LESLDKKLWI 609
            L+S+ +  W+
Sbjct: 993  LKSMVRFKWV 1002



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 215/420 (51%), Gaps = 9/420 (2%)

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
           R+ + ML+   + D  T T LI A     FR G+ K+   LL EM  KG  P++ T+ V+
Sbjct: 222 RFYNGMLEANVLHDVYTYTHLINAH----FRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I GLC+ G  ++AF L  KL+       +V TY+ +I G+ K+++   A+++LE M  +G
Sbjct: 278 IGGLCRAGEVDEAFEL-KKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG 336

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L P    YT+LI G  + G+   A+ + + M   G   N++ YNA++ G+CK G +++A 
Sbjct: 337 LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            LL +     ++ D  TY  ++  +LK+  T +   L   M K+ L P  +    +I   
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR   ++++ + F+  ++ G+ P    YT++I G++++G    AV+  + M++ G  PD 
Sbjct: 457 CRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILE 601
           + Y ++I GLCK  K++EA  +   MI +G+ P   T   L + YCK G+   A     E
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576

Query: 602 SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            L   +    V    LI   C E     A   F  +LG+  + D  + +AL +    + K
Sbjct: 577 MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGK 636



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 5/402 (1%)

Query: 167  GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
            G+L+    ++ E    GL     T N ++   C+ G +  A ++ + MC +G+  +  +Y
Sbjct: 635  GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITY 694

Query: 227  KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
              ++   C+ G +  A      +  +G   +  T   +I  +C  G   ++ +AF L +E
Sbjct: 695  NALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG---NLSKAFRLFDE 751

Query: 287  MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            M  KG  P+ + ++ LIDG  K+G TEKA  LFL+ V+      +  +  A++ G+CK  
Sbjct: 752  MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF--ASTSSLNALMDGFCKSG 809

Query: 347  KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            K+  A  LLE M ++ + P+  TYT LI  HCK G  + A      M K    PN   Y 
Sbjct: 810  KVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYT 869

Query: 407  AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            A++ G    GR  E + L  +   ++++ D +T+++++  HLK+ +  + L L   M+K 
Sbjct: 870  ALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK 929

Query: 467  GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            G N   +    LI   CR++ + E  K  ++    GL  +  T ++++  + + G +  A
Sbjct: 930  GGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGA 989

Query: 527  VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
             +  + M +    PD+     LI+     +  + A  F + M
Sbjct: 990  ARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 171/595 (28%), Positives = 276/595 (46%), Gaps = 44/595 (7%)

Query: 78  HLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIG--FAKFR----- 130
           +LR  P +L L   + S    QA + +  L ++  S + L F  WA    F  F+     
Sbjct: 30  YLRRHPEQLTL---LSSHFTPQASSNLL-LKSQFDSSLVLKFLDWARSQQFFSFQCKCLA 85

Query: 131 -HFMRLYIVCATS------LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG 183
            H +  Y +  T+      ++ N   E   ++ QC+ +S+ +       F +V++     
Sbjct: 86  LHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK----- 140

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR-VTEA 242
                 +  RV  I   L +V  A+       + G      SY  ++ A  R  + V  A
Sbjct: 141 ------SCARVNLINKALSIVNLAK-------SYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
           +     M++ G   +  T  +LI  FC  G   +++       EM R G  PNV T+  +
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAG---NLEMGLXFFGEMERNGCLPNVVTYNTI 244

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ID  CK     +AF+L L+L+      PN+ +Y  +I+G C+E +M     +LE M ++ 
Sbjct: 245 IDAYCKLRKIGEAFKL-LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            +P+  T+ +LI G+C VGNF +A  L   M K G +PN+  Y  +I+ +CK G +  A 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E L +   R L  +  TYT L+    +Q   KQA  +   MV+ G  P I  Y  LI   
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   +M+++    QE I  G  P   +Y+++I G+ R+  +  A +    M   G +PD 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY +LI GLCKQ +L E C  ++ M+  G+ P EVT  +L   YC +GD   A+ + + 
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + +K +   I T N LI     + R   A     KLL ++   + ++   L + C
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 232/469 (49%), Gaps = 54/469 (11%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  +G+     T N ++   C  G +E     F EM   G   +  +Y  ++ AYC++ 
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++ EA + L  M  +G   +  +  ++I   C +G    +K+  E+LEEM ++ + P+  
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG---QMKETSEILEEMSKRRYVPDRV 309

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T   LI+G C  G   +A  L  ++V+ +   PNV TYT +I+  CK   +NRA   L++
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVK-NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+++GL PN  TYT+LI G  + G  ++AY +M  M + G TP I  YNA+I+G C  GR
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +++A  LL++  +R    D ++Y+ ++S   +  E ++A  L   MV  G++PD+  Y++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+Q+++ E    FQE ++ GL P + TYTS+I  Y  +G++  A++    M Q G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 538 CAPDNITYGALISGLCKQS----------------------------------------- 556
            +PD +TY  LI+G  KQS                                         
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 557 ---------KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
                     ++EA +  ESM+ KG    E     + + + K G+   A
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 200/386 (51%), Gaps = 4/386 (1%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +A  ++      G+ P V ++  ++D + +   + K      K +      PNV+TY 
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+C    +         M+  G LPN  TY ++I  +CK+     A+ L+ LM  +
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PN+ +YN +I+GLC++G+++E  E+L++  +R    D++T+  L++ +       QA
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L   MVK GL+P++  YTTLI + C+   +  + +F  +    GL P   TYT++I G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + + G +  A +  + M + G  P  ITY ALI+G C   ++++A    + MI +G  P 
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 577 EVTRVTLAYEYCKQGDSATAM-IILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFH 633
            V+  T+   +C+  +   A  + +E + K +   + T ++LI+ LC ++R+G     F 
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 634 KLLGKDQNVDRVSLAALKNA-CYESN 658
           ++L      D V+  +L NA C E +
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGD 533



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 225/476 (47%), Gaps = 58/476 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++ ++ E F ++  M   GL     + N V+   C  G ++   E+ +EM  R 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC +G   +A    + M+  G   +  T T LI + C  G   ++ 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG---NLN 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E L++M  +G  PN  T+T LIDG  ++G+ ++A+++  ++V  + + P + TY A+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE-NGFTPTIITYNAL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C   +M  A  LL+ M E+G +P+  +Y+++I G C+    E+A+ L   M  +G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  Y+++I GLCK+ R+ E  +L ++     L  D++TYT L++ +  + +  +AL 
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKK------------------------------- 487
           L   M++ G +PDI  Y  LI  F +Q +                               
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 488 -------------------MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                              M E+++  +  +  G    +E Y  +I G+ + GNI  A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            ++ M   G AP ++T  AL   L  + K  E  Q    ++   +  C +T   LA
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQ----LLDYTLKSCRITEAALA 711



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 171/403 (42%), Gaps = 73/403 (18%)

Query: 137 IVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +V  T+LI++    GN  RA E +  M               +  F++ G LK+ + ++ 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR-- 235
           EM  NG      T N ++   C LG +E A  +  EM  RG   D  SY  ++  +CR  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 236 ---------------------------------MGRVTEADRWLSAMLDRGAILDNATLT 262
                                              R+ E       ML  G   D  T T
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI A+C     G + +A  L +EM++KG+ P++ T+ VLI+G  K+  T++A RL LKL
Sbjct: 523 SLINAYC---IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579

Query: 323 VRSDNYKPNVHTYT---------------AMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           +  ++  PN  TY                A++ G+C +  MN A+ +LE M ++G   N 
Sbjct: 580 LYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNE 638

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             Y  +I+GH KVGN E+AY+L   M   G  P+     A+   L  +G+  E  +LL  
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDY 698

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +     +     +L+  + K+        +   M  +GL P
Sbjct: 699 TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 260/553 (47%), Gaps = 40/553 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G++ E   MV EMT  G+    +T   +V   C  G V+ A+E+F +M  RG
Sbjct: 16  IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++   C+   +  A + L  M  +G   DN T   +++  C  G     K
Sbjct: 76  CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135

Query: 279 QAFE----------------LLEEMVRKG-----W-------------KPNVYTHTVLID 304
           Q F+                LL+ + ++G     W              P++ T+  LID
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C+   T++A +LF K V +  Y P+  TY +++ G  ++  M+ AE + ++M + G  
Sbjct: 196 GFCRVEKTDEAMKLF-KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCA 254

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY+ ++ GHC+VGN  R  +L + M ++  +P++   NA+ID LCK  +V +A+++
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV 314

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L++  +     D +TY ILL    K     +A  LF  MV  G  PDI +Y+ ++   C+
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             K+ ++   F   I   L P   T+  ++ G  + G +  A      M++    PD +T
Sbjct: 375 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVT 434

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
              L+ GLC+  + DEA + ++ M+ KG     +    +    C++G  A A++  +S+ 
Sbjct: 435 CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMV 494

Query: 605 KKLW-----IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           K        + T  TL+  L    RV  A  +F ++ G     D V+   L N   +  +
Sbjct: 495 KSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554

Query: 660 YALFSDLSQRIAE 672
           +     L+Q + E
Sbjct: 555 HIQADRLTQAMKE 567



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 229/470 (48%), Gaps = 9/470 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   G      T + ++   C+ G V  A E+ +EM  +GV  D ++Y ++V   CR G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V EAD     M++RG   +      LI   C      +I++A++LLEEM  KG++P+  T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKD---ENIERAYKLLEEMASKGYEPDNIT 117

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  ++ GLC+ G   +A + F   + S  Y P+V  Y  ++    KE K+  A  L + M
Sbjct: 118 YNTILSGLCRMGKVSEA-KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176

Query: 359 K--EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
              ++ + P+  TY +LI G C+V   + A  L   +  +G  P+   YN+I+ GL +K 
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            + EA E+ KK        +  TY+I+LS H +     + L L+  M +   +PD+    
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I   C+ KK+ ++ K  +E    G  P   TY  ++ G  +   +  A + F  M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GCAPD ++Y  +++GLCK +K+ +A   ++ MI + + P  VT   L    CK G    A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 597 MIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             +L+ + +   +    T  TL+  LC +KR   A   F  ++ K    D
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 233/489 (47%), Gaps = 41/489 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +   ++  + ++ EM + G      T N ++   C +G V  A++ FD M +RG
Sbjct: 86  LINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 145

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRW----LSAMLDRGAILDNATLTLLITAFCD---- 270
              D  +Y  ++ A  + G+V EA  W       M DR    D  T   LI  FC     
Sbjct: 146 YSPDVVAYNGLLDALYKEGKVAEA--WGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKT 203

Query: 271 ------------KGF----------------RGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                       KG+                + ++ +A E+ ++MV  G  PN  T++++
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIV 263

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           + G C+ G   +   L+ ++     + P+V    A+I   CK +K++ A  +LE M + G
Sbjct: 264 LSGHCRVGNMARCLELYEEMTEK-RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            +P+  TY  L+ G CK    ++A++L   M   GC P+I +Y+ +++GLCK  +V +A 
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L  +  +R+L  D +T+ IL+    K  +  +A  L   M +  + PD    TTL+   
Sbjct: 383 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGL 442

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC--AP 540
           CR K+  E+ + FQ  +  G       +  ++ G  R+G ++ A+ +F+ M +     +P
Sbjct: 443 CRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSP 502

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D +TY  L++ L +  ++D+A  +++ M G G +P  V   TL     KQG    A  + 
Sbjct: 503 DVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLT 562

Query: 601 ESLDKKLWI 609
           +++ +K ++
Sbjct: 563 QAMKEKGFL 571



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 213/415 (51%), Gaps = 9/415 (2%)

Query: 167 GRLKEGFSM--VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           G++ E + +   ++M +  +     T N ++   C +   + A ++F ++ A+G   D  
Sbjct: 164 GKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV 223

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  +++   R   + EA+     M+D G   + AT +++++  C     G++ +  EL 
Sbjct: 224 TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHC---RVGNMARCLELY 280

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           EEM  K + P+V     +ID LCK    + A ++  ++ +     P+V TY  ++ G CK
Sbjct: 281 EEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI-GAVPDVVTYNILLDGLCK 339

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              +++A  L   M + G  P+  +Y+ ++ G CK      A  L D M +    P++  
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N ++DGLCK G++ EA +LL    +  +  D +T T L+    +   T +A+ LF  MV
Sbjct: 400 FNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMV 459

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-GLF-PTKETYTSMICGYLRDGN 522
           + G   D+  +  ++A  CR+ K+ ++  FF+  + + G F P   TYT+++   +  G 
Sbjct: 460 EKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGR 519

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG-ISPC 576
           +  AV YFQ+M   GCAPD + Y  L++GL KQ +  +A +  ++M  KG +S C
Sbjct: 520 VDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 177/386 (45%), Gaps = 44/386 (11%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           ++P+V TY+ +ISG CK  K+  A  ++E M E+G+ P+  TYT ++   C+ G  + A 
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L   M + GC+ N  AYNA+I+GLCK   ++ AY+LL++   +  + D ITY  +LS  
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHA--------------------------------- 474
            +  +  +A   F  M   G +PD+ A                                 
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 475 ----YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
               Y TLI  FCR +K  E+ K F++ I  G  P   TY S++ G  R  N+  A + F
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++M   GCAP+  TY  ++SG C+   +    + YE M  K  SP  +    +    CK 
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305

Query: 591 GDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
                A  +LE + K   +  V   N L+  LC    V  A   F  ++      D VS 
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 648 AALKNACYESNKY----ALFSDLSQR 669
           + + N   ++NK      LF  + +R
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIER 391



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 5/222 (2%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++  + D +TY+ ++S   K  +  +AL +   M + G+NPD+  YT ++   CR  K+ 
Sbjct: 3   EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+++ F + I  G       Y ++I G  +D NI  A K  + M   G  PDNITY  ++
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKK 606
           SGLC+  K+ EA QF++SM  +G SP  V    L     K+G  A A  + +++   D+K
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182

Query: 607 LW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +   + T NTLI   C  ++   A   F  ++ K    D V+
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 222/394 (56%), Gaps = 4/394 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C +G ++     F EM   G   +  +Y  ++ AYC+MGR+ EA   L +M
Sbjct: 12  TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +G   +  +  ++I   C +   GS+K+A+E+LEEM  KG+ P+  T+  L++G CK+
Sbjct: 72  SSKGMQPNLISYNVIINGLCRE---GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  +  ++VR +   P+V TYTA+I+  CK   +NRA    ++M+ +GL PN  T
Sbjct: 129 GNFHQALVIHAEMVR-NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+LI G  + G    AY +++ M + G +P++  YNA I G C   R++EA  ++++  
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D ++Y+ ++S   ++ E  +A  +   MV+ G++PD   Y++LI   C  +++ 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    QE +  GL P + TYT++I  Y  +G+++ A+     M   G  PD +TY  LI
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           +GL KQ++  EA +    +I +   P +VT  TL
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 203/398 (51%), Gaps = 7/398 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +LI  FC  G    +++      EM R G  PNV T+  LID  CK G  ++AF L 
Sbjct: 12  TYNILIRGFCSVG---ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL- 67

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           LK + S   +PN+ +Y  +I+G C+E  M  A  +LE M  +G  P+  TY +L+ G+CK
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            GNF +A  +   M + G +P++  Y A+I+ +CK   +  A E   +   R L+ ++ T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           YT L+    +Q    +A  +   M ++G +P +  Y   I   C  ++M+E+    QE +
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   +Y+++I G+ R G +  A +  Q M + G +PD +TY +LI GLC+  +L 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
           EAC   + M+  G+ P E T  TL   YC +GD   A+ + + +  K ++    T + LI
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             L  + R   A     KL+ ++     V+   L   C
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 234/483 (48%), Gaps = 24/483 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F  +G L++G     EM  NG LP +  T N ++   C++G ++ A  +   M ++
Sbjct: 16  LIRGFCSVGELQKGLGCFGEMERNGCLPNVV-TYNTLIDAYCKMGRIDEAFGLLKSMSSK 74

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  SY +++   CR G + EA   L  M  +G   D  T   L+  +C +   G+ 
Sbjct: 75  GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE---GNF 131

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA  +  EMVR G  P+V T+T LI+ +CK     +A   F ++ R    +PN  TYT 
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTT 190

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+ ++  +N A  +L  M E G  P+  TY + I+GHC +   E A  ++  M ++G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++ +Y+ II G C+KG +  A+++ ++  ++ +  D +TY+ L+    +     +A 
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+  GL PD   YTTLI A+C +  + ++     E I  G  P   TY+ +I G 
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEAC 562
            +      A +   ++      P ++TY                ALI G C +  + EA 
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
           + +ESM+ +   P E     + + +C+ G+   A  + + +    ++    TV TLI+ L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 620 CSE 622
             E
Sbjct: 491 FKE 493



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 21/432 (4%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y +++  +C +G + +       M   G + +  T   LI A+C     G I 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKM---GRID 62

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF LL+ M  KG +PN+ ++ V+I+GLC++G  ++A+ + L+ +    + P+  TY  +
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI-LEEMGYKGFTPDEVTYNTL 121

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GYCKE   ++A ++   M   G+ P+  TYT+LI   CK  N  RA +  D M   G 
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +IDG  ++G + EAY +L +  +       +TY   +  H      ++ALG
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   MV+ GL PD+ +Y+T+I+ FCR+ ++  + +  QE +  G+ P   TY+S+I G  
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               ++ A    Q M  +G  PD  TY  LI+  C +  L++A   ++ MI KG  P   
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP--- 358

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
                        D+ T  +++  L+K+   R    L+ KL  E+ V  + + +  L+  
Sbjct: 359 -------------DAVTYSVLINGLNKQARTREAKRLLFKLIYEESV-PSDVTYDTLIEN 404

Query: 639 DQNVDRVSLAAL 650
             N++  S+ AL
Sbjct: 405 CSNIEFKSVVAL 416



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 227/448 (50%), Gaps = 19/448 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++GR+ E F ++  M++ G+     + N ++   C  G ++ A E+ +EM  +G
Sbjct: 51  LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  YC+ G   +A    + M+  G      T T LI + C      ++ 
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR---NLN 167

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E  ++M  +G +PN  T+T LIDG  ++G   +A+R+  ++  S  + P+V TY A 
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSVVTYNAF 226

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C  E+M  A  +++ M E+GL P+  +Y+++I G C+ G  +RA+ +   M ++G 
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P+   Y+++I GLC+  R+ EA +L ++     L  D+ TYT L++ +  + +  +AL 
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI--C- 515
           L   M+  G  PD   Y+ LI    +Q + +E+++   + I     P+  TY ++I  C 
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 516 ------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                       G+   G +  A + F+ M +    P    Y  +I G C+   L +A  
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQG 591
            Y+ MI  G  P  VT +TL     K+G
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEG 494



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 187/341 (54%), Gaps = 5/341 (1%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++RS    PNV+TY  +I G+C   ++ +       M+  G LPN  TY +LI  +CK+G
Sbjct: 1   MIRS-RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A+ L+  M  +G  PN+ +YN II+GLC++G ++EA+E+L++   +    D++TY 
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            LL+ + K+    QAL +   MV+ G++P +  YT LI + C+ + +  + +FF +    
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P + TYT++I G+ R G ++ A +    M + G +P  +TY A I G C   +++EA
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
               + M+ KG++P  V+  T+   +C++G+   A  + + + +K       T ++LI+ 
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
           LC  +R+  A     ++L      D  +   L NA C E +
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 17/277 (6%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R++E   +V EM   GL     + + ++   C  G ++ A ++  EM  +GV  DA +Y 
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C M R+TEA      MLD G   D  T T LI A+C     G + +A  L +EM
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC---VEGDLNKALHLHDEM 351

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV--------------H 333
           + KG+ P+  T++VLI+GL K+  T +A RL  KL+  ++   +V               
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +  A+I G+C +  M+ A+ + E M E+   P    Y  +I+GHC+ GN  +A++L   M
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
              G  P+      +I  L K+G  +E  E++    +
Sbjct: 472 IHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 508


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 235/480 (48%), Gaps = 6/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G++ +  S+   MT++G      TL+ ++    + G +  A  +F  M ARG
Sbjct: 97  LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  ++   C+  ++  A   L+ M       D  T  +LI   C  G    ++
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSG---DVE 213

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A    +EM+  G KP+VYT+ +LI G CK G T+ A     +    +    ++HTYTA+
Sbjct: 214 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    K +K+  A  L+E++   G  P   TY +L+ G CK+G  E A DL+  +   GC
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP++  Y ++IDGL K+ R  EAY+L K+   R L  D + YT L+ E L+  +  QA  
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M   G  PD+   +T+I    +  ++  + + F+     GL P +  Y+++I G  
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A++   +M +  C PD ITY  LI GLCK   ++ A  F++ M+  G  P   
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 513

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L   +CK G++  A  + + +        + T   LI  LC  +++  A+L+F  +
Sbjct: 514 TYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 231/508 (45%), Gaps = 43/508 (8%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +++E  +++ ++T NG     +T N ++   C++G +E A ++  ++   G   D  +Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++    +  R  EA +    M  RG  LD    T LI      G    I QA  + + M
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG---KIPQASSVYKTM 117

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G  P+V T + +IDGL K G    A R+F K + +    PN   Y+A+I G CK  K
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF-KSMEARGLAPNEVVYSALIHGLCKARK 176

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A  +L +MK+    P+T TY  LI G CK G+ E A    D M + GC P++Y YN 
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236

Query: 408 IIDGLCKKG------------------------------------RVQEAYELLKKAFQR 431
           +I G CK G                                    +++EA  L++K    
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
                  TY  LL+   K    ++A+ L  ++V  G  PD+  YT+LI    ++K+  E+
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            K F+E    GL      YT++I   L+ G I  A   ++ M   GC PD +T   +I G
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR- 610
           L K  ++  A + ++SM  +G++P EV    L +  CK      A+ +L  + K      
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKLL 636
             T N LI  LC    V  A  FF ++L
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEML 504



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T T N ++   C+ G VE A   FDEM   G   D  +Y +++  +C+ G    A   L+
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 248 AMLD-RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                 G  +D  T T ++           I++A  L+E++   G  P + T+  L++GL
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAK---NKKIEEAVALMEKITANGCTPTIATYNALLNGL 312

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G  E+A  L  K+V  +   P+V TYT++I G  KE++   A  L + M  +GL  +
Sbjct: 313 CKMGRLEEAIDLLRKIV-DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T  YT+LI    + G   +A  +   M   GC P++   + +IDGL K GR+  A  + K
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
               R L  +++ Y+ L+    K  +   AL +  +M KA   PD   Y  LI   C+  
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            ++ +  FF E + AG  P   TY  +I G+ + GN  +A   F  M+   C+ + +TYG
Sbjct: 492 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYG 551

Query: 547 ALISGLCKQSKLDEACQFYESMIGKG 572
           ALISGLCK+ +L +A  +++ M  +G
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 215/451 (47%), Gaps = 8/451 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A  + +++ A G     ++Y  ++   C+MGR+ EA   L  ++D G   D  T T 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI      G      +A++L +EM  +G   +   +T LI  L + G   +A  ++ K +
Sbjct: 62  LIDGL---GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY-KTM 117

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S    P+V T + MI G  K  ++  A  + + M+ +GL PN   Y++LI+G CK    
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A +++  M K  CTP+   YN +IDGLCK G V+ A     +  +   + D  TY IL
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 444 LSEHLKQAETKQAL-GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +S   K   T  A   L       G   DIH YT ++    + KK++E+    ++    G
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             PT  TY +++ G  + G +  A+   +++   GC PD +TY +LI GL K+ +  EA 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
           + ++ M  +G++   V    L  E  + G    A  + +++     +    T++T+I  L
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
               R+G A   F  +  +    + V  +AL
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 448



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 4/330 (1%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  A  L+E++   G  P   TY +L+ G CK+G  E A DL+  +   GCTP++  Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGL K+ R  EAY+L K+   R L  D + YT L+ E L+  +  QA  ++  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  PD+   +T+I    +  ++  + + F+     GL P +  Y+++I G  +   +  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++   +M +  C PD ITY  LI GLCK   ++ A  F++ M+  G  P   T   L   
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 587 YCKQG--DSATAMIILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
           +CK G  D+A+  +  E+      + I T   ++  L   K++  A     K+       
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 643 DRVSLAALKNACYESNKYALFSDLSQRIAE 672
              +  AL N   +  +     DL ++I +
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVD 330


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 219/447 (48%), Gaps = 21/447 (4%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           + +AE VF EM    V  +  +Y +++  +C  G +  A R+   M  +G + +  T   
Sbjct: 186 ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT 245

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +C       I   FELL  M  KG +PN+ ++ V+I+GLC++G   K     L  +
Sbjct: 246 LIDGYCK---LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM-KEISFVLTEM 301

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
               Y  +  TY  +I GYCKE   ++A ++   M   GL P+  TYTSLI+  CK GN 
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            RA + +D M   G  PN   Y  ++DG  +KG + EAY +LK+          +TY  L
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++ H    +   A+ +   M + GL PD+ +Y+T+++ FCR   + E+ +  ++ +  G+
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY+S+I G+        A   F  M ++G  PD  TY ALI+  C +  L +A Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            +  M+ KG+ P                D  T  +++  L+K+   R    L+ KL  E+
Sbjct: 542 LHNEMVEKGVLP----------------DVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
            V  + + +H L+    N++  S+ +L
Sbjct: 586 SVP-SDVTYHTLIENCSNIEFKSVVSL 611



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 233/487 (47%), Gaps = 24/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F   G L         M   G LP +  T N ++   C+L  ++   E+   M  +
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVV-TYNTLIDGYCKLRKIDDGFELLRSMALK 269

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  SY +++   CR GR+ E    L+ M  RG  LD  T   LI  +C +   G+ 
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKE---GNF 326

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA  +  EM+R G  P+V T+T LI  +CK G   +A   FL  +R     PN  TYT 
Sbjct: 327 HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE-FLDQMRVRGLCPNERTYTT 385

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+ ++  MN A  +L+ M + G  P+  TY +LI GHC  G    A  +++ M ++G
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            TP++ +Y+ ++ G C+   V EA  + +K   + ++ D ITY+ L+    +Q  TK+A 
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M++ GL PD   YT LI A+C +  ++++ +   E +  G+ P   TY+ +I G 
Sbjct: 506 DLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEAC 562
            +      A +   ++      P ++TY                +LI G C +  + EA 
Sbjct: 566 NKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKL 619
           Q +ESM+ K   P       + + +C+ GD   A  + + + K    L   TV  L++ L
Sbjct: 626 QVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTL 685

Query: 620 CSEKRVG 626
             E +V 
Sbjct: 686 HKEGKVN 692



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 233/454 (51%), Gaps = 21/454 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G ++ A   FD M  +G   +  +Y  ++  YC++ ++ +    L +M
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +G   +  +  ++I   C +   G +K+   +L EM ++G+  +  T+  LI G CK+
Sbjct: 267 ALKGLEPNLISYNVVINGLCRE---GRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKE 323

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  +  +++R     P+V TYT++I   CK   MNRA   L++M+ +GL PN  T
Sbjct: 324 GNFHQALVMHAEMLRH-GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G  + G    AY ++  M   G +P++  YNA+I+G C  G++ +A  +L+   
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D ++Y+ +LS   +  +  +AL +  +MV  G+ PD   Y++LI  FC Q++ K
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+   F E +  GL P + TYT++I  Y  +G++  A++    M + G  PD +TY  LI
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +GL KQ++  EA +    +  +   P +VT  TL  E C                  +  
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI-ENCSN----------------IEF 605

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           ++V +LI+  C +  +  A   F  +L K+   D
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 203/391 (51%), Gaps = 14/391 (3%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK----GWTEKAFRLFLKLVRSDNYKPNV 332
           I +A  ++      G+ P V ++  ++D   +      + E  F+  L+        PNV
Sbjct: 150 IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ----SQVSPNV 205

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G+C    ++ A    +RM+++G LPN  TY +LI G+CK+   +  ++L+  
Sbjct: 206 FTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRS 265

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  PN+ +YN +I+GLC++GR++E   +L +  +R    D++TY  L+  + K+  
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGN 325

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             QAL +   M++ GL+P +  YT+LI + C+   M  + +F  +    GL P + TYT+
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G+ + G ++ A +  + M   G +P  +TY ALI+G C   K+ +A    E M  KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMA 628
           ++P  V+  T+   +C+  D   A+ +   +  K  I+    T ++LI+  C ++R   A
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK-GIKPDTITYSSLIQGFCEQRRTKEA 504

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
              F ++L      D  +  AL NA C E +
Sbjct: 505 CDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 202/426 (47%), Gaps = 28/426 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G   +   M  EM  +GL     T   ++   C+ G +  A E  D+M  RG
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +C +  +Y  +V  + + G + EA R L  M+D G      T   LI   C     G + 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC---IAGKMV 432

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +LE+M  KG  P+V +++ ++ G C+    ++A R+  K+V +   KP+  TY+++
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV-AKGIKPDTITYSSL 491

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C++ +   A  L + M   GL P+  TYT+LI  +C  G+ ++A  L + M ++G 
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y+ +I+GL K+ R +EA  LL K F  E     +TY  L+              
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN------------ 599

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
             C       N +  +  +LI  FC +  M E+++ F+  +     P    Y  MI G+ 
Sbjct: 600 --CS------NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHC 651

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G+I  A   ++ M + G     +T  AL+  L K+ K++E      S+I   +  CE+
Sbjct: 652 RGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE----LNSVIANVLRSCEL 707

Query: 579 TRVTLA 584
           +    A
Sbjct: 708 SEAEQA 713



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 175/408 (42%), Gaps = 65/408 (15%)

Query: 129 FRHFMRLYIVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRL 169
            RH +   ++  TSLI +    GN  RA E +  M               V  F++ G +
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
            E + ++ EM +NG      T N ++   C  G +  A  V ++M  +G+  D  SY  +
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------- 272
           +  +CR   V EA R    M+ +G   D  T + LI  FC++                  
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGL 516

Query: 273 ---------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                            G +++A +L  EMV KG  P+V T++VLI+GL K+  T +A R
Sbjct: 517 PPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKR 576

Query: 318 LFLKLVRSDNYKPNVHTYT--------------AMISGYCKEEKMNRAEMLLERMKEQGL 363
           L LKL   ++   +V  +T              ++I G+C +  M  A+ + E M E+  
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNH 636

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y  +I+GHC+ G+  +AY L   M K G   +     A++  L K+G+V E   
Sbjct: 637 KPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNS 696

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           ++    +    ++     +L+  + ++      L +   M K G  P+
Sbjct: 697 VIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 232/451 (51%), Gaps = 24/451 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT---NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +V++F   G L +G   V+ +     N  P +  T N +V   C+ G +E A +VFDEM 
Sbjct: 193 LVAAFCRAGEL-DGAERVVSLMREEGNAKPNLV-TFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+  D  SY  ++  YC++G + E+    S M  RG + D  T T LI A C  G   
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG--- 307

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +++QA  L+ +M  +G + N  T T LIDG CKKG+ + A  L ++ +R    +P+V  Y
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL-LAVEEMRKCGIQPSVVCY 366

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+I+GYCK  +M+ A  L+  M+ + + P+  TY+++I G+CKVGN + A+ L   M K
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+++I GLC++ R+ +A EL +   Q  +Q D+ TYT L+  H K+   ++
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS-MI 514
           AL L   M++ G+ PD+  Y+ LI    +  + KE+ +   +       P    Y + M+
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 546

Query: 515 C--------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           C              G+   G +  A K +Q M       D   Y  LI G C+   + +
Sbjct: 547 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           A  F++ M+  G SP   + ++L     ++G
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 220/422 (52%), Gaps = 6/422 (1%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A R+LS+ML  G   +  T  +L+ A C    RG +++A  ++ +M   G  PN  T
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALC---ARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+   C+ G  + A R+   +    N KPN+ T+ +M++G CK  +M  A  + + M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +GL P+  +Y +L+ G+CKVG    +  +   M + G  P++  + ++I   CK G +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  L+ +  +R L+ +++T+T L+    K+     AL     M K G+ P +  Y  L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  +C+  +M  + +  +E     + P   TY+++I GY + GN+ SA +  Q+M + G 
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD ITY +LI GLC++ +L++AC+ +E+M+  G+ P E T  TL   +CK+G+   A+ 
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 599 ILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + + + +K  +  V T   LI  L    R   A     KL  +D   D +   AL   C 
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 656 ES 657
           ++
Sbjct: 550 KA 551



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 211/384 (54%), Gaps = 5/384 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G+     T N +V   C  G +E A  V  +M   G   +A +Y  +V A+CR G 
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 239 VTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +  A+R +S M + G    N  T   ++   C     G ++ A ++ +EMVR+G  P+V 
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA---GRMEGARKVFDEMVREGLAPDVV 259

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           ++  L+ G CK G   ++  +F ++ +     P+V T+T++I   CK   + +A  L+ +
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+E+GL  N  T+T+LI G CK G  + A   ++ M K G  P++  YNA+I+G CK GR
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A EL+++   + ++ D +TY+ ++S + K      A  L  +M+K G+ PD   Y++
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C +K++ ++ + F+  +  G+ P + TYT++I G+ ++GN+  A+     M + G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 538 CAPDNITYGALISGLCKQSKLDEA 561
             PD +TY  LI+GL K ++  EA
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEA 522



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 193/373 (51%), Gaps = 3/373 (0%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A      M   GV  +  +Y ++V A C  GR+ EA   +  M   G   +  T   L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           AFC  G     ++   L+ E      KPN+ T   +++GLCK G  E A ++F ++VR +
Sbjct: 196 AFCRAGELDGAERVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-E 252

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V +Y  ++SGYCK   ++ +  +   M ++GL+P+  T+TSLI+  CK GN E+A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+  M + G   N   + A+IDG CKKG + +A   +++  +  +Q   + Y  L++ 
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K      A  L   M    + PD+  Y+T+I+ +C+   +  + +  Q+ +  G+ P 
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY+S+I G   +  ++ A + F+ M Q+G  PD  TY  LI G CK+  +++A   ++
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 567 SMIGKGISPCEVT 579
            MI KG+ P  VT
Sbjct: 493 EMIRKGVLPDVVT 505



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 222/430 (51%), Gaps = 19/430 (4%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           GN +        MV+   + GR++    +  EM   GL     + N ++   C++G +  
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +  VF EM  RG+  D  ++  ++ A C+ G + +A   ++ M +RG  ++  T T LI 
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC KGF   +  A   +EEM + G +P+V  +  LI+G CK G  + A R  ++ + + 
Sbjct: 337 GFCKKGF---LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA-RELIREMEAK 392

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             KP+V TY+ +ISGYCK   ++ A  L ++M ++G+LP+  TY+SLI G C+      A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L + M + G  P+ + Y  +IDG CK+G V++A  L  +  ++ +  D +TY++L++ 
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAY---------------TTLIAAFCRQKKMKES 491
             K A TK+A  L  ++      PD   Y                 L+  FC +  MKE+
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEA 572

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +K +Q  +          Y+ +I G+ R GN+  A+ + ++M + G +P++ +  +L+ G
Sbjct: 573 DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632

Query: 552 LCKQSKLDEA 561
           L ++  + EA
Sbjct: 633 LFEEGMVVEA 642



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 2/211 (0%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++ AYNA++  L     +  A   L    +  +  +  TY IL+     +   ++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYTSMIC 515
           +G+   M  AG  P+   Y TL+AAFCR  ++  +E+        G   P   T+ SM+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G +  A K F  M + G APD ++Y  L+SG CK   L E+   +  M  +G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             VT  +L +  CK G+   A+ ++  + ++
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRER 322



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 4/207 (1%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L  A    A      M++ G+ P+++ Y  L+ A C + +++E+     +   AG  P  
Sbjct: 128 LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNA 187

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCA-PDNITYGALISGLCKQSKLDEACQFYE 566
            TY +++  + R G +  A +    M + G A P+ +T+ ++++GLCK  +++ A + ++
Sbjct: 188 VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEK 623
            M+ +G++P  V+  TL   YCK G    ++ +   + ++  +  V T   LI   C   
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +  A     ++  +   ++ V+  AL
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTAL 334



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P+   Y +++   L D ++ SA ++   M + G AP+  TY  L+  LC + +L+EA
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIIL--ESLDKKLWIRTVNTLIR 617
                 M G G +P  VT  TL   +C+ G  D A  ++ L  E  + K  + T N+++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALFSDLSQR 669
            LC   R+  A   F +++ +    D VS   L     K  C   +  A+FS+++QR
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES-LAVFSEMTQR 287


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 230/435 (52%), Gaps = 9/435 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++ RL++    + +M + G      T   V+   C    +  A +  +EM  R 
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++   C+ GRV EA   LS M  +  +    T   LI+  C K  R S  
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC-KAERAS-- 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A++LLEEMV  G  P+++T+T LI G CK   ++ A R+F +LV +  ++P+V TY+ +
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV-ARGFRPDVVTYSCL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           I G CKE ++  A  L  RM + G  +PNT TY SLI G C++G  + A +L++ M + G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P++  Y  +++G CK  R+ +AY+LL +  ++ L  D +T+T L+    ++     A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   M +   +P ++ Y T++  +CR  +++E+ KF  E +     P   ++  MI G 
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGL 369

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GISPC 576
            +    S A++  +   +  C PD + Y  +I GLC++ K+DEAC+ Y  M+ + G  P 
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 577 EVTRVTLAYEYCKQG 591
            +T  TL    C  G
Sbjct: 430 SITYSTLVTGLCNAG 444



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 218/409 (53%), Gaps = 11/409 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E    + EM N  L     T   ++   C+ G V+ A  +  +M  + V   A +Y 
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C+  R +EA   L  M+  G I D  T T LIT FC          A  + E++
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK---KSDDALRVFEQL 176

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G++P+V T++ LIDGLCK+G  ++A  LF ++++S +  PN  TY ++ISG+C+  K
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A  LLERM E G  P+  TYT+L+ G CK+   + AYDL++ M ++G TP++  + +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++DGLC++ R+ +A  +L +  ++       TY  +L  + +  + ++A      + +  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P++ ++  +I   C+  +  E+ +  +EA      P    YT++I G  R+  +  A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 528 KYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + +++M  + GC P++ITY  L++GLC    LD A  + E    KG  P
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVP 459



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 222/429 (51%), Gaps = 14/429 (3%)

Query: 214 MCARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           M A   C AD  +Y  ++   C++ R+ +A  +L  M+ +G   D  T T +I A C   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALC--- 57

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A + LEEM  +   PNV T+TVLIDGLCK G  ++A  L  K+ +     P  
Sbjct: 58  VENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTA 115

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY ++ISG CK E+ + A  LLE M   G +P+  TYT+LI G CK    + A  + + 
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHLKQA 451
           +   G  P++  Y+ +IDGLCK+GR++EA +L  +  +      + +TY  L+S   +  
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A+ L  RM + G +PD+  YTTL+  FC+  ++ ++     +    GL P   T+T
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S++ G  R+  +S AV     M +  C+P   TY  ++ G C+ ++L+EA +F   M+ +
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEE 352

Query: 572 GISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGM 627
              P  V    +     CK   S+ AM ++E   ++     V    T+I  LC EK+V  
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412

Query: 628 AALFFHKLL 636
           A   + K+L
Sbjct: 413 ACRVYRKML 421



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 47/348 (13%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++    + GRLKE                                   A ++F  M   
Sbjct: 190 CLIDGLCKEGRLKE-----------------------------------AIDLFGRMIKS 214

Query: 218 GVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           G C  +  +Y  ++  +CRMG++ EA   L  M + G+  D  T T L+  FC       
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK---LAR 271

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A++LL +M RKG  P+V T T L+DGLC++     A  + L  +R  +  P V+TY 
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI-LGEMRRKSCSPTVYTYN 330

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ GYC+  ++  A   +  ++E    PN  ++  +I G CKV     A +L++   + 
Sbjct: 331 TILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQ 455
            C P++  Y  +IDGLC++ +V EA  + +K  +      + ITY+ L++         +
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           A G     ++ G  P+I  Y  LI AF +  + +++ +   + +  G 
Sbjct: 449 ARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 232/451 (51%), Gaps = 24/451 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT---NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +V++F   G L +G   V+ +     N  P +  T N +V   C+ G +E A +VFDEM 
Sbjct: 193 LVAAFCRAGEL-DGAERVVSLMREEGNAKPNLV-TFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+  D  SY  ++  YC++G + E+    S M  RG + D  T T LI A C  G   
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG--- 307

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +++QA  L+ +M  +G + N  T T LIDG CKKG+ + A  L ++ +R    +P+V  Y
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL-LAVEEMRKCGIQPSVVCY 366

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+I+GYCK  +M+ A  L+  M+ + + P+  TY+++I G+CKVGN + A+ L   M K
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+++I GLC++ R+ +A EL +   Q  +Q D+ TYT L+  H K+   ++
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS-MI 514
           AL L   M++ G+ PD+  Y+ LI    +  + KE+ +   +       P    Y + M+
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 546

Query: 515 C--------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           C              G+   G +  A K +Q M       D   Y  LI G C+   + +
Sbjct: 547 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           A  F++ M+  G SP   + ++L     ++G
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A R+LS+ML  G   +  T  +L+ A C    RG +++A  ++ +M   G  PN  T
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCA---RGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+   C+ G  + A R+   +    N KPN+ T+ +M++G CK  +M  A  + + M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +GL P+  +Y +L+ G+CKVG    +  +   M + G  P++  + ++I   CK G +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  L+ +  +R L+ +++T+T L+    K+     AL     M K G+ P +  Y  L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  +C+  +M  + +  +E     + P   TY+++I GY + GN+ SA +  Q+M + G 
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD ITY +LI GLC++ +L++AC+ +E+M+  G+ P E T  TL   +CK+G+   A+ 
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 599 ILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + + + +K  +  V T   LI  L    R   A     KL  +D   D +   AL   C
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 211/384 (54%), Gaps = 5/384 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G+     T N +V   C  G +E A  V  +M   G   +A +Y  +V A+CR G 
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 239 VTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +  A+R +S M + G    N  T   ++   C     G ++ A ++ +EMVR+G  P+V 
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA---GRMEGARKVFDEMVREGLAPDVV 259

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           ++  L+ G CK G   ++  +F ++ +     P+V T+T++I   CK   + +A  L+ +
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+E+GL  N  T+T+LI G CK G  + A   ++ M K G  P++  YNA+I+G CK GR
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A EL+++   + ++ D +TY+ ++S + K      A  L  +M+K G+ PD   Y++
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C +K++ ++ + F+  +  G+ P + TYT++I G+ ++GN+  A+     M + G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 538 CAPDNITYGALISGLCKQSKLDEA 561
             PD +TY  LI+GL K ++  EA
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEA 522



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 222/430 (51%), Gaps = 19/430 (4%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           GN +        MV+   + GR++    +  EM   GL     + N ++   C++G +  
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +  VF EM  RG+  D  ++  ++ A C+ G + +A   ++ M +RG  ++  T T LI 
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC KGF   +  A   +EEM + G +P+V  +  LI+G CK G  + A R  ++ + + 
Sbjct: 337 GFCKKGF---LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA-RELIREMEAK 392

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             KP+V TY+ +ISGYCK   ++ A  L ++M ++G+LP+  TY+SLI G C+      A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L + M + G  P+ + Y  +IDG CK+G V++A  L  +  ++ +  D +TY++L++ 
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAY---------------TTLIAAFCRQKKMKES 491
             K A TK+A  L  ++      PD   Y                 L+  FC +  MKE+
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEA 572

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +K +Q  +          Y+ +I G+ R GN+  A+ + ++M + G +P++ +  +L+ G
Sbjct: 573 DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632

Query: 552 LCKQSKLDEA 561
           L ++  + EA
Sbjct: 633 LFEEGMVVEA 642



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 194/377 (51%), Gaps = 3/377 (0%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A      M   GV  +  +Y ++V A C  GR+ EA   +  M   G   +  T   L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           AFC  G     ++   L+ E      KPN+ T   +++GLCK G  E A ++F ++VR +
Sbjct: 196 AFCRAGELDGAERVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-E 252

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V +Y  ++SGYCK   ++ +  +   M ++GL+P+  T+TSLI+  CK GN E+A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+  M + G   N   + A+IDG CKKG + +A   +++  +  +Q   + Y  L++ 
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K      A  L   M    + PD+  Y+T+I+ +C+   +  + +  Q+ +  G+ P 
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY+S+I G   +  ++ A + F+ M Q+G  PD  TY  LI G CK+  +++A   ++
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 567 SMIGKGISPCEVTRVTL 583
            MI KG+ P  VT   L
Sbjct: 493 EMIRKGVLPDVVTYSVL 509



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 2/211 (0%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++ AYNA++  L     +  A   L    +  +  +  TY IL+     +   ++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYTSMIC 515
           +G+   M  AG  P+   Y TL+AAFCR  ++  +E+        G   P   T+ SM+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G +  A K F  M + G APD ++Y  L+SG CK   L E+   +  M  +G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             VT  +L +  CK G+   A+ ++  + ++
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRER 322



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 4/207 (1%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L  A    A      M++ G+ P+++ Y  L+ A C + +++E+     +   AG  P  
Sbjct: 128 LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNA 187

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCA-PDNITYGALISGLCKQSKLDEACQFYE 566
            TY +++  + R G +  A +    M + G A P+ +T+ ++++GLCK  +++ A + ++
Sbjct: 188 VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEK 623
            M+ +G++P  V+  TL   YCK G    ++ +   + ++  +  V T   LI   C   
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +  A     ++  +   ++ V+  AL
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTAL 334



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P+   Y +++   L D ++ SA ++   M + G AP+  TY  L+  LC + +L+EA
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIIL--ESLDKKLWIRTVNTLIR 617
                 M G G +P  VT  TL   +C+ G  D A  ++ L  E  + K  + T N+++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALFSDLSQR 669
            LC   R+  A   F +++ +    D VS   L     K  C   +  A+FS+++QR
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES-LAVFSEMTQR 287


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 243/493 (49%), Gaps = 14/493 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R + ++  ++S F  I  +K   S+ +EM ++ +     TLN +V   C+LG V  AE  
Sbjct: 170 RCYNMLLMLLSRFLMIDEMK---SVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELY 226

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
             ++   G+  D  +Y  +++ YCR   V  A+    +M ++G + +  + T LI  FC+
Sbjct: 227 VSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCE 286

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                 + +A +L  +M      P V T+TV+I  LC+ G   +A  +F K +   + +P
Sbjct: 287 AR---RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF-KEMTEKHCQP 342

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NVHTYT +I   C++   + A+ +L  M E+GL+P+  TY +LI G+CK G    A +++
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            LM    C+PN   YN +I G C+   + +A  LL K  +R+LQ + +TY IL+    K+
Sbjct: 403 SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKE 462

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +   A  L   M ++GL PD   Y+  I   C++  ++E+   F+     G+   +  Y
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +++I GY + G +S       +M   GC P++ITY +LI G CK+    EA    + MI 
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLIRKLCSEKRV 625
           + I P   T   L     K  +   A  + + +        ++I T    I   CS  R+
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYT--AFIHAYCSHGRL 640

Query: 626 GMAALFFHKLLGK 638
             A +   K+  K
Sbjct: 641 KDAEVLICKMNAK 653



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 212/430 (49%), Gaps = 4/430 (0%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           ++ + M N G      +   ++   CE   V+ A ++F +M          +Y +++ A 
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFAL 319

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C++GR TEA      M ++    +  T T+LI + C+     +   A ++L  M+ KG  
Sbjct: 320 CQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDS---NFDDAKKILNGMLEKGLI 376

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V T+  LIDG CKKG +  A  + L L+ S+N  PN  TY  +I G+C+ + +++A  
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEI-LSLMESNNCSPNARTYNELILGFCRGKNIHKAMS 435

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL +M E+ L PN  TY  LI+G CK G+   AY L+ LM + G  P+ + Y+  ID LC
Sbjct: 436 LLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+G V+EA  L +   ++ ++A+++ Y+ L+  + K  +      L  +M+ AG  P+  
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y +LI  +C++K  KE+       I   + P  +TYT +I   L+D     A   F +M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  PD   Y A I   C   +L +A      M  KGI P  +        Y + G  
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675

Query: 594 ATAMIILESL 603
             A  IL+ +
Sbjct: 676 DGAFGILKRM 685



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 197/395 (49%), Gaps = 6/395 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  ++GR  E  +M  EMT         T   ++   CE    + A+++ + M  +G
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SI 277
           +     +Y  ++  YC+ G    A   LS M       +  T   LI  FC    RG +I
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC----RGKNI 430

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  LL +M+ +  +PNV T+ +LI G CK+G    A++L L L+      P+  TY+ 
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL-LSLMNESGLVPDEWTYSV 489

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            I   CK   +  A  L E +KE+G+  N   Y++LI G+CKVG       L+D M   G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN   YN++IDG CK+   +EA  L+    +R+++    TYTIL+   LK  E  QA 
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F +M+  G +PD+  YT  I A+C   ++K++E    +    G+ P    YT  I  Y
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            R G+I  A    +RM+++GC P   TY  LI  L
Sbjct: 670 GRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 214/485 (44%), Gaps = 53/485 (10%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y V   SL  + NF+ A +++          G L++G           +P +  T N ++
Sbjct: 347 YTVLICSLCEDSNFDDAKKILN---------GMLEKGL----------IPSVV-TYNALI 386

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C+ GL   A E+   M +     +A +Y  +++ +CR   + +A   L  ML+R   
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            +  T  +LI   C +G  GS   A++LL  M   G  P+ +T++V ID LCK+G  E+A
Sbjct: 447 PNVVTYNILIHGQCKEGDLGS---AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEA 503

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             LF  L +    K N   Y+ +I GYCK  K++    LL++M   G +PN+ TY SLI 
Sbjct: 504 RSLFESL-KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G+CK  NF+ A  L+D+M K    P    Y  +ID L K     +A+++  +        
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP 622

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D   YT  +  +      K A  L C+M   G+ PD   YT  I A+ R   +  +    
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGIL 682

Query: 496 QEAITAGLFPTKETYTSMI-----------------------------CGYLRDGNISSA 526
           +     G  P+  TY+ +I                                 R  +    
Sbjct: 683 KRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFT 742

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +  F +M + GCAP+  TYG  I+GLCK   L+ A + ++ M  KG SP E    +L   
Sbjct: 743 LDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGC 802

Query: 587 YCKQG 591
            C+ G
Sbjct: 803 SCQLG 807



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 3/329 (0%)

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            D   PN+ T   M++GYCK   +  AE+ + ++ + GL  +T TYTSLI G+C+  N +
Sbjct: 197 DDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVD 256

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A  +   M  +GC  N  +Y  +I G C+  RV EA +L  +  +        TYT+++
Sbjct: 257 AANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVII 316

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
               +     +AL +F  M +    P++H YT LI + C      +++K     +  GL 
Sbjct: 317 FALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLI 376

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P+  TY ++I GY + G  +SA++    M    C+P+  TY  LI G C+   + +A   
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSL 436

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCS 621
              M+ + + P  VT   L +  CK+GD  +A  +L  +++   +    T +  I  LC 
Sbjct: 437 LHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCK 496

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              V  A   F  L  K    + V  + L
Sbjct: 497 RGLVEEARSLFESLKEKGIKANEVIYSTL 525



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 197/442 (44%), Gaps = 47/442 (10%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L   + ++  M  +GL     T +  +   C+ GLVE A  +F+ +  +G+ A+   Y
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLE 285
             ++  YC++G+V++    L  ML  G + ++ T   LI  +C +K F    K+A  L++
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF----KEARLLVD 578

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+++  +P   T+T+LID L K    ++A  +F +++ + ++ P+V  YTA I  YC  
Sbjct: 579 IMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH-PDVFIYTAFIHAYCSH 637

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            ++  AE+L+ +M  +G++P+T  YT  I  + + G+ + A+ ++  M + GC P+ Y Y
Sbjct: 638 GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTY 697

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + +I  L      + +           + ++        S   ++ + +  L LF +M +
Sbjct: 698 SCLIKHLSNAKPKEVSSSSELSDLSSGVASND------FSNCWRRVDYEFTLDLFGKMAE 751

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI----------- 514
            G  P+ + Y   I   C+   ++ + + F      G  P ++ Y S++           
Sbjct: 752 HGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811

Query: 515 ------------------------CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
                                   CG   +GN   A + F    Q     D + +  LI 
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871

Query: 551 GLCKQSKLDEACQFYESMIGKG 572
           GL K+   D+    +  M  +G
Sbjct: 872 GLLKKGLSDKCSDLFGIMETQG 893



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 31/306 (10%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A ++FD+M + G   D   Y   + AYC  GR+ +A+  +  M  +G + D    TL 
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLF 665

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-------------- 310
           I A+   G  GSI  AF +L+ M   G +P+ YT++ LI  L                  
Sbjct: 666 IDAY---GRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLS 722

Query: 311 -----------WTEKAFRLFLKL---VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
                      W    +   L L   +      PN +TY   I+G CK   +  A  L +
Sbjct: 723 SGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFD 782

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            MKE+G  PN + Y SL+   C++G +  A   +D+M +    P++ +   ++ GL  +G
Sbjct: 783 HMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEG 842

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
             ++A  +     Q E   D++ + +L+   LK+  + +   LF  M   G       Y+
Sbjct: 843 NDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYS 902

Query: 477 TLIAAF 482
            LI  F
Sbjct: 903 MLIEGF 908



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 18/172 (10%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M  +G     +T  + +   C++G +E A  +FD M  +G   +   Y  ++   C++G
Sbjct: 748 KMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLG 807

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL-------EEMVRK 290
              EA RWL  M++   +    +  LL+    D+G     K+ F          +EMV  
Sbjct: 808 LYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMV-- 865

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
            WK       VLIDGL KKG ++K   LF  ++ +   + +  TY+ +I G+
Sbjct: 866 -WK-------VLIDGLLKKGLSDKCSDLF-GIMETQGCQIHPKTYSMLIEGF 908


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 225/455 (49%), Gaps = 14/455 (3%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM +SF +    +E F+   +M   G P    T N ++  +C+ G++E A ++  +M   
Sbjct: 56  CMANSFDDA---RELFA---DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 109

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++   C+  RV EA    + M   G   +  +   +I   C +     I
Sbjct: 110 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS---KI 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA ++  EM  K   P+ +++ +LIDGL K G   +A++LF +++ S    P+  TY  
Sbjct: 167 DQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS-GITPSAVTYNV 225

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G C    ++ A  L + M+ +G  P+  T+  LI  HCK G  + A+ L+  M  +G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  Y+ +I GLC   RV +A  LL+   +R+ +   +T   L+    K    K+A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV +G +PD+  Y TL+   CR  + + + +   + +  GL P   TYT+++ G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +  A   F +M   GCAP+  TY ALI G C   ++D   + +  M+  GISP  
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 578 VTRVTLAYEYCKQGDSATAMIIL----ESLDKKLW 608
           V   TLA E CK G SA A+ IL    ESL  + W
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 239/530 (45%), Gaps = 53/530 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ +  + G L+E   ++ +M  +G      T N V+   C+   VE A  +F+EM   G
Sbjct: 86  MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  S+  +++  C+  ++ +A +    M  +    D+ +  +LI      G    + 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAG---KLN 202

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A++L + M+  G  P+  T+ V+I G+C     ++A  LF K +RS   +P+  T+  +
Sbjct: 203 EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF-KSMRSKGCRPSRFTFNIL 261

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +CK  K++ A  LL+RM + G +P+  TY++LI G C +   + A  L++ M K  C
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +   N +I GLCK GR++EA E+L          D +TY  L+  H +  +T++A  
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   MV  GL P++  YT L++  C+  ++ E+   F +  ++G  P   TYT++I G+ 
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK------------------------ 554
             G +   +K F  M   G +PD++ YG L + LCK                        
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 501

Query: 555 -------------QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
                          K++ A  F   M+  G  P      +L    CK G    A  +LE
Sbjct: 502 DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561

Query: 602 SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            +    +              K  G AA F  +++GK   ++   L  LK
Sbjct: 562 EIMDLAY------------GGKARGKAAKFVEEMVGKGYEIEDAVLGPLK 599



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 182/392 (46%), Gaps = 5/392 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +   P+ +++ +LIDGL K G    A  LF KL+ S    P+   YT++I G C   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS-GVTPSTVAYTSLIHGLCMAN 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
             + A  L   M  +G  P+  TY  +I   CK G  E A DL+  M ++G  P++  YN
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++DGLCK  RV+EA  L  +  +     ++ ++  ++    +Q++  QA  +F  M   
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PD  +Y  LI    +  K+ E+ K FQ  + +G+ P+  TY  +I G      +  A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ F+ M   GC P   T+  LI   CK+ KLDEA +  + M   G  P  VT  TL   
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 587 YCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C       A  +LE + K   K  + T NTLI  LC   R+  A      ++   Q+ D
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 644 RVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            V+   L +  C           LS  +A G+
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGL 391


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 250/531 (47%), Gaps = 47/531 (8%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M ++ +P I+S  NR++G   ++        +++EM   G+  D  +  ++    C + R
Sbjct: 83  MRSHPIPPISS-FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V+EA   ++ +L RG I +  T T LI   C       I +A  L   M + G  PN  T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLC---MEHRISEATRLFLRMQKLGCTPNAVT 198

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNVHTYTAMISGYCKEEKMNRAEM 353
           +  LI GLC+ G    A +L  +++        N KP V TY+ +I G CK  + + A+ 
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKE 258

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L E MK QG++P+  +Y++LI+G C  G ++++  L D M  +G  P++  ++ +ID LC
Sbjct: 259 LFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+G+V EA +LL+   QR +  + ITY  L+       +   A  LF  M   GL PD  
Sbjct: 319 KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           +YTTLI  +C+  K+KE+   + E +  G  P   TY +++ G  + G +  A K F  M
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438

Query: 534 NQIGCAPDNITYG-----------------------------------ALISGLCKQSKL 558
              G + ++  YG                                    LI GLCK  KL
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTL 615
           + A + +E +  +G+ P  VT   + + +CK G    A I+ E +++      +   NTL
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTL 558

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           +   C   ++       HK++ KD + +  S   + +   +  KY  F DL
Sbjct: 559 LCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 210/433 (48%), Gaps = 18/433 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM----------CAR 217
           R+ E   + + M   G      T   ++   C+ G V  A ++  EM          C  
Sbjct: 176 RISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKP 235

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV     +Y +++   C++GR  EA      M  +G I D  + + LI  FC     G  
Sbjct: 236 GVI----TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC---CAGKW 288

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            Q+  L +EMV +G +P++ T +VLID LCK+G   +A +L L+++      PN+ TY +
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL-LEVMIQRGIVPNLITYNS 347

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+C    +N A  L   M  +GL P+  +YT+LI G+CK    + A +L + M + G
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +PN+  Y  ++ GL +KG+V +A +L        + A+   Y I L    K     +A+
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAM 467

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  +       +I  Y+ LI   C+  K++ + + F++    GL P   TY  MI G+
Sbjct: 468 ELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGF 527

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G + +A   F++M + GC PD I Y  L+ G C+ +KL+E  +    M+ K +SP  
Sbjct: 528 CKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNA 587

Query: 578 VTRVTLAYEYCKQ 590
            +   +    CK 
Sbjct: 588 ASCTIVVDMLCKD 600



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 212/472 (44%), Gaps = 51/472 (10%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK--------------- 290
           L A  +R  I  +  L+L +   C  G   +I QAF   + M+R                
Sbjct: 43  LPAAFNREEISFHHPLSLFLRN-CKTGNITAI-QAFHFFDLMMRSHPIPPISSFNRLLGG 100

Query: 291 --------------------GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                               G  P+++T ++L + LC      +A      ++R   Y P
Sbjct: 101 LAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRR-GYIP 159

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV TYT +I G C E +++ A  L  RM++ G  PN  TY +LI G C+ GN   A  L 
Sbjct: 160 NVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLH 219

Query: 391 DLMGKEG------CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
             M  +       C P +  Y+ IIDGLCK GR  EA EL ++   + +  D I+Y+ L+
Sbjct: 220 KEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLI 279

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                  +  Q+  LF  MV  G+ PD+  ++ LI   C++ K+ E++K  +  I  G+ 
Sbjct: 280 HGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIV 339

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY S+I G+   G+++SA + F  M   G  PD I+Y  LI+G CK  K+ EA   
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399

Query: 565 YESMIGKGISPCEVTRVTL---AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           Y  M+  G SP   T  TL    ++  K GD+     ++++       +     +  LC 
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
              +  A   F++L   +  ++  + + L +   ++ K    + LF  LSQ 
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 70/370 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++    ++GR  E   +  EM   G+ P + S    + G  C  G  + ++ +FDEM  +
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA-GKWDQSKHLFDEMVDQ 301

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS- 276
           GV  D  ++ +++   C+ G+VTEA + L  M+ RG + +  T   LI  FC  G   S 
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361

Query: 277 -------------------------------IKQAFELLEEMVRKGWKPNVYTHTVLI-- 303
                                          +K+A  L  EM++ G  PNV T+  L+  
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421

Query: 304 ---------------------------------DGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                                            DGLCK     +A  LF +L +S N+K 
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL-KSYNFKL 480

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+  Y+ +I G CK  K+  A  L E++ ++GL P+  TY  +I+G CKVG  + A  L 
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M + GCTP+I AYN ++ G C+  +++E  +LL K  Q+++  +  + TI++    K 
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600

Query: 451 AETKQALGLF 460
            + K+ + L 
Sbjct: 601 EKYKKFVDLL 610



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 33/301 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G++ E   ++  M   G+     T N ++   C +G +  A E+F  M ++G
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++  YC+  +V EA    + ML  G   +  T   L+     KG  G  K
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 279 QAF--------------------------------ELLEEMVRKGWKPNVYTHTVLIDGL 306
           + F                                EL  E+    +K N+  ++ LIDGL
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G  E A+ LF KL + +  +P+V TY  MI G+CK  +++ A +L E+M+E G  P+
Sbjct: 493 CKAGKLETAWELFEKLSQ-EGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y +L+ G C+    E    L+  M ++  +PN  +   ++D LCK  + ++  +LL 
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLP 611

Query: 427 K 427
           K
Sbjct: 612 K 612



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 4/155 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+F+E+ +     +  +Y  ++   C+ G++  A      +   G   D  T  ++I 
Sbjct: 466 AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH 525

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC     G +  A  L E+M   G  P++  +  L+ G C+    E+  +L  K+V+ D
Sbjct: 526 GFCK---VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
              PN  + T ++   CK+EK  +   LL +   Q
Sbjct: 583 -VSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 59/122 (48%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           NF+   E   C++    + G+L+  + +  +++  GL     T N ++   C++G V+ A
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             +F++M   G   D  +Y  ++  +C   ++ E  + L  M+ +    + A+ T+++  
Sbjct: 537 NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596

Query: 268 FC 269
            C
Sbjct: 597 LC 598


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 171/595 (28%), Positives = 276/595 (46%), Gaps = 44/595 (7%)

Query: 78  HLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIG--FAKFR----- 130
           +LR  P +L L   + S    QA + +  L ++  S + L F  WA    F  F+     
Sbjct: 30  YLRRHPEQLTL---LSSHFTPQASSNLL-LKSQFDSSLVLKFLDWARSQQFFSFQCKCLA 85

Query: 131 -HFMRLYIVCATS------LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG 183
            H +  Y +  T+      ++ N   E   ++ QC+ +S+ +       F +V++     
Sbjct: 86  LHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK----- 140

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR-VTEA 242
                 +  RV  I   L +V  A+       + G      SY  ++ A  R  + V  A
Sbjct: 141 ------SCARVNLINKALSIVNLAK-------SYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
           +     M++ G   +  T  +LI  FC  G   +++       EM R G  PNV T+  +
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAG---NLEMGLFFFGEMERNGCLPNVVTYNTI 244

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ID  CK     +AF+L L+L+      PN+ +Y  +I+G C+E +M     +LE M ++ 
Sbjct: 245 IDAYCKLRKIGEAFKL-LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            +P+  T+ +LI G+C VGNF +A  L   M K G +PN+  Y  +I+ +CK G +  A 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E L +   R L  +  TYT L+    +Q   KQA  +   MV+ G  P I  Y  LI   
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   +M+++    QE I  G  P   +Y+++I G+ R+  +  A +    M   G +PD 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY +LI GLCKQ +L E C  ++ M+  G+ P EVT  +L   YC +GD   A+ + + 
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + +K +   I T N LI     + R   A     KLL ++   + ++   L + C
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 232/469 (49%), Gaps = 54/469 (11%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  +G+     T N ++   C  G +E     F EM   G   +  +Y  ++ AYC++ 
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++ EA + L  M  +G   +  +  ++I   C +G    +K+  E+LEEM ++ + P+  
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG---QMKETSEILEEMSKRRYVPDRV 309

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T   LI+G C  G   +A  L  ++V+ +   PNV TYT +I+  CK   +NRA   L++
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVK-NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+++GL PN  TYT+LI G  + G  ++AY +M  M + G TP I  YNA+I+G C  GR
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +++A  LL++  +R    D ++Y+ ++S   +  E ++A  L   MV  G++PD+  Y++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+Q+++ E    FQE ++ GL P + TYTS+I  Y  +G++  A++    M Q G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 538 CAPDNITYGALISGLCKQS----------------------------------------- 556
            +PD +TY  LI+G  KQS                                         
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 557 ---------KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
                     ++EA +  ESM+ KG    E     + + + K G+   A
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 200/386 (51%), Gaps = 4/386 (1%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +A  ++      G+ P V ++  ++D + +   + K      K +      PNV+TY 
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+C    +         M+  G LPN  TY ++I  +CK+     A+ L+ LM  +
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PN+ +YN +I+GLC++G+++E  E+L++  +R    D++T+  L++ +       QA
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L   MVK GL+P++  YTTLI + C+   +  + +F  +    GL P   TYT++I G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + + G +  A +  + M + G  P  ITY ALI+G C   ++++A    + MI +G  P 
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 577 EVTRVTLAYEYCKQGDSATAM-IILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFH 633
            V+  T+   +C+  +   A  + +E + K +   + T ++LI+ LC ++R+G     F 
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 634 KLLGKDQNVDRVSLAALKNA-CYESN 658
           ++L      D V+  +L NA C E +
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGD 533



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 225/476 (47%), Gaps = 58/476 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++ ++ E F ++  M   GL     + N V+   C  G ++   E+ +EM  R 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC +G   +A    + M+  G   +  T T LI + C  G   ++ 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG---NLN 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E L++M  +G  PN  T+T LIDG  ++G+ ++A+++  ++V  + + P + TY A+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE-NGFTPTIITYNAL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C   +M  A  LL+ M E+G +P+  +Y+++I G C+    E+A+ L   M  +G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  Y+++I GLCK+ R+ E  +L ++     L  D++TYT L++ +  + +  +AL 
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKK------------------------------- 487
           L   M++ G +PDI  Y  LI  F +Q +                               
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 488 -------------------MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                              M E+++  +  +  G    +E Y  +I G+ + GNI  A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            ++ M   G AP ++T  AL   L  + K  E  Q    ++   +  C +T   LA
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQ----LLDYTLKSCRITEAALA 711



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 171/403 (42%), Gaps = 73/403 (18%)

Query: 137 IVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +V  T+LI++    GN  RA E +  M               +  F++ G LK+ + ++ 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR-- 235
           EM  NG      T N ++   C LG +E A  +  EM  RG   D  SY  ++  +CR  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 236 ---------------------------------MGRVTEADRWLSAMLDRGAILDNATLT 262
                                              R+ E       ML  G   D  T T
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI A+C     G + +A  L +EM++KG+ P++ T+ VLI+G  K+  T++A RL LKL
Sbjct: 523 SLINAYC---IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579

Query: 323 VRSDNYKPNVHTYT---------------AMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           +  ++  PN  TY                A++ G+C +  MN A+ +LE M ++G   N 
Sbjct: 580 LYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNE 638

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             Y  +I+GH KVGN E+AY+L   M   G  P+     A+   L  +G+  E  +LL  
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDY 698

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +     +     +L+  + K+        +   M  +GL P
Sbjct: 699 TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 234/451 (51%), Gaps = 8/451 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+ C+     ++G+++E  +++++MT+ G      +   VV   C +G ++   ++ DE+
Sbjct: 248 VLHCL----CQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+  D   Y  +++  C+ G V EA++ L  M   G   DN   T +I+ FC     
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCK---L 360

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G++  A +L +EM RK   P++ T+T +I G+CK G   +A  +F +++     +P+  T
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML-VKGLEPDEVT 419

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YTA+I GYCK  +M  A  +  +M ++GL PN  TYT+L  G CK G  + A +L+  M 
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  PN+Y YN I++GLCK G +++  +L+++        D ITYT L+  + K  E  
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   M+   L P +  +  L+  FC    +++ E+  +  +  G+ P   T+ S++
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y    N+ +  + ++ M+  G  PD+ TY  LI G CK   + EA   ++ M+ KG S
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
               T   L   + K+     A  + E + K
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRK 690



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 205/408 (50%), Gaps = 4/408 (0%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           IG L +   +V E+   GL       N ++ + C+ G V  AE++   M   GV  D   
Sbjct: 290 IGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVV 349

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++  +C++G V+ A +    M  +  + D  T T +I   C  G    + +A E+  
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSG---KMVEAREMFN 406

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM+ KG +P+  T+T LIDG CK G  ++AF +  ++V+     PNV TYTA+  G CK 
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK-GLTPNVVTYTALADGLCKN 465

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +++ A  LL  M  +GL PN  TY +++ G CK+GN E+   LM+ M   G  P+   Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             ++D  CK G + +A+ELL+    + LQ   +T+ +L++        +    L   M++
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P+   + +L+  +C +  M+ + + ++     G+ P   TY  +I G+ +  N+  
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           A    + M + G +    TY ALI G  K+ K  EA + +E M   G+
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGL 693



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 227/474 (47%), Gaps = 36/474 (7%)

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           ++C    ++ A +VF+E    GVC +  S  +++   C++G+V EA   L  M DRG   
Sbjct: 216 LSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFP 275

Query: 257 DNATLTLLITAFC----------------DKGFR----------------GSIKQAFELL 284
           D  +  ++++ +C                 KG +                G + +A +LL
Sbjct: 276 DVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLL 335

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M + G  P+   +T +I G CK G    A +LF ++ R     P++ TYT++I G CK
Sbjct: 336 RGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM-RRKKIVPDIVTYTSVIHGICK 394

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             KM  A  +   M  +GL P+  TYT+LI G+CK G  + A+ + + M ++G TPN+  
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y A+ DGLCK G +  A ELL +  ++ LQ +  TY  +++   K    +Q + L   M 
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            AG  PD   YTTL+ A+C+  +M ++ +  +  +   L PT  T+  ++ G+   G + 
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE 574

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
              +  + M + G  P+  T+ +L+   C ++ +    + Y++M  +G+ P   T   L 
Sbjct: 575 DGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             +CK  +   A  + + + +K +  T  T   LIR     K+   A   F ++
Sbjct: 635 KGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 184/357 (51%), Gaps = 4/357 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C+LG V  A ++FDEM  + +  D  +Y  ++   C+ G++ EA    + ML +G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T T LI  +C  G    +K+AF +  +MV+KG  PNV T+T L DGLCK G  +
Sbjct: 413 LEPDEVTYTALIDGYCKAG---EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  L  ++ R    +PNV+TY  +++G CK   + +   L+E M   G  P+T TYT+L
Sbjct: 470 VANELLHEMSRK-GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           +  +CK+G   +A++L+ +M  +   P +  +N +++G C  G +++   L++   ++ +
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             +  T+  L+ ++  +   +    ++  M   G+ PD + Y  LI   C+ + MKE+  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             +E +  G   T  TY ++I G+ +      A K F+ M + G   +   Y   + 
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 212/428 (49%), Gaps = 8/428 (1%)

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY-CRMGRVTEADRWLSAMLDRGAI 255
           +  E G V  A+++F ++   GV     S  L +    C    +  A +      + G  
Sbjct: 180 VLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVC 239

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            +  +  +++   C     G +++A  LL +M  +G  P+V ++ V++ G C+ G  +K 
Sbjct: 240 WNTVSCNIVLHCLCQ---LGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKV 296

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            +L  +L +    KP+ + Y  +I   CK  ++  AE LL  M++ G+ P+   YT++I 
Sbjct: 297 LKLVDEL-KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVIS 355

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G CK+GN   A  L D M ++   P+I  Y ++I G+CK G++ EA E+  +   + L+ 
Sbjct: 356 GFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEP 415

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D++TYT L+  + K  E K+A  +  +MV+ GL P++  YT L    C+  ++  + +  
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            E    GL P   TY +++ G  + GNI   VK  + M+  G  PD ITY  L+   CK 
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKM 535

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTV 612
            ++ +A +    M+ K + P  VT   L   +C  G       ++E + +K  +    T 
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF 595

Query: 613 NTLIRKLC 620
           N+L+++ C
Sbjct: 596 NSLMKQYC 603



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 177/368 (48%), Gaps = 4/368 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++S F ++G +     +  EM    +     T   V+   C+ G +  A E+F+EM
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+  D  +Y  ++  YC+ G + EA    + M+ +G   +  T T L    C  G  
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG-- 466

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A ELL EM RKG +PNVYT+  +++GLCK G  E+  +L  ++  +  Y P+  T
Sbjct: 467 -EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY-PDTIT 524

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++  YCK  +M +A  LL  M  + L P   T+  L+ G C  G  E    L++ M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  PN   +N+++   C K  ++   E+ K    R +  D  TY IL+  H K    K
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   MV+ G +     Y  LI  F ++KK  E+ K F+E    GL   K+ Y   +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 515 CGYLRDGN 522
                +GN
Sbjct: 705 DVNYEEGN 712



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 4/301 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G +KE FS+  +M   GL     T   +    C+ G ++ A E+  EM  +G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +V   C++G + +  + +  M   G   D  T T L+ A+C     G + 
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCK---MGEMA 539

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL  M+ K  +P + T  VL++G C  G  E   RL ++ +      PN  T+ ++
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL-IEWMLEKGIMPNATTFNSL 598

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC +  M     + + M ++G++P++NTY  LI GHCK  N + A+ L   M ++G 
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +     Y+A+I G  K+ +  EA +L ++  +  L A+K  Y I +  + ++   +  L 
Sbjct: 659 SVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLE 718

Query: 459 L 459
           L
Sbjct: 719 L 719



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 19/271 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y   A  L  NG  + A+E++  M               V+   +IG +++   ++ EM 
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G    T T   ++   C++G +  A E+   M  + +     ++ +++  +C  G + 
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE 574

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           + +R +  ML++G + +  T   L+  +C    + +++   E+ + M  +G  P+  T+ 
Sbjct: 575 DGERLIEWMLEKGIMPNATTFNSLMKQYC---IKNNMRATTEIYKAMHDRGVMPDSNTYN 631

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +LI G CK    ++A+ L  ++V    Y     TY A+I G+ K +K   A  L E M++
Sbjct: 632 ILIKGHCKARNMKEAWFLHKEMVEK-GYSVTAATYDALIRGFYKRKKFVEARKLFEEMRK 690

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            GL+   + Y   +  + + GN+E   +L D
Sbjct: 691 HGLVAEKDIYDIFVDVNYEEGNWEITLELCD 721


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 219/454 (48%), Gaps = 4/454 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F     V   ++  + ++G L +   +  +M + G+   + TLN ++   C++G +E AE
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + +EM +RG   +  ++  ++   C   R   A R+L  ML R    ++  LT L+   
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +G       A EL   ++ KG+  N+ T   LI GLCK G  ++A RL  K++    +
Sbjct: 534 CKEGKH---SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER-GF 589

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +  TY  +ISG CKE K+     L   M +QG+ P+T TY  LI+G C++G  + A +
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L +        PN+Y Y  +IDG CK  +++E  +L  +   + L+ + + Y  L+  + 
Sbjct: 650 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +   T +A  L   M   G+ P    Y++LI   C   +M++++    E    GL P   
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 769

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT++I GY + G +   V   Q M+     P+ ITY  +I G  K   +  A +    M
Sbjct: 770 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +GKGI P  VT   L   +CK+G      ++ E 
Sbjct: 830 VGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 232/498 (46%), Gaps = 7/498 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G L E F    +M  +G+     T + ++    +L     A  V  E   +G
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +   Y  ++  YC+MG + +A R    M+ +G   ++ TL  +I  FC  G    ++
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG---QME 470

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  +LEEM+ +G+  N    T +I  LC     E A R FL+ +   N +PN    T +
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR-FLREMLLRNMRPNDGLLTTL 529

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE K + A  L  R+ E+G   N  T  +LI+G CK GN + A  L+  M + G 
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   YN +I G CK+G+V+E ++L  +  ++ ++ D  TY +L+    +  +  +A+ 
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+       L P+++ Y  +I  +C+  K++E EK F E +T  L      Y ++I  Y 
Sbjct: 650 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+GN   A K    M   G  P   TY +LI G+C   ++++A    + M  +G+ P  V
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 769

Query: 579 TRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               L   YCK G     + +L+   S D      T   +I        +  AA   H++
Sbjct: 770 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829

Query: 636 LGKDQNVDRVSLAALKNA 653
           +GK    D V+   L N 
Sbjct: 830 VGKGIVPDTVTYNVLTNG 847



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 175/664 (26%), Positives = 284/664 (42%), Gaps = 72/664 (10%)

Query: 47  AFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQID--IDSLTHEQAITVV 104
              S +  PS   +L+K+V S++           S+P   + Q    I  L+  Q  +V 
Sbjct: 102 PLPSQNQPPSSDHALLKSVTSIL-----------SNPSLDSTQCKQLIPHLSPHQFDSVF 150

Query: 105 ASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA 164
            S+        AL+FFY+A     FR  +R Y V   SLI               VS F 
Sbjct: 151 FSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLI---------------VSGFV 195

Query: 165 EIGRLKEGFSMVIEMTNNGLP-LITSTLNRVVGIACELG-LVEYAEE------------- 209
              RL     ++I + +  LP L     NR + IA  +  L E  E              
Sbjct: 196 SPARL-----LLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHV 250

Query: 210 ---------------VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
                          VF  +  +GV     +   ++ +  +   + E   W+   + +G 
Sbjct: 251 YCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANEL-EKSYWVFETMRQGV 309

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D    +  I AFC KG  G ++ A +L  +M + G  PNV T+  LI GLCK G  ++
Sbjct: 310 SPDVYLFSTAINAFC-KG--GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE 366

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           AFR   K+V+ D     + TY+ +I+G  K EK N A  +L+   E+G  PN   Y +LI
Sbjct: 367 AFRFKEKMVK-DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G+CK+GN   A  +   M  +G  PN    N+II G CK G++++A  +L++   R   
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +   +T ++      +  + AL     M+   + P+    TTL+   C++ K  ++ + 
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           +   +  G      T  ++I G  + GN+  AV+  ++M + G   D ITY  LISG CK
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 605

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRT 611
           + K++E  +    M+ +GI P   T   L +  C+ G    A+ +    +S D    + T
Sbjct: 606 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 665

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRI 670
              +I   C   ++      F +LL ++  ++ V    L  A C   N    F       
Sbjct: 666 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 725

Query: 671 AEGI 674
           ++GI
Sbjct: 726 SKGI 729



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    V   ++ ++   G   E F +  +M + G+P  T+T + ++   C +G +E A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           + + DEM   G+  +   Y  ++  YC++G++ +    L  M       +  T T++I  
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           +      G +K A +LL EMV KG  P+  T+ VL +G CK+G  E+ 
Sbjct: 813 YSKS---GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 230/435 (52%), Gaps = 9/435 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++ RL++    + +M + G      T   V+   C    +  A +  +EM  R 
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++   C+ GRV EA   LS M  +  +    T   LI+  C K  R S  
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC-KAERAS-- 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A++LLEEMV  G  P+++T+T LI G CK   ++ A R+F +LV +  ++P+V TY+ +
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV-ARGFRPDVVTYSCL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           I G CKE ++  A  L  RM + G  +PNT TY SLI G C++G  + A +L++ M + G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P++  Y  +++G CK  R+ +AY+LL +  ++ L  D +T+T L+    ++     A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   M +   +P ++ Y T++  +CR  +++E+ KF  E +     P   ++  MI G 
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGL 369

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GISPC 576
            +    S A++  +   +  C PD + Y  +I GLC++ K+DEAC+ Y  M+ + G  P 
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 577 EVTRVTLAYEYCKQG 591
            +T  TL    C  G
Sbjct: 430 SITYSTLITGLCNAG 444



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 218/409 (53%), Gaps = 11/409 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E    + EM N  L     T   ++   C+ G V+ A  +  +M  + V   A +Y 
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C+  R +EA   L  M+  G I D  T T LIT FC          A  + E++
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK---KSDDALRVFEQL 176

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G++P+V T++ LIDGLCK+G  ++A  LF ++++S +  PN  TY ++ISG+C+  K
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A  LLERM E G  P+  TYT+L+ G CK+   + AYDL++ M ++G TP++  + +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++DGLC++ R+ +A  +L +  ++       TY  +L  + +  + ++A      + +  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P++ ++  +I   C+  +  E+ +  +EA      P    YT++I G  R+  +  A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 528 KYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + +++M  + GC P++ITY  LI+GLC    LD A  + E    KG  P
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVP 459



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 222/429 (51%), Gaps = 14/429 (3%)

Query: 214 MCARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           M A   C AD  +Y  ++   C++ R+ +A  +L  M+ +G   D  T T +I A C   
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALC--- 57

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A + LEEM  +   PNV T+TVLIDGLCK G  ++A  L  K+ +     P  
Sbjct: 58  VENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTA 115

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY ++ISG CK E+ + A  LLE M   G +P+  TYT+LI G CK    + A  + + 
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHLKQA 451
           +   G  P++  Y+ +IDGLCK+GR++EA +L  +  +      + +TY  L+S   +  
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A+ L  RM + G +PD+  YTTL+  FC+  ++ ++     +    GL P   T+T
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S++ G  R+  +S AV     M +  C+P   TY  ++ G C+ ++L+EA +F   M+ +
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEE 352

Query: 572 GISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGM 627
              P  V    +     CK   S+ AM ++E   ++     V    T+I  LC EK+V  
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412

Query: 628 AALFFHKLL 636
           A   + K+L
Sbjct: 413 ACRVYRKML 421



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 47/348 (13%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++    + GRLKE                                   A ++F  M   
Sbjct: 190 CLIDGLCKEGRLKE-----------------------------------AIDLFGRMIKS 214

Query: 218 GVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           G C  +  +Y  ++  +CRMG++ EA   L  M + G+  D  T T L+  FC       
Sbjct: 215 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL---AR 271

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A++LL +M RKG  P+V T T L+DGLC++     A  + L  +R  +  P V+TY 
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI-LGEMRRKSCSPTVYTYN 330

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ GYC+  ++  A   +  ++E    PN  ++  +I G CKV     A +L++   + 
Sbjct: 331 TILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQ 455
            C P++  Y  +IDGLC++ +V EA  + +K  +      + ITY+ L++         +
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           A G     ++ G  P+I  Y  LI AF +  + +++ +   + +  G 
Sbjct: 449 ARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 216/443 (48%), Gaps = 4/443 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F     V   ++  + ++G L +   +  +M + G+   + TLN ++   C++G +E AE
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + +EM +RG   +  ++  ++   C   R   A R+L  ML R    ++  LT L+   
Sbjct: 407 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 466

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +G       A EL   ++ KG+  N+ T   LI GLCK G  ++A RL  K++    +
Sbjct: 467 CKEGKH---SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER-GF 522

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +  TY  +ISG CKE K+     L   M +QG+ P+T TY  LI+G C++G  + A +
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 582

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L +        PN+Y Y  +IDG CK  +++E  +L  +   + L+ + + Y  L+  + 
Sbjct: 583 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +   T +A  L   M   G+ P    Y++LI   C   +M++++    E    GL P   
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 702

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT++I GY + G +   V   Q M+     P+ ITY  +I G  K   +  A +    M
Sbjct: 703 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762

Query: 569 IGKGISPCEVTRVTLAYEYCKQG 591
           +GKGI P  VT   L   +CK+G
Sbjct: 763 VGKGIVPDTVTYNVLTNGFCKEG 785



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 232/498 (46%), Gaps = 7/498 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G L E F    +M  +G+     T + ++    +L     A  V  E   +G
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +   Y  ++  YC+MG + +A R    M+ +G   ++ TL  +I  FC  G    ++
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG---QME 403

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  +LEEM+ +G+  N    T +I  LC     E A R FL+ +   N +PN    T +
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR-FLREMLLRNMRPNDGLLTTL 462

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE K + A  L  R+ E+G   N  T  +LI+G CK GN + A  L+  M + G 
Sbjct: 463 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   YN +I G CK+G+V+E ++L  +  ++ ++ D  TY +L+    +  +  +A+ 
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 582

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+       L P+++ Y  +I  +C+  K++E EK F E +T  L      Y ++I  Y 
Sbjct: 583 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+GN   A K    M   G  P   TY +LI G+C   ++++A    + M  +G+ P  V
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 702

Query: 579 TRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               L   YCK G     + +L+   S D      T   +I        +  AA   H++
Sbjct: 703 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762

Query: 636 LGKDQNVDRVSLAALKNA 653
           +GK    D V+   L N 
Sbjct: 763 VGKGIVPDTVTYNVLTNG 780



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 201/401 (50%), Gaps = 10/401 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM S F    R      +     N+GL      L  +VG  C+ G    A E++  +  +
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGL------LTTLVGGLCKEGKHSDAVELWFRLLEK 485

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G  A+  +   ++   C+ G + EA R L  ML+RG +LD  T   LI+  C +G    +
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEG---KV 542

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++ F+L  EMV++G +P+ +T+ +LI G+C+ G  ++A  L+ +  +S +  PNV+TY  
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE-CKSRDLVPNVYTYGV 601

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI GYCK +K+   E L   +  Q L  N+  Y +LI  +C+ GN   A+ L D M  +G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P    Y+++I G+C  GR+++A  L+ +  +  L  + + YT L+  + K  +  + +
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   M    ++P+   YT +I  + +   MK + K   E +  G+ P   TY  +  G+
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            ++G I    K    M+Q G   D ITY  L+ G  + S L
Sbjct: 782 CKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 175/664 (26%), Positives = 284/664 (42%), Gaps = 72/664 (10%)

Query: 47  AFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQID--IDSLTHEQAITVV 104
              S +  PS   +L+K+V S++           S+P   + Q    I  L+  Q  +V 
Sbjct: 35  PLPSQNQPPSSDHALLKSVTSIL-----------SNPSLDSTQCKQLIPHLSPHQFDSVF 83

Query: 105 ASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA 164
            S+        AL+FFY+A     FR  +R Y V   SLI               VS F 
Sbjct: 84  FSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLI---------------VSGFV 128

Query: 165 EIGRLKEGFSMVIEMTNNGLP-LITSTLNRVVGIACELG-LVEYAEE------------- 209
              RL     ++I + +  LP L     NR + IA  +  L E  E              
Sbjct: 129 SPARL-----LLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHV 183

Query: 210 ---------------VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
                          VF  +  +GV     +   ++ +  +   + E   W+   + +G 
Sbjct: 184 YCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANEL-EKSYWVFETMRQGV 242

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D    +  I AFC KG  G ++ A +L  +M + G  PNV T+  LI GLCK G  ++
Sbjct: 243 SPDVYLFSTAINAFC-KG--GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE 299

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           AFR   K+V+ D     + TY+ +I+G  K EK N A  +L+   E+G  PN   Y +LI
Sbjct: 300 AFRFKEKMVK-DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G+CK+GN   A  +   M  +G  PN    N+II G CK G++++A  +L++   R   
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +   +T ++      +  + AL     M+   + P+    TTL+   C++ K  ++ + 
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           +   +  G      T  ++I G  + GN+  AV+  ++M + G   D ITY  LISG CK
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 538

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRT 611
           + K++E  +    M+ +GI P   T   L +  C+ G    A+ +    +S D    + T
Sbjct: 539 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 598

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRI 670
              +I   C   ++      F +LL ++  ++ V    L  A C   N    F       
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 658

Query: 671 AEGI 674
           ++GI
Sbjct: 659 SKGI 662



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 166/334 (49%), Gaps = 4/334 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G ++E   ++ +M   G  L   T N ++   C+ G VE   ++  EM  +G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y L++   CR+G++ EA    +    R  + +  T  ++I  +C       I+
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD---KIE 613

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +L  E++ +  + N   +  LI   C+ G T +AF+L   + RS    P   TY+++
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSL 672

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C   +M  A+ L++ M+++GLLPN   YT+LI G+CK+G  ++  +++  M     
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +IDG  K G ++ A +LL +   + +  D +TY +L +   K+ + ++   
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +   M + GL  D   YTTL+  + +   +   E
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQE 826



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 4/205 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    V   ++ ++   G   E F +  +M + G+P  T+T + ++   C +G +E A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           + + DEM   G+  +   Y  ++  YC++G++ +    L  M       +  T T++I  
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +      G +K A +LL EMV KG  P+  T+ VL +G CK+G  E+ F++    +  + 
Sbjct: 746 YSKS---GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI-CDYMSQEG 801

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAE 352
              +  TYT ++ G+ +   +   E
Sbjct: 802 LPLDEITYTTLVHGWQQPSALTNQE 826


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 233/467 (49%), Gaps = 9/467 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+ E   ++  M   G          ++   C  G ++  +E+FDEM  +G
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+  +Y  +V   CR+G+  EA+  L+AM + G   D  T T LI   C  G      
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG---RAT 336

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL  MV KG +P+  T+ VL+ GLCK+G    AF++ L+++     K +V TY  +
Sbjct: 337 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI-LRMMIEKGKKADVVTYNTL 395

Query: 339 ISGYCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           + G C + K++ A  L   M   E  L PN  T+  LI G CK G   +A  +   M K+
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G   N+  YN ++ G  K G+++EA EL K+        +  TY+IL+    K      A
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GLFC M   GLNP +  Y TL+A+ C++  +++++  FQE   A   P   ++ +MI G
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            L+ G+     +   +M ++G  PD +T+  LI+ L K  +LDEA    E M+  G +P 
Sbjct: 576 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 635

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLC 620
            +   +L      +GD+   + +L  +  K   L  + V+T++  LC
Sbjct: 636 ALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 6/438 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++  FA+  + + GF +V  +   G  +    +N V+   C  G V  A  +  EM 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            + V  D  SY  ++   C+  ++ EA   L  M   G   ++ T T L+   C     G
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKD---G 228

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A ELLE M +KG+  +V  +  LI G C  G  ++   LF +++       NV TY
Sbjct: 229 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML-GKGISANVVTY 287

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + ++ G C+  +   A  +L  M E G+ P+  TYT LI G CK G    A DL++LM +
Sbjct: 288 SCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVE 347

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   YN ++ GLCK+G V +A+++L+   ++  +AD +TY  L+     + +  +
Sbjct: 348 KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 407

Query: 456 ALGLFCRMV--KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           AL LF  M   +  L P++  +  LI   C++ ++ ++ K  ++ +  G      TY  +
Sbjct: 408 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 467

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G L+ G I  A++ ++++  +G  P++ TY  LI G CK   L+ A   +  M   G+
Sbjct: 468 LGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGL 527

Query: 574 SPCEVTRVTLAYEYCKQG 591
           +P      TL    CK+G
Sbjct: 528 NPALFDYNTLMASLCKEG 545



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 249/563 (44%), Gaps = 48/563 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +M  ++      G + E   ++ EM    +     + N ++   C+   ++ A  +  EM
Sbjct: 146 IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A G   ++ +   ++   C+ GR+ EA   L AM  +G   D      LI+ FC+    
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN---N 262

Query: 275 GSIKQAFELLEEMVRKG--------------------WK---------------PNVYTH 299
           G++ +  EL +EM+ KG                    WK               P+V T+
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T LIDGLCK G    A  L L L+     +P+  TY  ++SG CKE  +  A  +L  M 
Sbjct: 323 TGLIDGLCKDGRATHAMDL-LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 381

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEGC-TPNIYAYNAIIDGLCKKGR 417
           E+G   +  TY +L+ G C  G  + A  L + M   E C  PN++ +N +I GLCK+GR
Sbjct: 382 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 441

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A ++ +K  ++    + +TY +LL   LK  + K+A+ L+ +++  G  P+   Y+ 
Sbjct: 442 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 501

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  FC+ + +  ++  F E  T GL P    Y +++    ++G++  A   FQ M    
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C PD I++  +I G  K        +    M+  G+ P  +T  TL     K G+   A 
Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 621

Query: 598 IILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR----VSLAAL 650
             LE +    +       ++L++ L S+          H++  K   +DR      L  L
Sbjct: 622 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681

Query: 651 KNACYESNKYALFSDLSQRIAEG 673
            ++  E +   L     Q  +EG
Sbjct: 682 CHSIQEVDVMELLPTFFQGTSEG 704



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 186/427 (43%), Gaps = 9/427 (2%)

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           + TEA     + LD   +   AT   L+ A       G    AF +   M      P+  
Sbjct: 54  QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYG---LAFSVYRRMTHVDVLPSFG 110

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           + + LI+        +  F + + LV    +  NV     ++ G C+   +  A  L+  
Sbjct: 111 SLSALIECFADAQKPQLGFGV-VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIRE 169

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + + P+  +Y +LI G CK    + A  L+  M   GC PN      ++DGLCK GR
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 229

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA ELL+   ++   AD + Y  L+S         +   LF  M+  G++ ++  Y+ 
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+   CR  + KE+          G+ P   TYT +I G  +DG  + A+     M + G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P N+TY  L+SGLCK+  + +A +    MI KG     VT  TL    C +G    A+
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 598 IILESL-DKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +  S+ D +  +     T N LI  LC E R+  A     K++ K    + V+   L  
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469

Query: 653 ACYESNK 659
            C ++ K
Sbjct: 470 GCLKAGK 476



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 39/351 (11%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+  T   ++    +      A  +  RM    +LP+  + ++LI         +  
Sbjct: 69  NLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLG 128

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + ++ L+ K G T N++  N ++ GLC+ G V EA                         
Sbjct: 129 FGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA------------------------- 163

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
                     +GL   M +  ++PDI +Y TLI   C+ KK+KE+     E   AG FP 
Sbjct: 164 ----------MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 213

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T T+++ G  +DG +  A++  + M + G   D + YG LISG C    LD   + ++
Sbjct: 214 SVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD 273

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
            M+GKGIS   VT   L +  C+ G    A  +L ++ +      + T   LI  LC + 
Sbjct: 274 EMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG 333

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
           R   A    + ++ K +    V+   L +  C E      F  L   I +G
Sbjct: 334 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 36/336 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++    + G++ E   +   M +N   L     T N ++G  C+ G +  A ++  +M  
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD------ 270
           +G C +  +Y +++    + G++ EA      +LD G + ++ T ++LI  FC       
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514

Query: 271 -KGF-------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            KG                           GS++QA  L +EM     +P++ +   +ID
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G  K G  +    L +K+V     +P+  T++ +I+   K  +++ A+  LERM   G  
Sbjct: 575 GTLKAGDFQFVKELQMKMVEM-GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 633

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y SL+ G    G+     +L+  M  +G   +    + I+  LC   +  +  EL
Sbjct: 634 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 693

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           L   FQ   +   I+   LL + L Q+  K  L  F
Sbjct: 694 LPTFFQGTSEGASISCNELLMQ-LHQSHPKLQLHPF 728


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 11/452 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + GV  +  +  +++ ++C + RV  A   L+ +L  G   D  T T LI   C   
Sbjct: 90  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC--- 146

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A  L ++M+ +G++PNV T+  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL-LRSMEQGNCQPDV 205

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             YT++I   CK+ ++  A  L  +M  QG+ P+  TYTSL++  C +  ++    L++ 
Sbjct: 206 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 265

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      P++  ++ ++D LCK+G+V EA+E++    QR ++ D +TYT L+  H  Q+E
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 325

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ +F  MV+ G  PD+ +YTTLI  +C+  K+ ++   F+E       P  +TY +
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 385

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G    G +  A+  F  M   G  PD +TY  L+  LCK   L+EA    +++    
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEKRVGM 627
           ++P       +    C+ G+   A  +  +L  K     +W  T N +I  LC    +  
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVW--TYNIMIHGLCKRGLLNE 503

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           A   F ++ G D + D  +   +     ++N+
Sbjct: 504 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 240/529 (45%), Gaps = 6/529 (1%)

Query: 48  FSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASL 107
           F S+S +    +SL        L S+ +  H+   P  ++    + S+   +  + V SL
Sbjct: 28  FFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSL 87

Query: 108 ANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMVSSFAE 165
           + +  S  V  + +   I    F H  R+ +     + I     +        ++     
Sbjct: 88  STQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCV 147

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
            G++ E   +  +M + G      T   ++   C++G    A  +   M       D   
Sbjct: 148 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 207

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++ + C+  +VTEA    S M+ +G   D  T T L+ A C+       K    LL 
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN---LCEWKHVTTLLN 264

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +MV     P+V   + ++D LCK+G   +A  +   +++    +P+V TYT ++ G+C +
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQ 323

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +M+ A  + + M  +G  P+  +YT+LI G+CK+   ++A  L + M ++   P+   Y
Sbjct: 324 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 383

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ GLC  GR+Q+A  L  +   R    D +TY+ILL    K    ++A+ L   +  
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           + LNPDI  Y  +I   CR  +++ +   F    + GL P+  TY  MI G  + G ++ 
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 503

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           A K F  M+   C+PD  TY  +  G  + ++   A Q  E M+ +G S
Sbjct: 504 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 220/448 (49%), Gaps = 4/448 (0%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++SF  + R+   FS++ ++   G     +T   ++   C  G +  A  +FD+M 
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   +  +Y  ++   C++G  + A R L +M       D    T +I + C      
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR--- 219

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +AF L  +MV +G  P+++T+T L+  LC     +    L  ++V S    P+V  +
Sbjct: 220 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIF 278

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + ++   CKE K+  A  +++ M ++G+ P+  TYT+L+ GHC     + A  + D+M +
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P++ +Y  +I+G CK  ++ +A  L ++  ++E   D  TY  L+         + 
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ LF  MV  G  PD+  Y+ L+ + C+ + ++E+    +    + L P  + Y  +I 
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R G + +A   F  ++  G  P   TY  +I GLCK+  L+EA + +  M G   SP
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL 603
              T  T+A  + +  ++  A+ +LE +
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEM 546



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 8/386 (2%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PNVYT  +LI+  C       AF +  K+++   ++P+  T+T +I G C E K+  
Sbjct: 95  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL-GHQPDPTTFTTLIRGLCVEGKIGE 153

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L ++M ++G  PN  TY +LI G CKVGN   A  L+  M +  C P++  Y +IID
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK  +V EA+ L  +   + +  D  TYT L+       E K    L  +MV + + P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  ++T++ A C++ K+ E+ +     I  G+ P   TYT+++ G+     +  AVK F
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M + G APD I+Y  LI+G CK  K+D+A   +E M  K   P   T  TL Y  C  
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD-RVS 646
           G    A+ +   +  +  +    T + L+  LC  + +  A      +   + N D +V 
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 647 LAALKNACYESNKYA---LFSDLSQR 669
              +   C      A   LFS+LS +
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSK 479



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 178/349 (51%), Gaps = 4/349 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+   V  A  +F +M  +G+  D  +Y  +V A C +         L+ M++  
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            + D    + ++ A C +G    + +A E+++ M+++G +P+V T+T L+DG C +   +
Sbjct: 271 ILPDVVIFSTVVDALCKEG---KVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 327

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++F  +VR   + P+V +YT +I+GYCK  K+++A  L E M  +  +P+T TY +L
Sbjct: 328 EAVKVFDMMVRK-GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           +YG C VG  + A  L   M   G  P++  Y+ ++D LCK   ++EA  LLK      L
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D   Y I++    +  E + A  LF  +   GL+P +  Y  +I   C++  + E+ K
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            F E       P   TY ++  G+L++     A++  + M   G + D+
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 152/362 (41%), Gaps = 73/362 (20%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID-------------- 410
           P+   +  L+    K+ ++     L   M   G  PN+Y  N +I+              
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 411 ---------------------GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
                                GLC +G++ EA  L  K      Q + +TY  L++   K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              T  A+ L   M +    PD+  YT++I + C+ +++ E+   F + +  G+ P   T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 510 YTSMI------CGY-----------------------------LRDGNISSAVKYFQRMN 534
           YTS++      C +                              ++G ++ A +    M 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           Q G  PD +TY  L+ G C QS++DEA + ++ M+ KG +P  ++  TL   YCK     
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 595 TAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            AM + E + +K WI   +T NTL+  LC   R+  A   FH+++ + Q  D V+ + L 
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 652 NA 653
           ++
Sbjct: 423 DS 424



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 3/202 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL  F R++     P I  +  L+ +  + K          +  + G+ P   T   +I
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +     +  A     ++ ++G  PD  T+  LI GLC + K+ EA   ++ MI +G  
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL    CK G+++ A+ +L S+++   +  +    ++I  LC +++V  A   
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
           F +++G+  + D  +  +L +A
Sbjct: 228 FSQMVGQGISPDIFTYTSLVHA 249


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 224/447 (50%), Gaps = 7/447 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+ G V  AE +  ++    +  D  +Y  M++ +CR   +  A +  + M  
Sbjct: 389 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 448

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T + LI   CD G    + +AF+L+ EM+  G  P  +T T  I  LC  G 
Sbjct: 449 EGCEPNTVTYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 505

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A+RLF+ + ++   +PNV+TYTA+ISG C    +  A  L  RM   G+ PNT TY 
Sbjct: 506 YEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI    +    + A+ +++LMG+ G   NI  YN +I G C  G  ++A  ++    QR
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
              A+ +TY  ++  +     T  AL +   M   G  PD  +YT LI  FC+  KM+ +
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E +  GL P + TYT++I GY +D  + +A    + M + GC P+  TY  LI G
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR- 610
           L KQ+    A +  + MI +GI P  VT   +    CK G ++ A+ +   + ++  +  
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKL 635
             T ++LIR L  E +V  A   F +L
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAEL 831



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 228/482 (47%), Gaps = 13/482 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I +G    AH     +++   ++G  ++ + + ++M N G      T   ++   C  G
Sbjct: 481 MILHGILPTAHTCTGPIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 539

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L++ A  +F  M   GV  +  +Y  ++       R+  A   L+ M   G   +  T  
Sbjct: 540 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYN 599

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  +C     G  K+A  ++  M+++G   N+ T+  +I G C  G T  A R+ L L
Sbjct: 600 EMIKGYC---ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI-LDL 655

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R    KP+  +YT +I G+CK  KM  A  L   M + GL PN  TYT+LI G+CK   
Sbjct: 656 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L++ M + GC PN+  YN +I GL K+     A EL K   +  +  + +TYT 
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 775

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K   T  AL +F +M++ G  P++  Y++LI A  ++ K++E+E  F E    G
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P + TY  MI  Y+  G +  A  +  RM + GC P   TYG LI GL  +  L  A 
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL--AD 893

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           Q   ++      P  V   +  Y+   Q   +     L  LD  L ++  N L+  L + 
Sbjct: 894 QRLAAL------PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTA 947

Query: 623 KR 624
            R
Sbjct: 948 GR 949



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 215/459 (46%), Gaps = 46/459 (10%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A +VF++M   G   +  +Y  ++   C  GRV EA   +  M+  G +    T T 
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I A CD    G  + A+ L  +M  KG +PNVYT+T LI GLC  G  + A  LF ++ 
Sbjct: 496 PIIALCDM---GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552

Query: 324 RSDNYKPNVHTYTA-----------------------------------MISGYCKEEKM 348
           R D   PN  TY A                                   MI GYC     
Sbjct: 553 R-DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A +++  M ++G   N  TY ++I G+C  GN   A  ++DLM   GC P+ ++Y  +
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G CK  +++ A+ L  +     L  +++TYT L+  + K  +   A  L   M ++G 
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P++  Y  LI    +Q     +E+  +  I  G+FP   TYT+MI G  ++G+ S A++
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F +M + GC P+ +TY +LI  L ++ K++EA   +  +   G+ P E+T V +   Y 
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 589 KQGDSATAMIILESLDK-----KLWIRTVNTLIRKLCSE 622
             G    A   L  + K      LW  T   LI+ L +E
Sbjct: 852 MSGKVEHAFNFLGRMIKAGCQPTLW--TYGVLIKGLKNE 888



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 233/528 (44%), Gaps = 67/528 (12%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++   E  R+K  F ++  M  NGL     T N ++   C LG  + A  V + M  RG
Sbjct: 566  LINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              A+  +Y  ++  YC  G  T A R L  M D G   D  + T LI  FC       ++
Sbjct: 626  HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS---KME 682

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             AF L  EMV  G  PN  T+T LIDG CK    + A  L   + RS   +PNV TY  +
Sbjct: 683  SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVL 741

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G  K+   + AE L + M E+G+ PN  TYT++I G CK G+   A ++ + M ++GC
Sbjct: 742  IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 399  TPNIYAYNAIIDGLCKKGRVQEA-----------------------------------YE 423
             PN+  Y+++I  L ++G+V+EA                                   + 
Sbjct: 802  LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861

Query: 424  LLKKAFQRELQADKITYTILL----SEHL-------------------KQAETKQALGLF 460
             L +  +   Q    TY +L+    +E+L                    Q   + A+ + 
Sbjct: 862  FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM 921

Query: 461  CRMVKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               + A L+P   +     L++      +  E+ +     I+ GL P +E Y S++C  L
Sbjct: 922  SAKL-AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 980

Query: 519  RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            R  N+  A+  F+ M+  GC      Y  LI  LC+  +  EA   +E+M+ +  +P +V
Sbjct: 981  RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 1040

Query: 579  TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT--VNTLIRKLCSEKR 624
             +  L     + G     M  L  ++ + ++ +  + T++ +  S+KR
Sbjct: 1041 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 1088



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 22/363 (6%)

Query: 318 LFLKLVRSDNYKPNVHTYTA------------------MISGYCKEEKMNRAEMLLERMK 359
           LFL   RS +Y+P      A                  +I     +E M R    L+ + 
Sbjct: 283 LFLSRERSHSYRPGTFAALARRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLS 342

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + GL      Y++L+    ++G      D    M  EG  PN+  YNA+I+ LCK G V 
Sbjct: 343 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 402

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  ++KK F+ E+  D  TYT ++  H ++ +   AL +F +M K G  P+   Y+TLI
Sbjct: 403 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 462

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   ++ E+    +E I  G+ PT  T T  I      G    A + F  M   GC 
Sbjct: 463 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 522

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+  TY ALISGLC    L  A   +  M   G+ P  VT   L     +      A ++
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACY 655
           L  + +      I T N +I+  C       A L  + +L +  + + V+    +K  C 
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642

Query: 656 ESN 658
             N
Sbjct: 643 SGN 645



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 3/156 (1%)

Query: 154  EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +V   +VS+ +  GR  E   ++  M + GL       N ++     +  V+ A  VF  
Sbjct: 935  QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 994

Query: 214  MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
            M  +G     + YK ++ A C++ R  EA      ML R    D+    +LI      G+
Sbjct: 995  MSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGY 1054

Query: 274  RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +       E L  M  + + P+ + +T+L     KK
Sbjct: 1055 K---DLCMEFLHIMETRRYMPSFHIYTILAREASKK 1087


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 214/407 (52%), Gaps = 4/407 (0%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G +E A ++  EM  +G      +Y +++ A C +G   +A + L  M  +  + + 
Sbjct: 276 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 335

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI   C +G    I++A  +  +M++ G  P + T   LI+G CK+GW   AF+L
Sbjct: 336 HTYTILIDRLCREG---KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++   N KPN+ TY  ++ G C+  K  +A +LL R+ + GLLP+  TY  L+ G C
Sbjct: 393 -LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 451

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A+++ + M   G  P+ + + A+IDGLCK GR+++A  +L    ++ +  D++
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 511

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+T L+  H K  + K    LF  MV+       H +   + A  +  K+ E+     + 
Sbjct: 512 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 571

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  GL P+  T+T +I G+ R G  + ++K  +RM Q GC+P+  TY  +I+GLC   ++
Sbjct: 572 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 631

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           +EA     SM   G+SP   T   L   + K G    A  I+ ++ K
Sbjct: 632 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 678



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 4/417 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E GRL+E F +  EM   G    T T   ++   C++G+ + A ++ DEM  + 
Sbjct: 271 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G++ EA+     ML  G      T   LI  +C +G+   + 
Sbjct: 331 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW---VV 387

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+LL  M +   KPN+ T+  L++GLC+   + KAF L L+ V  +   P+  TY  +
Sbjct: 388 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF-LLLRRVVDNGLLPDRVTYNIL 446

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CKE ++N A  +   M   GL P+  T+T+LI G CK+G  E+A  ++  M K+G 
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +   + A+IDG CK G+ ++   L +   +        T+   L    K  +  +A  
Sbjct: 507 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 566

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M+K GL P +  +T LI   CR  +   S K  +    AG  P   TYT +I G  
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 626

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +G +  A      M+  G +P++ TY  L+    K  +LD A Q   +M+  G  P
Sbjct: 627 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 683



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           LM +A   MG V  A      M++ G +L       ++ A C  GF   ++ A     ++
Sbjct: 166 LMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF---VQAAEMFCCKV 220

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +R G+  + +  T L+   C++    +AFR+F K+ + +N +PN  TY+ +I G C+  +
Sbjct: 221 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 280

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  L + M E+G  P+T TYT LI   C +G  ++A  ++D M  + C PN++ Y  
Sbjct: 281 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 340

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +ID LC++G+++EA  + +K  +  L    IT+  L++ + K+     A  L   M K  
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  Y  L+   CR  K  ++    +  +  GL P + TY  ++ G+ ++G ++ A 
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  MN  G  PD  T+ ALI GLCK  +L++A     SM+ KGIS  EVT   L   +
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTL 615
           CK G +     + E++ +   + T +T 
Sbjct: 521 CKIGKAKDVCFLFENMVENRCLTTAHTF 548



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 209/507 (41%), Gaps = 95/507 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +IG   +   M+ EM          T   ++   C  G +E A  VF +M   G
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM----------------------------- 249
           +C    ++  ++  YC+ G V  A + LS M                             
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 425

Query: 250 ------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                 +D G + D  T  +L+  FC +G    +  AF +   M   G +P+ +T T LI
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEG---QLNMAFNIFNSMNSAGLEPDGFTFTALI 482

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK------------------- 344
           DGLCK G  E+A  +   +V+       V T+TA+I G+CK                   
Sbjct: 483 DGLCKLGRLEQANGILGSMVKKGISLDEV-TFTALIDGHCKIGKAKDVCFLFENMVENRC 541

Query: 345 ----------------EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
                           + K+N A  +L +M + GL+P+  T+T LI GHC+ G    +  
Sbjct: 542 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 601

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +++ M + GC+PN+Y Y  II+GLC  GRV+EA  +L       +  +  TY +L+  H+
Sbjct: 602 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 661

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF-------------------CRQKKMK 489
           K     +A  +   MVK G  P+ H Y+ L++ F                    R    +
Sbjct: 662 KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 721

Query: 490 ESE-KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           E++       I     PT++ Y  ++ G  ++G I  A +  Q M + G  PD     ++
Sbjct: 722 ENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSI 780

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISP 575
           I   CK  K D   +F + ++     P
Sbjct: 781 IEHYCKTCKYDNCLEFMKLVLDNKFVP 807



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 208/460 (45%), Gaps = 49/460 (10%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           S++  GN +        ++     + +  + F ++  + +NGL     T N +V   C+ 
Sbjct: 394 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 453

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +  A  +F+ M + G+  D  ++  ++   C++GR+ +A+  L +M+ +G  LD  T 
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 513

Query: 262 TLLITAFCDKGFRGSIKQAFE--------------------------------LLEEMVR 289
           T LI   C  G    +   FE                                +L +M++
Sbjct: 514 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 573

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  P+V THT+LI+G C+ G T  + ++ L+ ++     PNV+TYT +I+G C   ++ 
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKM-LERMKQAGCSPNVYTYTIIINGLCNNGRVE 632

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE +L  M   G+ PN  TY  L+  H K G  +RA+ ++  M K GC PN + Y+A++
Sbjct: 633 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G          + L   A    + A  ++ T  L      +E      L   + K G+ 
Sbjct: 693 SG----------FVLSNTA----IGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV- 737

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P    Y  L+   C++ ++ E+++  Q+ +  GLFP K   +S+I  Y +     + +++
Sbjct: 738 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEF 796

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + +      P   +Y  +I GL  + ++ EA +    ++
Sbjct: 797 MKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 836



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 5/325 (1%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ M E G   +   Y++L+    K+     A+ +   M  EG       Y  +++ LCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIH 473
            G VQ A     K  +     D    T L+  + ++ +  +A  +F +M K     P+  
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+ LI   C   +++E+ +  QE +  G  P+  TYT +I      G    A+K    M
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
               C P+  TY  LI  LC++ K++EA   +  M+  G+ P  +T   L   YCK+G  
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +A  +L  ++K   K  IRT N L+  LC   +   A L   +++      DRV+   L
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 651 KNA-CYESNKYALFSDLSQRIAEGI 674
            +  C E      F+  +   + G+
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGL 471



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 35/379 (9%)

Query: 98  EQAITVVASLANEAGSMVALSFF-----YWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
           EQA  ++ S+  +  S+  ++F      +  IG AK   F+        +++ N     A
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL------FENMVENRCLTTA 545

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H    C + +  +  +L E  +M+ +M   GL     T   ++   C  G    + ++ +
Sbjct: 546 H-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 604

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G   +  +Y +++   C  GRV EA+  L +M   G   ++ T  +L+ A    G
Sbjct: 605 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 664

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF---------LKLV 323
               + +AF+++  MV+ G +PN + ++ L+ G         A  L          L   
Sbjct: 665 ---RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 721

Query: 324 RSDNY----------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            +DN            P    Y  ++ G CKE ++  A+ L + M + GL P+    +S+
Sbjct: 722 ENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSI 780

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  +CK   ++   + M L+      P+  +Y  +I GL  +GRVQEA +L+    +   
Sbjct: 781 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 840

Query: 434 QADKITYTILLSEHLKQAE 452
             +++  T  +   +K+ E
Sbjct: 841 IEEEVEVTPSIEFLMKEEE 859


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 217/428 (50%), Gaps = 20/428 (4%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L+E AE+ + EM   GV  +  +        C  G+  +A   +  M+ +G + D++T +
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   CD      +++AF L EEM + G  P+VYT+T+LID  CK G  ++A   F ++
Sbjct: 458 KVIGFLCDAS---KVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R DN  PNV TYT++I  Y K  K+  A  L E M  +G  PN  TYT+LI GHCK G 
Sbjct: 515 LR-DNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQ 573

Query: 383 FERA---------------YDLMDLMGKEGC-TPNIYAYNAIIDGLCKKGRVQEAYELLK 426
            ++A                D+   +    C TPNI  Y A++DGLCK  RV+EA+ELL 
Sbjct: 574 IDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLD 633

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                  + ++I Y  L+    K  + + A  +F +M + G  P+++ Y++LI +  ++K
Sbjct: 634 TMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEK 693

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++    K   + +     P    YT MI G  + G    A +   +M ++GC P+ ITY 
Sbjct: 694 RLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYT 753

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           A+I G  K  K+++  + Y  M  KG +P  +T   L    C  G    A  +L+ + + 
Sbjct: 754 AMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQT 813

Query: 607 LWIRTVNT 614
            W R +++
Sbjct: 814 YWPRHISS 821



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 230/536 (42%), Gaps = 98/536 (18%)

Query: 160 VSSFAEI----GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VS+FA      G+  + F ++ EM + G     ST ++V+G  C+   VE A  +F+EM 
Sbjct: 421 VSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMK 480

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+     +Y +++ ++C+ G + +A  W   ML      +  T T LI A+       
Sbjct: 481 KNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKAR--- 537

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA---------------FRLFL 320
            +  A +L E M+ +G KPNV T+T LIDG CK G  +KA                 ++ 
Sbjct: 538 KVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYF 597

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           KL  +D   PN+ TY A++ G CK  ++  A  LL+ M   G  PN   Y +LI G CK 
Sbjct: 598 KLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKT 657

Query: 381 GNFERAYDLMDLMGKEG-----------------------------------CTPNIYAY 405
           G  E A ++   M + G                                   CTPN+  Y
Sbjct: 658 GKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIY 717

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             +IDGLCK G+ +EAY L+ K  +     + ITYT ++    K  + +Q L L+  M  
Sbjct: 718 TDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCS 777

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKES-----------------------EKFFQEAITA- 501
            G  P+   Y  LI   C    + E+                       E F +E IT+ 
Sbjct: 778 KGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSI 837

Query: 502 GLF---------PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP-----DNITYGA 547
           GL          P +  Y  +I  +++ G +  A+   +   +I  +P     +   Y +
Sbjct: 838 GLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLE---EISSSPSLAVANKYLYTS 894

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           LI  L   SK+D+A + Y SMI K + P   T V L     + G    A+ + +S+
Sbjct: 895 LIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/527 (22%), Positives = 219/527 (41%), Gaps = 93/527 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL--------------------------- 191
           ++  F    +L   F +  EM+N+G  +   TL                           
Sbjct: 211 LIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVP 270

Query: 192 -----NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
                NR+V   CE  L + A ++ D M +     +  +Y++++      G++    R L
Sbjct: 271 DTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRIL 330

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           S M+  G   +      L+ A+C          A++L ++M++ G +P    + + I  +
Sbjct: 331 SMMMTEGCYPNREMFNSLVHAYCKS---RDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSI 387

Query: 307 C--------------KKGWTE---------------------------KAFRLFLKLVRS 325
           C              +K ++E                           KAF +  +++ S
Sbjct: 388 CSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM-S 446

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
             + P+  TY+ +I   C   K+ +A +L E MK+ G++P+  TYT LI   CK G  ++
Sbjct: 447 KGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQ 506

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +  D M ++ CTPN+  Y ++I    K  +V +A +L +       + + +TYT L+ 
Sbjct: 507 ARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALID 566

Query: 446 EHLKQAETKQALGLFCRM------------VKAGLN----PDIHAYTTLIAAFCRQKKMK 489
            H K  +  +A  ++ RM             K   N    P+I  Y  L+   C+  +++
Sbjct: 567 GHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVE 626

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ +        G  P +  Y ++I G+ + G + +A + F +M++ G  P+  TY +LI
Sbjct: 627 EAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLI 686

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           + L K+ +LD   +    M+    +P  V    +    CK G +  A
Sbjct: 687 NSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 185/465 (39%), Gaps = 75/465 (16%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF--CDKGFRGSIKQAFELLEEMVRKG 291
           CR G    A   L  + D G      T   LI  F   DK     +  AF +  EM   G
Sbjct: 181 CRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADK-----LDTAFLVHREMSNSG 235

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           ++ +  T       LCK G    A    L L+  + + P+   Y  M+SG C+      A
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDA----LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEA 291

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +L+RM+    +PN  TY  L+ G    G   R   ++ +M  EGC PN   +N+++  
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA 351

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILL-----------SEHLKQAET------- 453
            CK      AY+L KK  +   Q   + Y I +           S+ L+ AE        
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLD 411

Query: 454 -----------------------KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                                   +A  + C M+  G  PD   Y+ +I   C   K+++
Sbjct: 412 LGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEK 471

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   F+E    G+ P+  TYT +I  + + G I  A  +F  M +  C P+ +TY +LI 
Sbjct: 472 AFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIH 531

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII-------LESL 603
              K  K+ +A + +E M+ +G  P  VT   L   +CK G    A  I       +ES 
Sbjct: 532 AYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESS 591

Query: 604 DKKLWIR------------TVNTLIRKLCSEKRVGMAALFFHKLL 636
           D  ++ +            T   L+  LC   RV  A    H+LL
Sbjct: 592 DIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA----HELL 632



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 23/360 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWT-EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           G+      +  LI+ LC      ++    FL  +R D+ +        +I   C+    N
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWN 187

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK-----EGCTPNIYA 404
            A   L R+K+ G   +  TY +LI    +    + A+ +   M       +GCT   +A
Sbjct: 188 VALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFA 247

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+     LCK GR  +A  LL+K    E   D + Y  ++S   + +  ++A+ +  RM 
Sbjct: 248 YS-----LCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMR 299

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
                P++  Y  L++    + ++   ++     +T G +P +E + S++  Y +  + S
Sbjct: 300 SISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYS 359

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEV 578
            A K F++M + GC P  + Y   I  +C   +      L+ A + Y  M+  G+   +V
Sbjct: 360 YAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKV 419

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKL 635
                A   C  G    A  I+  +  K ++    T + +I  LC   +V  A L F ++
Sbjct: 420 NVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEM 479


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 214/407 (52%), Gaps = 4/407 (0%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G +E A ++  EM  +G      +Y +++ A C +G   +A + L  M  +  + + 
Sbjct: 253 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 312

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI   C +G    I++A  +  +M++ G  P + T   LI+G CK+GW   AF+L
Sbjct: 313 HTYTILIDRLCREG---KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++   N KPN+ TY  ++ G C+  K  +A +LL R+ + GLLP+  TY  L+ G C
Sbjct: 370 -LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 428

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A+++ + M   G  P+ + + A+IDGLCK GR+++A  +L    ++ +  D++
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+T L+  H K  + K    LF  MV+       H +   + A  +  K+ E+     + 
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  GL P+  T+T +I G+ R G  + ++K  +RM Q GC+P+  TY  +I+GLC   ++
Sbjct: 549 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 608

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           +EA     SM   G+SP   T   L   + K G    A  I+ ++ K
Sbjct: 609 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 655



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 4/417 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E GRL+E F +  EM   G    T T   ++   C++G+ + A ++ DEM  + 
Sbjct: 248 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G++ EA+     ML  G      T   LI  +C +G+   + 
Sbjct: 308 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW---VV 364

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+LL  M +   KPN+ T+  L++GLC+   + KAF L L+ V  +   P+  TY  +
Sbjct: 365 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF-LLLRRVVDNGLLPDRVTYNIL 423

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CKE ++N A  +   M   GL P+  T+T+LI G CK+G  E+A  ++  M K+G 
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +   + A+IDG CK G+ ++   L +   +        T+   L    K  +  +A  
Sbjct: 484 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 543

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M+K GL P +  +T LI   CR  +   S K  +    AG  P   TYT +I G  
Sbjct: 544 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 603

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +G +  A      M+  G +P++ TY  L+    K  +LD A Q   +M+  G  P
Sbjct: 604 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 660



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           LM +A   MG V  A      M++ G +L       ++ A C  GF   ++ A     ++
Sbjct: 143 LMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF---VQAAEMFCCKV 197

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +R G+  + +  T L+   C++    +AFR+F K+ + +N +PN  TY+ +I G C+  +
Sbjct: 198 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 257

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  L + M E+G  P+T TYT LI   C +G  ++A  ++D M  + C PN++ Y  
Sbjct: 258 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 317

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +ID LC++G+++EA  + +K  +  L    IT+  L++ + K+     A  L   M K  
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  Y  L+   CR  K  ++    +  +  GL P + TY  ++ G+ ++G ++ A 
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  MN  G  PD  T+ ALI GLCK  +L++A     SM+ KGIS  EVT   L   +
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTL 615
           CK G +     + E++ +   + T +T 
Sbjct: 498 CKIGKAKDVCFLFENMVENRCLTTAHTF 525



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 215/503 (42%), Gaps = 78/503 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +IG   +   M+ EM          T   ++   C  G +E A  VF +M   G
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM----------------------------- 249
           +C    ++  ++  YC+ G V  A + LS M                             
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 402

Query: 250 ------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                 +D G + D  T  +L+  FC +G    +  AF +   M   G +P+ +T T LI
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEG---QLNMAFNIFNSMNSAGLEPDGFTFTALI 459

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK------------------- 344
           DGLCK G  E+A  +   +V+       V T+TA+I G+CK                   
Sbjct: 460 DGLCKLGRLEQANGILGSMVKKGISLDEV-TFTALIDGHCKIGKAKDVCFLFENMVENRC 518

Query: 345 ----------------EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
                           + K+N A  +L +M + GL+P+  T+T LI GHC+ G    +  
Sbjct: 519 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 578

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +++ M + GC+PN+Y Y  II+GLC  GRV+EA  +L       +  +  TY +L+  H+
Sbjct: 579 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 638

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLFPTK 507
           K     +A  +   MVK G  P+ H Y+ L++ F        +        + A    ++
Sbjct: 639 KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 698

Query: 508 ETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           E   + +  ++ R  ++  A+K    + + G  P    Y  L+ GLCK+ ++ EA Q  +
Sbjct: 699 ENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQ 757

Query: 567 SMIGKGISPCEVTRVTLAYEYCK 589
            M+  G+ P +     + + YCK
Sbjct: 758 DMVKHGLFPDKAISSIIEH-YCK 779



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 210/462 (45%), Gaps = 37/462 (8%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           S++  GN +        ++     + +  + F ++  + +NGL     T N +V   C+ 
Sbjct: 371 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 430

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +  A  +F+ M + G+  D  ++  ++   C++GR+ +A+  L +M+ +G  LD  T 
Sbjct: 431 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 490

Query: 262 TLLITAFCDKGFRGSIKQAFE--------------------------------LLEEMVR 289
           T LI   C  G    +   FE                                +L +M++
Sbjct: 491 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 550

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  P+V THT+LI+G C+ G T  + ++ L+ ++     PNV+TYT +I+G C   ++ 
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKM-LERMKQAGCSPNVYTYTIIINGLCNNGRVE 609

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE +L  M   G+ PN  TY  L+  H K G  +RA+ ++  M K GC PN + Y+A++
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669

Query: 410 DGLCKKGRVQEAYELLKKA--FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
            G         A  L        R L +++     L S   +  +   AL +   + K G
Sbjct: 670 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 729

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P    Y  L+   C++ ++ E+++  Q+ +  GLFP K   +S+I  Y +     + +
Sbjct: 730 V-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCL 787

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           ++ + +      P   +Y  +I GL  + ++ EA +    ++
Sbjct: 788 EFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 5/325 (1%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ M E G   +   Y++L+    K+     A+ +   M  EG       Y  +++ LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIH 473
            G VQ A     K  +     D    T L+  + ++ +  +A  +F +M K     P+  
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+ LI   C   +++E+ +  QE +  G  P+  TYT +I      G    A+K    M
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
               C P+  TY  LI  LC++ K++EA   +  M+  G+ P  +T   L   YCK+G  
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +A  +L  ++K   K  IRT N L+  LC   +   A L   +++      DRV+   L
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423

Query: 651 KNA-CYESNKYALFSDLSQRIAEGI 674
            +  C E      F+  +   + G+
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGL 448



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 53/396 (13%)

Query: 98  EQAITVVASLANEAGSMVALSFF-----YWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
           EQA  ++ S+  +  S+  ++F      +  IG AK   F+        +++ N     A
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL------FENMVENRCLTTA 522

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H    C + +  +  +L E  +M+ +M   GL     T   ++   C  G    + ++ +
Sbjct: 523 H-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 581

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G   +  +Y +++   C  GRV EA+  L +M   G   ++ T  +L+ A    G
Sbjct: 582 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 641

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG------------LCKKG---------- 310
               + +AF+++  MV+ G +PN + ++ L+ G            L   G          
Sbjct: 642 ---RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 698

Query: 311 ------WTEKAFRLF-----LKLVRSDNYKPNVHT---YTAMISGYCKEEKMNRAEMLLE 356
                  +   FRL      LK +R +  K  V T   Y  ++ G CKE ++  A+ L +
Sbjct: 699 ENDNNCLSSHVFRLMDVDHALK-IRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQ 757

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M + GL P+    +S+I  +CK   ++   + M L+      P+  +Y  +I GL  +G
Sbjct: 758 DMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 816

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           RVQEA +L+    +     +++  T  +   +K+ E
Sbjct: 817 RVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEE 852


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 260/549 (47%), Gaps = 37/549 (6%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           ++A+ VV  +  E G  +    + + +      + ++L  +  + ++S G  +       
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRG-IKPDVTTFN 215

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++ +     +++    M+ EM + GL     T   ++    E G +  A  + ++M A 
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G  +   +  ++V  YC+ GR+ E   ++  M + G   D  T   L+   C  G    +
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG---HV 332

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A E+L+ M+++G+ P+++T+  LI GLCK G  E+A  +  +++  D + PN  TY  
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD-FSPNTVTYNT 391

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +IS  CKE ++  A  L   +  +G+LP+  T+ SLI G C   N   A +L + M  +G
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P+ + YN +ID LC +GR++EA  LLK+        + +TY  L+    K    ++A 
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M   G++ ++  Y TLI   C+ ++++E+ +   + +  GL P K TY S++  +
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G+I  A    Q M   GC PD++TYG LI GL K  +++ A +   ++  KG+    
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV--- 628

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
                                        L  +T N +I+ L  EKR   A   F +++ 
Sbjct: 629 -----------------------------LAPQTYNPVIKALFREKRTSEAVRLFREMME 659

Query: 638 KDQNVDRVS 646
           K    D V+
Sbjct: 660 KGDPPDAVT 668



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 169/640 (26%), Positives = 280/640 (43%), Gaps = 71/640 (11%)

Query: 34  THHHNFLANSKQPAFSSTSSSPSP--PQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQID 91
           THHH+  A S  P+FS+ S SP+   PQ+                  LR +   L  Q D
Sbjct: 43  THHHDQQAVS--PSFSTLSPSPTTQLPQNFTPK-------------QLRDA---LRRQSD 84

Query: 92  IDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER 151
            DS+                     L    WA     F     +Y      L  +G+F  
Sbjct: 85  EDSI---------------------LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGS 123

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
              V+Q M  +  EI R   G  +++  +     L    +           +V+  EE F
Sbjct: 124 MRRVLQEMKHTGCEIRR---GTFLILIESYAKFELFDEAV----------AVVDIMEEEF 170

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
                 G+  DA +Y  ++       ++   +   S M+ RG   D  T  +LI A C  
Sbjct: 171 ------GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRA 224

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                I+ A  ++EEM   G  P+  T T L+ G  ++G    A R+  ++V +     N
Sbjct: 225 H---QIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T   ++ GYCKE ++      ++ M  +G  P+  T+ SL+ G C++G+ + A +++D
Sbjct: 282 V-TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           +M +EG  P+I+ YN++I GLCK G V+EA E+L +   R+   + +TY  L+S   K+ 
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + ++A  L   +   G+ PD+  + +LI   C     + + + F+E  T G  P + TY 
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I      G +  A+   + M   GC+ + +TY  LI G CK  +++EA + ++ M  +
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520

Query: 572 GISPCEVTRVTLAYEYCKQ---GDSATAM--IILESLDKKLWIRTVNTLIRKLCSEKRVG 626
           GIS   VT  TL    CK     ++A  M  +++E L    +  T N+L+   C    + 
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF--TYNSLLTYFCRAGDIK 578

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            AA     +       D V+   L     ++ +  L S L
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 198/433 (45%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F E G +     +  +M   G P    T+N +V   C+ G +E      DEM   G
Sbjct: 252 LMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG 311

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  +V   CR+G V  A   L  ML  G   D  T   LI   C     G ++
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK---LGEVE 368

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+L +M+ + + PN  T+  LI  LCK+   E+A  L  +++ S    P+V T+ ++
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSL 427

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C       A  L E MK +G  P+  TY  LI   C  G  E A  L+  M   GC
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + N+  YN +IDG CK  R++EA E+  +   + +  + +TY  L+    K    ++A  
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  GL PD   Y +L+  FCR   +K++    Q   + G  P   TY ++I G  
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A +  + +   G      TY  +I  L ++ +  EA + +  M+ KG  P  V
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667

Query: 579 TRVTLAYEYCKQG 591
           T   +    C  G
Sbjct: 668 TYKVVFRGLCSGG 680



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 193/417 (46%), Gaps = 5/417 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +SN  F         +V+    IG +K    ++  M   G      T N ++   C+LG 
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           VE A E+ ++M  R    +  +Y  ++   C+  +V EA      +  +G + D  T   
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C      + + A EL EEM  KG  P+ +T+ +LID LC +G  E+A  L LK +
Sbjct: 427 LIQGLC---LTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL-LKEM 482

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S     NV TY  +I G+CK +++  AE + + M+ QG+  N  TY +LI G CK    
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E A  LMD M  EG  P+ + YN+++   C+ G +++A ++++       + D +TY  L
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K    + A  L   +   G+      Y  +I A  R+K+  E+ + F+E +  G 
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662

Query: 504 FPTKETYTSMICGYLRDGN-ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            P   TY  +  G    G  I  AV +   M   G  PD  ++  L  GLC  S  D
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMED 719



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 5/200 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G +K+   +V  MT+NG    + T   ++    + G VE A  +   +  +G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ A  R  R +EA R    M+++G   D  T  ++    C  G  G I 
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG--GPIG 684

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L EM  KG+ P+  +  +L +GLC     +   +L  ++++  N+     +  +M
Sbjct: 685 EAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFS---DSEVSM 741

Query: 339 ISGYCKEEKMNRAEMLLERM 358
           I G+ K  K   A   L R+
Sbjct: 742 IMGFLKIRKFQDALATLGRI 761


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 239/494 (48%), Gaps = 6/494 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G +   F +V ++   G+       N ++   C+ G ++ AE +F+ M  +G
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ ++C+ G++  A  +L  M + G        + LI+  C     G ++
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK---LGKLR 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM+  G KPNV  +T LI G CK+G    AFRL+ ++       PN +T+TA+
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT-GKGISPNTYTFTAL 501

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C   +M  A  L   M E  ++PN  TY  LI GHCK GN  RA++L+D M ++G 
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y  +I GLC  GRV EA E +      + + +++ ++ LL  + K+     AL 
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M+  G+  D+  Y+ LI    RQ+  +      ++    GL P    YT+MI    
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A   +  M   GC P+ +TY ALI+GLCK   +D+A      M+     P + 
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLL 636
           T          +G+   A+ + + L +     TV  N LIR  C   R+  AA     ++
Sbjct: 742 TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 801

Query: 637 GKDQNVDRVSLAAL 650
               + D +S + +
Sbjct: 802 DSGISPDCISYSTI 815



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 229/484 (47%), Gaps = 40/484 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++S  + G+L E  S+   M + GL     T + ++   C+ G ++ A     +M
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+ A    Y  ++  +C++G++  A      M+  G   +    T LI+ +C +   
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE--- 473

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +  AF L  EM  KG  PN YT T LI GLC      +A +LF ++V   N  PN  T
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEW-NVIPNEVT 532

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G+CKE    RA  LL+ M E+GL+P+T TY  LI G C  G    A + M+ + 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAY-------------------------------- 422
            E    N   ++A++ G CK+GR+ +A                                 
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652

Query: 423 ---ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
              +LLK+   + L+ D + YT ++  + K    K A GL+  MV  G  P++  YT LI
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C+   M ++E   +E + +   P + TY   +     +GNI  A++    + + G  
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFL 771

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            + +TY  LI G CK  ++ EA +   +MI  GISP  ++  T+ YEYC++GD   A+ +
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831

Query: 600 LESL 603
            ES+
Sbjct: 832 WESM 835



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 229/465 (49%), Gaps = 40/465 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   ++G+L+   S+  EM  NGL         ++   C+ G +  A  ++ EM  +G
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C   R+ EA++    M++   I +  T  +LI   C +G   +  
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG---NTV 547

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFELL+EMV KG  P+ YT+  LI GLC  G   +A R F+  ++ +  K N   ++A+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA-REFMNDLQGEQQKLNEMCFSAL 606

Query: 339 ISGYCKEEKMNRA-----EML------------------------------LERMKEQGL 363
           + GYCKE +++ A     EML                              L++M +QGL
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL 666

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   YT++I  + K GN + A+ L D+M  EGC PN+  Y A+I+GLCK G + +A  
Sbjct: 667 RPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAEL 726

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++        ++ TY   L     +   ++A+ L   +++ G   +   Y  LI  FC
Sbjct: 727 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFC 785

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  +++E+ +     I +G+ P   +Y+++I  Y R G++  A+K ++ M   G  PD +
Sbjct: 786 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 845

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            Y  LI G C   +L +A +  + M+ +G+ P   T  +L +  C
Sbjct: 846 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 238/495 (48%), Gaps = 42/495 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ +  R  +G  +V  M + G+     TL+ V+     +     A  +FDE+ + G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  +V + C +                                  K F     
Sbjct: 211 LRPDVYVYTAVVRSLCEL----------------------------------KDF----I 232

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E++  M   G   +V T+ V I GLCK     +A  +   L+     + +V TY  +
Sbjct: 233 RAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTL 291

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK E+    E ++  M E G +P+    ++L+ G  K GN   A+DL++ + K G 
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ YNA+I+ +CK G++ EA  L      + L  + +TY+IL+    K+ +   AL 
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              +M + G+   ++ Y++LI+  C+  K++ ++  F E I  GL P    YTS+I GY 
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G + +A + +  M   G +P+  T+ ALISGLC  +++ EA + +  M+   + P EV
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L   +CK+G++  A  +L+ + +K  +    T   LI  LCS  RV  A  F + L
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 636 LGKDQNVDRVSLAAL 650
            G+ Q ++ +  +AL
Sbjct: 592 QGEQQKLNEMCFSAL 606



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 207/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++    I + +    +  E+ ++GL         VV   CEL     A EV   M + G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                ++Y + +   C+  RV EA    + +  +G   D  T   L+   C        +
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE---EFE 302

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              E++ EM+  G+ P+    + L+DGL KKG    AF L  K V+     P++  Y A+
Sbjct: 303 AGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK-VKKFGVAPSLFVYNAL 361

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  CK+ K++ AE L   M  +GL PN  TY+ LI   CK G  + A   +  M + G 
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              +Y Y+++I G CK G+++ A  L  +     L+ + + YT L+S + K+ E   A  
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M   G++P+ + +T LI+  C   +M E+ K F E +   + P + TY  +I G+ 
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++GN   A +    M + G  PD  TY  LISGLC   ++ EA +F   + G+     E+
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEM 601

Query: 579 TRVTLAYEYCKQG 591
               L + YCK+G
Sbjct: 602 CFSALLHGYCKEG 614



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 10/364 (2%)

Query: 167 GRLKEG-----FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           G  KEG     F ++ EM   GL   T T   ++   C  G V  A E  +++       
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +   +  ++  YC+ GR+ +A      ML RG  +D    ++LI     +  R SI    
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI---I 655

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +LL++M  +G +P+   +T +ID   K G  + AF L+  +V S+   PNV TYTA+I+G
Sbjct: 656 DLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV-SEGCLPNVVTYTALING 714

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK   M++AE+L   M     LPN NTY   +      GN E+A  L D++  EG   N
Sbjct: 715 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLAN 773

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YN +I G CK GR+QEA E+L       +  D I+Y+ ++ E+ ++ + K+A+ L+ 
Sbjct: 774 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 833

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+  G+NPD  AY  LI   C   ++ ++ +   + +  G+ P + TY S+I G     
Sbjct: 834 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMS 893

Query: 522 NISS 525
           ++SS
Sbjct: 894 SVSS 897



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P + T + +++G  +  +   A  L + +   GL P+   YT+++   C++ +F RA ++
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M   GC  ++  YN  I GLCK  RV EA E+           + ++Y         
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI----------KNLLSY--------- 278

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                            GL  D+  Y TL+   C+ ++ +  E+   E I  G  P++  
Sbjct: 279 ----------------KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            ++++ G  + GNI SA     ++ + G AP    Y ALI+ +CK  KLDEA   + +M 
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVG 626
            KG+ P +VT   L   +CK+G    A+  L  + +   K  +   ++LI   C   ++ 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            A   F +++      + V   +L +  C E   +  F    +   +GI
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%), Gaps = 7/231 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           M+ + A+ G LK  F +   M + G LP + +    + G+ C++GL++ AE +  EM A 
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL-CKIGLMDKAELLCREMLAS 734

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               + ++Y   +      G + +A +    +L+ G + +  T  +LI  FC     G I
Sbjct: 735 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCK---LGRI 790

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A E+L  M+  G  P+  +++ +I   C++G  ++A +L+  ++ +    P+   Y  
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML-NRGVNPDTVAYNF 849

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +I G C   ++ +A  L + M  +G+ PN  TY SLI+G C + +     D
Sbjct: 850 LIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 214/407 (52%), Gaps = 4/407 (0%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G +E A ++  EM  +G      +Y +++ A C +G   +A + L  M  +  + + 
Sbjct: 210 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 269

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI   C +G    I++A  +  +M++ G  P + T   LI+G CK+GW   AF+L
Sbjct: 270 HTYTILIDRLCREG---KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++   N KPN+ TY  ++ G C+  K  +A +LL R+ + GLLP+  TY  L+ G C
Sbjct: 327 -LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 385

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A+++ + M   G  P+ + + A+IDGLCK GR+++A  +L    ++ +  D++
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+T L+  H K  + K    LF  MV+       H +   + A  +  K+ E+     + 
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  GL P+  T+T +I G+ R G  + ++K  +RM Q GC+P+  TY  +I+GLC   ++
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           +EA     SM   G+SP   T   L   + K G    A  I+ ++ K
Sbjct: 566 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 612



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 4/417 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E GRL+E F +  EM   G    T T   ++   C++G+ + A ++ DEM  + 
Sbjct: 205 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G++ EA+     ML  G      T   LI  +C +G+   + 
Sbjct: 265 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW---VV 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+LL  M +   KPN+ T+  L++GLC+   + KAF L L+ V  +   P+  TY  +
Sbjct: 322 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF-LLLRRVVDNGLLPDRVTYNIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CKE ++N A  +   M   GL P+  T+T+LI G CK+G  E+A  ++  M K+G 
Sbjct: 381 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +   + A+IDG CK G+ ++   L +   +        T+   L    K  +  +A  
Sbjct: 441 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M+K GL P +  +T LI   CR  +   S K  +    AG  P   TYT +I G  
Sbjct: 501 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +G +  A      M+  G +P++ TY  L+    K  +LD A Q   +M+  G  P
Sbjct: 561 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 617



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           LM +A   MG V  A      M++ G +L       ++ A C  GF   ++ A     ++
Sbjct: 100 LMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF---VQAAEMFCCKV 154

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +R G+  + +  T L+   C++    +AFR+F K+ + ++ +PN  TY+ +I G C+  +
Sbjct: 155 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGR 214

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  L + M E+G  P+T TYT LI   C +G  ++A  ++D M  + C PN++ Y  
Sbjct: 215 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 274

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +ID LC++G+++EA  + +K  +  L    IT+  L++ + K+     A  L   M K  
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  Y  L+   CR  K  ++    +  +  GL P + TY  ++ G+ ++G ++ A 
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  MN  G  PD  T+ ALI GLCK  +L++A     SM+ KGIS  EVT   L   +
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTL 615
           CK G +     + E++ +   + T +T 
Sbjct: 455 CKIGKAKDVCFLFENMVENRCLTTAHTF 482



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 215/503 (42%), Gaps = 78/503 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +IG   +   M+ EM          T   ++   C  G +E A  VF +M   G
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM----------------------------- 249
           +C    ++  ++  YC+ G V  A + LS M                             
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 359

Query: 250 ------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                 +D G + D  T  +L+  FC +G    +  AF +   M   G +P+ +T T LI
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEG---QLNMAFNIFNSMNSAGLEPDGFTFTALI 416

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK------------------- 344
           DGLCK G  E+A  +   +V+       V T+TA+I G+CK                   
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDEV-TFTALIDGHCKIGKAKDVCFLFENMVENRC 475

Query: 345 ----------------EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
                           + K+N A  +L +M + GL+P+  T+T LI GHC+ G    +  
Sbjct: 476 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 535

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +++ M + GC+PN+Y Y  II+GLC  GRV+EA  +L       +  +  TY +L+  H+
Sbjct: 536 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 595

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLFPTK 507
           K     +A  +   MVK G  P+ H Y+ L++ F        +        + A    ++
Sbjct: 596 KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 655

Query: 508 ETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           E   + +  ++ R  ++  A+K    + + G  P    Y  L+ GLCK+ ++ EA Q  +
Sbjct: 656 ENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQ 714

Query: 567 SMIGKGISPCEVTRVTLAYEYCK 589
            M+  G+ P +     + + YCK
Sbjct: 715 DMVKHGLFPDKAISSIIEH-YCK 736



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 210/462 (45%), Gaps = 37/462 (8%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           S++  GN +        ++     + +  + F ++  + +NGL     T N +V   C+ 
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +  A  +F+ M + G+  D  ++  ++   C++GR+ +A+  L +M+ +G  LD  T 
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447

Query: 262 TLLITAFCDKGFRGSIKQAFE--------------------------------LLEEMVR 289
           T LI   C  G    +   FE                                +L +M++
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  P+V THT+LI+G C+ G T  + ++ L+ ++     PNV+TYT +I+G C   ++ 
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKM-LERMKQAGCSPNVYTYTIIINGLCNNGRVE 566

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE +L  M   G+ PN  TY  L+  H K G  +RA+ ++  M K GC PN + Y+A++
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626

Query: 410 DGLCKKGRVQEAYELLKKA--FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
            G         A  L        R L +++     L S   +  +   AL +   + K G
Sbjct: 627 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 686

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P    Y  L+   C++ ++ E+++  Q+ +  GLFP K   +S+I  Y +     + +
Sbjct: 687 V-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCL 744

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           ++ + +      P   +Y  +I GL  + ++ EA +    ++
Sbjct: 745 EFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 5/325 (1%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ M E G   +   Y++L+    K+     A+ +   M  EG       Y  +++ LCK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIH 473
            G VQ A     K  +     D    T L+  + ++ +  +A  +F +M K     P+  
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+ LI   C   +++E+ +  QE +  G  P+  TYT +I      G    A+K    M
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
               C P+  TY  LI  LC++ K++EA   +  M+  G+ P  +T   L   YCK+G  
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +A  +L  ++K   K  IRT N L+  LC   +   A L   +++      DRV+   L
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380

Query: 651 KNA-CYESNKYALFSDLSQRIAEGI 674
            +  C E      F+  +   + G+
Sbjct: 381 VDGFCKEGQLNMAFNIFNSMNSAGL 405



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 53/396 (13%)

Query: 98  EQAITVVASLANEAGSMVALSFF-----YWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
           EQA  ++ S+  +  S+  ++F      +  IG AK   F+        +++ N     A
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL------FENMVENRCLTTA 479

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H    C + +  +  +L E  +M+ +M   GL     T   ++   C  G    + ++ +
Sbjct: 480 H-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G   +  +Y +++   C  GRV EA+  L +M   G   ++ T  +L+ A    G
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 598

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG------------LCKKG---------- 310
               + +AF+++  MV+ G +PN + ++ L+ G            L   G          
Sbjct: 599 ---RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSE 655

Query: 311 ------WTEKAFRLF-----LKLVRSDNYKPNVHT---YTAMISGYCKEEKMNRAEMLLE 356
                  +   FRL      LK +R +  K  V T   Y  ++ G CKE ++  A+ L +
Sbjct: 656 ENDNNCLSSHVFRLMDVDHALK-IRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQ 714

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M + GL P+    +S+I  +CK   ++   + M L+      P+  +Y  +I GL  +G
Sbjct: 715 DMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 773

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           RVQEA +L+    +     +++  T  +   +K+ E
Sbjct: 774 RVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEE 809


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 237/459 (51%), Gaps = 7/459 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +  A ++  +M +RG+  + ++Y ++V  YC+MG + EA   +  M
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                + D  T  +LI   C++G    I++AF+L +EM      P+V ++  LI+G  + 
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEG---RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +AF+L L+ +     KPN  T+  M+  YCKE KM+ A   + +M+E G  P+  T
Sbjct: 362 SKISEAFKL-LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +LI G+CK GN   A+  MD MG++    +    N I+  LC++ +++EAY+LL  A 
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +R    D+++Y  L+  + K     +AL L+  M +  + P    Y  +I   C+  K +
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++     E + +GL P + TY +++ GY R+G++  A ++  +M +    PD  T   L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW- 608
            GLC +  L++A + + + + KG +   VT  TL    CK+G    A  +L  +++K   
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 609 --IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
               T N +I  L    R+  A  F  K+L K    D+V
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 235/476 (49%), Gaps = 8/476 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V ++ E F++    G+  + +++ +++  YC   +  +A  +L+ M       DN T   
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++   C KG  G    A +LL +M  +G  PN  T+ +L+ G CK GW ++A  + ++L+
Sbjct: 249 ILDTLCKKGRLG---DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV-IELM 304

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +N  P+V TY  +I+G C E ++  A  L + M+   LLP+  +Y +LI G  +    
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A+ L++ M ++G  PN   +N ++   CK+G++ +A   + K  +     D +TY  L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++ + K     +A      M +  +  D     T++   CR+KK++E+ K    A   G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F  + +Y ++I GY +DGN+  A+K +  M +    P  +TY  +I GLC+  K ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC 620
               ++  G+ P E T  T+ + YC++GD   A      + +   K  + T N L+R LC
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGIG 675
            E  +  A   F+  + K + +D V+   L  + C E      F+ LS+   + +G
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 236/525 (44%), Gaps = 69/525 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + GRL +   ++++M + GL    +T N +V   C++G ++ A  V + M    
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++   C  GR+ EA +    M +   + D  +   LI    +      I 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE---WSKIS 365

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+LLEEM  KG KPN  TH +++   CK+G  + A     K+  S  + P+  TY  +
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES-GFSPDCVTYNTL 424

Query: 339 ISGYCK-----------------------------------EEKMNRAEMLLERMKEQGL 363
           I+GYCK                                   E+K+  A  LL   +++G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             +  +Y +LI G+ K GN +RA  L D M ++   P+   YN II GLC+ G+ ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            L +  +  L  D+ TY  +L  + ++ + ++A     +MV+    PD+     L+   C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
            +  ++++ K F   ++ G      TY ++I    ++G +  A      M +    PD+ 
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV------------------TLAY 585
           TY A+I+ L    ++ EA +F   M+ KG  P +V ++                  ++AY
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAY 724

Query: 586 -----EYCKQGDSATAMIILE-------SLDKKLWIRTVNTLIRK 618
                E C +G    AM I         ++DK  +I  ++ LI++
Sbjct: 725 SEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 62/353 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G + E F  + EM    + + + TLN ++   C    +E A ++      RG
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 219 VCADASSYKLMVVAY-----------------------------------CRMGRVTEAD 243
              D  SY  ++V Y                                   C+ G+  +A 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ +L+ G + D  T   ++  +C +G    +++AF+   +MV   +KP+V+T  +L+
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREG---DVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC +G  EKA +LF   V S     +  TY  +I+  CKE +++ A  LL  M+E+ L
Sbjct: 601 RGLCMEGVLEKALKLFNTWV-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN---------------------- 401
            P+  TY ++I      G    A + M  M ++G  P+                      
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDS 719

Query: 402 -IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              AY+  I  LC +G+ ++A  +  ++ Q+ +  DK TY  L+   +K+ ++
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 25/245 (10%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++    + G+ ++  S + E+  +GL    +T N ++   C  G VE A +  ++M  
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                D  +  +++   C  G + +A +  +  + +G  +D  T   LIT+ C +   G 
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE---GR 643

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH--- 333
           +  AF LL EM  K   P+ YT+  +I  L   G   +A     K++   N    V    
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLD 703

Query: 334 -------------------TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
                               Y+  I   C E K   A  +    K++G+  + +TY +L+
Sbjct: 704 KNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763

Query: 375 YGHCK 379
            G  K
Sbjct: 764 DGLIK 768



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 57/251 (22%)

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP---TKETYTSMICGYLRDGNISSA 526
           P      T I A+ +  +   + + F++     L P   T  T  + +  Y    ++S +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT---- 582
            + F    ++G  P+  T+  +I G C ++K  +A +F   M     SP  VT  T    
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 583 -------------------------------LAYEYCKQGDSATAMIILE-----SLDKK 606
                                          L Y YCK G    A  ++E     +L   
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV----DRVSLAALKNACYESNK--- 659
           +W  T N LI  LC+E R+  A     KL  + +N+    D VS   L N C E +K   
Sbjct: 313 VW--TYNMLINGLCNEGRIEEA----FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 660 -YALFSDLSQR 669
            + L  ++S++
Sbjct: 367 AFKLLEEMSEK 377


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 236/469 (50%), Gaps = 45/469 (9%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL-----VEYAEEVFDEMCARGVCADAS 224
           K G++   EM  + +  I   L+  +G +  LG      +  A +VFD M     CA  S
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266

Query: 225 -SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            SY +++   C +GR+ EA      M ++G      T T+LI A CD   RG I +AF L
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD---RGLIDKAFNL 323

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            +EM+ +G KPNV+T+TVLIDGLC+ G  E+A  +  K+V+ D   P+V TY A+I+GYC
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK-DRIFPSVITYNALINGYC 382

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K+ ++  A  LL  M+++   PN  T+  L+ G C+VG   +A  L+  M   G +P+I 
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           +YN +IDGLC++G +  AY+LL      +++ D +T+T +++   KQ +   A      M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 464 VKAGLNPDIHAYTTLIAAFCRQK-----------------------------------KM 488
           ++ G++ D    TTLI   C+                                     K+
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           KE      +    GL P+  TYT+++ G +R G+I+ + +  + M   GC P+   Y  +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           I+GLC+  +++EA +   +M   G+SP  VT   +   Y   G    A+
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E+GRL+E F +  +M   G    T T   ++   C+ GL++ A  +FDEM  RG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G++ EA+     M+         T   LI  +C  G    + 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG---RVV 388

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AFELL  M ++  KPNV T   L++GLC+ G   KA  L LK +  +   P++ +Y  +
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL-LKRMLDNGLSPDIVSYNVL 447

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+E  MN A  LL  M    + P+  T+T++I   CK G  + A   + LM ++G 
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +      +IDG+CK G+ ++A  +L+   +  +     +  ++L    K  + K+ L 
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  ++ K GL P +  YTTL+    R   +  S +  +    +G  P    YT +I G  
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           + G +  A K    M   G +P+++TY  ++ G     KLD A +   +M+ +G
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 16/388 (4%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           L  V Y RM    EAD ++  M+D   I         + A C  G+    + A   + ++
Sbjct: 178 LAYVTYRRM----EADGFVVGMIDYRTI---------VNALCKNGY---TEAAEMFMSKI 221

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           ++ G+  + +  T L+ G C+      A ++F  + +     PN  +Y+ +I G C+  +
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  L ++M E+G  P+T TYT LI   C  G  ++A++L D M   GC PN++ Y  
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDGLC+ G+++EA  + +K  +  +    ITY  L++ + K      A  L   M K  
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P++  +  L+   CR  K  ++    +  +  GL P   +Y  +I G  R+G++++A 
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           K    MN     PD +T+ A+I+  CKQ K D A  F   M+ KGIS  EVT  TL    
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTL 615
           CK G +  A+ ILE+L K   + T ++L
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSL 549



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 249/561 (44%), Gaps = 63/561 (11%)

Query: 115 VALSFFYWAIGFAKF-------RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA--- 164
           + + FF W    + +          ++L       ++S+G +  AH V+  ++   +   
Sbjct: 85  ICVRFFMWVCKHSSYCFDPTQKNQLLKL-------IVSSGLYRVAHAVIVALIKECSRCE 137

Query: 165 -EIGRLKEGFSMVIEMTNNGL--PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            E+ +L   F  + E+    L  P  +S L  +  +  +LG + Y    +  M A G   
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKL--DLGFLAYV--TYRRMEADGFVV 193

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR------- 274
               Y+ +V A C+ G    A+ ++S +L  G +LD+   T L+  FC +G         
Sbjct: 194 GMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC-RGLNLRDALKV 252

Query: 275 ---------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
                                      G +++AF L ++M  KG +P+  T+TVLI  LC
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            +G  +KAF LF +++     KPNVHTYT +I G C++ K+  A  +  +M +  + P+ 
Sbjct: 313 DRGLIDKAFNLFDEMI-PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY +LI G+CK G    A++L+ +M K  C PN+  +N +++GLC+ G+  +A  LLK+
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                L  D ++Y +L+    ++     A  L   M    + PD   +T +I AFC+Q K
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
              +  F    +  G+   + T T++I G  + G    A+   + + ++       +   
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           ++  L K  K+ E       +   G+ P  VT  TL     + GD   +  ILE +    
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611

Query: 608 WIRTV---NTLIRKLCSEKRV 625
            +  V     +I  LC   RV
Sbjct: 612 CLPNVYPYTIIINGLCQFGRV 632



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 50/417 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G+  +   ++  M +NGL     + N ++   C  G +  A ++   M    
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  D  ++  ++ A+C+ G+   A  +L  ML +G  LD  T T LI   C  G      
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531

Query: 273 -------------------------FRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                     +G  +K+   +L ++ + G  P+V T+T L+DGL
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            + G    +FR+ L+L++     PNV+ YT +I+G C+  ++  AE LL  M++ G+ PN
Sbjct: 592 IRSGDITGSFRI-LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG--LCKKGRVQEAYEL 424
             TYT ++ G+   G  +RA + +  M + G   N   Y++++ G  L +KG        
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH----------- 473
           +     RE   + I   I + E L    +   + L  R+ K G   + +           
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770

Query: 474 ----AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
               A   ++ ++C +KK  +  +     + +G  P+ +++  +I G  ++G+   A
Sbjct: 771 FLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 146/360 (40%), Gaps = 11/360 (3%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCK--EEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIY 375
            LKL+ S       H     +   C   E++M +     + ++E  G   N   Y+SL+ 
Sbjct: 109 LLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLM 168

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
              K+     AY     M  +G    +  Y  I++ LCK G  + A   + K  +     
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL 228

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           D    T LL    +    + AL +F  M K     P+  +Y+ LI   C   +++E+   
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             +    G  P+  TYT +I      G I  A   F  M   GC P+  TY  LI GLC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRT 611
             K++EA      M+   I P  +T   L   YCK G    A  +L  ++K   K  +RT
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---SNKYALFSDLS 667
            N L+  LC   +   A     ++L    + D VS   L +  C E   +  Y L S ++
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 140/312 (44%), Gaps = 24/312 (7%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++KE  +M+ ++   GL     T   +V      G +  +  + + M   G   +   Y 
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++   C+ GRV EA++ LSAM D G   ++ T T+++  + + G    + +A E +  M
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG---KLDRALETVRAM 677

Query: 288 VRKGWKPNVYTHTVLIDG--LCKKGW--TEKAFRLFLKLVRSDNYKPN-----VHTYTAM 338
           V +G++ N   ++ L+ G  L +KG   +E++    + L  +D    N     V      
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGC 737

Query: 339 ISGYC--------KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           ISG C        KE + + +  L++ + E+G+         ++  +C      +  +L+
Sbjct: 738 ISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELI 796

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK---ITYTILLSEH 447
            L+ K G  P+  ++  +I GL K+G  + A EL+ +        +K   +TY   L E 
Sbjct: 797 TLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856

Query: 448 LKQAETKQALGL 459
            +  +  + + L
Sbjct: 857 DETGDCSEVIDL 868



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 25/223 (11%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIG-----RLKEGFSMVIEMTNNGLPLITST 190
           Y V     ++NG  +RA E ++ MV    E+       L +GF +  +  +N      S 
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713

Query: 191 LN-RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           +  R     C   L+   E++    C  G+C        +V   C+ GR  E++  +  +
Sbjct: 714 IALRETDPECINELISVVEQLGG--CISGLCI------FLVTRLCKEGRTDESNDLVQNV 765

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L+RG  L+ A + +++ ++C K       +  EL+  +++ G+ P+  +  ++I GL K+
Sbjct: 766 LERGVFLEKA-MDIIMESYCSKKKH---TKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821

Query: 310 GWTEKAFRLFLKLVRSDNY--KPNVHTYTAMI-----SGYCKE 345
           G  E+A  L ++L+ S+    K  V TY   +     +G C E
Sbjct: 822 GDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSE 864


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 232/451 (51%), Gaps = 24/451 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT---NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +V++F   G L +G   V+ +     N  P +  T N +V   C+ G +E A +VFDEM 
Sbjct: 51  LVAAFCRAGEL-DGAERVVSLMREEGNAKPNLV-TFNSMVNGLCKAGRMEGARKVFDEMV 108

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+  D  SY  ++  YC++G + E+    S M  RG + D  T T LI A C  G   
Sbjct: 109 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG--- 165

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +++QA  L+ +M  +G + N  T T LIDG CKKG+ + A  L ++ +R    +P+V  Y
Sbjct: 166 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL-LAVEEMRKCGIQPSVVCY 224

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+I+GYCK  +M+ A  L+  M+ + + P+  TY+++I G+CKVGN + A+ L   M K
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+++I GLC++ R+ +A EL +   Q  +Q D+ TYT L+  H K+   ++
Sbjct: 285 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS-MI 514
           AL L   M++ G+ PD+  Y+ LI    +  + KE+ +   +       P    Y + M+
Sbjct: 345 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 404

Query: 515 C--------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           C              G+   G +  A K +Q M       D   Y  LI G C+   + +
Sbjct: 405 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 464

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           A  F++ M+  G SP   + ++L     ++G
Sbjct: 465 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 211/384 (54%), Gaps = 5/384 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G+     T N +V   C  G +E A  V  +M   G   +A +Y  +V A+CR G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 239 VTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +  A+R +S M + G    N  T   ++   C     G ++ A ++ +EMVR+G  P+V 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA---GRMEGARKVFDEMVREGLAPDVV 117

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           ++  L+ G CK G   ++  +F ++ +     P+V T+T++I   CK   + +A  L+ +
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+E+GL  N  T+T+LI G CK G  + A   ++ M K G  P++  YNA+I+G CK GR
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A EL+++   + ++ D +TY+ ++S + K      A  L  +M+K G+ PD   Y++
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C +K++ ++ + F+  +  G+ P + TYT++I G+ ++GN+  A+     M + G
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356

Query: 538 CAPDNITYGALISGLCKQSKLDEA 561
             PD +TY  LI+GL K ++  EA
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEA 380



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 213/412 (51%), Gaps = 6/412 (1%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M+  G   +  T  +L+ A C    RG +++A  ++ +M   G  PN  T+  L+   C+
Sbjct: 1   MVRHGVAPNVYTYNILVRALC---ARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 57

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  + A R+   +    N KPN+ T+ +M++G CK  +M  A  + + M  +GL P+  
Sbjct: 58  AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 117

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +Y +L+ G+CKVG    +  +   M + G  P++  + ++I   CK G +++A  L+ + 
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +R L+ +++T+T L+    K+     AL     M K G+ P +  Y  LI  +C+  +M
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
             + +  +E     + P   TY+++I GY + GN+ SA +  Q+M + G  PD ITY +L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           I GLC++ +L++AC+ +E+M+  G+ P E T  TL   +CK+G+   A+ + + + +K  
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 609 IRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           +  V T   LI  L    R   A     KL  +D   D +   AL   C ++
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 20/479 (4%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E+A+ VV  +     +  A+++      F +         V  + +   GN +       
Sbjct: 27  EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFN 85

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            MV+   + GR++    +  EM   GL     + N ++   C++G +  +  VF EM  R
Sbjct: 86  SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  ++  ++ A C+ G + +A   ++ M +RG  ++  T T LI  FC KGF   +
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF---L 202

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A   +EEM + G +P+V  +  LI+G CK G  + A R  ++ + +   KP+V TY+ 
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA-RELIREMEAKRVKPDVVTYST 261

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +ISGYCK   ++ A  L ++M ++G+LP+  TY+SLI G C+      A +L + M + G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + Y  +IDG CK+G V++A  L  +  ++ +  D +TY++L++   K A TK+A 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 458 GLFCRMVKAGLNPDIHAY---------------TTLIAAFCRQKKMKESEKFFQEAITAG 502
            L  ++      PD   Y                 L+  FC +  MKE++K +Q  +   
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
                  Y+ +I G+ R GN+  A+ + ++M + G +P++ +  +L+ GL ++  + EA
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 160/522 (30%), Positives = 249/522 (47%), Gaps = 37/522 (7%)

Query: 151 RAHEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           +A  V  C +V     I   + G  M+ EM   G     + ++ ++    ++G +E A E
Sbjct: 292 KADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFE 351

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF- 268
           + +++   GV  +   Y  M+ + C+ G++ EA+   S M +RG   ++ T T+LI  F 
Sbjct: 352 LLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFG 411

Query: 269 ----CDKGFR---------------------------GSIKQAFELLEEMVRKGWKPNVY 297
                D  F                            G +K A  L +EMV KG KP V 
Sbjct: 412 RRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVA 471

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T LI G CK G   KAF+L+ ++       PN  T+TA+I G C+  KM  A  L + 
Sbjct: 472 TYTSLISGYCKDGLVPKAFKLYHEMT-GKGIAPNTVTFTALICGLCQINKMAEASKLFDE 530

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E  +LPN  TY  LI GHC+ GN  RA++L+D M K+G +P+ Y Y  +I GLC  GR
Sbjct: 531 MVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V EA E +     +  + D++ YT LL    K+   K+AL     MV  GL  D+ +Y  
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI+    Q      E   +E    G+ P    YT +I G+++ GN+  A +++  M   G
Sbjct: 651 LISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEG 709

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+++TY AL++GL K   ++EA   ++ M+     P  +T         K+G+   A+
Sbjct: 710 YVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENAL 769

Query: 598 IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLG 637
            +  ++ +  +  TV  N LIR  C   +   AA     ++G
Sbjct: 770 QLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 237/469 (50%), Gaps = 44/469 (9%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-KGFRGSIKQ 279
           + +S + +++  Y +  RV +    ++ M D G + +  TL+ L+ A    + FR    Q
Sbjct: 153 SSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFR----Q 208

Query: 280 AFELLEEMVRKGWKPNVY-----------------------------------THTVLID 304
             EL + +V  G KP+ Y                                   T+ V I+
Sbjct: 209 VLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFIN 268

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK     +A  +   L      K ++ TY  ++ G C+ ++      +++ M E G +
Sbjct: 269 GLCKSKRVWEAVEVKRSL-GEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+    + LI G  K+G+ E A++L++ +GK G  PN++ YN++I+ LCK G+++EA  L
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELL 387

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                +R L  + +TYTIL+    ++A+   A   F +M++ G++  +++Y ++I   C+
Sbjct: 388 FSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCK 447

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             KMK +E  F+E +  GL PT  TYTS+I GY +DG +  A K +  M   G AP+ +T
Sbjct: 448 FGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVT 507

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           + ALI GLC+ +K+ EA + ++ M+   I P EVT   L   +C++G++  A  +L+ + 
Sbjct: 508 FTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMI 567

Query: 605 KKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           KK       T   LI  LCS  RV  A  F + L  K Q +D +   AL
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 222/467 (47%), Gaps = 39/467 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G++K    +  EM + GL    +T   ++   C+ GLV  A +++ EM  +G
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C++ ++ EA +    M++   + +  T  +LI   C +G   +  
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREG---NTT 557

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFELL+EM++KG  P+ YT+  LI GLC  G   +A + F+  +   + + +   YTA+
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA-KEFINDLHHKHQRLDELCYTAL 616

Query: 339 ISGYCKEEKMN-----RAEM-----------------------------LLERMKEQGLL 364
           + G+CKE ++      R EM                             LL  M  +G+ 
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQ 676

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   YT LI G  K GN ++A++   +M  EG  PN   Y A+++GL K G V EA  L
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K+    E   + ITY   L    K+   + AL L   M++      +  Y  LI  +C+
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTV-TYNILIRGYCQ 795

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             K +E+ K     I  G+ P   TY++ I  Y + GN+ +A+  ++ M Q G  PD + 
Sbjct: 796 IGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVV 855

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +  LI   C   +LD A Q    M+ +G+ P + T  +L  +  ++ 
Sbjct: 856 FNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 213/443 (48%), Gaps = 4/443 (0%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++++ A I + ++   +   + N G+         VV   CEL     A+E+ ++  
Sbjct: 193 LSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE 252

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G      +Y + +   C+  RV EA     ++ ++G   D  T   L+   C      
Sbjct: 253 GNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQ--- 309

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             +   E+++EM+  G+ P+    + LI+GL K G  E AF L  K V      PN+  Y
Sbjct: 310 EFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNK-VGKLGVVPNLFVY 368

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            +MI+  CK  K+  AE+L   M E+GL PN  TYT LI G  +    + A+   + M +
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G +  +Y+YN++I+  CK G+++ A  L K+   + L+    TYT L+S + K     +
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L+  M   G+ P+   +T LI   C+  KM E+ K F E +   + P + TY  +I 
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+ R+GN + A +    M + G +PD  TY  LI+GLC   ++ EA +F   +  K    
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608

Query: 576 CEVTRVTLAYEYCKQGDSATAMI 598
            E+    L   +CK+G    A++
Sbjct: 609 DELCYTALLQGFCKEGRIKEALV 631



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 175/399 (43%), Gaps = 66/399 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +I ++ E   +  EM    +     T N ++   C  G    A E+ DEM  +G
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  D  +Y+ ++   C  GRV+EA  +++ +  +   LD    T L+  FC +G      
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 273 ---------------------FRGSIKQA----FELLEEMVRKGWKPNVYTHTVLIDGLC 307
                                  G++ Q     FELL EM  KG +P+   +T+LIDG  
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM--------- 358
           K G  +KAF  +  ++  + Y PN  TYTA+++G  K   +N A++L +RM         
Sbjct: 691 KSGNLKKAFEFWYIMI-GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNH 749

Query: 359 -----------KE--------------QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
                      KE              QG   NT TY  LI G+C++G F+ A  L+D+M
Sbjct: 750 ITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  P+   Y+  I   CK+G V  A ++ +   QR L+ D++ +  L+       E 
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            +AL L   M+  GL P    Y +L+    ++ ++ + +
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 3/358 (0%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L + L+R     P V T +A+++   +  K  +   L + +   G+ P+   YT ++   
Sbjct: 176 LVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCL 235

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C++ +F +A ++++     GC+ +I  YN  I+GLCK  RV EA E+ +   ++ L+AD 
Sbjct: 236 CELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADL 295

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY  L+    +  E +  + +   M++ G  P   A + LI    +   ++ + +   +
Sbjct: 296 VTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNK 355

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G+ P    Y SMI    + G +  A   F  M + G  P+++TY  LI G  +++K
Sbjct: 356 VGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK 415

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL--WIRTVNT 614
           LD A  ++  MI  GIS    +  ++    CK G    A ++  E +DK L   + T  +
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           LI   C +  V  A   +H++ GK    + V+  AL     + NK A  S L   + E
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE 533


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 248/507 (48%), Gaps = 25/507 (4%)

Query: 80  RSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVC 139
           RS P R  L+        +  I V+ ++ N+    + LSFF WA      R    L   C
Sbjct: 77  RSEPLRRVLKPYESKFRADHLIWVLMNIKNDY--RLVLSFFEWAC----LRRDPSLEARC 130

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS----MVIEMTNNGLPLITSTLNRVV 195
             + I+  +  +  ++ + ++  F     L  G S    +  +M N GL +   + N  +
Sbjct: 131 IVAQIATAS--KDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFI 188

Query: 196 --------GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
                   GI   L   E+  ++ +EM  +G+  +  +Y  +++  C+ G+V EA+R L 
Sbjct: 189 SHLSEDLDGIKIALK-GEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLR 247

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+  G   D    T LI  FC     G++  A+ L +EM ++   P+  T+T +I GLC
Sbjct: 248 EMISEGIAPDGVIYTTLIDGFCK---LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 304

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G   +A +LF ++V     +P+  TYTA+I GYCKE KM  A  L  +M + GL PN 
Sbjct: 305 QTGRVMEADKLFHEMV-CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 363

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYT+L  G CK G  + A +L+  M ++G   NIY YN++++GLCK G + +A +L+K 
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D +TYT L+  + K  E  +A  L  +M+   L P +  +  L+  FC    
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 483

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           +++ EK  +  +  G+ P   TY S+I  Y    N+ +  + ++ M   G  PD  TY  
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543

Query: 548 LISGLCKQSKLDEACQFYESMIGKGIS 574
           LI G CK   + EA   +  M+GKG +
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFN 570



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 193/380 (50%), Gaps = 4/380 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   ++ EM + G+         ++   C+LG V  A  +FDEM  R +  D  +Y
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ GRV EAD+    M+ +    D  T T LI  +C +G    +K+AF L  +
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG---KMKEAFSLHNQ 353

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M++ G  PN+ T+T L DGLCK G  + A  L  ++ R    + N++TY ++++G CK  
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLELNIYTYNSLVNGLCKAG 412

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +++A  L++ M+  G  P+  TYT+L+  +CK     RA++L+  M      P +  +N
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++G C  G +++  +LLK   ++ +  +  TY  L+ ++  +   +    ++  M   
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD + Y  LI   C+ + MKE+    ++ +  G   T  +Y ++I G+ +      A
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 592

Query: 527 VKYFQRMNQIGCAPDNITYG 546
            + F++M + G   D   Y 
Sbjct: 593 RELFEQMRREGLVADREIYN 612



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 17/302 (5%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPN +TY  +I   CK  K+  AE +L  M  +G+ P+   YT+LI G CK+GN   AY 
Sbjct: 220 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L D M K   +P+   Y A+I GLC+ GRV EA +L  +   + L+ D++TYT L+  + 
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+ + K+A  L  +M++ GL P+I  YT L    C+  ++  + +   E    GL     
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY S++ G  + GNI  AVK  + M   G  PD +TY  L+   CK  ++  A +    M
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL-WI---------RTVNTLIRK 618
           + + + P  VT   L   +C  G       +LE  +K L W+          T N+LI++
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSG-------MLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512

Query: 619 LC 620
            C
Sbjct: 513 YC 514



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 6/320 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G++KE FS+  +M   GL     T   +    C+ G V+ A E+  EMC +G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +V   C+ G + +A + +  M   G   D  T T L+ A+C       + 
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR---EMV 450

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL +M+ +  +P V T  VL++G C  G  E   +L LK +      PN  TY ++
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL-LKWMLEKGIMPNATTYNSL 509

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MDLMGKEG 397
           I  YC    M     +   M  +G++P+ NTY  LI GHCK  N + A+ L  D++GK G
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK-G 568

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
               + +YNA+I G  K+ +  EA EL ++  +  L AD+  Y I    +  + + +  L
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628

Query: 458 GLFCRMVKAGLNPDIHAYTT 477
            L    ++  L  DI    T
Sbjct: 629 ELCDEAIEKCLVGDIQTKNT 648


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 233/467 (49%), Gaps = 9/467 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+ E   ++  M   G          ++   C  G ++  +E+FDEM  +G
Sbjct: 74  LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+  +Y  +V   CR+G+  EA+  L+AM + G   D  T T LI   C  G      
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG---RAT 190

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL  MV KG +P+  T+ VL+ GLCK+G    AF++ L+++     K +V TY  +
Sbjct: 191 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI-LRMMIEKGKKADVVTYNTL 249

Query: 339 ISGYCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           + G C + K++ A  L   M   E  L PN  T+  LI G CK G   +A  +   M K+
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G   N+  YN ++ G  K G+++EA EL K+        +  TY+IL+    K      A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GLFC M   GLNP +  Y TL+A+ C++  +++++  FQE   A   P   ++ +MI G
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            L+ G+     +   +M ++G  PD +T+  LI+ L K  +LDEA    E M+  G +P 
Sbjct: 430 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 489

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLC 620
            +   +L      +GD+   + +L  +  K  +   + V+T++  LC
Sbjct: 490 ALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 31/360 (8%)

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            +++ GLC+ G   +A  L  ++ R  +  P++ +Y  +I+G CK +K+  A  LL  M+
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  PN+ T T+L+ G CK G  + A +L++ M K+G   ++  Y  +I G C  G + 
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
              EL  +   + + A+ +TY+ L+    +  + K+A  +   M + G++PD+  YT LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C+  +   +       +  G  P+  TY  ++ G  ++G +  A K  + M + G  
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D +TY  L+ GLC + K+DEA + + SM                 E C + +       
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN--------------ENCLEPN------- 279

Query: 600 LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
                    + T N LI  LC E R+  A     K++ K    + V+   L   C ++ K
Sbjct: 280 ---------VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 36/336 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++    + G++ E   +   M +N   L     T N ++G  C+ G +  A ++  +M  
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD------ 270
           +G C +  +Y +++    + G++ EA      +LD G + ++ T ++LI  FC       
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368

Query: 271 -KGF-------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            KG                           GS++QA  L +EM     +P++ +   +ID
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G  K G  +    L +K+V     +P+  T++ +I+   K  +++ A+  LERM   G  
Sbjct: 429 GTLKAGDFQFVKELQMKMVEM-GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 487

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y SL+ G    G+     +L+  M  +G   +    + I+  LC   +  +  EL
Sbjct: 488 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 547

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           L   FQ   +   I+   LL + L Q+  K  L  F
Sbjct: 548 LPTFFQGTSEGASISCNELLMQ-LHQSHPKLQLHPF 582


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 236/467 (50%), Gaps = 6/467 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ F ++ R+  GFS++ ++   GL     T   ++   C++G    A E+FD+M A+G 
Sbjct: 135 MNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC 194

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++   C++G    A   L  M + G   +  T + LI + C       + +
Sbjct: 195 QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRL---VNE 251

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           A ++   M  KG  P+++T+T LI GLCK   W E +    L  + S N  P++ T+  +
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS--ALLNEMTSLNIMPDIVTFNVL 309

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +CKE K++ A  +L+ M E G+ PN  TY+SL+YG+    +   A  L  +M  +GC
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI++YN +I+G CK  R+ EA +L  +   + L  + ++Y  L+    +  + ++A  
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M   G  PD+  Y+ L+  FC+Q  + ++ + F+   +  L P    YT ++    
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN   A K F  +   G  P    Y  +I+GLCK+  LDEA + + +M   G  P E+
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEI 549

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           +   +     +  D + A++++  +  + +I  V   + ++C  K+V
Sbjct: 550 SYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSEVCQGKKV 596



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 7/432 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  + +  +C++ RV      L+ ++  G      T T LI   C  G     
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG---EF 179

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA EL ++MV KG +P+VYT+  +I+GLCK G T  A  L LK +     +PN+ TY+ 
Sbjct: 180 AQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL-LKKMEEAGCQPNMVTYST 238

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C++  +N A  +   MK +G+ P+  TYTSLI G CK   ++ A  L++ M    
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  +N ++D  CK+G+V EA  +LK   +  ++ + +TY+ L+  +    +  +A 
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M+  G  P+I +Y  LI  +C+ K++ E+ + F E I  GL P   +Y ++I G+
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A   F+ M   G  PD  TY  L+ G CKQ  L +A + + +M    + P  
Sbjct: 419 CQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 478

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V    L +  CK G+   A  +   L     +  ++   T+I  LC E  +  A   F  
Sbjct: 479 VMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRN 538

Query: 635 LLGKDQNVDRVS 646
           +       D +S
Sbjct: 539 MEADGCPPDEIS 550



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 137/300 (45%), Gaps = 3/300 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L ++M+  GL PN  T +  +   C++   +  + ++  + K G  P I  +  +I+GLC
Sbjct: 115 LSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLC 174

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G   +A EL      +  Q D  TY  +++   K  ET  A GL  +M +AG  P++ 
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMV 234

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+TLI + CR + + E+   F      G+ P   TYTS+I G  +      A      M
Sbjct: 235 TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM 294

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +   PD +T+  L+   CK+ K+ EA    ++M   G+ P  VT  +L Y Y    D 
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDV 354

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A  +   +     K  I + N LI   C  KR+  A   F++++ +    + VS   L
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 4/217 (1%)

Query: 438 ITYTILLSEHLKQAETKQA-LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           I +  LLS  +K  +     + L  +M   GL+P+I+  +  +  FC+ +++        
Sbjct: 93  IQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLA 152

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + I  GL PT  T+T++I G  + G  + AV+ F  M   GC PD  TY  +I+GLCK  
Sbjct: 153 KVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG 212

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           +   A    + M   G  P  VT  TL    C+      A+ I   +  K     I T  
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYT 272

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +LI+ LC   R   A+   +++   +   D V+   L
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVL 309


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 211/416 (50%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S      ++ +   +  EM   G      T + ++   C++G    A ++  +M  +G
Sbjct: 16  LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++ + C+   VTEA  + S M+  G   D  T + ++  FC+    G + 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN---LGRVN 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L ++MV +   PN  T T+LIDGLCKK    +A+ +F + +     +P+V+TY A+
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF-ETMTEKGLEPDVYTYNAL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   +M+ A+ L   M  +G  PN  +Y  LI GHCK G  + A  L+  M  +  
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+I+ Y+ ++ G C+ GR QEA ELLK+     L  + ITY+I+L    K     +A  
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M ++ + P+I  YT LI   C   K++ + + F      G+ PT  TYT MI G L
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           + G  + A + F+ M   GC P++ TY  +I G  +      A +  E M+GKG S
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFS 427



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 192/372 (51%), Gaps = 4/372 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++  ++   C   ++ +A +    M+  G   D  T + +I   C     G+   A +LL
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCK---MGNTTMALQLL 68

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           ++M  KG KPNV  +  +ID LCK     +A   F ++V+ +   P+V TY++++ G+C 
Sbjct: 69  KKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK-EGIPPDVFTYSSILHGFCN 127

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             ++N A  L ++M E+ ++PN  T+T LI G CK      A+ + + M ++G  P++Y 
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YNA++DG C + ++ EA +L     ++    +  +Y IL++ H K     +A GL   M 
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
              L PDI  Y+TL+  FC+  + +E+++  +E  + GL P   TY+ ++ G  + G++ 
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +  + M +    P+   Y  LI G+C   KL+ A + + ++  KGI P  VT   + 
Sbjct: 308 EAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367

Query: 585 YEYCKQGDSATA 596
               K G S  A
Sbjct: 368 SGLLKGGLSNEA 379



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 178/357 (49%), Gaps = 8/357 (2%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M + G +P + T   L+ GLC K     A +LF ++V+   ++P+V TY+ +I+G CK  
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKM-GHEPDVITYSTIINGLCKMG 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A  LL++M+E+G  PN   Y ++I   CK      A D    M KEG  P+++ Y+
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +I+ G C  GRV EA  L K+  +R +  +K+T+TIL+    K+    +A  +F  M + 
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL PD++ Y  L+  +C + +M E++K F      G  P   +Y  +I G+ + G I  A
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
                 M+     PD  TY  L+ G C+  +  EA +  + M   G+ P  +T   +   
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 587 YCKQGDSATAMIILESL-----DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            CK G    A  +L+++     +  ++I T+  LI  +C+  ++  A   F  L  K
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTI--LIEGMCTFGKLEAARELFSNLFVK 354


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 230/450 (51%), Gaps = 5/450 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ SF + G+++E   ++++M   G      T N +V      G +E A+E+  EM   G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A +Y  ++  YC  G++ EA R    ML RGA+    T   ++   C     G + 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK---WGRVS 312

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL+ MV K   P++ ++  LI G  + G   +AF LF +L R     P+V TY  +
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL-RFRGLVPSVVTYNTL 371

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+   ++ A  L + M + G  P+  T+T L+ G CK+GN   A +L D M   G 
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGL 431

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +AY   I G  K G   +A+ + ++   R    D ITY + +    K    K+A  
Sbjct: 432 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 491

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  GL PD   YT++I A      ++++   F E ++ G+FP+  TYT +I  Y 
Sbjct: 492 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYA 551

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A+ +F  M++ G  P+ ITY ALI+GLCK  K+D+A +F+  M  KGISP + 
Sbjct: 552 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKY 611

Query: 579 TRVTLAYEYCKQGDSATAMIILES-LDKKL 607
           T   L  E C  G    A+ + +  LD+++
Sbjct: 612 TYTILINENCNLGHWQEALRLYKDMLDREI 641



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             +V+  +  G L++   ++ EM   GL +   T + ++   CE G ++ A  + +EM +
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y  ++   C+ GRV++A + L  M+++  + D  +   LI  +      G+
Sbjct: 289 RGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR---LGN 345

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +AF L  E+  +G  P+V T+  LIDGLC+ G  + A RL  ++++     P+V T+T
Sbjct: 346 IGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP-DPDVFTFT 404

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+CK   +  A+ L + M  +GL P+   Y + I G  K+G+  +A+ + + M   
Sbjct: 405 ILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN  IDGL K G ++EA EL+KK     L  D +TYT ++  HL     ++A
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M+  G+ P +  YT LI ++  + ++K +   F E    G+ P   TY ++I G
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             +   +  A K+F  M   G +P+  TY  LI+  C      EA + Y+ M+ + I P 
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644

Query: 577 EVTRVTL 583
             T   L
Sbjct: 645 SCTHSAL 651



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 150/318 (47%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +MV KG  P++     ++  L  +  +    R    ++     +P V TY  M+  +CK+
Sbjct: 144 KMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K+  A  LL +M++ G LPN  TY  L+ G    G  E+A +L+  M + G   + Y Y
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + +I G C+KG++ EA  L ++   R      +TY  ++    K      A  L   MV 
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVN 323

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             L PD+ +Y TLI  + R   + E+   F E    GL P+  TY ++I G  R G++  
Sbjct: 324 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDV 383

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++    M + G  PD  T+  L+ G CK   L  A + ++ M+ +G+ P     +T   
Sbjct: 384 AMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443

Query: 586 EYCKQGDSATAMIILESL 603
              K GD + A  + E +
Sbjct: 444 GELKLGDPSKAFGMQEEM 461



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 175/364 (48%), Gaps = 10/364 (2%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNVHTYTAMISGYCKEEKM 348
           G+K +  T+ V++D L + G    A+ +  K+V  + +N   +V     ++  Y K+  +
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135

Query: 349 NRAEMLLERMKEQGLLP---NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +  ++  +M  +G+LP   N N    L+    +  + + A ++ ++M + G  P +  Y
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD--RDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++D  CK+G+VQEA +LL +  +     + +TY +L++      E +QA  L   M++
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL    + Y  LI  +C + ++ E+ +  +E ++ G  PT  TY +++ G  + G +S 
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A K    M      PD ++Y  LI G  +   + EA   +  +  +G+ P  VT  TL  
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             C+ GD   AM + + + K      + T   L+R  C    + MA   F ++L +    
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 643 DRVS 646
           DR +
Sbjct: 434 DRFA 437


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 222/433 (51%), Gaps = 8/433 (1%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           + EY  +++  +   G+  D  +Y  M++AYC+ G +  A R+   + + G  +D  T  
Sbjct: 159 MTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCN 218

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+  +C       +++A  LL  M   G + N Y++T+LI GLC+     +A  L   +
Sbjct: 219 ALLLGYCRT---SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMM 275

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V  D    N+HTYT +I G CKE +++ A  LL+ M  +G++P+  TY ++I G+CK G 
Sbjct: 276 VH-DGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  +  LM + GC P+ + YN++I GLC  G++ EA ELL  A  R      IT+T 
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTN 393

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L++ + K      AL +   M+ +    D+ AY  LI    ++ ++KE+++   E    G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P   TYTS+I GY + G + +A++ F+ M   GC P+  TYG+LI GL +  KL +A 
Sbjct: 454 LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKL 619
                M   GI+P  +T  TL    CK+ +   A  + E +++       +  N L   L
Sbjct: 514 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 573

Query: 620 CSEKRVGMAALFF 632
           C   R   A  F 
Sbjct: 574 CKSGRAEEAYSFL 586



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 161/629 (25%), Positives = 253/629 (40%), Gaps = 126/629 (20%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + GR+K+   +   M  NG      T N ++   C  G ++ AEE+ +   ARG
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC+  R+ +A R  S M+     LD     +LI     K     +K
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC---RLK 440

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A E L EM   G  PNV T+T +IDG CK G                     WT     
Sbjct: 441 EAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   P V TYT +I G CK+ + + A  L E M++ GL
Sbjct: 501 YGLIQDKKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559

Query: 364 LPNTN--------------------------------TYTSLIYGHCKVGNFERAYDLMD 391
            P+                                  TYTSL+ G  K GN + A  L++
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC  ++Y Y+ ++  LCK+ ++ EA  +L +     ++ + + YTI++SE +K+ 
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  LF  M+ +G  P    YT  I+++C+  +++E+E    E    G+ P   TY 
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPD------------------------------ 541
             I G    G I  A    +RM    C P+                              
Sbjct: 740 IFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNW 799

Query: 542 ---------------------NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
                                 +TY ++I+G CK ++L+EAC   + M+GK ISP E   
Sbjct: 800 IELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 859

Query: 581 VTLAYEYCKQ---GDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L    C     G + + +  +     +  + + + LI  LC E     A   F  LLG
Sbjct: 860 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDL 666
            D N + V+   L +   ++      S L
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQL 948



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 224/473 (47%), Gaps = 11/473 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ ++ + G L         +  +G+ + T T N ++   C    +  A  +   M   G
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY +++   C    V EA   +  M+  G  L+  T TLLI   C +G    I 
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEG---RIH 301

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EM  +G  P+V+T+  +IDG CK G  + A  +   L+  +   P+  TY ++
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNGCNPDDWTYNSL 360

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C   K++ AE LL     +G  P   T+T+LI G+CK    + A  +   M    C
Sbjct: 361 IYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNC 419

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++ AY  +I+ L KK R++EA E L + F   L  + +TYT ++  + K      AL 
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALE 479

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M   G +P+   Y +LI    + KK+ ++     +    G+ P   TYT++I G  
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC 539

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +     +A + F+ M Q G  PD   Y  L   LCK  + +EA   Y  ++ KG+   +V
Sbjct: 540 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKV 596

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
           T  +L   + K G++  A +++E +     K  + T + L++ LC +K++  A
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 190/452 (42%), Gaps = 58/452 (12%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L +  +++ +M  +G+     T   ++   C+    + A  +F+ M   G+  D  +Y 
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++  A C+ GR  EA    S ++ +G +L   T T L+  F   G   +   A  L+E+M
Sbjct: 568 VLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAG---NTDFAAVLIEKM 621

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G K ++YT++VL+  LCK+    +A  +  ++  S   K N+  YT +IS   KE K
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS-GVKCNIVAYTIIISEMIKEGK 680

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A+ L   M   G  P+  TYT  I  +CK+G  E A  L+  M ++G TP++  YN 
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA---------------- 451
            I+G    G +  A+  LK+      + +  TY +LL   LK +                
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWI 800

Query: 452 ETKQALGLFCRMVKAGLNPDI-----------------------------------HAYT 476
           E      L  RM+K GLNP +                                     YT
Sbjct: 801 ELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 860

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI   C  K   ++  F  + I  G  P  E+Y  +I G   +G+   A   F  +  +
Sbjct: 861 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               + + +  L  GL K   +D   Q   +M
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 147/318 (46%), Gaps = 25/318 (7%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L E  S++ +MT +G+         ++    + G  ++A+ +F+EM + G    A++Y 
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC++GR+ EA+  +  M   G   D  T  + I      G  G I +AF  L+ M
Sbjct: 705 VFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGC---GHMGYIDRAFSTLKRM 761

Query: 288 VRKGWKPNVYTHTVLIDGLCKK--------------GWTE--KAFRLFLKLVRSDNYKPN 331
           V    +PN +T+ +L+    K                W E    ++L  ++++     P 
Sbjct: 762 VDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKH-GLNPT 820

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY+++I+G+CK  ++  A +LL+ M  + + PN   YT LI   C +  F +A   + 
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 880

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P + +Y+ +I GLC +G    A  L       +   +++ + IL    LK  
Sbjct: 881 DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940

Query: 452 ETKQALGLFCRMVKAGLN 469
                   FC  + A ++
Sbjct: 941 HVD-----FCSQLLAAMD 953



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 7/211 (3%)

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A + +++   + L      Y + L   L+   T+    L+  +V+ GL PD   Y T+I
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            A+C++  +  + ++F     +G+     T  +++ GY R  ++  A      M  +GC 
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            +  +Y  LI GLC+   + EA      M+  G S    T   L    CK+G    A  +
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 600 LESLDKK-----LWIRTVNTLIRKLCSEKRV 625
           L+ +  +     +W  T N +I   C   R+
Sbjct: 307 LDEMPLRGVVPSVW--TYNAMIDGYCKSGRM 335


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           + +AE VF EM    V  +  +Y +++  +C  G +  A      M  +G + +  T   
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +C       I   F+LL  M  KG +PN+ ++ V+I+GLC++G  ++   +  ++ 
Sbjct: 246 LIDGYCK---LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R   Y  +  TY  +I GYCKE   ++A ++   M   GL P+  TYTSLI+  CK GN 
Sbjct: 303 RR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            RA + +D M   G  PN   Y  ++DG  +KG + EAY +L++          +TY  L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++ H    + + A+ +   M + GL+PD+ +Y+T+++ FCR   + E+ +  +E +  G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY+S+I G+        A   ++ M ++G  PD  TY ALI+  C +  L++A Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            +  M+ KG+ P                D  T  +++  L+K+   R    L+ KL  E+
Sbjct: 542 LHNEMVEKGVLP----------------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
            V  + + +H L+    N++  S+ +L
Sbjct: 586 SVP-SDVTYHTLIENCSNIEFKSVVSL 611



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 238/487 (48%), Gaps = 24/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F   G +    ++  +M   G LP +  T N ++   C+L  ++   ++   M  +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVV-TYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  SY +++   CR GR+ E    L+ M  RG  LD  T   LI  +C +G   + 
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG---NF 326

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA  +  EM+R G  P+V T+T LI  +CK G   +A   FL  +R     PN  TYT 
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTT 385

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+ ++  MN A  +L  M + G  P+  TY +LI GHC  G  E A  +++ M ++G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P++ +Y+ ++ G C+   V EA  + ++  ++ ++ D ITY+ L+    +Q  TK+A 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M++ GL PD   YT LI A+C +  ++++ +   E +  G+ P   TY+ +I G 
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEAC 562
            +      A +   ++      P ++TY                +LI G C +  + EA 
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKL 619
           Q +ESM+GK   P       + + +C+ GD   A  + + + K    L   TV  L++ L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685

Query: 620 CSEKRVG 626
             E +V 
Sbjct: 686 HKEGKVN 692



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 205/390 (52%), Gaps = 12/390 (3%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK----GWTEKAFRLFLKLVRSDNYKPNV 332
           I +A  ++      G+ P V ++  ++D   +      + E  F+  L+        PNV
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE----SQVSPNV 205

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G+C    ++ A  L ++M+ +G LPN  TY +LI G+CK+   +  + L+  
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  PN+ +YN +I+GLC++GR++E   +L +  +R    D++TY  L+  + K+  
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             QAL +   M++ GL P +  YT+LI + C+   M  + +F  +    GL P + TYT+
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G+ + G ++ A +  + MN  G +P  +TY ALI+G C   K+++A    E M  KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAA 629
           +SP  V+  T+   +C+  D   A+ +  E ++K +   T+  ++LI+  C ++R   A 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
             + ++L      D  +  AL NA C E +
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGD 535



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 225/476 (47%), Gaps = 58/476 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++ ++ +GF ++  M   GL     + N V+   C  G ++    V  EM  RG
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  YC+ G   +A    + ML  G      T T LI + C  G   ++ 
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG---NMN 362

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E L++M  +G  PN  T+T L+DG  +KG+  +A+R+ L+ +  + + P+V TY A+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV-LREMNDNGFSPSVVTYNAL 421

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C   KM  A  +LE MKE+GL P+  +Y++++ G C+  + + A  +   M ++G 
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+++I G C++ R +EA +L ++  +  L  D+ TYT L++ +  + + ++AL 
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 459 LFCRMVKAGLNPDIHAYT------------------------------------------ 476
           L   MV+ G+ PD+  Y+                                          
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 477 --------TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                   +LI  FC +  M E+++ F+  +     P    Y  MI G+ R G+I  A  
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            ++ M + G     +T  AL+  L K+ K++E      S+I   +  CE++    A
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNE----LNSVIVHVLRSCELSEAEQA 713



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 176/408 (43%), Gaps = 65/408 (15%)

Query: 129 FRHFMRLYIVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRL 169
            RH +   ++  TSLI +    GN  RA E +  M               V  F++ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
            E + ++ EM +NG      T N ++   C  G +E A  V ++M  +G+  D  SY  +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------- 272
           +  +CR   V EA R    M+++G   D  T + LI  FC++                  
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516

Query: 273 ---------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                            G +++A +L  EMV KG  P+V T++VLI+GL K+  T +A R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576

Query: 318 LFLKLVRSDNYKPNVHTYT--------------AMISGYCKEEKMNRAEMLLERMKEQGL 363
           L LKL   ++   +V  +T              ++I G+C +  M  A+ + E M  +  
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y  +I+GHC+ G+  +AY L   M K G   +     A++  L K+G+V E   
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           ++    +    ++     +L+  + ++      L +   M K G  P+
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 12/259 (4%)

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR-VQEAYELL 425
           ++ +  ++  + ++   ++A  ++ L    G  P + +YNA++D   +  R +  A  + 
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           K+  + ++  +  TY IL+           AL LF +M   G  P++  Y TLI  +C+ 
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           +K+ +  K  +     GL P   +Y  +I G  R+G +         MN+ G + D +TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             LI G CK+    +A   +  M+  G++P  +T  +L +  CK G+   AM  L+ +  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR- 372

Query: 606 KLWIRTVNTLIRKLCSEKR 624
                     +R LC  +R
Sbjct: 373 ----------VRGLCPNER 381


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 232/447 (51%), Gaps = 4/447 (0%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    ++G     + ++  +     PL     N V+   C+ G+++ A EVF EM   G+
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  SY +++  +CR GRV +A      M + G + +  + ++LI  FC +G    + +
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEG---RVDK 368

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A E+ EEM   G  P+VY++++LIDG C+KG  + A + F + + S+N+ P+   Y ++I
Sbjct: 369 ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK-FWEEMTSNNFSPSAFNYCSLI 427

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            GY K ++   A      M++ G+ P+T     ++  +C+  +F +A  L +   + G  
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N Y+YN  I  +C+    ++A +LL    +R +  D + Y+ L+S   K+  +++A+ L
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M K G+  ++  YT LI  F    KM  + + F+    + ++P +  YTS++ G+  
Sbjct: 548 FIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCN 607

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A   F  M++ GC+P+ +TY   I+   K +K ++A + YE M  +G+ P ++ 
Sbjct: 608 TGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQIL 667

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
              L   +C  G+   A  + + + ++
Sbjct: 668 YTMLIAAFCNTGEMNRAEALFDEMKQE 694



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 219/474 (46%), Gaps = 9/474 (1%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           ++E+A  VF      G+  +  S   ++       RV         ++  G   +  T T
Sbjct: 151 MLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYT 210

Query: 263 LLITAFCDK-GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           +++  FC   G    I++A E+L ++   G  PNV T+   I GLCK G    A+RL   
Sbjct: 211 IMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQN 270

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           L R  N   N H + A+I G C+   ++ A  + + MK  G+LP+  +Y+ LI G C+ G
Sbjct: 271 LCRK-NQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKG 329

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             ++A ++   M   G  PNIY+Y+ +IDG CK+GRV +A E+ ++     +  D  +Y+
Sbjct: 330 RVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYS 389

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL+    ++ +   A+  +  M     +P    Y +LI  + + K+   + K F+     
Sbjct: 390 ILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKL 449

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G++P       ++  Y R  + + A+   ++  + G   +  +Y   I  +C+ S  ++A
Sbjct: 450 GMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKA 509

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
            Q    M+ + + P  V   TL   + K+ +S  A+++   + K      ++T   LI  
Sbjct: 510 LQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINL 569

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLSQ 668
             S+ ++ +A   F  +       D+++    +A   N    +   ALF ++S+
Sbjct: 570 FISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR 623



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 161/379 (42%), Gaps = 69/379 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + GR+ +   +  EM N+G+     + + ++   C  G ++ A + ++EM +  
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
               A +Y  ++  Y +  +   A +    M   G   D      +++ +C K       
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 273 -------------------------FRGSI-KQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                     RGS+ ++A +LL  M+++   P+V  ++ LI   
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K+  +EKA  LF+K+ +      NV TYT +I+ +  + KM+ A  L + MKE  + P+
Sbjct: 536 AKRLNSEKAVMLFIKMTKV-GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPD 594

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YTSL+ G C  G   RA  L D M +EGC+PN+  Y   I+   K  +  +A++L +
Sbjct: 595 QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 654

Query: 427 KAFQRELQADKITYTILL------------------------------------SEHLKQ 450
           K  +R +  D+I YT+L+                                    + ++K 
Sbjct: 655 KMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKL 714

Query: 451 AETKQALGLFCRMVKAGLN 469
            +  QA  L+  M   GL+
Sbjct: 715 NKRDQAEKLYEEMRAKGLS 733



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 5/240 (2%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E A  +F +M   G+  +  +Y +++  +    ++  A R    M +     D    T L
Sbjct: 542 EKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSL 601

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  FC+ G    + +A  L +EM R+G  PNV T+T  I+   K     +A +L+ K+  
Sbjct: 602 VAGFCNTG---EMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNF 383
              Y P+   YT +I+ +C   +MNRAE L + MK++G   PN   YT LI  + K+   
Sbjct: 659 RGVY-PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKR 717

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ++A  L + M  +G +    +  ++ +  C + +V +  +L  +A Q      ++ YT+L
Sbjct: 718 DQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGKLGGRAKQGLDWRFQVKYTLL 777


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 222/477 (46%), Gaps = 33/477 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  E GR  E  ++  EM   G      T   ++   C+   +E    + DEM  +G
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++  YC+ G V  A   L  M       +  T   LI  FC K    ++ 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK---NVH 196

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL +M+     P+V T+  LI G CK G+ + A+RL L L+  +   P+  TY+  
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL-LNLMNENGVVPDQWTYSVF 255

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK+ ++  A +L   +KE+G+  N   YT+LI G+CK G  + A  L+D M  E C
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   YNA+IDGLCK+ +VQEA  L++   Q+ L+    TYTIL+   LK+ +   A  
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +MV +G  PD++ YT  I AFC +  +KE+E         G+ P   TYT +I  Y 
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS---------------------- 556
             G ++ A    +RM   GC P + TY  LI  L K+                       
Sbjct: 436 GLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADV 495

Query: 557 -------KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
                  K + A + +E M+  G SP   T   L    CK G    A  + + ++++
Sbjct: 496 ADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER 552



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 218/430 (50%), Gaps = 13/430 (3%)

Query: 159 MVSSFAEIGRLKEG---------FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           MV+ + ++G L E          FS+   M   G      +   ++   CE+G V+    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +M          +Y ++V A    GR  EA    S M +RG   +  T T++I A C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            +     +++   +L+EMV KG  P+V T+  LIDG CK+G  E A  + L L+ S++  
Sbjct: 121 KET---KLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEI-LDLMHSNSCN 176

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  TY  +I G+C+++ ++RA  LL +M E  L P+  TY SLI+G CK+G  + AY L
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++LM + G  P+ + Y+  ID LCKKGR++EA  L     ++ ++A+++ YT L+  + K
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   A  L  RM+     P+   Y  LI   C+++K++E+    +  I  GL  T  T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT +I   L++G+   A +   +M   G  PD   Y A I   C +  + EA      M 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 570 GKGISPCEVT 579
            +G+ P  +T
Sbjct: 417 ERGVMPDALT 426



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 188/384 (48%), Gaps = 13/384 (3%)

Query: 229 MVVAYCRMGRVTEAD---------RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
           MV  YC++G + EA+            + M  +G   +  + T LI   C+ G    + +
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVG---RVDE 57

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              + ++M      P V T+TV++  L + G   +A  LF ++ R    +PN+HTYT MI
Sbjct: 58  GINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMI 116

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +  CKE K+     +L+ M E+GL+P+  TY +LI G+CK G  E A +++DLM    C 
Sbjct: 117 NAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN 176

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   YN +I G C+K  V  A  LL K  +  L    +TY  L+    K      A  L
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M + G+ PD   Y+  I   C++ +++E+   F      G+   +  YT++I GY +
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A     RM    C P++ TY ALI GLCK+ K+ EA    ESMI KG+     T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 580 RVTLAYEYCKQGDSATAMIILESL 603
              L     K+GD   A  IL+ +
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQM 380



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 245/531 (46%), Gaps = 50/531 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+++  +  +L+EG  ++ EM   GL     T N ++   C+ G+VE A+E+ D M +  
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  +CR   V  A   LS ML+        T   LI   C  G+   + 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGY---LD 231

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ LL  M   G  P+ +T++V ID LCKKG  E+A  LF  L +    K N   YTA+
Sbjct: 232 SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL-KEKGIKANEVIYTAL 290

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC-------------------- 378
           I GYCK  KM+ A  LL+RM  +  LPN++TY +LI G C                    
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350

Query: 379 ---------------KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                          K G+F+ A+ ++D M   G  P++Y Y A I   C +G ++EA +
Sbjct: 351 KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAED 410

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           ++   F+R +  D +TYT+++  +        A  +  RM   G +P  H Y+ LI    
Sbjct: 411 MMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLL 470

Query: 484 RQKKMKESEKF-FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           +++  K+ +     ++I    F        M+          +A++ F++M + GC+P+ 
Sbjct: 471 KEELTKKYKNVALCDSIPNVFFADVADVWKMM-------KFETALELFEKMLEHGCSPNI 523

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY  LI GLCK  +L  A + ++ M  +G+SP E    +L    C+ G    A+ ++ +
Sbjct: 524 NTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA 583

Query: 603 LDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + +      + ++N L   L  E     A + F  LL    N D V+   L
Sbjct: 584 MMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKIL 634



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 150/344 (43%), Gaps = 33/344 (9%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +++E   ++  M   GL     T   ++    + G  +YA  + D+M + G   D   Y 
Sbjct: 334 KVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYT 393

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             + A+C  G + EA+  +S M +RG + D  T TL+I A+   G  G +  AF++L+ M
Sbjct: 394 AFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY---GGLGLLNPAFDVLKRM 450

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEK-----------------------------AFRL 318
              G  P+ +T++ LI  L K+  T+K                             A  L
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALEL 510

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F K++      PN++TY  +I G CK  ++  A+ L + M E+G+ P+   Y SL+   C
Sbjct: 511 FEKMLEH-GCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G +  A  L+  M + G  P + + N +  GL ++G  ++A  +     Q     D++
Sbjct: 570 ELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEV 629

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            + IL+   LK   +     L   M   G       Y  LI   
Sbjct: 630 AWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 54/212 (25%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           +V+A LN D+++      AF            F      G    + +YT++I G    G 
Sbjct: 11  LVEANLNNDVNS------AF----------SVFNMMPKKGCRRNEVSYTNLIHGLCEVGR 54

Query: 523 ISSAVKYFQRMNQI-----------------------------------GCAPDNITYGA 547
           +   +  F++M +                                    GC P+  TY  
Sbjct: 55  VDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +I+ +CK++KL+E  +  + M+ KG+ P   T   L   YCK+G    A  IL+ +    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 608 WI---RTVNTLIRKLCSEKRVGMAALFFHKLL 636
                RT N LI   C +K V  A     K+L
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKML 206


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 219/438 (50%), Gaps = 9/438 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + Q ++ + +E  R+ E   ++ EM   G      T N V+   C+ G +  A ++ D M
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRM 296

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R   ADA     ++   CRMG+V EA   LS + +   +L N  +   + +       
Sbjct: 297 LLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVS------- 349

Query: 275 GSIKQAFELL-EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G  ++A +LL + MV  G++P+ +T  ++IDGLCKKG+   A     ++V+   ++PNV 
Sbjct: 350 GRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVI 408

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYT +I G+CK+     A  ++  M  +GL  NT  Y  LI   CK G  + A  +   M
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +GC P+IY +N++I GLCK  +++EA  L +      + A+ +TY  L+   L+    
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +QA  L   M   G   D   Y  LI A C+    ++     ++     +FP+  +   +
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R G ++ A+++ + M Q G  PD +TY +LI+GLCK  +  EA   +  +  KGI
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648

Query: 574 SPCEVTRVTLAYEYCKQG 591
            P  VT  TL   YC +G
Sbjct: 649 HPDAVTYNTLISRYCYEG 666



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 226/503 (44%), Gaps = 42/503 (8%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  VF +M +RG+     ++ +++ A+C +  V  A   L  M   G + ++    +LI 
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A  +      + +A +LLEEM   G +P+V T   +I GLCK G   +A +L  +++  D
Sbjct: 244 ALSE---NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300

Query: 327 --------NY----------------------KPNVHTYTAMISGYCKEEKMNRA-EMLL 355
                    Y                       PN   Y  +I+GY    +   A ++L 
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + M   G  P+  T+  +I G CK G    A + +D M K+G  PN+  Y  +IDG CK+
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQ 420

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G  +EA +++     + L  + + Y  L+    K  + + AL ++  M   G  PDI+ +
Sbjct: 421 GHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTF 480

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            +LI   C+  KM+E+   +++ +  G+     TY ++I  +LR   I  A K    M  
Sbjct: 481 NSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            GC  DNITY  LI  LCK    ++     E M G+ I P   +   L   +C+ G    
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVND 600

Query: 596 AMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-K 651
           A+  L  + ++     I T N+LI  LC   R   A   F+ L  K  + D V+   L  
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660

Query: 652 NACYESNKYALFSDLSQRIAEGI 674
             CYE     LF+D  Q + +G+
Sbjct: 661 RYCYE----GLFNDACQLLFKGV 679



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG       Y L++     +G     D+ L  M D G +   +   L++  +   G  G 
Sbjct: 88  RGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG- 146

Query: 277 IKQAFELLEEMVRKGW-----KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
             QA  LL +M    W     +P   ++ V+++ L      + A  +F  ++ S    P 
Sbjct: 147 --QATRLLLDM----WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDML-SRGISPT 199

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V+T+  ++  +C   +++ A  LL  M + G +PN+  Y  LI+   +      A  L++
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLE 259

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   GC P++  +N +I GLCK GR+ EA +L  +   R+  AD +    L+    +  
Sbjct: 260 EMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMG 319

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK-FFQEAITAGLFPTKETY 510
           +  +A  +  ++     NP+   Y TLI  +    + +E++   ++  + AG  P   T+
Sbjct: 320 KVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTF 375

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             MI G  + G + SA+++   M + G  P+ ITY  LI G CKQ   +EA +   SM  
Sbjct: 376 NIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           KG+S   V    L    CK G    A+ +   + S   K  I T N+LI  LC   ++  
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495

Query: 628 AALFFHKLL 636
           A   +  +L
Sbjct: 496 ALGLYRDML 504



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 33/334 (9%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        M+    + G L      + EM   G      T   ++   C+ G  E A 
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +V + M A+G+  +   Y  ++ A C+ G++ +A +    M  +G   D  T   LI   
Sbjct: 428 KVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487

Query: 269 C-------------DKGFRGS-------------------IKQAFELLEEMVRKGWKPNV 296
           C             D    G                    I+QA +L+ EM  +G   + 
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T+  LI  LCK G TEK   L  ++   + + P++++   +I+ +C+  K+N A   L 
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIF-PSINSCNILINSFCRTGKVNDALQFLR 606

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M ++GL P+  TY SLI G CK+G F+ A +L + +  +G  P+   YN +I   C +G
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
              +A +LL K        ++IT++IL++  +K 
Sbjct: 667 LFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/408 (21%), Positives = 149/408 (36%), Gaps = 79/408 (19%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL------------- 364
           LF K      Y  + H Y  +I       +    + LL++MK++G +             
Sbjct: 80  LFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYY 139

Query: 365 -----------------------PNTNTYTS----LIYGHCKVGNFERAYDLMDLMGKEG 397
                                  P   +Y      L+ G+C        YD++      G
Sbjct: 140 GKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDML----SRG 195

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P +Y +  ++   C    V  A  LL+   +     + I Y +L+    +     +A+
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAM 255

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK---------FFQEAITAGLF---- 504
            L   M   G  PD+  +  +I   C+  ++ E+ K         F  +A+  G      
Sbjct: 256 KLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGL 315

Query: 505 ------------------PTKETYTSMICGYLRDGNISSAVK-YFQRMNQIGCAPDNITY 545
                             P    Y ++I GY+  G    A    ++ M   G  PD  T+
Sbjct: 316 CRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTF 375

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             +I GLCK+  L  A +F + M+ KG  P  +T   L   +CKQG    A  ++ S+  
Sbjct: 376 NIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435

Query: 606 K-LWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K L + TV  N LI  LC + ++  A   + ++  K    D  +  +L
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/443 (32%), Positives = 225/443 (50%), Gaps = 6/443 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C+++S    G+ +    +V EM   G      T N +V    + G  + A  +  EM   
Sbjct: 49  CLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN 108

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++    + GR++EA    + M +RG + D  T   LI      G  G  
Sbjct: 109 GCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGL---GKVGRS 165

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A ELLEEM R G  P+V T++ LI GL K G T KAF+LF ++ R    KP+  T+TA
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRR-GRKPDSITFTA 224

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++    K  +++ A  LL+ MKE+G+ P   TY +LI G  KVG+   AY+L+D M + G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P++  Y+ +I GL K  ++ EA ++LKK  +     D ITY  L++   K      A 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF RM   G NPD+  Y+TLI A  +  +++ +   F+E  + G+ P   TY S+I   
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A + F  M   G +PD ITY A ++ L +  +  EA + +E M   G+ P  
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 578 VT--RVTLAYEYCKQGDSATAMI 598
            T   + L     K+ D A  ++
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLL 487



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 11/451 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++ A  + G+  EA      +       D  + + LI +    G  G  + A E++
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSL---GRAGKWEAALEVV 67

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM  KG KPN++T+  L+D L K G  ++A RL  ++ R +   P+V TY  +IS   K
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM-RDNGCVPDVRTYNCLISTLGK 126

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +++ A  L   M+E+G +P+T TY SLIYG  KVG  ++A +L++ M + GC P++  
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+++I GL K G   +A++L ++  +R  + D IT+T L+    K      AL L   M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P +  Y  LIA F +   + E+     E    G  P   TY+ +I G ++   + 
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +  ++M + GC PD ITY  LI+GL K   L++A + ++ M  KG +P  VT  TL 
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 585 YEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
               K     +A ++ E ++    +  + T  ++I  L    +V  A   F ++ GK  +
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 642 VDRVSLAALKNACYESNKY----ALFSDLSQ 668
            D ++  A  N+     ++     +F D+ +
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 217/487 (44%), Gaps = 74/487 (15%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++S+  + GRL E F++  EM   G    T T N ++    ++G  + A E+ +EM  
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   D  +Y  ++    + G   +A +    M  RG   D+ T T L+ A    G  G 
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL---GKAGR 234

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A ELL+EM  +G KP V T+  LI G  K G   +A+ L  ++ R +  KP+V TY+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR-NGCKPDVVTYS 293

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G  K  +++ A  +L++M+++G  P+T TY +LI G  K G    A  L D M  +
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA----------------------YELLKKAFQ---- 430
           GC P++  Y+ +I  L K  RV+ A                        +L KA Q    
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 431 ---------RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                    + L  D ITY   L+   +    K+A  +F  M ++GL PD+  Y  L+  
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLG 473

Query: 482 FCRQKKMK-----------------------------------ESEKFFQEAITAGLFPT 506
             + K++                                    E+ +  Q A + GL+P 
Sbjct: 474 LSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPG 533

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y ++I    + G +S A    + + + G  PD ++Y +LIS L +  ++D A +  E
Sbjct: 534 ASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLE 593

Query: 567 SMIGKGI 573
            M  +G+
Sbjct: 594 EMSKRGL 600



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV TY ++++   K  +   A++L E +K     P+  +Y+ LI    + G +E A ++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +GC PN++ YN ++D L K G+  EA  LL +        D  TY  L+S   K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +A  LF  M + G  PD   Y +LI    +  + +++ +  +E    G  P   T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+S+I G  +DG    A K FQ M + G  PD+IT+ AL+  L K  ++D+A +  + M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVG 626
            +G+ P  VT   L   + K GD   A  +L+ + +   K  + T + LI  L    ++ 
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSD 665
            A     K+  +    D ++   L N      K  L +D
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGL---GKAGLLND 342



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 172/356 (48%), Gaps = 4/356 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F ++G L E ++++ EM  NG      T + ++    +   ++ A +V  +M   G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++    + G + +A R    M  +G   D  T + LITA    G    ++
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL---GKAARVE 376

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L EEM   G +P+++T+  +I  L K G  + A RLF ++ R     P+V TY A 
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAF 435

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++   +  +   A  + E MKE GLLP+  TY +L+ G  K    + A  L+  + ++GC
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   ++  ++ L   G V EA+ELL+ A  + L     +Y  L+    K     +A  
Sbjct: 496 AFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFN 555

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
               + + G  PDI +Y++LI+A  +  ++  + +  +E    GL  +  +Y++++
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 98/208 (47%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  YN++++ L K G+ +EA  L ++    +   D ++Y+ L++   +  + + AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M   G  P++  Y TL+    +  +  E+ +   E    G  P   TY  +I    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +S A   F  M + GC PD  TY +LI GL K  +  +A +  E M   G  P  +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T  +L     K G++  A  + + + ++
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRR 213


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 214/421 (50%), Gaps = 5/421 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N +V    + G +E ++ +  ++   G+  D+S Y +MV + C  G
Sbjct: 377 EMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAG 436

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ EA + L  +L++G  L       LI A+   G      +AFE    MVR G+ P+  
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE---DKAFEAYRIMVRCGFTPSSS 493

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T   L+ GLC+KGW ++A R+ L  +    +  N   YT ++ GY K   +  A+ L + 
Sbjct: 494 TCNSLLMGLCRKGWLQEA-RILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKE 552

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           MKE+G+ P+   +T+LI G  K GN E AY++   M   G  PN +AYN++I GLC  GR
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V EA +L K+  Q+ L +D  T+ I++    ++ + K A+  F  M + GL PDI  +  
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNI 672

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  +C+   M  + +   +  + GL P   TY + + GY R   ++ AV    ++   G
Sbjct: 673 LIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAG 732

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD +TY  ++SG+C    LD A      ++  G  P  +T   L   +CKQG    A+
Sbjct: 733 IVPDTVTYNTMLSGICSDI-LDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL 791

Query: 598 I 598
           I
Sbjct: 792 I 792



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 212/463 (45%), Gaps = 13/463 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G    A +    M   GV    +++  ++ A CR G V EA +    +
Sbjct: 284 TFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI 343

Query: 250 LDRGAILDNATLTLLITAFCDKGFRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            D G   + A    L+  +    F+   + QA  L EEM   G  P+  T  +L+ G  K
Sbjct: 344 QDMGIAPNAAIYNTLMDGY----FKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK 399

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  E + RL   L+ S  +  +   Y  M+S  C   +++ A  LL+ + E+GL  +  
Sbjct: 400 YGRIEDSDRLLKDLIVSGLFL-DSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVV 458

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            + SLI  + + G  ++A++   +M + G TP+    N+++ GLC+KG +QEA  LL + 
Sbjct: 459 AFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRM 518

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++    +K+ YT+LL  + K    + A  L+  M + G+ PD  A+T LI    +   +
Sbjct: 519 LEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNV 578

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           +E+ + F E    G  P    Y S+I G    G ++ A+K  + M Q G   D  T+  +
Sbjct: 579 EEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNII 638

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE-----SL 603
           I G C++ ++  A + +  M   G+ P   T   L   YCK  D   A  I+       L
Sbjct: 639 IDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGL 698

Query: 604 DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           D    I T NT +   C  +++  A +   +L+      D V+
Sbjct: 699 DPD--ITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVT 739



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 7/483 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E    V+  ++  F  +G   E   ++  M   G+    S++  ++ +   +G      
Sbjct: 173 YESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVW 232

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++F +M  +G      ++  M+  +CR  RV   +  L  M       D  T  +LI A 
Sbjct: 233 KLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINAC 292

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C     G    A + L  MVR G +P+V T T ++  LC++G   +A +LF   ++    
Sbjct: 293 C---IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLF-DGIQDMGI 348

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN   Y  ++ GY K  ++ +A +L E M+  G+ P+  T+  L++GH K G  E +  
Sbjct: 349 APNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDR 408

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  +   G   +   Y+ ++  LC  GR+ EA +LL++  ++ L    + +  L+  + 
Sbjct: 409 LLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYS 468

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +     +A   +  MV+ G  P      +L+   CR+  ++E+       +  G    K 
Sbjct: 469 RAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKV 528

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT ++ GY +  N+  A   ++ M + G  PD + + ALI GL K   ++EA + +  M
Sbjct: 529 AYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM 588

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRV 625
              G  P      +L    C  G    A+ + + + +K  +    T N +I   C   ++
Sbjct: 589 SAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQM 648

Query: 626 GMA 628
             A
Sbjct: 649 KFA 651



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 5/242 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G VE A EVF EM A G   +  +Y  ++   C  GRVTEA +    M  +G + D  T 
Sbjct: 576 GNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTF 635

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            ++I  FC    RG +K A E   +M R G  P+++T  +LI G CK      A  +  K
Sbjct: 636 NIIIDGFCR---RGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNK 692

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +  S    P++ TY   + GYC+  KMN+A ++L+++   G++P+T TY +++ G C   
Sbjct: 693 MY-SCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-D 750

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +RA  L   + K G  PN+   N ++   CK+G  ++A    +K  +     D+I+Y 
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYR 810

Query: 442 IL 443
           IL
Sbjct: 811 IL 812



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 5/317 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L+E   ++  M   G P+       ++    ++  +E A+ ++ EM  RG+  DA ++
Sbjct: 506 GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAF 565

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++    + G V EA      M   G + +N     LI   CD G    + +A +L +E
Sbjct: 566 TALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG---RVTEALKLEKE 622

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +KG   + +T  ++IDG C++G  + A   FL + R     P++ T+  +I GYCK  
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRI-GLLPDIFTFNILIGGYCKAF 681

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M  A  ++ +M   GL P+  TY + ++G+C++    +A  ++D +   G  P+   YN
Sbjct: 682 DMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYN 741

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G+C    +  A  L  K  +     + IT  +LLS   KQ   ++AL    ++ + 
Sbjct: 742 TMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREI 800

Query: 467 GLNPDIHAYTTLIAAFC 483
               D  +Y  L  A+C
Sbjct: 801 SFGFDEISYRILDQAYC 817



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 173/403 (42%), Gaps = 36/403 (8%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D + L  L+  F + G      +A E+L  M   G +P + + T+L+  L + G     +
Sbjct: 176 DFSVLNTLLRGFLNVGMG---FEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVW 232

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           +LF  ++     +P+  T+ AMI G+C++ ++   E LL  M +    P+  T+  LI  
Sbjct: 233 KLFKDMIFKGP-RPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINA 291

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C  G    A D + LM + G  P++  +  I+  LC++G V EA +L        +  +
Sbjct: 292 CCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPN 351

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
              Y  L+  + K  E  QA  L+  M   G++PD   +  L+    +  ++++S++  +
Sbjct: 352 AAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLK 411

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + I +GLF     Y  M+      G +  A+K  Q + + G     + + +LI    +  
Sbjct: 412 DLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
             D+A + Y  M+  G +P                                   T N+L+
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSS--------------------------------STCNSLL 499

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
             LC +  +  A +  +++L K   +++V+   L +  ++ N 
Sbjct: 500 MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 24/260 (9%)

Query: 138 VCATSLISN----GNFERAHEVM---------------QCMVSSFAEIGRLKEGFSMVIE 178
           V  T+LI      GN E A+EV                  ++    + GR+ E   +  E
Sbjct: 563 VAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKE 622

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL   T T N ++   C  G +++A E F +M   G+  D  ++ +++  YC+   
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A   ++ M   G   D  T    +  +C       + QA  +L++++  G  P+  T
Sbjct: 683 MVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMR---KMNQAVIILDQLISAGIVPDTVT 739

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  ++ G+C     ++A  L  KL++   + PNV T   ++S +CK+    +A +  +++
Sbjct: 740 YNTMLSGICSD-ILDRAMILTAKLLKM-GFIPNVITTNMLLSHFCKQGMPEKALIWGQKL 797

Query: 359 KEQGLLPNTNTYTSLIYGHC 378
           +E     +  +Y  L   +C
Sbjct: 798 REISFGFDEISYRILDQAYC 817


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 231/471 (49%), Gaps = 20/471 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +  +M    +   T+ +N +    C  G V  A  + D M   G+  +  +Y 
Sbjct: 162 RVSEALDLFHQMCRPNVVTFTTLMNGL----CREGRVVEAVALLDRMVEDGLQPNQITYG 217

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEE 286
            +V   C++G    A   L  M +   I  N    ++ +A  D  ++ G    A  L  E
Sbjct: 218 TIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV---VIYSAIIDGLWKDGRHSDAHNLYTE 274

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  P+++T+  +IDG C  G   +A RL  +++      PNV TY+A+I+ Y KE 
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER-KINPNVVTYSALINAYVKER 333

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   AE L + M  +G++PNT TY S+I G CK    + A  +  +M  +GC+P+++ +N
Sbjct: 334 KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFN 393

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG C   R+ +  ELL +  +  L AD  TY  L+       +   AL L  +M+ +
Sbjct: 394 TLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS 453

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-----------GLFPTKETYTSMIC 515
           G+ PDI    TL+   C   K+K++ + F+    +           G+ P  +TY  +I 
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G + +G    A + ++ M   G  P+ ITY ++I+GLCKQS+LDEA Q ++SM  K  SP
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 573

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
             VT  TL   YCK G     + +   + ++  +    T I  +   ++VG
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 195/397 (49%), Gaps = 28/397 (7%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  ++ EM  +G+  D  +Y  M+  +C  GR +EA R L  ML+R    +  T + LI 
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A+  +       +A EL +EM+ +G  PN  T+  +IDG CK+   + A  +F  ++ + 
Sbjct: 328 AYVKER---KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFY-VMATK 383

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V T+  +I GYC  ++++    LL  M E GL+ +T TY +LI+G C VG+   A
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAA 443

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            DL   M   G  P+I   N ++DGLC  G++++A E+ K                    
Sbjct: 444 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-------------------- 483

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
               A  K  + L       G+ PD+  Y  LI+    + K  E+E+ ++E    G+ P 
Sbjct: 484 ----AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY+SMI G  +   +  A + F  M     +PD +T+  L+SG CK  ++D+  + + 
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            M  +GI    +T +TL + + K G+   A+ I + +
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 222/496 (44%), Gaps = 29/496 (5%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S+  +M    +P    + N ++   C    + +A   F ++   G   D  ++  ++  
Sbjct: 97  ISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHG 156

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            C   RV+EA      M     +    T T L+   C +G    + +A  LL+ MV  G 
Sbjct: 157 LCVEDRVSEALDLFHQMCRPNVV----TFTTLMNGLCREG---RVVEAVALLDRMVEDGL 209

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +PN  T+  ++DG+CK G T  A  L  K+    + KPNV  Y+A+I G  K+ + + A 
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L   M+E+G+ P+  TY  +I G C  G +  A  L+  M +    PN+  Y+A+I+  
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            K+ +  EA EL  +   R +  + ITY  ++    KQ     A  +F  M   G +PD+
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             + TLI  +C  K++ +  +   E    GL     TY ++I G+   G++++A+   Q+
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG-----------KGISPCEVTRV 581
           M   G  PD +T   L+ GLC   KL +A + +++M              G+ P   T  
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHK 634
            L      +G    A    E L K++  R       T +++I  LC + R+  A   F  
Sbjct: 510 ILISGLINEGKFLEA----EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565

Query: 635 LLGKDQNVDRVSLAAL 650
           +  K  + D V+   L
Sbjct: 566 MGSKSFSPDVVTFNTL 581



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++ +  +  E   +  EM   G+   T T N ++   C+   ++ AE +F  M  +G
Sbjct: 325 LINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG 384

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC   R+ +    L  M + G + D  T   LI  FC     G + 
Sbjct: 385 CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC---LVGDLN 441

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +L ++M+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L + M  +G++PNT TY+S+I G CK    + A  
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +P++  +N ++ G CK GRV +  EL  +  +R + AD ITY  L+    
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           K      AL +F  M+ +G+ PD     +++     ++++K +    ++
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 44/362 (12%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E A  LF  +VRS    P+V  +  ++    + E+ +    L ++M+ + +  +  ++  
Sbjct: 59  EDAIDLFSDMVRSRPL-PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C       A      + K G  P++  ++ ++ GLC + RV EA +L    F + 
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL----FHQM 173

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR-------- 484
            + + +T+T L++   ++    +A+ L  RMV+ GL P+   Y T++   C+        
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 485 --QKKMKE--------------------------SEKFFQEAITAGLFPTKETYTSMICG 516
              +KM+E                          +   + E    G+FP   TY  MI G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           +   G  S A +  Q M +    P+ +TY ALI+   K+ K  EA + Y+ M+ +GI P 
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 577 EVTRVTLAYEYCKQG--DSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
            +T  ++   +CKQ   D+A  M  ++ +      + T NTLI   C  KR+       H
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 634 KL 635
           ++
Sbjct: 414 EM 415



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 8/289 (2%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +N ++  + +  R      L +K  ++++  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++ IL+      ++   AL  F ++ K G  PD+  ++TL+   C + ++ E+   F
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G +  AV    RM + G  P+ ITYG ++ G+CK 
Sbjct: 171 HQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 556 SKLDEACQFYESMIGKG-ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +     K G  + A  +   + +K     + T
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N +I   CS  R   A     ++L +  N + V+ +AL NA  +  K+
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 1/159 (0%)

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L + F   K ++++   F + + +   P+   +  ++   +R       +  +Q+M +  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
              D  ++  LI   C  SKL  A   +  +   G  P  VT  TL +  C +   + A+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            +   + +   + T  TL+  LC E RV  A     +++
Sbjct: 168 DLFHQMCRP-NVVTFTTLMNGLCREGRVVEAVALLDRMV 205


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 234/452 (51%), Gaps = 7/452 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +  A ++  +M +RG+  + ++Y ++V  YC+MG + EA   +  M
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                + D  T  +LI   C++G    I++AF+L +EM      P+V ++  LI+G  + 
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEG---RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +AF+L L+ +     KPN  T+  M+  YCKE KM+ A   + +M+E G  P+  T
Sbjct: 362 SKISEAFKL-LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +LI G+CK GN   A+  MD MG++    +    N I+  LC++ +++EAY+LL  A 
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +R    D+++Y  L+  + K     +AL L+  M +  + P    Y  +I   C+  K +
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++     E + +GL P + TY +++ GY R+G++  A ++  +M +    PD  T   L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW- 608
            GLC +  L++A + + + + KG +   VT  TL    CK+G    A  +L  +++K   
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 609 --IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
               T N +I  L    R+  A  F  K+L K
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 236/476 (49%), Gaps = 8/476 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V ++ E F++    G+  + +++ +++  YC   +  +A  +L+ M       DN T   
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++ A C KG  G    A +LL +M  +G  PN  T+ +L+ G CK GW ++A  + ++L+
Sbjct: 249 ILDALCKKGRLG---DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV-IELM 304

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +N  P+V TY  +I+G C E ++  A  L + M+   LLP+  +Y +LI G  +    
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A+ L++ M ++G  PN   +N ++   CK+G++ +A   + K  +     D +TY  L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++ + K     +A      M +  +  D     T++   CR+KK++E+ K    A   G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F  + +Y ++I GY +DGN+  A+K +  M +    P  +TY  +I GLC+  K ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC 620
               ++  G+ P E T  T+ + YC++GD   A      + +   K  + T N L+R LC
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGIG 675
            E  +  A   F+  + K + +D V+   L  + C E      F+ LS+   + +G
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 236/525 (44%), Gaps = 69/525 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + GRL +   ++++M + GL    +T N +V   C++G ++ A  V + M    
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++   C  GR+ EA +    M +   + D  +   LI    +      I 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE---WSKIS 365

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+LLEEM  KG KPN  TH +++   CK+G  + A     K+  S  + P+  TY  +
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES-GFSPDCVTYNTL 424

Query: 339 ISGYCK-----------------------------------EEKMNRAEMLLERMKEQGL 363
           I+GYCK                                   E+K+  A  LL   +++G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             +  +Y +LI G+ K GN +RA  L D M ++   P+   YN II GLC+ G+ ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            L +  +  L  D+ TY  +L  + ++ + ++A     +MV+    PD+     L+   C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
            +  ++++ K F   ++ G      TY ++I    ++G +  A      M +    PD+ 
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV------------------TLAY 585
           TY A+I+ L    ++ EA +F   M+ KG  P +V ++                  ++AY
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAY 724

Query: 586 -----EYCKQGDSATAMIILE-------SLDKKLWIRTVNTLIRK 618
                E C +G    AM I         ++DK  +I  ++ LI++
Sbjct: 725 SEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 153/353 (43%), Gaps = 62/353 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G + E F  + EM    + + + TLN ++   C    +E A ++      RG
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 219 VCADASSYKLMVVAY-----------------------------------CRMGRVTEAD 243
              D  SY  ++V Y                                   C+ G+  +A 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ +L+ G + D  T   ++  +C +G    +++AF+   +MV   +KP+V+T  +L+
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREG---DVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC +G  EKA +LF   V S     +  TY  +I+  CKE +++ A  LL  M+E+ L
Sbjct: 601 RGLCMEGMLEKALKLFNTWV-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN---------------------- 401
            P+  TY ++I      G    A + M  M ++G  P                       
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDS 719

Query: 402 -IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              AY+  I  LC +G+ ++A  +  ++ Q+ +  DK TY  L+   +K+ ++
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 57/251 (22%)

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP---TKETYTSMICGYLRDGNISSA 526
           P      T I A+ +  +   + + F++     L P   T  T  + +  Y    ++S +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT---- 582
            + F    ++G  P+  T+  +I G C ++K  +A +F   M     SP  VT  T    
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 583 -------------------------------LAYEYCKQGDSATAMIILE-----SLDKK 606
                                          L Y YCK G    A  ++E     +L   
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV----DRVSLAALKNACYESNK--- 659
           +W  T N LI  LC+E R+  A     KL  + +N+    D VS   L N C E +K   
Sbjct: 313 VW--TYNMLINGLCNEGRIEEA----FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 660 -YALFSDLSQR 669
            + L  ++S++
Sbjct: 367 AFKLLEEMSEK 377


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 223/430 (51%), Gaps = 13/430 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S     GR+ +  ++   M   G      T N ++   C++G ++ A ++FD    RG
Sbjct: 16  LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +C+  ++ EA R L  M+    + D  T   L+   C  G    + 
Sbjct: 76  FVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNG---RVD 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK--KGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +A  L+   V KG+ PNV T++ LI GLC+  +G +E A +LF  +++   Y+P V TY 
Sbjct: 133 EARMLI---VDKGFSPNVITYSTLISGLCRELRGVSE-ALKLFGSVLKQ-GYEPEVPTYN 187

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G  KE+++N A  L   + + GL P+  TYT  I G CK G  E A  ++  M ++
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P++ ++NA+I+GLCK+ RV EA  LL     +    + I++  L+    +  + K+A
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQK---KMKESEKFFQEAITAGLFPTKETYTSM 513
           +  F  M+K G+ P +  Y  L+   C+ +   ++KE+   F   I  G  P   TY+++
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  + G +  A +    M   GC P+  TY +LISGLC   K+DEA + + +M+ KG 
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGC 427

Query: 574 SPCEVTRVTL 583
            P  +T  T+
Sbjct: 428 VPDTITYGTI 437



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 221/436 (50%), Gaps = 14/436 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++   C  GR+++A      M+  G   D  T   L+  FC     G + +A ++ 
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV---GELDEALKIF 68

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +  V++G+ P+V T+  LI+G CK    ++A R+  ++V S+N  P+V TY ++++G CK
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV-SENLVPDVVTYNSLVNGLCK 127

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK-VGNFERAYDLMDLMGKEGCTPNIY 403
             +++ A ML+    ++G  PN  TY++LI G C+ +     A  L   + K+G  P + 
Sbjct: 128 NGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN +IDGL K+ RV EA+EL     +  L+ D ITYT+ +    K    + AL +   M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            + G  PD+ ++  +I   C++K++ E+E         G  P   ++ ++ICG  R G  
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCK---QSKLDEACQFYESMIGKGISPCEVTR 580
             A+  F+ M + G  P  +TY  L+ GLCK   + ++ EA   +++MI KG  P  VT 
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLG 637
             L     K G    A  +L +++ K  I  V   N+LI  LC  ++V  A   F  ++ 
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVE 424

Query: 638 KDQNVDRVSLAALKNA 653
           K    D ++   + +A
Sbjct: 425 KGCVPDTITYGTIISA 440



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 197/380 (51%), Gaps = 11/380 (2%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M + G+ PN  T+  L+ GLC  G    A  L+ +++++  Y P+V TY  ++ G+CK  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA-GYSPDVVTYNTLLHGFCKVG 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  + +   ++G +P+  TY +LI G CK    + A  ++  M  E   P++  YN
Sbjct: 60  ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE-TKQALGLFCRMVK 465
           ++++GLCK GRV EA  L+     +    + ITY+ L+S   ++     +AL LF  ++K
Sbjct: 120 SLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P++  Y  LI    ++ ++ E+ + F   +  GL P   TYT  I G  + G +  
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+   + M++ GC PD +++ A+I+GLCK+ ++DEA      M  KG SP  ++  TL  
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC---SEKRVGMAALFFHKLLGKD 639
             C+ G    AM   + + K   K  + T N L+  LC    E R+  A   F  ++ K 
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 640 QNVDRVSLAALKNACYESNK 659
           +  D V+ +AL +   ++ K
Sbjct: 357 RVPDVVTYSALIDGLGKAGK 376



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 11/403 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G +  A+ +++ M   G   D  +Y  ++  +C++G + EA +     
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + RG + D  T   LI  FC       + +A  +L+ MV +   P+V T+  L++GLCK 
Sbjct: 72  VKRGFVPDVVTYNALINGFCKAD---KLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK-MNRAEMLLERMKEQGLLPNTN 368
           G  ++A  L +       + PNV TY+ +ISG C+E + ++ A  L   + +QG  P   
Sbjct: 129 GRVDEARMLIV----DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY  LI G  K      A++L   + K G  P+   Y   IDGLCK GRV++A  +LK  
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++    D +++  +++   K+    +A  L   M   G +P+  ++ TLI   CR  K 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 489 KESEKFFQEAITAGLFPTKETYTSMI---CGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           K++   F+E +  G+ PT  TY  ++   C   ++G I  A+  F  M + G  PD +TY
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            ALI GL K  KLD+A +   +M  KG  P   T  +L    C
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 125/245 (51%), Gaps = 7/245 (2%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  A E+F  +   G+  DA +Y + +   C+ GRV +A   L  M ++G + D  +   
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I   C +     + +A  LL  M  KG  PN  +   LI G C+ G  +KA   F +++
Sbjct: 259 VINGLCKEK---RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315

Query: 324 RSDNYKPNVHTYTAMISGYCK---EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +    KP V TY  ++ G CK   E ++  A  L + M E+G +P+  TY++LI G  K 
Sbjct: 316 KR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A  L+  M  +GC PN+Y YN++I GLC   +V EA EL     ++    D ITY
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 441 TILLS 445
             ++S
Sbjct: 435 GTIIS 439


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 255/533 (47%), Gaps = 28/533 (5%)

Query: 142 SLISNGNFERAHEVMQ-------CMVSSF-------AEIGRLKEGFSMVIEMTNNGLPLI 187
           SL+ +G  E+AH  ++       C +S+F           R+ +  ++   M  +G    
Sbjct: 25  SLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPN 84

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C  G +  A+ +++ M   G   D  +Y  ++  +C++G++ EA +   
Sbjct: 85  RITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFD 144

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             + RG + D  T   LI  FC       + +A  +L+ MV +   P+V T+  L++GLC
Sbjct: 145 GAVKRGFVPDVVTYNALINGFCKA---DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLC 201

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE-EKMNRAEMLLERMKEQGLLPN 366
           K G  ++A  L +       + PNV TY+ +ISG C+E  ++  A  LLE+M   G  P+
Sbjct: 202 KNGRVDEARMLIV----DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             +Y +LI+G  +      A  L   + ++G  P +  YN +IDGL K+ RV EA+EL  
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              +  L+ D ITYT+ +    K    + AL +   M + G  PD+ ++  +I   C++K
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ E+E         G  P   ++ ++ICG  R G    A+  F+ M + G  P  +TY 
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 437

Query: 547 ALISGLCK---QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            L+ GLCK   + ++ EA   +++MI KG  P  VT   L     K G    A  +L ++
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497

Query: 604 DKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + K  I  V   N+LI  LC   +V  A   F  ++ K    D ++   + +A
Sbjct: 498 EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISA 550



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 225/485 (46%), Gaps = 69/485 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S     GR+ +  ++   M   G      T N ++   C++G ++ A ++FD    RG
Sbjct: 91  LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG 150

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
              D  +Y  ++  +C+  ++ EA R L  M+    + D  T   L+   C         
Sbjct: 151 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210

Query: 270 ----DKGFRGSI-----------------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
               DKGF  ++                 + A +LLE+MV  G KP++ ++  LI GL +
Sbjct: 211 MLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAR 270

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +    +A +LF  ++R   Y+P V TY  +I G  KE+++N A  L   + + GL P+  
Sbjct: 271 EQGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL--- 425
           TYT  I G CK G  E A  ++  M ++GC P++ ++NA+I+GLCK+ RV EA  LL   
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 426 --------------------------------KKAFQRELQADKITYTIL---LSEHLKQ 450
                                           K+  +R ++   +TY IL   L +  ++
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              K+A+ LF  M++ G  PD+  Y+ LI    +  K+ ++ +        G  P   TY
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S+I G      +  A++ F  M + GC PD ITYG +IS LCKQ  +D+A   ++  + 
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569

Query: 571 KGISP 575
            G+ P
Sbjct: 570 AGVVP 574



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 198/403 (49%), Gaps = 41/403 (10%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--------------------- 323
           +++VR  + P+ YT  +L+  L K G  EKA R   +L+                     
Sbjct: 6   DKLVRI-YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRAS 64

Query: 324 ------------RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                       R   + PN  TY A++SG C   +M+ A+ L ERM + G  P+  TY 
Sbjct: 65  RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +L++G CKVG  + A  + D   K G  P++  YNA+I+G CK  ++ EA  +L++    
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE 184

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ-KKMKE 490
            L  D +TY  L++   K     +A  L   +V  G +P++  Y+TLI+  CR+ ++++ 
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLES 241

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +  ++ +  G  P   +Y ++I G  R+  +S A+K F  + + G  P+  TY  LI 
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           GL K+ +++EA + +  ++  G+ P  +T        CK G    A+++L+ +D+K  + 
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361

Query: 611 TV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            V   N +I  LC EKRV  A +    +  K  + + +S   L
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 199/411 (48%), Gaps = 44/411 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + GR+ E   ++++   +   +  STL  + G+  EL  +E A ++ ++M   G
Sbjct: 196 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTL--ISGLCRELRRLESARQLLEKMVLNG 253

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++    R   V+EA +   ++L +G   +  T  +LI     +     + 
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED---RVN 310

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFEL   +V+ G +P+  T+TV IDGLCK G  E A  L LK +      P+V ++ A+
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL-LMLKDMDEKGCVPDVVSHNAV 369

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CKE++++ AE+LL  M+ +G  PN  ++ +LI G C+ G +++A      M K G 
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 399 TPNIYAYNAIIDGLCK---KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE--- 452
            P +  YN ++DGLCK   +GR++EA  L     ++    D +TY+ L+    K  +   
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 453 --------------------------------TKQALGLFCRMVKAGLNPDIHAYTTLIA 480
                                             +AL LF  MV+ G  PD   Y T+I+
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           A C+Q+ + ++   F  ++ AG+ PT   Y S+I G      +  A+K  Q
Sbjct: 550 ALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 265/620 (42%), Gaps = 61/620 (9%)

Query: 55  PSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSM 114
           P PP  L               F    S P+         L    + + V+SL N    +
Sbjct: 49  PDPPDDLSS-----------HHFLSILSHPKWQRHPSFQKLIPNLSPSHVSSLFNNHPDL 97

Query: 115 ---VALSFFYWAIGFAK--FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRL 169
              +AL FF  ++   K  F+H ++ +      LI N  F    ++   M+ +   +  +
Sbjct: 98  NPNIALQFFN-SLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDI 156

Query: 170 KEGFSMVIEMTNNG----LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +     + +M  +       L   + N ++ +     +++  + V+ EM    +  +  +
Sbjct: 157 RFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYT 216

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
              MV AY +MG + EA+ ++S +   G   D+ T T LI  +C       +  A+++  
Sbjct: 217 LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN---DVNSAYKVFN 273

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY----------------- 328
            M  KG + N  ++T +I GLC+ G  ++   LF K+   D Y                 
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333

Query: 329 -----------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                            +PNVHTYT M+   CKE K++ +  +L  M E+GL+P+  TY 
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G+C+ G  E A +++ LM    C PN   YN +I G  K+  V +A  LL K  + 
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           +L    +TY  L+    K      A  L   + + GL PD   Y+  I   C+ K+M+E+
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F      G+   +  YT++I G+ + G I  A+   +RM+   C P++ TY +LI G
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLW 608
           +CK+ K+ E     E+M   G+ P   T   L  E  ++GD   A  +     S   K  
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPD 633

Query: 609 IRTVNTLIRKLCSEKRVGMA 628
           + T    I   C+   V  A
Sbjct: 634 VYTYTAFIHTYCTSGNVKEA 653



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 230/483 (47%), Gaps = 39/483 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  MV++++++G + E    V ++   GL   + T   ++   C    V  A +VF+ M 
Sbjct: 217 LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMP 276

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEA-----------------------------DRWL 246
            +G   +  SY  ++   C  GR+ E                              DR L
Sbjct: 277 NKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNL 336

Query: 247 SAM------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
             M       +R    +  T T+++ A C +     + ++  +L EM+ KG  P+V T+ 
Sbjct: 337 EGMDLFNEMRERSCEPNVHTYTVMVDAMCKER---KLDESRRILNEMMEKGLVPSVVTYN 393

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI G C++G  E A  + L L+ S+N +PN  TY  +I G+ K + +++A  LL +M E
Sbjct: 394 ALIRGYCEEGRIEAALEI-LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L P+  TY SLI+  CK G+F+ AY L+DL+ + G  P+ + Y+  ID LCK  R++E
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEE 512

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L     ++ ++A+++ YT L+  H K  +  +A+ L  RM      P+   Y +LI 
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C++ K++E     +     G+ PT  TYT +I   LR+G+   A + F +M   G  P
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D  TY A I   C    + EA      MI  G+ P  +T   L   Y + G +  A  +L
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692

Query: 601 ESL 603
           + +
Sbjct: 693 KRM 695



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 204/440 (46%), Gaps = 33/440 (7%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           +++ N    R       ++    E GR+ EG S+  +M  +       T   ++      
Sbjct: 273 NMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGN 332

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
                  ++F+EM  R    +  +Y +MV A C+  ++ E+ R L+ M+++G +    T 
Sbjct: 333 DRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 262 TLLITAFCDKGF--------------------------------RGSIKQAFELLEEMVR 289
             LI  +C++G                                 R  + +A  LL +M+ 
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
               P++ T+  LI   CK G  + A++L L L++ +   P+  TY+  I   CK ++M 
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKL-LDLLKENGLVPDQWTYSVFIDTLCKSKRME 511

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  L   +KE+G+  N   YT+LI GHCK G  + A  L++ M  E C PN   YN++I
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G+CK+G+VQE   +++   +  ++    TYTIL+ E L++ +   A  +F +MV  G  
Sbjct: 572 YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD++ YT  I  +C    +KE+E      I AG+ P   TYT +I  Y R G    A   
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNV 691

Query: 530 FQRMNQIGCAPDNITYGALI 549
            +RM   GC P +  +  LI
Sbjct: 692 LKRMLDAGCDPSHPIWNNLI 711



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 39/244 (15%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G     + ++  +  NGL     T +  +   C+   +E A ++F+ +  +G+ A+   Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +C+ G++ EA   L  M     + +++T   LI   C +G    +++   ++E 
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG---KVQEGLSMVEN 589

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA--------- 337
           M + G KP V T+T+LI+ + ++G  + A R+F ++V S  +KP+V+TYTA         
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV-SFGHKPDVYTYTAFIHTYCTSG 648

Query: 338 --------------------------MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                                     +IS Y +      A  +L+RM + G  P+   + 
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708

Query: 372 SLIY 375
           +LI+
Sbjct: 709 NLIW 712


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 201/377 (53%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G +E + ++  E+   G   +   Y  ++   C+ G + +A      M   G + + 
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI      G +   KQ FE+ E+M   G  PN+YT+  +++ LCK G T+ AF++
Sbjct: 234 RTYTVLINGLFKNGVK---KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R      N+ TY  +I G C+E K+N A  ++++MK  G+ PN  TY +LI G C
Sbjct: 291 FDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG   +A  L   +   G +P++  YN ++ G C+KG    A +++K+  +R ++  K+
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL+    +    ++A+ L   M + GL PD+H Y+ LI  FC + +M E+ + F+  
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +     P +  Y +MI GY ++G+   A+K  + M +   AP+  +Y  +I  LCK+ K 
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529

Query: 559 DEACQFYESMIGKGISP 575
            EA +  E MI  GI P
Sbjct: 530 KEAERLVEKMIDSGIDP 546



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 237/458 (51%), Gaps = 17/458 (3%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA--ILDNATLTLLITAF 268
           F+EM   G    ++ +  ++         +  ++W S   +  +  +LD  +  +LI   
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGS---SSFNQWWSFFNENKSKVVLDVYSFGILIKGC 173

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C+ G    I+++F+LL E+   G+ PNV  +T LIDG CKKG  EKA  LF ++ +    
Sbjct: 174 CEAG---EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL-GL 229

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             N  TYT +I+G  K     +   + E+M+E G+ PN  TY  ++   CK G  + A+ 
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D M + G + NI  YN +I GLC++ ++ EA +++ +     +  + ITY  L+    
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349

Query: 449 KQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
              +  +AL L CR +K+ GL+P +  Y  L++ FCR+     + K  +E    G+ P+K
Sbjct: 350 GVGKLGKALSL-CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TYT +I  + R  N+  A++    M ++G  PD  TY  LI G C + +++EA + ++S
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKR 624
           M+ K   P EV   T+   YCK+G S  A+ +L+ +++K     V +   +I  LC E++
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 625 VGMAALFFHKLL--GKDQNVDRVSLAA-LKNACYESNK 659
              A     K++  G D +   +SL +  KN  + S+K
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSSK 566



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 192/396 (48%), Gaps = 40/396 (10%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           E G +++ F ++IE+T  G          ++   C+ G +E A+++F EM   G+ A+  
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234

Query: 225 SYKLMVVAY-----------------------------------CRMGRVTEADRWLSAM 249
           +Y +++                                      C+ GR  +A +    M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +RG   +  T   LI   C +     + +A +++++M   G  PN+ T+  LIDG C  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCRE---MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   KA  L   L +S    P++ TY  ++SG+C++   + A  +++ M+E+G+ P+  T
Sbjct: 352 GKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT LI    +  N E+A  L   M + G  P+++ Y+ +I G C KG++ EA  L K   
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++  + +++ Y  ++  + K+  + +AL L   M +  L P++ +Y  +I   C+++K K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           E+E+  ++ I +G+ P+  +  S+I     D ++SS
Sbjct: 531 EAERLVEKMIDSGIDPST-SILSLISRAKNDSHVSS 565



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 156/310 (50%), Gaps = 21/310 (6%)

Query: 134 RLYIVCATSLISNG----NFERAHEVMQ------------CMVSSFAEIGRLKEGFSMVI 177
           R Y V    L  NG     FE  +E MQ            C+++   + GR K+ F +  
Sbjct: 234 RTYTVLINGLFKNGVKKQGFE-MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N ++G  C    +  A +V D+M + G+  +  +Y  ++  +C +G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++ +A      +  RG      T  +L++ FC K   G    A ++++EM  +G KP+  
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK---GDTSGAAKMVKEMEERGIKPSKV 409

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T+LID   +    EKA +L L +       P+VHTY+ +I G+C + +MN A  L + 
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E+   PN   Y ++I G+CK G+  RA  L+  M ++   PN+ +Y  +I+ LCK+ +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 418 VQEAYELLKK 427
            +EA  L++K
Sbjct: 529 SKEAERLVEK 538


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 220/426 (51%), Gaps = 8/426 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L     ++ EM + G      T   ++      G ++ A    D + + G   +  +Y
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTY 60

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ A+ R  ++ EA + L  M +RG   +  T  +L+ A C     G+   A +++++
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA---AQDVVKK 117

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G+ PNV T   L+DG CK+G  + A R  L ++ +   +PNV TY+A+I G CK +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDA-RKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   A+ +LE MK  G+ P+  TY++LI+G CK    E A  ++  M   GCTP++  Y+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +II   CK G++ EA + L++  ++    D +TY  ++    K  +  +A  +  +M ++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296

Query: 467 G-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           G + PD+  Y+T+I   C+   + E++K       AG  P   TYT++I G  + G +  
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A    Q M + GCAP+ +TY  LISGLCK  K+DEA +  E M   G  P  VT  T+  
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416

Query: 586 EYCKQG 591
             C  G
Sbjct: 417 GLCVSG 422



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 199/366 (54%), Gaps = 5/366 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A ++ +EM  RG   +  +Y ++V A C++  V  A   +  M++ G   +  T   
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  FC    RG++  A +LL  MV KG +PNV T++ LIDGLCK     +A +  L+ +
Sbjct: 133 LVDGFCK---RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA-KEVLEEM 188

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           ++    P+  TY+A+I G CK +K+  AE +L RM   G  P+   Y+S+I+  CK G  
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTI 442
             A   +  M K+  +P++  YN +IDGLCK G++ EA  +L +  +  ++  D +TY+ 
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++   K     +A  L  RM KAG NPD+  YTT+I   C+  +++E+E   Q    AG
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   TYT++I G  +   +  A +  + M   GC P+ +TY  +++GLC   ++ EA 
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428

Query: 563 QFYESM 568
           Q  + M
Sbjct: 429 QLVQRM 434



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 214/413 (51%), Gaps = 7/413 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++FA   +L+E   ++ EM   G P    T N +V   C+L +V  A++V  +M   G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  +V  +C+ G V +A + L  M+ +G   +  T + LI   C         
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS---QKFL 179

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+LEEM   G  P+ +T++ LI GLCK    E+A ++  ++  S    P+V  Y+++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 238

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I  +CK  K+  A+  L+ M++Q   P+  TY ++I G CK+G    A  ++D M + G 
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  Y+ +I+GLCK   + EA +LL +  +     D +TYT ++    K    ++A 
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +AG  P++  YTTLI+  C+ +K+ E+E+  +E   AG  P   TY +M+ G 
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418

Query: 518 LRDGNISSAVKYFQRM--NQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
              G I  A +  QRM   +  C+PD  TY  +++ L     + EA Q  E M
Sbjct: 419 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 213/444 (47%), Gaps = 11/444 (2%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C  G +  A   L  M   G   D  T T +ITA  + G    +  A + L  M   G  
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSM---GCD 54

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           PNV T+T LI    +    E+A +L L+ +R     PN+ TY  ++   CK   +  A+ 
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKL-LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 113

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           ++++M E G  PN  T+ SL+ G CK GN + A  L+ +M  +G  PN+  Y+A+IDGLC
Sbjct: 114 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K  +  EA E+L++     +  D  TY+ L+    K  + ++A  +  RM  +G  PD+ 
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+++I AFC+  K+ E++K  QE       P   TY ++I G  + G I+ A     +M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293

Query: 534 NQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
            + G   PD +TY  +I+GLCK   L EA +  + M   G +P  VT  T+    CK G 
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 593 SATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A  +L+ + +      + T  TLI  LC  ++V  A     ++       + V+   
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 650 LKNACYESNKYALFSDLSQRIAEG 673
           + N    S +      L QR+ +G
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDG 437



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 177/353 (50%), Gaps = 5/353 (1%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F         +V  F + G + +   ++  M   G+     T + ++   C+      
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV +EM A GV  DA +Y  ++   C+  ++ EA++ L  M   G   D    + +I 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           AFC  G    + +A + L+EM ++   P+V T+  +IDGLCK G   +A  +  ++  S 
Sbjct: 241 AFCKSG---KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +  P+V TY+ +I+G CK + +  A+ LL+RM + G  P+  TYT++I G CK G  E A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+  M + GC PN+  Y  +I GLCK  +V EA  ++++        + +TY  +++ 
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 447 HLKQAETKQALGLFCRMV--KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
                  K+A  L  RM   +A  +PD   Y T++ A      ++E+E+  ++
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 255/528 (48%), Gaps = 8/528 (1%)

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQC 158
           +A+ V  SL  +  +   +++    +GF + + F    I     ++  G F      +  
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQF-EAGIQLMDEMVELG-FSPTEAAVSG 335

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G++ + + +V+++   G        N ++   C+ G ++ AE ++  M    
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ ++CR GR+  A  +   M+  G          LI   C     G + 
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK---FGDLS 452

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L  EM  KG +P   T T LI G CK    +KAF+L+ K++  +   PNV+T+TA+
Sbjct: 453 AAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI-DNGITPNVYTFTAL 511

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C   KM  A  L + + E+ + P   TY  LI G+C+ G  ++A++L++ M ++G 
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y  +I GLC  GRV +A + +    ++ ++ +++ Y+ LL  + ++    +AL 
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
             C M++ G+N D+  +  LI    +Q   K      ++    GL P    YTSMI  Y 
Sbjct: 632 ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYS 691

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G+   A + +  M    C P+ +TY AL++GLCK  ++D A   ++ M    + P  +
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKR 624
           T         K+G+   A+ +  ++ K L   TV  N +IR  C   R
Sbjct: 752 TYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGR 799



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 228/484 (47%), Gaps = 69/484 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ SF   GRL    S    M  +G+       N ++   C+ G +  AE +F EM  +G
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-------- 270
           V   A+++  ++  YC+  +V +A +  + M+D G   +  T T LI+  C         
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 271 ----------------------KGF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                 +G+   G I +AFELLE+M +KG  P+ YT+  LI GL
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-----EM-------- 353
           C  G   KA + F+  +   N K N   Y+A++ GYC+E ++  A     EM        
Sbjct: 586 CSTGRVSKA-KDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 354 ----------------------LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
                                 LL+ M +QGL P+   YTS+I  + K G+F++A++  D
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           LM  E C PN+  Y A+++GLCK G +  A  L K+     +  + ITY   L    K+ 
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             K+A+GL   M+K GL  +   +  +I  FC+  +  E+ K   E    G+FP   TY+
Sbjct: 765 NMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I  Y R GN+ ++VK +  M   G  PD + Y  LI G C   +LD+A +  + M+ +
Sbjct: 824 TLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883

Query: 572 GISP 575
           GI P
Sbjct: 884 GIIP 887



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 221/437 (50%), Gaps = 6/437 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++   ++ +    + +  E  N G+     T + VV   CEL     A+E    M 
Sbjct: 193 LSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWME 252

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-KGFR 274
           A G      +Y +++   C+  RV+EA     ++  +G   D  T   L+  FC  + F 
Sbjct: 253 ANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFE 312

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I    +L++EMV  G+ P     + L+DGL K+G  + A+ L +K+ R   + PN+  
Sbjct: 313 AGI----QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF-GFVPNLFV 367

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+I+  CK   +++AE+L   M    L PN  TY+ LI   C+ G  + A    D M 
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G    +YAYN++I+G CK G +  A  L  +   + ++    T+T L+S + K  + +
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L+ +M+  G+ P+++ +T LI+  C   KM E+ + F E +   + PT+ TY  +I
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY RDG I  A +  + M+Q G  PD  TY  LISGLC   ++ +A  F + +  + + 
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607

Query: 575 PCEVTRVTLAYEYCKQG 591
             E+    L + YC++G
Sbjct: 608 LNEMCYSALLHGYCQEG 624



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 227/493 (46%), Gaps = 46/493 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++S  + G L +   +   M+   L     T + ++   C  G ++ A   FD M
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +Y  ++   C+ G ++ A+     M ++G      T T LI+ +C     
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL-- 484

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +++AF+L  +M+  G  PNVYT T LI GLC      +A  LF +LV     KP   T
Sbjct: 485 -QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER-KIKPTEVT 542

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GYC++ K+++A  LLE M ++GL+P+T TY  LI G C  G   +A D +D + 
Sbjct: 543 YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+    N   Y+A++ G C++GR+ EA     +  QR +  D + + +L+   LKQ + K
Sbjct: 603 KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
               L   M   GL PD   YT++I  + ++   K++ + +   +T   FP   TYT+++
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA--------------------------- 547
            G  + G +  A   F+RM      P++ITYG                            
Sbjct: 723 NGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA 782

Query: 548 -------LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
                  +I G CK  +  EA +    M   GI P  VT  TL YEYC+ G+   ++   
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV--- 839

Query: 601 ESLDKKLWIRTVN 613
                KLW   +N
Sbjct: 840 -----KLWDTMLN 847



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 197/400 (49%), Gaps = 5/400 (1%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E +  M   G+  ++ T+ VLI GLCK     +A  +   L        +V TY  +
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSL-GGKGLAADVVTYCTL 301

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+C+ ++      L++ M E G  P     + L+ G  K G  + AY+L+  +G+ G 
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN++ YNA+I+ LCK G + +A  L        L+ + ITY+IL+    +      A+ 
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F RM++ G+   ++AY +LI   C+   +  +E  F E    G+ PT  T+TS+I GY 
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +D  +  A K + +M   G  P+  T+ ALISGLC  +K+ EA + ++ ++ + I P EV
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L   YC+ G    A  +LE + +K  +    T   LI  LCS  RV  A  F   L
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 636 LGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             ++  ++ +  +AL +  C E       S   + I  GI
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 38/347 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +   G++ + F ++ +M   GL   T T   ++   C  G V  A++  D++  + 
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y  ++  YC+ GR+ EA      M+ RG  +D     +LI     +  R   K
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR---K 662

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F+LL++M  +G +P+   +T +ID   K+G  +KAF  +  +V  + + PNV TYTA+
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF-PNVVTYTAL 721

Query: 339 ISGYCKEEKMNRAEMLLERMKE----------------------------------QGLL 364
           ++G CK  +M+RA +L +RM+                                   +GLL
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLL 781

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            NT T+  +I G CK+G F  A  ++  M + G  P+   Y+ +I   C+ G V  + +L
Sbjct: 782 ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKL 841

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
                 R L+ D + Y +L+       E  +A  L   M++ G+ PD
Sbjct: 842 WDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 167/358 (46%), Gaps = 3/358 (0%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           + +KL+ ++N  P V T +A+++G  K  K      L +     G+ P+  T ++++   
Sbjct: 176 VIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSM 235

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C++ +F RA + +  M   G   +I  YN +I GLCK  RV EA E+ +    + L AD 
Sbjct: 236 CELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADV 295

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY  L+    +  + +  + L   MV+ G +P   A + L+    +Q K+ ++ +   +
Sbjct: 296 VTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVK 355

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G  P    Y ++I    + G++  A   +  M+ +   P+ ITY  LI   C+  +
Sbjct: 356 VGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL--WIRTVNT 614
           LD A  +++ MI  GI        +L    CK GD SA   + +E  +K +     T  +
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           LI   C + +V  A   ++K++      +  +  AL +    +NK A  S+L   + E
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F ++GR  E   ++ EMT NG+     T + ++   C  G V  + +++D M  RG
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           +  D  +Y L++   C  G + +A      ML RG I DN  L
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYL 892


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 250/491 (50%), Gaps = 30/491 (6%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  M   G+  DA SY +++   C  G + EA    + M
Sbjct: 283 SFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDM 342

Query: 250 LDRGAILDNATLTLLITAFCDKGFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            + G   D  T  +L      KGFR  G I  A+ ++++M+ KG  PN+ T+TVLI G C
Sbjct: 343 ENHGLEPDMVTYNILA-----KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHC 397

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  E+A +L+ +++ S  ++ ++ + T ++   CK  +++ A  L   M+  GL P+ 
Sbjct: 398 QIGNVEEALKLYKEMI-SHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDL 456

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY++LI+G CK G  ++A  L + M      PN   + AI+ GLC+KG++ +A      
Sbjct: 457 ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDY 516

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                L  D I Y I++  ++K+  T++A+ L+ ++ + G++P I  + +L+  FC  +K
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + ++ +        GL P   TYT+++  Y  +GN+ S ++    M      P +ITY  
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILES 602
           +I GLCKQ KL E+CQ  E M   G++P +V+  T+   +CK  D   A      ++L +
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 603 LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYAL 662
           L+      T N LI   C              + G  ++ D + L +L+N     NKYA 
Sbjct: 697 LEPT--SVTYNILINGFC--------------VYGDLKDADNL-LVSLQNRKVNLNKYAY 739

Query: 663 FSDLSQRIAEG 673
            + +    A+G
Sbjct: 740 TTIIKAHCAKG 750



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 222/453 (49%), Gaps = 8/453 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++    +IG ++E   +  EM ++G  L +I+ST+  ++G  C+   V+ A ++F EM A
Sbjct: 392 LICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV--LLGSLCKSRQVDVAFKLFCEMEA 449

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  D  +Y  ++   C+ G V +A      M     I ++     ++   C+KG    
Sbjct: 450 NGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKG---K 506

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I QA    + ++      ++  + ++IDG  K+G T +A +L+ K +      P + T+ 
Sbjct: 507 ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLY-KQLGEKGISPTIVTFN 565

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +++ G+C   K+++A  LL+ +K  GL PN  TYT+L+  +C+ GN +   +L+  M  +
Sbjct: 566 SLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAK 625

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P    Y  +I GLCK+ ++QE+ +LL+      L  D+++Y  ++    K  + ++A
Sbjct: 626 AIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKA 685

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L+ +M+   L P    Y  LI  FC    +K+++          +   K  YT++I  
Sbjct: 686 FQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA 745

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           +   G++  AV YF++M + G       Y A+I  LCK+  + EA  F+  M+  G+ P 
Sbjct: 746 HCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPD 805

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +     L   + + G   +   +L  + K  W+
Sbjct: 806 QDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 223/456 (48%), Gaps = 15/456 (3%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           + ++  AY R   V +A   L  M D   I+   T   L+        R S    +++  
Sbjct: 182 WDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLY-----NLRHS-NIMWDVYN 235

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+   G   + YT ++++DGLC++   + A  LF +      ++P+V ++  ++S YCK 
Sbjct: 236 EIKVSGTPQSEYTSSIVVDGLCRQSRFQDAV-LFFQDTEGKEFQPSVVSFNTIMSRYCKL 294

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             ++ A+     M + GLLP+  +Y  LI+G C  G+   A DL + M   G  P++  Y
Sbjct: 295 GFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY 354

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +  G    G +  A+ +++K   +    + +TYT+L+  H +    ++AL L+  M+ 
Sbjct: 355 NILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G    I + T L+ + C+ +++  + K F E    GL P   TY+++I G  + G +  
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+  +++M      P+++ +GA++ GLC++ K+ +A  +++ +I   +S   +    +  
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 586 EYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH--KLLGKDQ 640
            Y K+G++  A+ + + L +K     I T N+L+   C  +++  A       KL G + 
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594

Query: 641 NVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGIG 675
           N   V+   L N  C E N  +L   LS+  A+ IG
Sbjct: 595 NA--VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 100/213 (46%), Gaps = 4/213 (1%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++    +  +L+E   ++ +M   GL     + N ++   C+   +  A +++
Sbjct: 630 THITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLY 689

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D+M    +   + +Y +++  +C  G + +AD  L ++ +R   L+    T +I A C K
Sbjct: 690 DKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAK 749

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G + +A     +MV KG++ ++  ++ +I  LCK+    +A + F  ++ SD   P+
Sbjct: 750 ---GDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEA-KYFFCMMLSDGVCPD 805

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
              +  +++ + +   +N    LL  M + G L
Sbjct: 806 QDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 7/147 (4%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E        +++ F   G LK+  ++++ + N  + L       ++   C  G V+ A
Sbjct: 696 NLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKA 755

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
              F +M  +G       Y  ++   C+   VTEA  +   ML  G   D     +L+ A
Sbjct: 756 VVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815

Query: 268 F--CDKGFRGSIKQAFELLEEMVRKGW 292
           F  C     G +   FELL EM++ GW
Sbjct: 816 FHQC-----GHLNSEFELLAEMIKSGW 837


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 211/389 (54%), Gaps = 5/389 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F EM   G   +  +Y  M+  YC++ R  EA  +L +M  +G   +  T  ++I   C 
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G    +K+  E+L EM RKG+ P+  T+  L++G CK+G   +A  L  ++VR +   P
Sbjct: 66  DG---RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR-NGLSP 121

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV TYT++I+  CK   +NRA    ++M  +GL PN  TYT++I G  + G  + AY ++
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M + G  P+I  YNA+I+G C  GR++EA  LL+    + +  D ++Y+ ++S   + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E  +A  +   M+   + PD   Y++LI   C Q+++ E+   FQE +T  L P + TY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T++I  Y ++G+++ A+     M Q G  PD +TY  LI+GL KQ++  EA +    +  
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 571 KGISPCEVTRVTLAYEYCK-QGDSATAMI 598
               P  VT  TL    C  +  SA A++
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALV 390



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 191/378 (50%), Gaps = 4/378 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
                +EM R G  PNV T+  +IDG CK   T++AF  FL+ +     +PN+ T+  +I
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFG-FLRSMGLKGLEPNLITFNMII 60

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C++ ++     +L  M  +G +P+  TY +L+ G+CK GNF +A  L   M + G +
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  Y ++I+ +CK G +  A E   +   R L  ++ TYT +++   +Q    +A  +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M ++G  P I  Y  LI   C   +M+E+    Q+ +  G+ P   +Y+++I G+ R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +  +  A +    M      PD +TY +LI GLC+Q +L EAC  ++ M+   + P E T
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
             TL   YCK+GD   A+ + + + +K ++    T N LI  L  + R   A     KL 
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360

Query: 637 GKDQNVDRVSLAALKNAC 654
             D     V+   L   C
Sbjct: 361 YDDSIPSAVTYNTLIENC 378



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 208/442 (47%), Gaps = 23/442 (5%)

Query: 172 GFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           G     EM  NG LP +  T N ++   C+L   + A      M  +G+  +  ++ +++
Sbjct: 2   GLRFFKEMERNGCLPNVV-TYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              CR GR+ E    L  M  +G + D  T   L+  +C +   G+  QA  L  EMVR 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKE---GNFHQALVLHAEMVRN 117

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYCKEEKMN 349
           G  PNV T+T LI+ +CK G   +A   F ++ VR     PN  TYT +I+G+ ++  ++
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG--LCPNERTYTTIINGFAQQGLLD 175

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  +L  M   G +P+  TY +LI GHC +G  E A  L+  M  +G  P++ +Y+ II
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G  +   +  A+++  +   + +  D +TY+ L+    +Q    +A  +F  M+   L 
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP 295

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD   YTTLI A+C++  + ++     E I  G  P   TY  +I G  +      A + 
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355

Query: 530 FQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEACQFYESMIGKGIS 574
             ++      P  +TY                AL+ G C +  +DEA Q +ESMI K   
Sbjct: 356 LLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415

Query: 575 PCEVTRVTLAYEYCKQGDSATA 596
           P E     + + +C+ G+   A
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKA 437



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 205/426 (48%), Gaps = 28/426 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ + + G   +   +  EM  NGL     T   ++   C+ G +  A E FD+M  RG
Sbjct: 94  LVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +C +  +Y  ++  + + G + EA R L+ M   G I    T   LI   C     G ++
Sbjct: 154 LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHC---VLGRME 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL++MV KG  P+V +++ +I G  +    ++AF++ ++++   +  P+  TY+++
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI-GKSVLPDAVTYSSL 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C++ ++  A  + + M    L P+  TYT+LI  +CK G+  +A  L D M ++G 
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +I+GL K+ R +EA  LL K F  +     +TY  L+ E+    E K A+ 
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI-ENCCNIEFKSAVA 388

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                              L+  FC +  M E+++ F+  I     P +  Y  +I G+ 
Sbjct: 389 -------------------LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHC 429

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R GN+  A K ++ M  +   P  +T  AL+  L  +    E       +IG  +  C++
Sbjct: 430 RIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGE----LNEVIGDILRSCKL 485

Query: 579 TRVTLA 584
           T   L+
Sbjct: 486 TDAELS 491



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 174/420 (41%), Gaps = 73/420 (17%)

Query: 130 RHFMRLYIVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRLK 170
           R+ +   +V  TSLI++    GN  RA E    M               ++ FA+ G L 
Sbjct: 116 RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E + ++ EMT +G      T N ++   C LG +E A  +  +M  +GV  D  SY  ++
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235

Query: 231 VAY-----------------------------------CRMGRVTEADRWLSAMLDRGAI 255
             +                                   C   R+TEA      ML     
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP 295

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D  T T LI A+C +G    + +A  L +EM++KG+ P+  T+ VLI+GL K+  +++A
Sbjct: 296 PDEFTYTTLINAYCKEG---DLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352

Query: 316 FRLFLKLVRSDNYKPNVHTYT---------------AMISGYCKEEKMNRAEMLLERMKE 360
            RL LKL   D+  P+  TY                A++ G+C +  M+ A+ + E M  
Sbjct: 353 RRLLLKLFYDDSI-PSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN 411

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +   PN   Y  +I+GHC++GN  +AY L   M      P+     A++  L  +G   E
Sbjct: 412 KNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGE 471

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
             E++    +     D     +L+  + K+        L   M K GL P     T  IA
Sbjct: 472 LNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAIA 531


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 230/474 (48%), Gaps = 26/474 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC---ELG---LVEYAEEVFD 212
           +V  +   G     + +   MT  G P      N  +G  C   EL    L++  E+V++
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C +G+  +A + L  M+ +G + D +T T +IT  C   
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               ++++F L +EM R G  P+VYT+T+LID  CK G  E+A R +   +RS    PNV
Sbjct: 467 ---KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA-RSWFDEMRSVGCSPNV 522

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TYTA++  Y K +++ +A  +  RM +    PN  TY++LI G CK G  ++A ++ + 
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 393 M--------------GKEGCT--PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +              G + CT  PN+  Y A+IDGLCK  +V +A+ELL        + +
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           +I Y  L+    K  +   A  +F RM K G  P +H YT+LI    +  ++  + K   
Sbjct: 643 QIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E +     P   TYT+MI G  + G I  A+     M + GC+P+ +TY ALI GL K  
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           K D + + ++ M  KG +P  VT   L    C  G    A ++L+ +    W +
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPK 816



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 227/531 (42%), Gaps = 99/531 (18%)

Query: 139 CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
           C  + ++  NF R      C+      +G+ ++ F ++ EM   G    TST  +V+   
Sbjct: 413 CVLNKVNTANFSR------CLCG----VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   VE +  +F EM   GV  D  +Y +++ ++C+ G + +A  W   M   G   + 
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+ A+        + QA ++   MV     PN  T++ LIDGLCK G  +KA  +
Sbjct: 523 VTYTALLHAYLKSK---QLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579

Query: 319 FLKL------VRSDNY---------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           + KL      V SD Y          PNV TY A+I G CK +K++ A  LL+ M   G 
Sbjct: 580 YEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC 639

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYD-------------------LMDLMGKEG------- 397
            PN   Y +LI G CK+G  + A +                   L+D M K+G       
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 398 ---------CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
                    C PN+  Y A+IDGL K G +++A  LL    ++    + +TYT L+    
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE------------------ 490
           K  +   +L LF +M   G  P+   Y  LI   C    + E                  
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819

Query: 491 ---------SEKF------FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
                    S+KF       +E  +    P    Y  +I  + + G + +A++  + + +
Sbjct: 820 GYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879

Query: 536 IGCAPDNIT---YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           +  + +  +   Y +LI  LC  S+++EA   Y  M  KGI P  +  V+L
Sbjct: 880 VSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSL 930



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 199/434 (45%), Gaps = 48/434 (11%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+  +   ++   LN +V   C  GL + A E    +   G    A +Y  +V      G
Sbjct: 159 EIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAG 218

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +V    R    M   G  +D +T+     A C  G       A  +LE   ++ +  +  
Sbjct: 219 QVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVG---RWADALNMLE---KEDFNLDTV 272

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
             T +I GL +     +A   FL  +R ++  PNV TY  ++SG+ K+++    + ++  
Sbjct: 273 LCTQMISGLMEASLFNEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINM 331

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK-- 415
           M  +G  PN + + SL++G+C  G++  AY L + M   G  P   AYN  I  +C +  
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEE 391

Query: 416 ---------------------------------------GRVQEAYELLKKAFQRELQAD 436
                                                  G+ ++A+++LK+  ++    D
Sbjct: 392 LPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPD 451

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TYT +++   +  + +++  LF  M +AG+NPD++ YT LI +FC+   ++++  +F 
Sbjct: 452 TSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFD 511

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E  + G  P   TYT+++  YL+   +  A   F RM    C P+ +TY ALI GLCK  
Sbjct: 512 EMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAG 571

Query: 557 KLDEACQFYESMIG 570
           ++ +AC+ YE +IG
Sbjct: 572 EIQKACEVYEKLIG 585



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 230/552 (41%), Gaps = 83/552 (15%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +  E+GRLK+           G      T N +V +    G VE    V  EM A G C 
Sbjct: 188 ALEELGRLKD----------FGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCM 237

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D S+      A C++GR  +A   L+ +      LD    T +I+   +        +A 
Sbjct: 238 DRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASL---FNEAM 291

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKK---GWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             L  M      PNV T+  L+ G  KK   GW ++     + ++ ++   PN   + ++
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKR----IINMMMTEGCNPNPSLFNSL 347

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNT---NTYTSLIYGH------------------ 377
           + GYC       A  L  RM   G  P     N +   I G                   
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407

Query: 378 --------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
                               C VG FE+A+ ++  M ++G  P+   Y  +I  LC+  +
Sbjct: 408 MLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKK 467

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V++++ L ++  +  +  D  TYTIL+    K    +QA   F  M   G +P++  YT 
Sbjct: 468 VEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTA 527

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK--------- 528
           L+ A+ + K++ ++   F   + A  +P   TY+++I G  + G I  A +         
Sbjct: 528 LLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTS 587

Query: 529 -------YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
                  YF+  +    AP+ +TYGALI GLCK  K+ +A +  ++M+  G  P ++   
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGK 638
            L   +CK G    A  +   + K  ++ +V+T   LI ++  + R+ +A     ++L  
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707

Query: 639 DQNVDRVSLAAL 650
             N + V+  A+
Sbjct: 708 SCNPNVVTYTAM 719



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 175/397 (44%), Gaps = 15/397 (3%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y      L   G  ++A EV + ++ +    G ++  F      T    P + +    + 
Sbjct: 560 YSALIDGLCKAGEIQKACEVYEKLIGT---SGNVESDFYFEGNDTCTIAPNVVTYGALID 616

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
           G+ C+   V  A E+ D M A G   +   Y  ++  +C++G++  A      M   G +
Sbjct: 617 GL-CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL 675

Query: 256 LDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
               T T LI    D+ F+ G +  A ++L EM+     PNV T+T +IDGL K G  EK
Sbjct: 676 PSVHTYTSLI----DRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  L L L+      PNV TYTA+I G  K  K + +  L ++M  +G  PN  TY  LI
Sbjct: 732 ALNL-LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              C  G  + A+ L+D M       ++  Y+  + G  KK     +  LL++    E  
Sbjct: 791 NHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETV 848

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA---YTTLIAAFCRQKKMKES 491
                Y +L+    K    + AL L   +V+   + ++ +   Y +LI A C   +++E+
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
              + E    G+ P    + S++ G +       A++
Sbjct: 909 FTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQ 945


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 211/430 (49%), Gaps = 17/430 (3%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C+   ++ A ++F++M  R V  D+ SY +++    + G++ +A      +L 
Sbjct: 292 NIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G        T LI   C      S   A EL  +M R+G  P+  T+ V+ID  CK+G 
Sbjct: 352 SGVTPSTVAYTSLIHGLC---MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E+A  L  K++  D + P+V TY  ++ G CK  ++  A +L   M+  G  PN  ++ 
Sbjct: 409 LEEACDLIKKMI-EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467

Query: 372 SLIYG---------HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           ++I G          C+ G  + A+ L+  M  +G  P++  Y+ +I GLC   RV +A 
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            LL+   +R+ +   +T   L+    K    K+A  +   MV +G +PD+  Y TL+   
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 587

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR  + + + +   + +  GL P   TYT+++ G  +   +  A   F +M   GCAP+ 
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 647

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-- 600
            TY ALI G C   ++D   + +  M+  GISP  V   TLA E CK G SA A+ IL  
Sbjct: 648 FTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707

Query: 601 --ESLDKKLW 608
             ESL  + W
Sbjct: 708 GRESLRSEAW 717



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 234/504 (46%), Gaps = 27/504 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   A+ G+L +  ++  ++ ++G+   T     ++   C     + A E+F +M  RG
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y +M+ A C+ G + EA   +  M++ G + D  T   ++   C       ++
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS---RVE 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK---------KGWTEKAFRLFLKLVRSDNYK 329
           +A  L  EM R G  PN  +H  +I GLC+         +G  ++AFRL LK +  D + 
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL-LKRMTDDGHV 504

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V TY+ +ISG C   +++ A  LLE M ++   P   T  +LI+G CK G  + A ++
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +D M   G +P++  YN ++ G C+ G+ + A ELL     R L  + +TYT L+S   K
Sbjct: 565 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 624

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +A G+F +M  +G  P++  YT LI  FC   ++    K F E + AG+ P    
Sbjct: 625 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 684

Query: 510 YTSMICGYLRDGNISSAVKYFQ--RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           Y ++     + G  + A++  +  R +    A  +  Y   + GL +  K++ A  F   
Sbjct: 685 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 744

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           M+  G  P      +L    CK G    A  +LE +    +              K  G 
Sbjct: 745 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY------------GGKARGK 792

Query: 628 AALFFHKLLGKDQNVDRVSLAALK 651
           AA F  +++GK   ++   L  LK
Sbjct: 793 AAKFVEEMVGKGYEIEDAVLGPLK 816



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 28/437 (6%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E  +++   M  RG   D+ ++  ++   C+ G++ EA+  +  M  R      AT + L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
               C    RGS+++AF+LLE M       N   + +++  LCK    + A  L   +  
Sbjct: 121 AHELC---LRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTM-- 171

Query: 325 SDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           S+   P    +  +++ G     +++ A   L+  +E    P   T   L+ G C  G  
Sbjct: 172 SEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGFCSRGQV 228

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT---- 439
           ++A +L+  M  E C P+  +Y  ++DGLCK GRV+EA  L      REL +   +    
Sbjct: 229 DKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG---DRELPSSSSSSSSP 285

Query: 440 -----YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                Y I++    +     +A+ +F +M +  ++PD  +Y  LI    +  K+ ++   
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           FQ+ + +G+ P+   YTS+I G     +   A + F  MN+ GC P  +TY  +I   CK
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 405

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RT 611
           +  L+EAC   + MI  G  P  VT  T+    CK      A+++   +++       R+
Sbjct: 406 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465

Query: 612 VNTLIRKLCSEKRVGMA 628
            NT+I  LC + ++  A
Sbjct: 466 HNTIILGLCQQSKIDQA 482



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 158/371 (42%), Gaps = 71/371 (19%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M ++G  P     T +I G C  G T +A ++F  +    +  P+V  Y  +I    K +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP------ 400
           +    + +++ M ++G  P++ T+T+++ G CK G  + A  +MD M      P      
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 401 -------------------------NIYAYNAIIDGLCKKGRVQEAYEL----------- 424
                                    N  AYN ++  LCK  RV +A EL           
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPL 178

Query: 425 -----------------LKKAFQ--RELQADK--ITYTILLSEHLKQAETKQALGLFCRM 463
                            + +A Q  RE + +   +T  +LL     + +  +A  L   M
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE------AITAGLFPTKETYTSMICGY 517
                 PD  +Y T++   C+  +++E+ + F +      + ++   P+   Y  +I G 
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++  I  AV+ F++MN+   +PD+ +YG LI GL K  KL++A   ++ ++  G++P  
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 578 VTRVTLAYEYC 588
           V   +L +  C
Sbjct: 359 VAYTSLIHGLC 369



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 21/352 (5%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    +T++I G+C   +   A  +   M E+   P  + Y  LI    K    E    +
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKM 66

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           + +M   GC P+ + +  I+ GLCK G++ EA  ++ +   R +     T + L  E   
Sbjct: 67  VQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCL 126

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           +   ++A  L   M  A    +  AY  ++ A C+  ++ ++ +  +      +     +
Sbjct: 127 RGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGS 182

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
             S++ G +  G I  A++ ++   +  C    +T   L+ G C + ++D+A +   +M 
Sbjct: 183 LDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARELLRAMP 239

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-----------IRTVNTLIRK 618
            +  +P EV+  T+    CK G    A+ +    D++L            +R  N +I  
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG--DRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           LC   R+  A   F K+  ++ + D  S   L +   ++ K     +L Q++
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 2/163 (1%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G+ P    +T++I  +C   +  E+ K F   +     P  + Y  +I    +   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
             +  K  Q M   GC PD+ T+  ++ GLCK  K+DEA    + M  + I P   T   
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           LA+E C +G    A  +LE +         N ++  LC   RV
Sbjct: 120 LAHELCLRGSMERAFQLLEIM-PVANSSAYNIVVVALCKAARV 161


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 280/623 (44%), Gaps = 35/623 (5%)

Query: 57  PPQSLVKTVCSMVLE---SYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGS 113
           PP + +++  ++ LE      Q   +  S  RL   +  +    ++ + V+  +     S
Sbjct: 13  PPSASLQSNRALTLEERRDVRQLLQIVESSSRLGFSMKWNGQLSQRLVGVILHMVKNGES 72

Query: 114 MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ---------------C 158
             A+ FF WA     FRH +  Y     +LI  G  E A+ + +                
Sbjct: 73  --AMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGI 130

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++      G+LK   S+  EM + GL  +  T   ++   C+ G +E A   F++M +  
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS-- 188

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A+++ +++    R  RV EA  +   M    AI +N T T++I      G    + 
Sbjct: 189 -IPCAATWTILIDGLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAG---KVA 243

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L+EM      P +  +T +I G CK G   KA+ L L+ ++   Y+ +  TY  +
Sbjct: 244 EAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHL-LEDMKRKGYQGDNLTYNTL 298

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEG 397
           I G+C+ ++++RA  LLE MK    +P+  TY  LI G C+      A DL+  L  ++ 
Sbjct: 299 IHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDD 358

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CTPN+ +YN +IDG  K  RV +AY+L  +        D +TY+ L+          +A 
Sbjct: 359 CTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAH 418

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
                MV   + P +  Y+++I+  CR  ++  +   F   +  G  P    Y S+I G 
Sbjct: 419 SYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A    + M + GC+PD +TYG LI GLC+ S+ DEAC  Y   + +GI   E
Sbjct: 479 CKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISE 538

Query: 578 VT-RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            +  V +A   C +       ++L + +         T+I  LC E  +  A      ++
Sbjct: 539 TSCNVVIASLRCLEQAQRVLRVVLATGNSPTAF-FYATVIESLCKENNLAEARQLLEDMI 597

Query: 637 GKDQNVDRVSLAALKNACYESNK 659
           G     D  ++ AL  A    +K
Sbjct: 598 GAGIKPDGSTVDALVGAMCRQDK 620



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 214/446 (47%), Gaps = 12/446 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G++ E   ++ EM    L   TS    V+G  C+ G +  A  + ++M  +G
Sbjct: 232 VINGLVKAGKVAEAERVLQEMPVPTLANYTS----VIGGHCKAGDMGKAYHLLEDMKRKG 287

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +CR+  +  A   L  M     + D  T  +LI   C       + 
Sbjct: 288 YQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAK---RLS 344

Query: 279 QAFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A +LL  +  +    PNV ++  LIDG  K      A++LFL++V +  + P+V TY+ 
Sbjct: 345 EARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH-PDVVTYST 403

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G C   + + A   LE M  + +LP    Y+S+I G C+ G  + A  + D M   G
Sbjct: 404 LIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANG 463

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  YN++I GLCK GR+ +A   +K+  +R    D +TY  L+    + + T +A 
Sbjct: 464 CQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEAC 523

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+ R ++ G+     +   +IA+    + ++++++  +  +  G  PT   Y ++I   
Sbjct: 524 DLYVRSLEQGIEISETSCNVVIASL---RCLEQAQRVLRVVLATGNSPTAFFYATVIESL 580

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++ N++ A +  + M   G  PD  T  AL+  +C+Q K   A  F E M+  G  P  
Sbjct: 581 CKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSV 640

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
            T  TL     K G  + A ++L  L
Sbjct: 641 GTYSTLLNALFKAGKPSEAHVVLRRL 666



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 214/552 (38%), Gaps = 84/552 (15%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM-----------VSSFAEIGRLKEGFSMVIEMTNNGL 184
           Y V    L+  G    A  V+Q M           +    + G + + + ++ +M   G 
Sbjct: 229 YTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGY 288

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T N ++   C L  ++ A E+ +EM +     D  +Y +++   CR  R++EA  
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348

Query: 245 WLSA------------------------------------MLDRGAILDNATLTLLITAF 268
            L                                      M+  G   D  T + LI   
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C+ G R S  +A   LEEMV K   P V  ++ +I GLC+ G  + A  +F  +V ++  
Sbjct: 409 CNAG-RAS--EAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMV-ANGC 464

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +PN+  Y ++I G CK  ++  A++ ++ M E+G  P+  TY +LI G C+    + A D
Sbjct: 465 QPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACD 524

Query: 389 L--------------------------------MDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           L                                + ++   G +P  + Y  +I+ LCK+ 
Sbjct: 525 LYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKEN 584

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            + EA +LL+      ++ D  T   L+    +Q +   A+     MV+ G  P +  Y+
Sbjct: 585 NLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYS 644

Query: 477 TLIAAFCRQKKMKESEKFFQEAIT-AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           TL+ A  +  K  E+    +  I+    FP +  Y  +I  Y     +  A    Q +  
Sbjct: 645 TLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKS 704

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
                  + Y  L+ GL +   L    +    M        E T   L   +C+ G +  
Sbjct: 705 KWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDR 764

Query: 596 AMIILESLDKKL 607
           A+ +L  + K L
Sbjct: 765 AVRVLSEMKKVL 776



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 8/297 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++       R  E   + +     G+ +  ++ N V+     L  +E A+ V   + A G
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIA---SLRCLEQAQRVLRVVLATG 565

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A  Y  ++ + C+   + EA + L  M+  G   D +T+  L+ A C +  +  + 
Sbjct: 566 NSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQD-KAVVA 624

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF  LEEMVR G KP+V T++ L++ L K G   +A  +  +L+   +  P+   Y  +
Sbjct: 625 MAF--LEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGL 682

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+ Y  ++++  A  +L+ +K +  + +   Y +L+ G  +  N +  Y+L+  M +   
Sbjct: 683 IAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEF 742

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
             N   +N +I G C+ G+   A  +L +   +++          L + L +AE +Q
Sbjct: 743 VVNEATFNILIQGFCRLGQTDRAVRVLSE--MKKVLTPSAAIIKFLVDELARAEREQ 797


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 203/384 (52%), Gaps = 4/384 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   CE G +E + ++  E+   G   +   Y  ++   C+ G + +A      M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            + +  T T+LI      G +   KQ FE+ E+M   G  PN+YT+  +++ LCK G T+
Sbjct: 229 LVANEWTYTVLIHGLFKNGIK---KQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTK 285

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            AF++F ++ R      N+ TY  +I G C+E K N A  ++++MK   + PN  TY +L
Sbjct: 286 DAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C VG   +A  L   +   G +P++  YN ++ G C+KG    A +++K+  +R +
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +  K+TYTIL+    +    + A+ L   M + GL PD+H Y+ LI  FC + +M E+ +
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F+  +   L P +  Y +MI GY ++G+   A++ F+ M +   AP+  +Y  LI  LC
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524

Query: 554 KQSKLDEACQFYESMIGKGISPCE 577
           K+ KL EA    E MI  GI P +
Sbjct: 525 KERKLKEAEDLVEKMIDSGIDPSD 548



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 210/394 (53%), Gaps = 11/394 (2%)

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            +LD  +  ++I   C+ G    I+++F+LL E+   G+ PNV  +T LIDG CKKG  E
Sbjct: 159 VVLDVYSFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA  LF ++ +      N  TYT +I G  K     +   + E+M+E G+ PN  TY  +
Sbjct: 216 KAKDLFFEMGKF-GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           +   CK G  + A+ + D M + G + NI  YN +I GLC++ +  EA +++ +     +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESE 492
             + ITY  L+       +  +AL L CR +K+ GL+P +  Y  L++ FCR+     + 
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSL-CRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K  +E    G+ P+K TYT +I  + R  N+ +A++    M ++G  PD  TY  LI G 
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGF 453

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           C + +++EA + ++SM+ K + P EV   T+   YCK+G S  A+ +   +++K     V
Sbjct: 454 CIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNV 513

Query: 613 NT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            +   LIR LC E+++  A     K++  D  +D
Sbjct: 514 ASYSYLIRVLCKERKLKEAEDLVEKMI--DSGID 545



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 4/304 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  K+GF M  +M  +G+     T N V+   C+ G  + A +VFDEM  RGV  +  +Y
Sbjct: 247 GIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTY 306

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR  +  EA++ +  M       +  T   LI  FC  G  G   +A  L  +
Sbjct: 307 NTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLG---KALSLCRD 363

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +  +G  P++ T+ VL+ G C+KG T  A ++ +K +     KP+  TYT +I  + + +
Sbjct: 364 LKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM-VKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M  A  L   M+E GL+P+ +TY+ LI+G C  G    A  L   M ++   PN   YN
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I G CK+G    A  L +   ++EL  +  +Y+ L+    K+ + K+A  L  +M+ +
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDS 542

Query: 467 GLNP 470
           G++P
Sbjct: 543 GIDP 546



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 142/271 (52%), Gaps = 4/271 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++   + GR K+ F +  EM   G+     T N ++G  C       A +V D+M +
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
             +  +  +Y  ++  +C +G++ +A      +  RG      T  +L++ FC K   G 
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRK---GD 388

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
              A ++++EM  +G KP+  T+T+LID   +    E A +L   +       P+VHTY+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM-EELGLVPDVHTYS 447

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+C + +MN A  L + M E+ L PN   Y ++I G+CK G+  RA  L   M ++
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              PN+ +Y+ +I  LCK+ +++EA +L++K
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 1/122 (0%)

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  +I A+ + + +  S  +F E +  G  P    + +++   +   + +    +F   +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +I    D  ++G +I G C+  +++++      +   G SP  V   TL    CK+G+  
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 595 TA 596
            A
Sbjct: 216 KA 217


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D  +  +++  +C MG++T     L+ +L RG   D  TL  LI   C    +G 
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC---LKGQ 144

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    ++++ +G++ N  ++  LI+G+CK G T  A + FL+ +     KP+V  Y 
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIK-FLRKIDGRLTKPDVVMYN 203

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  +  TY +LIYG C VG  + A  L++ M  +
Sbjct: 204 TIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+Y YN ++D LCK+G+V+EA  +L    +  ++ D ITY+ L+  +    E K+A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M   G+ PD+H YT LI  FC+ K + E+   F+E     + P   TY+S+I G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G IS        M   G   D ITY +LI GLCK   LD A   +  M  + I P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
             T   L    CK G    A  + + L  K   L + T N +I   C +
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 224/453 (49%), Gaps = 39/453 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G P  T TLN ++   C  G V+ A    D++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 216 ARGVCADASSYKLMVVAYCRMGR-----------------------------------VT 240
           A+G   +  SY  ++   C++G                                    V+
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA    S M  +G   D  T   LI  FC     G +K+A  LL EMV K   PNVYT+ 
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFC---IVGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+D LCK+G  ++A  +   ++++   KP+V TY+ ++ GY    ++ +A+ +   M  
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+ +TYT LI G CK    + A +L   M ++   P I  Y+++IDGLCK GR+  
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            ++L+ +   R   AD ITY+ L+    K     +A+ LF +M    + P+I  +T L+ 
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K++++ FQ+ +T G      TY  MI G+ + G +  A+    +M   GC P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  T+  +I  L K+ + D+A +    MI +G+
Sbjct: 513 NAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 11/346 (3%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +  + A  L  R++ +G+ P+  T   LI   C +G     +
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  + K G  P+    N +I GLC KG+V++A     K   +  Q ++++Y  L++  
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174

Query: 448 LKQAETKQALGLFCRMVKAGLN-PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
            K  +T+ A+  F R +   L  PD+  Y T+I A C+ + + E+   F E    G+   
Sbjct: 175 CKIGDTRAAIK-FLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISAD 233

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY ++I G+   G +  A+     M      P+  TY  L+  LCK+ K+ EA     
Sbjct: 234 VVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 567 SMIGKGISPCEVTRVT------LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
            M+   + P  +T  T      L YE  K      AM ++        + T   LI   C
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD---VHTYTILINGFC 350

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
             K V  A   F ++  K+     V+ ++L +   +S + +   DL
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++ F +   + E  ++  EM   N +P I +  + + G+ C+ G + Y  ++ DEM  R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL-CKSGRISYVWDLIDEMRDR 403

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G  AD  +Y  ++   C+ G +  A    + M D+    +  T T+L+   C KG  G +
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC-KG--GRL 460

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A E+ ++++ KG+  NVYT+ V+I+G CK+G  E+A  +  K+   +   PN  T+  
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM-EDNGCIPNAFTFET 519

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I    K+++ ++AE LL +M  +GLL
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 3/199 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F RM+     P I  +  ++ +F + K    +          G+ P   T   +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G I+       ++ + G  PD +T   LI GLC + ++ +A  F++ ++ +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK GD+  A+  L  +D +L    V   NT+I  +C  + V  A   
Sbjct: 162 LNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL 221

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F ++  K  + D V+   L
Sbjct: 222 FSEMAVKGISADVVTYNTL 240



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 3/135 (2%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  AV  F RM  +   P  I +  ++    K      A      +  KGI P  +T  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   +C  G       +L  + K+ +     T+NTLI+ LC + +V  A  F  KLL +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 639 DQNVDRVSLAALKNA 653
              +++VS A L N 
Sbjct: 159 GFQLNQVSYATLING 173


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 241/473 (50%), Gaps = 6/473 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C  G +  A     +M   G+  DA +Y  ++ A+CR G + EA   L+ M
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G +   AT   L++A+   G+   IKQA +++E M   G++P+++T+ VL  GLC+ 
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGW---IKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQA 327

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++AF+L  ++ +     P+V TY  ++    K ++ + A  LLE M+E+G+  +  T
Sbjct: 328 GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +  ++ G C+ G  E A   +++M +EG TP++  YN +ID  CK G V +A+ L+ +  
Sbjct: 388 HNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  L+ D  T   LL    K+   ++A  L     + G  PD  +Y T++AA+ ++ K +
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   + E I   L P+  TY ++I G    G ++ A+     + ++G  PD+ TY  +I
Sbjct: 508 PALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKK 606
              CK+  L++A QF+  M+     P  VT  TL    C  G    AM + ES     KK
Sbjct: 568 HAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKK 627

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           + + T NTLI+ LC +  V  A  FF  +  +    D  +   L +A  E+ +
Sbjct: 628 VDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 234/487 (48%), Gaps = 8/487 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +V +    G L +  S + +M   GL     T N ++   C  G++  A  +  
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G+    ++Y  +V AY R+G + +A   + AM   G   D  T  +L    C   
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQA- 327

Query: 273 FRGSIKQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
             G + +AF+L +EM + G   P+V T+  L+D   K   +  A  L L+ +R    K +
Sbjct: 328 --GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL-LEEMREKGVKSS 384

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + T+  ++ G C+E ++  A   LE M E+GL P+  TY +LI   CK GN  +A+ LMD
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G   + +  N ++  LCK+ R +EA ELL+   QR    D+++Y  +++ + K+ 
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + + AL L+  M+K  L P I  Y TLI       K+ E+     E +  GL P   TY 
Sbjct: 505 KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYN 564

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I  Y ++G++  A ++  +M +    PD +T   L++GLC   +L++A + +ES + K
Sbjct: 565 IIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK 624

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G     +T  TL    CK  D  TA+     ++ +     + T N L+  L    R   A
Sbjct: 625 GKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEA 684

Query: 629 ALFFHKL 635
               HKL
Sbjct: 685 QKMLHKL 691



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 208/478 (43%), Gaps = 53/478 (11%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL--PLITSTLNRVVGIACELGLVEY 206
           FE        + +   + G++ E F +  EM   G+  P +  T N +V    +      
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVV-TYNTLVDACFKCQRSSD 368

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + +EM  +GV +   ++ ++V   CR G++ EA   L  M + G   D  T   LI 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL-------- 318
           A C  G   ++ +AF L++EMVR G K + +T   L+  LCK+   E+A  L        
Sbjct: 429 ASCKAG---NVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 319 --------------FLKLVRSD------------NYKPNVHTYTAMISGYCKEEKMNRAE 352
                         + K  + +               P++ TY  +I G     K+  A 
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
             L  + E GL+P+  TY  +I+ +CK G+ E+A+   + M +    P++   N +++GL
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGL 605

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C  GR+++A +L +   ++  + D ITY  L+    K  +   AL  F  M   GL PD+
Sbjct: 606 CLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAG------LFPT-KETYTSMICGYLRDGNISS 525
             Y  L++A     +  E++K   +   +G       +P+ K +  ++  G  +D  + S
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETG--KDPEVKS 723

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            ++            D  +Y   I  LC   +L EA    + M+ KG+S    T +TL
Sbjct: 724 DIESVGNTQ----GDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITL 777



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 4/266 (1%)

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L PN  T+  L++ HC  G    A   +  M   G +P+   YN +++  C+KG + EA 
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            LL +  +  +   + TY  L+S + +    KQA  +   M   G  PD+  Y  L A  
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324

Query: 483 CRQKKMKESEKFFQEAITAGLF-PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           C+  K+ E+ K   E    G+  P   TY +++    +    S A+   + M + G    
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +T+  ++ GLC++ +L+EA    E M  +G++P  +T  TL    CK G+ A A ++++
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKR 624
            + +   K+   T+NTL+  LC EKR
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKR 470



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 40/397 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V      G+L+E    +  MT  GL     T N ++  +C+ G V  A  + DEM   G
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +   ++   C+  R  EA+  L A   RG + D  +   ++ A+  K ++   +
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYF-KEYKP--E 507

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM+++   P++ T+  LI GL   G   +A     +L+      P+  TY  +
Sbjct: 508 PALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM-GLVPDDTTYNII 566

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YCKE  + +A     +M E    P+  T  +L+ G C  G  E+A  L +   ++G 
Sbjct: 567 IHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK 626

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS---EHLKQAETKQ 455
             ++  YN +I  LCK   V  A         R LQ D  TY +LLS   E  +  E ++
Sbjct: 627 KVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQK 686

Query: 456 AL-------GLFCRM-----------VKAGLNPDI---------------HAYTTLIAAF 482
            L        L+ R            V+ G +P++                +Y   I   
Sbjct: 687 MLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKEL 746

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           C   ++KE++    E +  G+     TY +++ G ++
Sbjct: 747 CIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 166/384 (43%), Gaps = 43/384 (11%)

Query: 280 AFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWT--EKAFRLFLKLVRSDNYKPNVHTYT 336
           A +LL    R+G  +P++     ++  L +   T  + +   F  L+ +    PN +T+ 
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI-ALRLHPNHYTFN 213

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C +  +  A   L +M+  GL P+  TY +L+  HC+ G    A  L+  M KE
Sbjct: 214 LLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE 273

Query: 397 GCT-----------------------------------PNIYAYNAIIDGLCKKGRVQEA 421
           G                                     P+++ YN +  GLC+ G+V EA
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333

Query: 422 YELLKKAFQREL-QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           ++L  +  Q  +   D +TY  L+    K   +  AL L   M + G+   +  +  ++ 
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVK 393

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             CR+ +++E+    +     GL P   TY ++I    + GN++ A      M + G   
Sbjct: 394 GLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM 453

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D  T   L+  LCK+ + +EA +   +   +G  P EV+  T+   Y K+     A+ + 
Sbjct: 454 DTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513

Query: 601 ESLDKKLW---IRTVNTLIRKLCS 621
           + + K+     I T NTLI+ L +
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLST 537



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 40/365 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G + + F ++ EM  +GL + T TLN ++   C+    E AEE+      RG
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++ AY +  +   A      M+ R      +T   LI         G + 
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLST---MGKLT 542

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L E++  G  P+  T+ ++I   CK+G  EKAF+   K+V  +++KP+V T   +
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVE-NSFKPDVVTCNTL 601

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C   ++ +A  L E   E+G   +  TY +LI   CK  + + A      M   G 
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKK--------------AFQRELQA--------- 435
            P+++ YN ++  L + GR  EA ++L K              + +  ++A         
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 436 -------------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
                        D+ +Y   + E     + K+A  +   M++ G++ D   Y TL+   
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781

Query: 483 CRQKK 487
            +++K
Sbjct: 782 IKRQK 786



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 7/247 (2%)

Query: 386 AYDLMDLMGKEGCT-PNIYAYNAIIDGLCKKGRV--QEAYELLKKAFQRELQADKITYTI 442
           A  L+    + GC  P++ A NA++  L +      Q + +         L  +  T+ +
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H  +     AL    +M   GL+PD   Y TL+ A CR+  + E+          G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + PT+ TY +++  Y R G I  A    + M   G  PD  TY  L +GLC+  K+DEA 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 563 QFYESMIGKGI-SPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
           +  + M   GI SP  VT  TL     K   S+ A+ +LE + +   K  + T N +++ 
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 619 LCSEKRV 625
           LC E ++
Sbjct: 395 LCREGQL 401


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 229/444 (51%), Gaps = 9/444 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CEL   + A E FD M  +GV     ++  M+  + ++ + TE    L A + R  I   
Sbjct: 177 CELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQ-TETVWVLYAEMFRLKIKST 235

Query: 259 A-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  ++I   C +G    +K+A + +  M   G KPNV T+  +I G C +G  E A R
Sbjct: 236 VYTFNIMINVLCKEG---KLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA-R 291

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           + L ++++   +P+ +TY ++ISG CK  K+  A  +LE+MKE GLLP   TY +LI G+
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C  G+  +A+   D M +    P +  YN +I  L  +G++ EA  ++K      +  D 
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY IL++ + +    K+A  L   M+  G+ P +  YT+LI    ++ +MK ++  F++
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I  G  P    + ++I G+  +GN+  A    + M++    PD +TY  L+ G C++ K
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNT 614
           ++EA +  + M  +GI P  ++  TL   Y K+GD   A  I +   S+     + T N 
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK 638
           LI+ LC  ++  +A     +++ K
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSK 615



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 224/443 (50%), Gaps = 4/443 (0%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M+S F ++ + +  + +  EM    +     T N ++ + C+ G ++ A++    
Sbjct: 202 ETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGS 261

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV  +  +Y  ++  YC  GRV  A   L  M +RG   D+ T   LI+  C KG 
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC-KG- 319

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G +++A  +LE+M   G  P   T+  LIDG C KG   KAF    ++VR     P V 
Sbjct: 320 -GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR-AILPTVS 377

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY  +I     E KM+ A+ +++ M + G++P++ TY  LI G+C+ GN ++A++L D M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P +  Y ++I  L K+ R++ A +L +K  +     D I +  L+  H      
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  L   M K  + PD   Y TL+   CR+ K++E+ +  +E    G+ P   +Y ++
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I GY + G+I+ A      M  IG  P  +TY ALI GLCK  + D A +  + M+ KGI
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617

Query: 574 SPCEVTRVTLAYEYCKQGDSATA 596
           +P + T  +L     K  DS+ A
Sbjct: 618 TPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 7/342 (2%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I   C+ ++ + A    + MKE+G++P   T+ +++    K+   E  + L   M 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +      +Y +N +I+ LCK+G++++A + +       ++ + +TY  ++  +  +   +
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +   M   G+ PD + Y +LI+  C+  K++E+    ++    GL PT  TY ++I
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   G++  A  Y   M +    P   TY  LI  L  + K+DEA    + M   GI 
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  +T   L   YC+ G++  A  + + +  K     + T  +LI  L    R+  A   
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQR 669
           F K++ +  + D +   AL +  C   N    +AL  ++ +R
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKR 510



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 4/230 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +   G  K+ F++  EM + G+     T   ++ +  +   ++ A+++F+++   G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   +  ++  +C  G +  A   L  M  R  + D  T   L+   C +G    ++
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG---KVE 533

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL+EM R+G +P+  ++  LI G  K+G    AF +  +++ S  + P + TY A+
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML-SIGFNPTLLTYNAL 592

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           I G CK ++ + AE LL+ M  +G+ P+ +TY SLI G  KV +   A D
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 4/275 (1%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            ++ +I   C+  R  +A+E      ++ +     T+  +LS  LK  +T+    L+  M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            +  +   ++ +  +I   C++ K+K+++ F       G+ P   TY ++I GY   G +
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A      M   G  PD+ TYG+LISG+CK  KL+EA    E M   G+ P  VT  TL
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQ 640
              YC +GD   A    + + ++  + TV+T   LI  L  E ++  A      +     
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407

Query: 641 NVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             D ++   L N  C   N    F+   + I++GI
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 218/440 (49%), Gaps = 16/440 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +  A  + D M   G+     +Y  +V   C++G    A   L  M +   I+ N
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPN 254

Query: 259 ATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             + + +I + C  G R S  Q   L  EM  KG  P+++T+  +I G C  G    A +
Sbjct: 255 VVIYSAIIDSLCKDG-RHSDAQ--NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +++      P+V TY A+I+ + KE K   AE L + M  +G++PNT TY+S+I G 
Sbjct: 312 LLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A  +  LM  +GC+PN+  +N +IDG C   R+ +  ELL +  +  L AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ- 496
            TY  L+       +   AL L   M+ +GL PDI    TL+   C   K+K++ + F+ 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 497 -----EAITA-----GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
                + + A     G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 607 LWIRTVNTLIRKLCSEKRVG 626
             +    T I  +C  ++VG
Sbjct: 611 GIVANAITYITLICGFRKVG 630



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T++ +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    PN+ T+  +I GYC  ++++    LL  M E GL+ +T TY +L
Sbjct: 378 AAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQR 431
           I+G   VG+   A DL+  M   G  P+I   + ++DGLC  G++++A E+ K  +  ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 432 ELQA---------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L A         D  TY IL+S  + + +  +A  L+  M   G+ PD   Y+++I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q ++ E+ + F    +    P   T+T++I GY + G +   ++ F  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ITY  LI G  K   ++ A   ++ MI  G+ P  +T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 224/489 (45%), Gaps = 21/489 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G+  D  ++  ++   C   RV+EA      M +     + 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CK G T  A  L
Sbjct: 185 VTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDL 241

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  TY S+I G C
Sbjct: 242 LRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +   R +  + I
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY+ ++    KQ     A  +F  M   G +P++  + TLI  +C  K++ +  +   E 
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TY ++I G+   G++++A+   Q M   G  PD +T   L+ GLC   KL
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + ++ M              G+ P   T   L      +G    A  + E +  + 
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----Y 660
            +    T +++I  LC + R+  A   F  +  K  + + V+   L N   ++ +     
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 661 ALFSDLSQR 669
            LF ++ +R
Sbjct: 602 ELFCEMGRR 610



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T + ++   C+   ++ AE +F  M  +G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  YC   R+ +    L  M + G + D  T   LI  F      G + 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +PN+  +  +I+G CK GRV +  EL  +  +R + A+ ITY  L+    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           K      AL +F  M+ +G+ PD      ++     ++++K +
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++T +I  +C   K+  A     ++ + GL P+  T+ +L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A +L   M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K  +T  AL L  +M + + + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI   C  KR+       H++
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++TIL+      ++   AL  F ++ K GL+PD+  + TL+   C + ++ E+   F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 243/497 (48%), Gaps = 6/497 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G ++E   +  EM   GL L   T N ++G   + G +  A  +F+EM   G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y L++  Y +   + +A   L+ M  R       T ++LI+  C       ++
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS---DLQ 468

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+L++M+R G KPNV+ +  LI    ++   E A  L LK++ ++   P++  Y  +
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL-LKIMIANGVLPDLFCYNCL 527

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+ +K+  A+MLL  M E+G+ PN +TY + I  + K G  + A      M   G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +I G C  G   EA    K   ++ L  D   Y+ ++    K  +TK+A+G
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F + +K G+ PD+  Y +LI+ FC++  ++++ + + E +  G+ P    Y ++I G  
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G ++ A + F  + +    PD +TY  +I G CK   L EA + ++ MI KGISP   
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               L     K+G+   A+ +     +K    +   N+LI   C   +V  A   F  ++
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 637 GKDQNVDRVSLAALKNA 653
            K    + V+   L +A
Sbjct: 828 DKKLTPNIVTYTILIDA 844



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 236/463 (50%), Gaps = 8/463 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++       +++E   ++++M   G+     T    + +  + G ++ AE  F +M +
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +   Y +++  +C +G   EA      ML++G I D    + +I +       G 
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK---NGK 641

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            K+A  +  + ++ G  P+V+ +  LI G CK+G  EKA +L+ +++  +   PN+  Y 
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NGINPNIVVYN 700

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G CK  ++ +A  L + ++E+ L+P+  TY+++I G+CK GN   A+ L D M  +
Sbjct: 701 TLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISK 760

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G +P+ Y Y  +IDG  K+G +++A  L  +A Q+ + +    +  L+    K  +  +A
Sbjct: 761 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEA 819

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  MV   L P+I  YT LI A+ + + M+E+E+ F +  T  + P   TYTS++  
Sbjct: 820 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 879

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y + GN    +  F+ M   G A D I YG + S  CK+ K  EA +     + +GI   
Sbjct: 880 YNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 939

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
           +     L +  CK+   +T + +L  + K+   L  +T NTL+
Sbjct: 940 DDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 218/448 (48%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F +  R KE   +   M ++GL     T   ++    + G +E A  + DEM  RG
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+    + G + +A    + ML  G   D  T  LLI  +        + 
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSH---DMA 433

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL EM  +   P+ +T++VLI GLC     +KA  +  +++R +  KPNV  Y  +
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NGVKPNVFMYGTL 492

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y +E +   A  LL+ M   G+LP+   Y  LI G C+    E A  L+  MG++G 
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y A I+   K G +Q A    K      +  + + YTIL+  H     T +AL 
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M++ GL PDI AY+ +I +  +  K KE+   F + +  G+ P    Y S+I G+ 
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC 672

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G+I  A + +  M   G  P+ + Y  LI+GLCK  ++ +A + ++ +  K + P  V
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T  T+   YCK G+   A  + + +  K
Sbjct: 733 TYSTIIDGYCKSGNLTEAFKLFDEMISK 760



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 259/607 (42%), Gaps = 77/607 (12%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAH--------------EVMQCMVSSF 163
           +FFYW+        ++  Y + A  L ++G   +A               E++  +V  +
Sbjct: 105 NFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCY 164

Query: 164 AEIG-----------------------------RLKEGFSMVIEMTNN-----------G 183
            E G                              + EGF   +   NN           G
Sbjct: 165 REFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 184 L--------------PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           L              P + +  N V+   C++G V   + V  EM  +    +  +Y   
Sbjct: 225 LFWKVYGSMVEAKIVPDVYTYTN-VIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAF 282

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +   C+ G V EA      M+++G   D  T TLL+  FC    +   K+A  + E M  
Sbjct: 283 IGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK---QKRSKEAKLIFESMPS 339

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  PN +T+T LIDG  K+G  E+A R+  +++ +   K NV TY AMI G  K  +M 
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI-TRGLKLNVVTYNAMIGGIAKAGEMA 398

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A  L   M   GL P+T TY  LI G+ K  +  +A +L+  M     TP+ + Y+ +I
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC    +Q+A E+L +  +  ++ +   Y  L+  +++++  + A+ L   M+  G+ 
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y  LI   CR KK++E++    +    G+ P   TY + I  Y + G I  A +Y
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F+ M   G  P+N+ Y  LI G C      EA   ++ M+ KG+ P       + +   K
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            G +  AM +     K   +  V   N+LI   C E  +  A+  + ++L    N + V 
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698

Query: 647 LAALKNA 653
              L N 
Sbjct: 699 YNTLING 705



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 172/389 (44%), Gaps = 36/389 (9%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++ S ++ G+ KE   + ++    G+       N ++   C+ G +E A +++DEM   G
Sbjct: 632  IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            +  +   Y  ++   C++G VT+A      + ++  + D  T + +I  +C  G   ++ 
Sbjct: 692  INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSG---NLT 748

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK--------------LVR 324
            +AF+L +EM+ KG  P+ Y + +LIDG  K+G  EKA  LF +              L+ 
Sbjct: 749  EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808

Query: 325  S-------------------DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            S                       PN+ TYT +I  Y K E M  AE L   M+ + ++P
Sbjct: 809  SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 366  NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
            NT TYTSL+  + ++GN  +   L   M   G   +  AY  +    CK+G+  EA +LL
Sbjct: 869  NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 928

Query: 426  KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
             K+    ++ +   +  L+    K+ +    L L   M K  L+       TL+  F + 
Sbjct: 929  NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKS 988

Query: 486  KKMKESEKFFQEAITAGLFPTKETYTSMI 514
                E+ K        G  PT  + T  I
Sbjct: 989  GNEDEASKVLGVMQRLGWVPTSLSLTDSI 1017



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 9/318 (2%)

Query: 155  VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
            V   +++   ++G + +   +  E+    L     T + ++   C+ G +  A ++FDEM
Sbjct: 698  VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757

Query: 215  CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             ++G+  D   Y +++    + G + +A         + ++   +    LI +FC     
Sbjct: 758  ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK-SVGSLSAFNSLIDSFCK---H 813

Query: 275  GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            G + +A EL ++MV K   PN+ T+T+LID   K    E+A +LFL +  + N  PN  T
Sbjct: 814  GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLT 872

Query: 335  YTAMISGYCKEEKMNRAEM--LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            YT+++  Y   +  NR +M  L + M+ +G+  +   Y  +   +CK G    A  L++ 
Sbjct: 873  YTSLLLSY--NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930

Query: 393  MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
               EG       ++A+I  LCK+ ++    ELL +  + EL     T   LL    K   
Sbjct: 931  SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGN 990

Query: 453  TKQALGLFCRMVKAGLNP 470
              +A  +   M + G  P
Sbjct: 991  EDEASKVLGVMQRLGWVP 1008


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 264/610 (43%), Gaps = 91/610 (14%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+ FF WA G   F+H                 F R      C + +  E G      +M
Sbjct: 109 AIVFFVWA-GDRGFKH---------------STFTR-----NCFLQTLLENGSSDRIPAM 147

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
              M + G    + T + V+   C++  ++ A  + D+   RG   + S Y ++  A+C+
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCK 207

Query: 236 MGRVTE-------------------------------ADRWLSAMLDRGAILDNATLTLL 264
            GR+ +                               A  +L  M +R    D  T  +L
Sbjct: 208 TGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNIL 267

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I   C         +A E+L EMV +G  P+  T   ++DGLCK G  E+A  L L ++ 
Sbjct: 268 IDGLCKA---SKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL-LAVMA 323

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
             N +P+  TY  +ISG CK++ ++RA+ L++     G +P+  TY+ L  G CK G  +
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A++L+  M  +GCTPN+  YN +IDGLCK  + ++AYELL+         D +TYTI++
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI----T 500
               K+    +AL +   M+K G  P +  YT L+   CR  ++ E+   F+E +    T
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503

Query: 501 AGLF----------------------------PTKETYTSMICGYLRDGNISSAVKYFQR 532
           A                               P  + Y +++ GY ++G +      F+ 
Sbjct: 504 ADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC P+  TY  ++ GLCK  K+DEA  F ESM   G  P  V+   +     K   
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 593 SATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A  +L+ + +        T NTL+ + C E+R   A      ++    + D V+   
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 650 LKNACYESNK 659
           L +   ++N+
Sbjct: 684 LISGLSQTNR 693



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 263/551 (47%), Gaps = 38/551 (6%)

Query: 143 LISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           L   G FERAH ++  M               +S   +   +     +V E  ++G    
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T + +    C+ G ++ A E+  EM  +G   +  +Y  ++   C+  +  +A   L 
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +++  G + D  T T+++   C +   G + +A +++E M+++G  P+V T+T L++GLC
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKE---GRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  ++A  +F ++V  D    +   Y ++++GYCK  +   A+ +++ ++     P  
Sbjct: 483 RTGRVDEAHHIFKEMVSKD-CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYI 538

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           + Y +L+ G+CK G  +   ++ + M   GC PNI  YN ++DGLCK G+V EA+  L+ 
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D ++Y I++    K ++ K+A  +  +M++AG+ PD   Y TL+A FC++++
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN-ITYG 546
             ++    +  I AG+ P   TY ++I G  +   +  A +    M + GC      TY 
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +I  LCK+  L +A    + M G G+    VT        CK+G    A  +L  +D  
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
               +  T+I  LC  +++  A+    +++            A+K  C  S+ + L  D 
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMV------------AVKGLCITSHTFNLLIDA 826

Query: 667 ---SQRIAEGI 674
              ++R+ E +
Sbjct: 827 FTKTKRLDEAL 837



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 228/471 (48%), Gaps = 11/471 (2%)

Query: 168 RLKEGFSMVIEMT---NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           RLK+  + ++      + G    T T N  +    E G  +    +F+ M   G   D+ 
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y L++ + C+M ++ +A   L     RG   + +  T+L  AFC  G    +K A E+ 
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTG---RLKDALEIF 218

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
               R    P+   +  +I G C+K   + A   FLK +      P+V TY  +I G CK
Sbjct: 219 ----RNIPSPDAIAYNAIIHGHCRKNDCDGALE-FLKEMNERKVAPDVFTYNILIDGLCK 273

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             K ++A  +L  M ++G+ P+T T+ S++ G CK G FERA+ L+ +M +  C P+   
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +I GLCK+  V  A +L+ +        D +TY+IL     K+    +A  L   M 
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  P++  Y TLI   C+  K +++ +  +  +++G  P   TYT ++ G  ++G + 
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K  + M + GC P  ITY AL+ GLC+  ++DEA   ++ M+ K  +   +  V+L 
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             YCK   +  A  +++ +    +I   N L+   C E R+      F  +
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDM 564



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 237/513 (46%), Gaps = 30/513 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMT 180
           Y    + L    N +RA +++   VSS                 + GR+ E F +V EM+
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G      T N ++   C+    E A E+ + + + G   D  +Y ++V   C+ GR+ 
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +A + +  ML RG      T T L+   C  G    + +A  + +EMV K    +   + 
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTG---RVDEAHHIFKEMVSKDCTADALAYV 510

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            L++G CK   T++A     K+V      P +  Y A++ GYCKE +++    + E M  
Sbjct: 511 SLVNGYCKSSRTKEA----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 566

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G +PN  TY  ++ G CK G  + A+  ++ M   GC P++ +YN IIDGL K  + +E
Sbjct: 567 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 626

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A ++L +  Q  +  D +TY  L+++  K+     A+G+   M+KAG++PD   Y TLI+
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 686

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTK-ETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              +  ++ ++ +   E +  G   +   TY ++I    ++G +  A+     M   G  
Sbjct: 687 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATAM 597
            + +TY   I  LCK+ +LDEA      M        EV+  T+    CK  Q D A+ +
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKL 803

Query: 598 IILESLDKKLWI--RTVNTLIRKLCSEKRVGMA 628
                  K L I   T N LI      KR+  A
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 238/503 (47%), Gaps = 56/503 (11%)

Query: 150 ERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV 194
           E+A+E+++ +VSS                 + GRL +   MV  M   G      T   +
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 477

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-------- 246
           +   C  G V+ A  +F EM ++   ADA +Y  +V  YC+  R  EA + +        
Sbjct: 478 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 537

Query: 247 ----SAMLD--------------------RGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
               +A++D                    RG + +  T  +++   C     G + +AF 
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAFP 594

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
            LE M   G  P+V ++ ++IDGL K    ++A ++  +++++    P+  TY  +++ +
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQF 653

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CKEE+ + A  +L+ M + G+ P+  TY +LI G  +      AY+LM  M + GC  + 
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 713

Query: 403 -YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YN IID LCK+G +++A  L+       ++A+ +TY I +    K+    +A  L  
Sbjct: 714 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 773

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-GLFPTKETYTSMICGYLRD 520
            M    L  ++ +YTT+I   C+ +++  + K  +E +   GL  T  T+  +I  + + 
Sbjct: 774 EM--DTLRDEV-SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 830

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  A+     M Q GC+P  ITY  +I+ LCK  K+D+A + ++ M  +GI    V+ 
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890

Query: 581 VTLAYEYCKQGDSATAMIILESL 603
             L Y  C QG    A+ +LE +
Sbjct: 891 TVLIYGLCGQGRGKEALQVLEEM 913



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 9/315 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  + KE   ++ +M   G+P    T N ++   C+    + A  +   M   G
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSI 277
           V  D  +Y  ++    +  R+ +A   +  ML  G ++    T   +I   C +G    +
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG---CL 730

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           KQA  L++ M   G + N  T+ + ID LCK+G  ++A  L  ++   D  +  V +YT 
Sbjct: 731 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEV-SYTT 786

Query: 338 MISGYCKEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +I G CK E+++RA  L   M   +GL   ++T+  LI    K    + A  L+ LM + 
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC+P++  YN +I  LCK  +V +A+EL  +   R + A  ++YT+L+     Q   K+A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906

Query: 457 LGLFCRMVKAGLNPD 471
           L +   M  +    D
Sbjct: 907 LQVLEEMASSDCEID 921



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 113/295 (38%), Gaps = 46/295 (15%)

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK----------AFQRELQADK 437
           D++DL+G      NI        G  +   V    + LK           A  R  +   
Sbjct: 66  DVLDLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHST 125

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T    L   L+   + +   +F RM+ AG  PD + Y  +I + C+  ++ ++     +
Sbjct: 126 FTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDK 185

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G  P    YT +   + + G +  A++ F+ +     +PD I Y A+I G C+++ 
Sbjct: 186 AKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKND 241

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            D A +F + M  + ++P                                 + T N LI 
Sbjct: 242 CDGALEFLKEMNERKVAP--------------------------------DVFTYNILID 269

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            LC   +   A+   H+++ +    D V+  ++ +   ++ K+     L   +AE
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 211/402 (52%), Gaps = 9/402 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +  L+I A C  G    + +A E+  EM  +  +P+V+T+  L+DGLCK+   ++A  L 
Sbjct: 190 SFNLVIKAMCKLGL---VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV-LL 245

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++ +   P+  T+  +I+G CK+  M R   L++ M  +G +PN  TY ++I G C 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L+D M    C PN   Y  +I+GL K+GR  +   LL    +R   A++  
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ ++++A+GL+ +MV+ G  P+I  Y+ LI   CR+ K+ E+++   E +
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   TY+S+I G+ + GN   A++ ++ M +  C P+ I Y  LI GLC+  KL 
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNT 614
           EA   +  M+G+G+ P  V   ++ +  C  G     + +   +     D +  + T N 
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
           L+R LC +  +  A    + +L +  N D ++     NA  E
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 587



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 219/466 (46%), Gaps = 24/466 (5%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+  F   +   + R  +R +      +I  G F RA E  +C V     I         
Sbjct: 134 AIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS-------- 185

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
                    P + S  N V+   C+LGLV+ A EVF EM  +    D  +Y  ++   C+
Sbjct: 186 ---------PNVLS-FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK 235

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
             R+ EA   L  M   G    + T  +LI   C K   G + +  +L++ M  KG  PN
Sbjct: 236 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK---GDMVRVTKLVDNMFLKGCVPN 292

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
             T+  +I+GLC KG  +KA  L  ++V S    PN  TY  +I+G  K+ +      LL
Sbjct: 293 EVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGRSVDGVHLL 351

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             ++E+G   N   Y++LI G  K    E A  L   M ++GC PNI  Y+A+IDGLC++
Sbjct: 352 SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCRE 411

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G++ EA E+L +   +    +  TY+ L+    K   +++A+ ++  M K    P+   Y
Sbjct: 412 GKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICY 471

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-- 533
           + LI   C   K++E+   +   +  GL P    Y+SMI G    G++   +K F  M  
Sbjct: 472 SVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC 531

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            +    PD +TY  L+  LCKQ+ +  A     SM+ +G +P  +T
Sbjct: 532 QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 184/378 (48%), Gaps = 5/378 (1%)

Query: 278 KQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLF-LKLVRSDNYKPNVHTY 335
           ++A EL   MV +   +  V +   +++ + ++G   +A   +   +    N  PNV ++
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CK   ++RA  +   M  Q   P+  TY +L+ G CK    + A  L+D M  
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EGC P+   +N +I+GLCKKG +    +L+   F +    +++TY  +++    + +  +
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ L  RMV +   P+   Y TLI    +Q +  +           G    +  Y+++I 
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  ++     A+  +++M + GC P+ + Y ALI GLC++ KLDEA +    M+ KG +P
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 431

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFF 632
              T  +L   + K G+S  A+ + + + K   +      + LI  LC + ++  A + +
Sbjct: 432 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491

Query: 633 HKLLGKDQNVDRVSLAAL 650
             +LG+    D V+ +++
Sbjct: 492 THMLGRGLRPDVVAYSSM 509



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 3/283 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +YK    T+ ++I  Y           + +RMK +  +     +  +   + K    E+A
Sbjct: 75  SYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKA 134

Query: 387 YDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF--QRELQADKITYTIL 443
            +L   M  E  C   + ++N++++ + ++G    A E  +     +  +  + +++ ++
Sbjct: 135 IELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLV 194

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K     +A+ +F  M      PD+  Y TL+   C++ ++ E+     E    G 
Sbjct: 195 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 254

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           FP+  T+  +I G  + G++    K    M   GC P+ +TY  +I+GLC + KLD+A  
Sbjct: 255 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVS 314

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             + M+     P +VT  TL     KQG S   + +L SL+++
Sbjct: 315 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 157/384 (40%), Gaps = 39/384 (10%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           ++T   LI  + + G  G++ Q F+ ++   R   + N     ++     K    EKA  
Sbjct: 80  DSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKN---FILVFRAYGKAHLPEKAIE 136

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LF ++V     +  V ++ ++++   +E   +RA                     L +  
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA---------------------LEFYE 175

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C VG            GK   +PN+ ++N +I  +CK G V  A E+ ++   ++ + D 
Sbjct: 176 CGVG------------GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV 223

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+    K+    +A+ L   M   G  P    +  LI   C++  M    K    
Sbjct: 224 FTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDN 283

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G  P + TY ++I G    G +  AV    RM    C P+++TYG LI+GL KQ +
Sbjct: 284 MFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 343

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNT 614
             +      S+  +G    E    TL     K+  S  AM + + + +K     I   + 
Sbjct: 344 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSA 403

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK 638
           LI  LC E ++  A     +++ K
Sbjct: 404 LIDGLCREGKLDEAKEILCEMVNK 427



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 148/370 (40%), Gaps = 86/370 (23%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G ++ A  + D M A     +  +Y  ++    + GR  +    LS++
Sbjct: 295 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 354

Query: 250 LDRGAILDNATLTLLITAF----------------CDKGFR----------------GSI 277
            +RG   +    + LI+                   +KG +                G +
Sbjct: 355 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 414

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L EMV KG  PN +T++ LI G  K G ++KA R++ ++ + +N  PN   Y+ 
Sbjct: 415 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK-NNCVPNEICYSV 473

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE------------- 384
           +I G C++ K+  A M+   M  +GL P+   Y+S+I+G C  G+ E             
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533

Query: 385 ------------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK-GRVQ 419
                                    A DL++ M   GC P++   N  ++ L +K    Q
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQ 593

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +  E L +   R  +  +I     + E                M++  L P+   +  +I
Sbjct: 594 DGREFLDELVVRLHKRQRIVGAAKIIE---------------VMLQKFLPPNASTWERII 638

Query: 480 AAFCRQKKMK 489
              C+ KK++
Sbjct: 639 PELCKPKKVQ 648


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 264/550 (48%), Gaps = 58/550 (10%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  +G+ L   + N ++   C  G +E     F+EM       +  +Y  ++ AYC++ 
Sbjct: 193 EMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLK 252

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ EA + L +M   G   +  T  ++I   C  G    I++   +L EM RKG+ P+  
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVG---RIEETSGVLAEMDRKGFAPDGV 309

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  L++G CK G   +A  L  +++R +   P+V TYT++I+  CK   +NRA    ++
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLR-NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL PN  TYTSLI G  + G  + AY + D M + G  P I  YNA+++G C  GR
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++EA  LL+    + L  D ++Y+ +++   +  E  +A  +   MV+ G++PD   Y++
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C Q+++ E+   FQE +   L P + TYTS+I GY ++G+++ A+     M + G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 538 CAPDNITYGALISGLCKQSK---------------------------------------- 557
             PD +TY  LI+GL KQ++                                        
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVA 608

Query: 558 ----------LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
                     ++EA Q +ESMI +   P E     + + +C+ G+   A  + + +    
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD-RVSLAALKNACYESNKYALF 663
           +I    T+  L++ L SE       L    +L   +  D  +S A ++    E N  A+F
Sbjct: 669 FIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVF 728

Query: 664 SDLSQRIAEG 673
           + L++   +G
Sbjct: 729 NLLTEMAKDG 738



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 232/471 (49%), Gaps = 8/471 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR-VTEADRWL 246
           ++  + VV     L  +E A  + D     G      SY  ++ +  R  + V  A++  
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M+  G  L+  +  +LI  FC  G   +++      EEM R    PNV T+  +I   
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAG---NLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK    ++AF+L L+ +  +  +PN+ TY  +I+G C+  ++     +L  M  +G  P+
Sbjct: 249 CKLKRIDEAFKL-LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY +L+ G+CKVGNF +A  L   M + G  P++  Y ++I+ +CK G +  A E   
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +   R L+ + +TYT L++   ++    +A  ++  M+++G  P I  Y  L+   C   
Sbjct: 368 QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG 427

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +M+E+    +     GL P   +Y+++I G+ R   +  A +    M + G +PD ITY 
Sbjct: 428 RMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYS 487

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           +LI GLC+Q +L+EAC  ++ M+ K + P E T  +L   YCK+GD   A+ + + + KK
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKK 547

Query: 607 LWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            ++    T N LI  L  + R   A     KL   +   + ++   L  +C
Sbjct: 548 GFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESC 598



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 222/452 (49%), Gaps = 55/452 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++ R+ E F ++  M   GL     T N V+   C +G +E    V  EM  +G
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V  YC++G   +A    S ML  G   D  T T LI   C  G   ++ 
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG---NLN 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E  ++M  +G +PN  T+T LI+G  +KG+ ++A+R++ +++RS  + P + TY A+
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS-GFPPTIVTYNAL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G+C   +M  A  LL  M+ +GL P+  +Y+++I G C+    +RA+ +   M ++G 
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P+   Y+++I GLC++ R+ EA +L ++   + L  D+ TYT L++ + K+ +  +AL 
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK-----FFQEAITAGLF--------- 504
           L   M+K G  PD   Y  LI    +Q + +E+++     F+ E+I  G+          
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCS 599

Query: 505 ------------------------------------PTKETYTSMICGYLRDGNISSAVK 528
                                               P +  Y  +I G+ RDGN+  A K
Sbjct: 600 DIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHK 659

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            ++ M   G  P  +T  AL+  L  +  +DE
Sbjct: 660 LYKEMVDFGFIPHTVTIIALVKALYSEG-MDE 690



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 210/503 (41%), Gaps = 53/503 (10%)

Query: 3   SFHVLRSHGLRGKPSRTPSLTLF--VIRSLCYQ---THHHNFLANSKQPAFSSTSSSPSP 57
           +F +LRS GL G     P+L  +  VI  LC           LA   +  F+    + + 
Sbjct: 257 AFKLLRSMGLEG---LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN- 312

Query: 58  PQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVAL 117
             +LV   C   + +++Q   L S   R  L  D+  +T+   I  +     +AG++   
Sbjct: 313 --TLVNGYCK--VGNFHQALVLHSEMLRNGLPPDV--VTYTSLINTMC----KAGNLNRA 362

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV-SSFAEI---------- 166
             F+  +     R     Y          G  + A+ +   M+ S F             
Sbjct: 363 MEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422

Query: 167 ----GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
               GR++E   ++  M   GL     + + ++   C    ++ A ++  EM  +GV  D
Sbjct: 423 HCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPD 482

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           A +Y  ++   C   R+ EA      ML++  + D  T T LI  +C +G    + +A  
Sbjct: 483 AITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG---DLNEALN 539

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY------- 335
           L +EM++KG+ P+  T+ VLI+GL K+  T +A RL LKL   D   PN  TY       
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFY-DESIPNGITYDTLIESC 598

Query: 336 --------TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
                    A+I G+C +  MN A+ + E M ++   PN   Y  +I+GHC+ GN  +A+
Sbjct: 599 SDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAH 658

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L   M   G  P+     A++  L  +G  ++   +++   +    +D      L+  +
Sbjct: 659 KLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQIN 718

Query: 448 LKQAETKQALGLFCRMVKAGLNP 470
            K+        L   M K G  P
Sbjct: 719 HKEGNIDAVFNLLTEMAKDGFLP 741


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 215/440 (48%), Gaps = 16/440 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +  A  + D M   G+     +Y  +V   C+ G    A   L  M +   I+ N
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 259 ATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             + + +I + C  G R S  Q   L  EM  KG  P+++T+  +I G C  G    A +
Sbjct: 255 VVIYSAIIDSLCKDG-RHSDAQ--NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +++      P+V TY A+I+ + KE K   AE L + M  +G++PNT TY+S+I G 
Sbjct: 312 LLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A  +  LM  +GC+PN+  +N +IDG C   R+ +  ELL +  +  L AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+       +   AL L   M+ +GL PDI    TL+   C   K+K++ + F+ 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 498 AITA-----------GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
              +           G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 607 LWIRTVNTLIRKLCSEKRVG 626
             +    T I  +C  ++VG
Sbjct: 611 GIVANAITYITLICGFRKVG 630



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T++ +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    PN+ T+  +I GYC  ++++    LL  M E GL+ +T TY +L
Sbjct: 378 AAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQR 431
           I+G   VG+   A DL+  M   G  P+I   + ++DGLC  G++++A E+ K  +  ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 432 ELQA---------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L A         D  TY IL+S  + + +  +A  L+  M   G+ PD   Y+++I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q ++ E+ + F    +    P   T+T++I GY + G +   ++ F  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ITY  LI G  K   ++ A   ++ MI  G+ P  +T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 230/498 (46%), Gaps = 21/498 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C    + +A   F ++   G+  D  ++  ++   C   RV+EA  +   M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +     +  T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CKK
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G T  A  L  K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y S+I G C  G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R +  + ITY+ ++    KQ     A  +F  M   G +P++  + TLI  +C  K++ 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +  +   E    GL     TY ++I G+   G++++A+   Q M   G  PD +T   L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 550 SGLCKQSKLDEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMI 598
            GLC   KL +A + ++ M              G+ P   T   L      +G    A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 599 ILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + E +  +  +    T +++I  LC + R+  A   F  +  K  + + V+   L N   
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 656 ESNKY----ALFSDLSQR 669
           ++ +      LF ++ +R
Sbjct: 593 KAGRVDDGLELFCEMGRR 610



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 186/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++  +I  +C   K+  A     ++ + GL P+  T+T+L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A D    M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K+ +T  AL L  +M +   + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI   C  KR+       H++
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T + ++   C+   ++ AE +F  M  +G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  YC   R+ +    L  M + G + D  T   LI  F      G + 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +PN+  +  +I+G CK GRV +  EL  +  +R + A+ ITY  L+    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           K      AL +F  M+ +G+ PD      ++     ++++K +
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++ IL+      ++   AL  F ++ K GL+PD+  +TTL+   C + ++ E+  FF
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 215/440 (48%), Gaps = 16/440 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +  A  + D M   G+     +Y  +V   C+ G    A   L  M +   I+ N
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 259 ATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             + + +I + C  G R S  Q   L  EM  KG  P+++T+  +I G C  G    A +
Sbjct: 255 VVIYSAIIDSLCKDG-RHSDAQ--NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +++      P+V TY A+I+ + KE K   AE L + M  +G++PNT TY+S+I G 
Sbjct: 312 LLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A  +  LM  +GC+PN+  +N +IDG C   R+ +  ELL +  +  L AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+       +   AL L   M+ +GL PDI    TL+   C   K+K++ + F+ 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 498 AITA-----------GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
              +           G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 607 LWIRTVNTLIRKLCSEKRVG 626
             +    T I  +C  ++VG
Sbjct: 611 GIVANAITYITLICGFRKVG 630



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T++ +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    PN+ T+  +I GYC  ++++    LL  M E GL+ +T TY +L
Sbjct: 378 AAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQR 431
           I+G   VG+   A DL+  M   G  P+I   + ++DGLC  G++++A E+ K  +  ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 432 ELQA---------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L A         D  TY IL+S  + + +  +A  L+  M   G+ PD   Y+++I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q ++ E+ + F    +    P   T+T++I GY + G +   ++ F  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ITY  LI G  K   ++ A   ++ MI  G+ P  +T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 225/489 (46%), Gaps = 21/489 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G+  D  ++  ++   C   RV+EA      M +     + 
Sbjct: 125 CSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CKKG T  A  L
Sbjct: 185 VTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  TY S+I G C
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +   R +  + I
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY+ ++    KQ     A  +F  M   G +P++  + TLI  +C  K++ +  +   E 
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TY ++I G+   G++++A+   Q M   G  PD +T   L+ GLC   KL
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + ++ M              G+ P   T   L      +G    A  + E +  + 
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY---- 660
            +    T +++I  LC + R+  A   F  +  K  + + V+   L N   ++ +     
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 661 ALFSDLSQR 669
            LF ++ +R
Sbjct: 602 ELFCEMGRR 610



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++T +I  +C   K+  A     ++ + GL P+  T+ +L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A +L   M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K+ +T  AL L  +M +   + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI   C  KR+       H++
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T + ++   C+   ++ AE +F  M  +G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  YC   R+ +    L  M + G + D  T   LI  F      G + 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +PN+  +  +I+G CK GRV +  EL  +  +R + A+ ITY  L+    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           K      AL +F  M+ +G+ PD      ++     ++++K +
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++TIL+      ++   AL  F ++ K GL+PD+  + TL+   C + ++ E+   F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 212/413 (51%), Gaps = 7/413 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+ +D     +++  + ++G+   +   L+ +L  G   +  TLT LI   C   
Sbjct: 97  QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLC--- 153

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I QA +  +++V  G+  N  ++  LI+GLCK G T  A +L L+ V     +PNV
Sbjct: 154 LKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL-LRRVDGKLVQPNV 212

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK + +N A  L   M  +G+ P+  TY +LI G C VG  + A DL + 
Sbjct: 213 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNK 272

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  E   PN+Y +N ++DG CK+ R++EA  +L    ++ ++ D  TY  L+  +    E
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE 332

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +F  + + G+NP+IH+Y+ +I  FC+ KK+ E+   F+E     + P   TY S
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G IS A+K    M+  G   D ITY +++  LCK  ++D+A      M  +G
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSE 622
           I P   T  TL    CK G    A I+ E L  K +I  VN    +I+  CS 
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSH 505



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 223/454 (49%), Gaps = 39/454 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +++ F+++G+    FS++ ++   G      TL  ++   C  G +  A +  D++
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 215 CARGVCADASSYKLMVVAYCRMGR-----------------------------------V 239
            A G   +  SY  ++   C++G+                                   V
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            EA    S M+ +G   D  T   LI+ FC     G +K A +L  +M+ +   PNVYT 
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFC---IVGKMKDATDLFNKMIFENINPNVYTF 285

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            +L+DG CK+   ++A +  L ++     KP+V TY +++  YC  +++N+A+ +   + 
Sbjct: 286 NILVDGFCKERRLKEA-KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           ++G+ PN ++Y+ +I+G CK+   + A +L   M      P++  YN++IDGLCK G++ 
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A +L+ +   R +  DKITY  +L    K  +  +A+ L  +M   G+ PDI  YTTL+
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C+  +++++   F++ +  G       YT+MI G+   G    ++    +M + GC 
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           P+ +TY  +I  L  + + D+A +    MI +G+
Sbjct: 525 PNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 183/360 (50%), Gaps = 5/360 (1%)

Query: 146 NGNFERAHEVM-QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           +G   + + VM   ++ S  ++  + E F +  EM + G+     T N ++   C +G +
Sbjct: 204 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKM 263

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A ++F++M    +  +  ++ ++V  +C+  R+ EA   L+ M+ +G   D  T   L
Sbjct: 264 KDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSL 323

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  +C       + +A  +   + ++G  PN+++++++I G CK    ++A  LF K + 
Sbjct: 324 MDRYC---LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF-KEMH 379

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            +N  P+V TY ++I G CK  K++ A  L++ M ++G+  +  TY S++   CK    +
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVD 439

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +A  L+  M  EG  P+I  Y  ++DGLCK GR+++A  + +    +    D   YT ++
Sbjct: 440 KAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                     ++L L  +M + G  P+   Y  +I +   + +  ++EK  +E IT GLF
Sbjct: 500 QGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 3/320 (0%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +L+   N KP++  +  ++    K    +    L  +M+  G+  +    + LI    
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G    ++ ++  + K G  PN+     +I GLC KG++ +A +   K        +K+
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +Y  L++   K  +T  AL L  R+    + P++  Y T+I + C+ K + E+   + E 
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           ++ G+ P   TY ++I G+   G +  A   F +M      P+  T+  L+ G CK+ +L
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTL 615
            EA      M+ +GI P   T  +L   YC   +   A  I  ++ ++     I + + +
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 616 IRKLCSEKRVGMAALFFHKL 635
           I   C  K+V  A   F ++
Sbjct: 359 IHGFCKIKKVDEAMNLFKEM 378



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           ++G  P+ IT   LI GLC + ++ +A QF++ ++  G    +V+  TL    CK G ++
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194

Query: 595 TAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            A+ +L  +D KL    V   NT+I  +C  K V  A   + +++ K  + D V+  AL
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNAL 253


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 215/440 (48%), Gaps = 16/440 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +  A  + D M   G+     +Y  +V   C+ G    A   L  M +   I+ N
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 259 ATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             + + +I + C  G R S  Q   L  EM  KG  P+++T+  +I G C  G    A +
Sbjct: 255 VVIYSAIIDSLCKDG-RHSDAQ--NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +++      P+V TY A+I+ + KE K   AE L + M  +G++PNT TY+S+I G 
Sbjct: 312 LLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A  +  LM  +GC+PN+  +N +IDG C   R+ +  ELL +  +  L AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+       +   AL L   M+ +GL PDI    TL+   C   K+K++ + F+ 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 498 AITA-----------GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
              +           G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 607 LWIRTVNTLIRKLCSEKRVG 626
             +    T I  +C  ++VG
Sbjct: 611 GIVANAITYITLICGFRKVG 630



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T++ +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    PN+ T+  +I GYC  ++++    LL  M E GL+ +T TY +L
Sbjct: 378 AAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQR 431
           I+G   VG+   A DL+  M   G  P+I   + ++DGLC  G++++A E+ K  +  ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 432 ELQA---------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L A         D  TY IL+S  + + +  +A  L+  M   G+ PD   Y+++I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q ++ E+ + F    +    P   T+T++I GY + G +   ++ F  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ITY  LI G  K   ++ A   ++ MI  G+ P  +T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 225/489 (46%), Gaps = 21/489 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G+  D  ++  ++   C   RV+EA      M +     + 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CKKG T  A  L
Sbjct: 185 VTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  TY S+I G C
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +   R +  + I
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY+ ++    KQ     A  +F  M   G +P++  + TLI  +C  K++ +  +   E 
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TY ++I G+   G++++A+   Q M   G  PD +T   L+ GLC   KL
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + ++ M              G+ P   T   L      +G    A  + E +  + 
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY---- 660
            +    T +++I  LC + R+  A   F  +  K  + + V+   L N   ++ +     
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 661 ALFSDLSQR 669
            LF ++ +R
Sbjct: 602 ELFCEMGRR 610



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++T +I  +C   K+  A     ++ + GL P+  T+ +L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A +L   M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K+ +T  AL L  +M +   + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI   C  KR+       H++
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T + ++   C+   ++ AE +F  M  +G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  YC   R+ +    L  M + G + D  T   LI  F      G + 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +PN+  +  +I+G CK GRV +  EL  +  +R + A+ ITY  L+    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           K      AL +F  M+ +G+ PD      ++     ++++K +
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++TIL+      ++   AL  F ++ K GL+PD+  + TL+   C + ++ E+   F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 215/440 (48%), Gaps = 16/440 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +  A  + D M   G+     +Y  +V   C+ G    A   L  M +   I+ N
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPN 254

Query: 259 ATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             + + +I + C  G R S  Q   L  EM  KG  P+++T+  +I G C  G    A +
Sbjct: 255 VVIYSAIIDSLCKDG-RHSDAQ--NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +++      P+V TY A+I+ + KE K   AE L + M  +G++PNT TY+S+I G 
Sbjct: 312 LLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A  +  LM  +GC+PN+  +N +IDG C   R+ +  ELL +  +  L AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+       +   AL L   M+ +GL PDI    TL+   C   K+K++ + F+ 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 498 AITA-----------GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
              +           G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 607 LWIRTVNTLIRKLCSEKRVG 626
             +    T I  +C  ++VG
Sbjct: 611 GIVANAITYITLICGFRKVG 630



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T++ +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    PN+ T+  +I GYC  ++++    LL  M E GL+ +T TY +L
Sbjct: 378 AAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQR 431
           I+G   VG+   A DL+  M   G  P+I   + ++DGLC  G++++A E+ K  +  ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 432 ELQA---------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L A         D  TY IL+S  + + +  +A  L+  M   G+ PD   Y+++I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+Q ++ E+ + F    +    P   T+T++I GY + G +   ++ F  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ITY  LI G  K   ++ A   ++ MI  G+ P  +T
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 229/498 (45%), Gaps = 21/498 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C    + +A   F ++   G+  D  ++  ++   C   RV+EA      M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +     +  T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CKK
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G T  A  L  K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y S+I G C  G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R +  + ITY+ ++    KQ     A  +F  M   G +P++  + TLI  +C  K++ 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +  +   E    GL     TY ++I G+   G++++A+   Q M   G  PD +T   L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 550 SGLCKQSKLDEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMI 598
            GLC   KL +A + ++ M              G+ P   T   L      +G    A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 599 ILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + E +  +  +    T +++I  LC + R+  A   F  +  K  + + V+   L N   
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 656 ESNKY----ALFSDLSQR 669
           ++ +      LF ++ +R
Sbjct: 593 KAGRVDDGLELFCEMGRR 610



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++  +I  +C   K+  A     ++ + GL P+  T+T+L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A +L   M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K+ +T  AL L  +M +   + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI   C  KR+       H++
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T + ++   C+   ++ AE +F  M  +G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  YC   R+ +    L  M + G + D  T   LI  F      G + 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +ISG   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +PN+  +  +I+G CK GRV +  EL  +  +R + A+ ITY  L+    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           K      AL +F  M+ +G+ PD      ++     ++++K +
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++ IL+      ++   AL  F ++ K GL+PD+  +TTL+   C + ++ E+   F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 227/450 (50%), Gaps = 5/450 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ SF + G ++E   ++ +M   G      T N +V      G +E A+E+  +M   G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++  YC  G++ EA R    ML RGA+    T   ++   C     G + 
Sbjct: 268 LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK---WGRVS 324

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL+ MV K   P++ ++  LI G  + G   +AF LF +L R  +  P+V TY  +
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL-RYRSLAPSVVTYNTL 383

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+   ++ A  L + M + G  P+  T+T+ + G CK+GN   A +L D M   G 
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +AY   I G  K G   +A+ + ++   R    D ITY + +    K    K+A  
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 503

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  GL PD   YT++I A      ++++   F E ++ G+FP+  TYT +I  Y 
Sbjct: 504 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYA 563

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A+ +F  M++ G  P+ ITY ALI+GLCK  K+D+A  F+  M  KGISP + 
Sbjct: 564 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKY 623

Query: 579 TRVTLAYEYCKQGDSATAMIILES-LDKKL 607
           T   L  E C  G    A+ + +  LD+++
Sbjct: 624 TYTILINENCNLGHWQEALRLYKDMLDREI 653



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 273/569 (47%), Gaps = 20/569 (3%)

Query: 114 MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGF 173
           +VAL FF WA     F+     Y V    L  NG    A+ VM+ +VS      +++ G 
Sbjct: 62  VVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSV-----KMENGV 116

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS-YKLMVVA 232
             V+  +   +P +   L+ ++ I  +  L+E    VF +M ++G+  D  +  +++ + 
Sbjct: 117 IDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLL 176

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
             R   +  A    + M++ G      T   ++ +FC KG    +++A +LL +M   G 
Sbjct: 177 RDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGM---VQEALQLLFQMQAMGC 233

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PN  T+ VL++GL   G  E+A  L   ++R    + +V+TY  +I GYC++ ++  A 
Sbjct: 234 SPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRL-GLEVSVYTYDPLIRGYCEKGQIEEAS 292

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L E M  +G +P   TY +++YG CK G    A  L+D+M  +   P++ +YN +I G 
Sbjct: 293 RLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 352

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            + G + EA+ L  +   R L    +TY  L+    +  +   A+ L   M+K G +PD+
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +TT +  FC+   +  +++ F E +  GL P +  Y + I G L+ G+ S A    + 
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G  PD ITY   I GL K   L EA +  + M+  G+ P  VT  ++ + +   G 
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 593 SATA-MIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A  + LE L K ++  + T   LI       R+ +A L F ++  K  + + ++  A
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 650 LKNACYESNK----YALFSDLSQRIAEGI 674
           L N   +  K    Y  F+++    A+GI
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQ---AKGI 618



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 216/427 (50%), Gaps = 4/427 (0%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             +V+  +  G +++   ++ +M   GL +   T + ++   CE G +E A  + +EM +
Sbjct: 241 NVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y  ++   C+ GRV++A + L  M+++  + D  +   LI  +      G+
Sbjct: 301 RGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR---LGN 357

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +AF L  E+  +   P+V T+  LIDGLC+ G  + A RL  ++++     P+V T+T
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP-DPDVFTFT 416

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             + G+CK   +  A+ L + M  +GL P+   Y + I G  K+G+  +A+ + + M   
Sbjct: 417 TFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN  IDGL K G ++EA EL+KK     L  D +TYT ++  HL     ++A
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  M+  G+ P +  YT LI ++  + ++K +   F E    G+ P   TY ++I G
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             +   +  A  +F  M   G +P+  TY  LI+  C      EA + Y+ M+ + I P 
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656

Query: 577 EVTRVTL 583
             T  +L
Sbjct: 657 SCTHRSL 663


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 211/410 (51%), Gaps = 4/410 (0%)

Query: 165  EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
            ++GR+KE   +++ M   G      + + VV   C  G ++   ++ + M  +G+  ++ 
Sbjct: 701  QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 760

Query: 225  SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
             Y  ++   CR+ ++ EA+   S M+ +G + D    T LI  FC    RG I+ A +  
Sbjct: 761  IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFF 817

Query: 285  EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             EM  +   P+V T+T +I G C+ G   +A +LF ++      +P+  T+T +I+GYCK
Sbjct: 818  YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCK 876

Query: 345  EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
               M  A  +   M + G  PN  TYT+LI G CK G+ + A +L+  M K G  PNI+ 
Sbjct: 877  AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 936

Query: 405  YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            YN+I++GLCK G ++EA +L+ +     L AD +TYT L+  + K  E  +A  +   M+
Sbjct: 937  YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996

Query: 465  KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
              GL P I  +  L+  FC    +++ EK     +  G+ P   T+ S++  Y    N+ 
Sbjct: 997  GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 1056

Query: 525  SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            +A   ++ M   G  PD  TY  L+ G CK   + EA   ++ M GKG S
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 241/498 (48%), Gaps = 7/498 (1%)

Query: 178  EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            E    G+    ++ N V+   C+LG ++ A  +   M  +G   D  SY  +V  YCR G
Sbjct: 679  EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738

Query: 238  RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
             + +  + +  M  +G   ++     +I   C       + +A E   EM+R+G  P+  
Sbjct: 739  ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---KLAEAEEAFSEMIRQGILPDTV 795

Query: 298  THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
             +T LIDG CK+G    A + F ++  S +  P+V TYTA+ISG+C+   M  A  L   
Sbjct: 796  VYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854

Query: 358  MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
            M  +GL P++ T+T LI G+CK G+ + A+ + + M + GC+PN+  Y  +IDGLCK+G 
Sbjct: 855  MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914

Query: 418  VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            +  A ELL + ++  LQ +  TY  +++   K    ++A+ L      AGLN D   YTT
Sbjct: 915  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974

Query: 478  LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            L+ A+C+  +M ++++  +E +  GL PT  T+  ++ G+   G +    K    M   G
Sbjct: 975  LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034

Query: 538  CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             AP+  T+ +L+   C ++ L  A   Y+ M  +G+ P   T   L   +CK  +   A 
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094

Query: 598  IILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             + + +  K   + + T + LI+     K+   A   F ++  +    D+       +  
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 1154

Query: 655  YESNKYALFSDLSQRIAE 672
            Y+  +     D    I E
Sbjct: 1155 YKGKRPDTIVDPIDEIIE 1172



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 207/416 (49%), Gaps = 4/416 (0%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +V+ +   G L + + ++  M   GL   +     ++G+ C +  +  AEE F EM  +G
Sbjct: 730  VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            +  D   Y  ++  +C+ G +  A ++   M  R    D  T T +I+ FC     G + 
Sbjct: 790  ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMV 846

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +A +L  EM  KG +P+  T T LI+G CK G  + AFR+   ++++    PNV TYT +
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTL 905

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G CKE  ++ A  LL  M + GL PN  TY S++ G CK GN E A  L+      G 
Sbjct: 906  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              +   Y  ++D  CK G + +A E+LK+   + LQ   +T+ +L++        +    
Sbjct: 966  NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            L   M+  G+ P+   + +L+  +C +  +K +   +++  + G+ P  +TY +++ G+ 
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 1085

Query: 519  RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            +  N+  A   FQ M   G +    TY  LI G  K+ K  EA + ++ M  +G++
Sbjct: 1086 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 1141



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 221  ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +D   + +        G + EA R    ML+ G +L   +  + +T      ++ +   A
Sbjct: 616  SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TA 673

Query: 281  FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
              +  E    G   NV ++ ++I  +C+ G  ++A  L L L+    Y P+V +Y+ +++
Sbjct: 674  IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVN 732

Query: 341  GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            GYC+  ++++   L+E MK +GL PN+  Y S+I   C++     A +    M ++G  P
Sbjct: 733  GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 401  NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
            +   Y  +IDG CK+G ++ A +   +   R++  D +TYT ++S   +  +  +A  LF
Sbjct: 793  DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 461  CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
              M   GL PD   +T LI  +C+   MK++ +     I AG  P   TYT++I G  ++
Sbjct: 853  HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 521  GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
            G++ SA +    M +IG  P+  TY ++++GLCK   ++EA +        G++   VT 
Sbjct: 913  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972

Query: 581  VTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             TL   YCK G+   A  IL E L K L   I T N L+   C    +       + +L 
Sbjct: 973  TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032

Query: 638  KDQNVDRVSLAAL-KNACYESN---KYALFSDLSQRIAEGIG 675
            K    +  +  +L K  C  +N     A++ D+  R   G+G
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---GVG 1071



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)

Query: 155  VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
            V   ++  F + G ++       EM +  +     T   ++   C++G +  A ++F EM
Sbjct: 796  VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 215  CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              +G+  D+ ++  ++  YC+ G + +A R  + M+  G   +  T T LI   C +   
Sbjct: 856  FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE--- 912

Query: 275  GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            G +  A ELL EM + G +PN++T+  +++GLCK G  E+A +L  +   +     +  T
Sbjct: 913  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVT 971

Query: 335  YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
            YT ++  YCK  +M++A+ +L+ M  +GL P   T+  L+ G C  G  E    L++ M 
Sbjct: 972  YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031

Query: 395  KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             +G  PN   +N+++   C +  ++ A  + K    R +  D  TY  L+  H K    K
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091

Query: 455  QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +A  LF  M   G +  +  Y+ LI  F ++KK  E+ + F +    GL   KE +
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 273/560 (48%), Gaps = 20/560 (3%)

Query: 38  NFLANSKQPAFSSTSSSPSPPQS-----LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDI 92
           NFL+ S +  F   S+  +PP S     ++ T+   +  S  +  H  SS  R+     +
Sbjct: 11  NFLS-SPRGGFLCFSTWMTPPTSHCHDPILTTISEAIKVSPTKPLH--SSLKRI-----L 62

Query: 93  DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            SLT    I ++    +       LSFF W      FR  +  Y      L ++     A
Sbjct: 63  PSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEA 122

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
             ++Q +VS   +       F+ V+E    G        + ++    + G    A + F 
Sbjct: 123 QSLLQFVVSRKGK-NSASSVFTSVLEA--RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +    +     S   +     ++   + A  +   +LD G   D     +L+   C + 
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I +A  L  E+ ++G +P V +   LI+G CK G  ++ FRL  + +  +   P+V
Sbjct: 240 ---KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDV 295

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY+ +I+G CKE +++ A  L   M ++GL+PN  T+T+LI GHC  G  +   ++   
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G  P++  YN +I+GLCK G ++EA +L+ +  QR L+ DK TYT+L+    K+ +
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + AL +   MVK G+  D  A+T LI+ FCR+ ++ E+E+  +E + AG+ P   TYT 
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ + G++ +  K  + M   G  P  +TY  L++GLCKQ ++  A    ++M+  G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 573 ISPCEVTRVTLAYEYCKQGD 592
           + P ++T   L   +CK G+
Sbjct: 536 VVPDDITYNILLEGHCKHGN 555



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 231/450 (51%), Gaps = 10/450 (2%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           +C   + ++A S    VV+  R G+ + +  + S +  RG    N   ++L+ A+ D G+
Sbjct: 113 LCTHKMLSEAQSLLQFVVS--RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGY 170

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                Q F L+    +   +   ++   L D L K   T  A+  + +++    Y P+V 
Sbjct: 171 FSDAIQCFRLVR---KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC-GYPPDVC 226

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +  ++   CKE K+N A++L   + ++GL P   ++ +LI G+CK GN ++ + L   M
Sbjct: 227 KFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM 286

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            +    P+++ Y+ +I+GLCK+G++ +A +L  +   R L  + +T+T L++ H      
Sbjct: 287 MENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA 346

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
              + ++ +M++ G+ PD+  Y TLI   C+   ++E++K   E    GL P K TYT +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  ++G++ SA++  + M + G   DN+ + ALISG C++ ++ EA +    M+  GI
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESL--DKKL-WIRTVNTLIRKLCSEKRVGMAAL 630
            P + T   + + +CK+GD  T   +L+ +  D  +  + T N L+  LC + ++  A +
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 631 FFHKLLGKDQNVDRVSLAA-LKNACYESNK 659
               +L      D ++    L+  C   N+
Sbjct: 527 LLDAMLNLGVVPDDITYNILLEGHCKHGNR 556



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 18/357 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++ E   +  E+   GL     + N ++   C+ G ++    +   M    V  D  +Y 
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++   C+ G++ +A++    M DRG + ++ T T LI   C     G      E+ ++M
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC---VTGRADLGMEIYQQM 356

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +RKG KP+V T+  LI+GLCK G   +A +L +++ +    KP+  TYT +I G CKE  
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEGD 415

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  + + M ++G+  +   +T+LI G C+ G    A   +  M + G  P+   Y  
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADK-----ITYTILLSEHLKQAETKQALGLFCR 462
           +I G CKKG V+  ++LLK     E+Q D      +TY +LL+   KQ + K A  L   
Sbjct: 476 VIHGFCKKGDVKTGFKLLK-----EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           M+  G+ PD   Y  L+   C+    ++ +K   E    GL     +YTS+I G LR
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLI-GDLR 583


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 262/548 (47%), Gaps = 44/548 (8%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDEMCARGVCA 221
             EIG L E   ++ ++ + GL +   + N  +  IA     +E A +VF   C  G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISW 256

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           + +SY +++ + CR+G+V EA R L  M  R +  D  + + +I  +C     G +K+A 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH---LGELKKAL 313

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT---EKAFRL-------------------F 319
           +L+++M  KG KPN YT+  +I  LCK G +   EK  R                    F
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 320 LKL--VRSDN----------YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            KL  VR+ N            P+  TYT +I G+ +  K+   + L   M  +GL P+ 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYT+LI  +CK G    A+ L + M + G TPNI  Y A+IDGLCK G +  A ELL +
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ LQ +   Y  +++   K    +QA+ L   M  AG++PD   YTT+I A+CR   
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + ++ K  QE +  GL PT  T+  ++ G+   G +    +    M + G  PD ITY  
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L+   C ++ ++   + Y+ M  +G++P   T   L   +CK  +   A  + + + +K 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 608 WIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFS 664
           ++ TV   N LI++   +K++  A   F ++ G     D        + CYE     +  
Sbjct: 674 YVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITL 733

Query: 665 DLSQRIAE 672
           +L     E
Sbjct: 734 NLCDEAIE 741



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 229/446 (51%), Gaps = 6/446 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S   +G++KE   ++++M          + + V+   C LG ++ A ++ D+M  +G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  +  +Y  +++  C++G+  EA++ L  M+ +  I DN   T LI  F    F+ G +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF----FKLGHV 379

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A +  +EM+ K   P+  T+T LI G  + G   +   LF +++ S   KP+  TYT 
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-SRGLKPDEVTYTT 438

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I  YCK  +M  A  L   M + G+ PN  TY +LI G CK G  + A +L+D M K+G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N+  YN++++G+CK G +++A +L+K+     +  D ITYT ++  + +  +  +A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+  GL P +  +  L+  FC    +++ ++     +  G+ P   TY +++  +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
               ++++  K ++RM   G APD+ TY  LI G CK   L EA   Y+ MI KG  P  
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
            +   L   + K+     A  + E +
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEM 704



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 208/465 (44%), Gaps = 54/465 (11%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +   SL   G  + AH ++  M               +  +  +G LK+   ++ +M 
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             GL     T N ++ + C++G    AE+V  EM ++ +  D   Y  ++  + ++G V 
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380

Query: 241 EADRWLSAMLD-----------------------------------RGAILDNATLTLLI 265
            A++W   ML                                    RG   D  T T LI
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             +C  G    +  AF L  EMV+ G  PN+ T+  LIDGLCK G  + A  L L  +R 
Sbjct: 441 DVYCKAG---EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL-LDEMRK 496

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              + NV  Y +M++G CK   + +A  L++ M+  G+ P+  TYT++I  +C++G+ ++
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A+ L+  M   G  P +  +N +++G C  G +++   LL    ++ +  D ITY  L+ 
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           +H  +        ++ RM   G+ PD + Y  LI   C+ + +KE+   ++E I  G  P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           T  +Y ++I  + +   I  A + F+ M   G   D   Y   + 
Sbjct: 677 TVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 4/273 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G L     ++ EM   GL L     N +V   C+ G +E A ++  EM   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y  ++ AYCR+G + +A + L  MLDRG      T  +L+  FC     G ++
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC---MLGMLE 590

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               LL  M+ KG  P+  T+  L+   C +       +++ K +R+    P+ +TY  +
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY-KRMRNQGVAPDSNTYNIL 649

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK   +  A  L + M E+G +P   +Y +LI    K      A +L + M   G 
Sbjct: 650 IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGL 709

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
             +   YN  +D   ++G V+    L  +A ++
Sbjct: 710 VADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 4/237 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   MV+   + G +++   ++ EM   G+     T   V+   C LG ++ A ++  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+     ++ +++  +C +G + + DR L  ML++G + D  T   L+   C    R
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC---IR 621

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            S+    ++ + M  +G  P+  T+ +LI G CK    ++A+ L+ +++    Y P V +
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-GYVPTVTS 680

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           Y A+I  + K++K+  A  L E M+  GL+ +   Y   +    + G+ E   +L D
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 202/384 (52%), Gaps = 4/384 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   CE G +E + ++  E+   G   +   Y  ++   C+ G + +A      M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFG 228

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            + +  T T+LI      G +   KQ FE+ E+M   G  PN+YT+  +++  CK G T+
Sbjct: 229 LVANEWTYTVLIHGLFKNGIK---KQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTK 285

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            AF+LF ++ R      N+ TY  +I G C+E K N A  ++++MK  G+ PN  TY +L
Sbjct: 286 DAFKLFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTL 344

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C VG   +A  L   +   G +P++  YN ++ G CKKG    A +++K+  +R +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +  KITYTIL+    +    ++A+ L   M + GL PD+H Y+ LI  FC + +M E+ +
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F+  +   L P K  Y +M+ GY ++G+   A++ F+ M +    P+  +Y  +I  LC
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 554 KQSKLDEACQFYESMIGKGISPCE 577
           K+ K  EA    E MI  GI P +
Sbjct: 525 KERKSKEAEGLVEKMIDTGIDPSD 548



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 206/392 (52%), Gaps = 11/392 (2%)

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           LD  +  ++I   C+ G    I+++F+LL E+   G+ PNV  +T LIDG CK+G  EKA
Sbjct: 161 LDVYSFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA 217

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             LF ++ +      N  TYT +I G  K     +   + E+M+E G+ PN  TY  ++ 
Sbjct: 218 KDLFFEMGKF-GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
            HCK G  + A+ L D M + G + NI  YN +I GLC++ +  EA +++ +     +  
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           + ITY  L+       +  +AL L CR +K+ GL+P +  Y  L++ FC++     + K 
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSL-CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            +E    G+ P+K TYT +I  + R  N+  A++    M ++G  PD  TY  LI G C 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           + +++EA + ++ M+ K + P +V   T+   YCK+G S  A+ +   +++K     V +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 615 ---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
              +I  LC E++   A     K++  D  +D
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMI--DTGID 545



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 4/304 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  K+GF M  +M  +G+     T N V+   C+ G  + A ++FDEM  RGV  +  +Y
Sbjct: 247 GIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTY 306

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR  +  EA++ +  M   G   +  T   LI  FC  G  G   +A  L  +
Sbjct: 307 NTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLG---KALSLCRD 363

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +  +G  P++ T+ +L+ G CKKG T  A ++ +K +     KP+  TYT +I  + + +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV-VKEMEERGIKPSKITYTILIDTFARMD 422

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M +A  L   M+E GL P+ +TY+ LI+G C  G    A  L  LM  +   PN   YN
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G CK+G    A  L ++  ++EL  +  +Y  ++    K+ ++K+A GL  +M+  
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542

Query: 467 GLNP 470
           G++P
Sbjct: 543 GIDP 546



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 141/271 (52%), Gaps = 4/271 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++   + GR K+ F +  EM   G+     T N ++G  C       A +V D+M +
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +Y  ++  +C +G++ +A      +  RG      T  +L++ FC K   G 
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKK---GD 388

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
              A ++++EM  +G KP+  T+T+LID   +    EKA +L   +       P+VHTY+
Sbjct: 389 TSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM-EELGLTPDVHTYS 447

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+C + +MN A  L + M  + L PN   Y +++ G+CK G+  RA  L   M ++
Sbjct: 448 VLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              PN+ +Y  +I+ LCK+ + +EA  L++K
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 133/297 (44%), Gaps = 39/297 (13%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  MI+ Y + + ++ +      M ++G +P +N + +L+       +F + +   +   
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN-ES 155

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K     ++Y++  +I G C+ G ++++++LL                             
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLL----------------------------- 186

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
                   + + G +P++  YTTLI   C++ ++++++  F E    GL   + TYT +I
Sbjct: 187 ------VELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  ++G      + +++M + G  P+  TY  +++  CK  +  +A + ++ M  +G+S
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVS 300

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
              VT  TL    C++  +  A  +++ +        + T NTLI   C   ++G A
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 211/402 (52%), Gaps = 9/402 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +  L+I A C  G    + +A E+  EM  +  +P+V+T+  L+DGLCK+   ++A  L 
Sbjct: 174 SFNLVIKAMCKLGL---VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV-LL 229

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++ +   P+  T+  +I+G CK+  M R   L++ M  +G +PN  TY ++I G C 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L+D M    C PN   Y  +I+GL K+GR  +   LL    +R   A++  
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ ++++A+GL+ +MV+ G  P+I  Y+ LI   CR+ K+ E+++   E +
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   TY+S+I G+ + GN   A++ ++ M +  C P+ I Y  LI GLC+  KL 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNT 614
           EA   +  M+G+G+ P  V   ++ +  C  G     + +   +     D +  + T N 
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
           L+R LC +  +  A    + +L +  N D ++     NA  E
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 571



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 219/466 (46%), Gaps = 24/466 (5%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+  F   +   + R  +R +      +I  G F RA E  +C V     I         
Sbjct: 118 AIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS-------- 169

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
                    P + S  N V+   C+LGLV+ A EVF EM  +    D  +Y  ++   C+
Sbjct: 170 ---------PNVLS-FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK 219

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
             R+ EA   L  M   G    + T  +LI   C K   G + +  +L++ M  KG  PN
Sbjct: 220 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK---GDMVRVTKLVDNMFLKGCVPN 276

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
             T+  +I+GLC KG  +KA  L  ++V S    PN  TY  +I+G  K+ +      LL
Sbjct: 277 EVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGRSVDGVHLL 335

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             ++E+G   N   Y++LI G  K    E A  L   M ++GC PNI  Y+A+IDGLC++
Sbjct: 336 SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCRE 395

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G++ EA E+L +   +    +  TY+ L+    K   +++A+ ++  M K    P+   Y
Sbjct: 396 GKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICY 455

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-- 533
           + LI   C   K++E+   +   +  GL P    Y+SMI G    G++   +K F  M  
Sbjct: 456 SVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC 515

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            +    PD +TY  L+  LCKQ+ +  A     SM+ +G +P  +T
Sbjct: 516 QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 184/378 (48%), Gaps = 5/378 (1%)

Query: 278 KQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLF-LKLVRSDNYKPNVHTY 335
           ++A EL   MV +   +  V +   +++ + ++G   +A   +   +    N  PNV ++
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CK   ++RA  +   M  Q   P+  TY +L+ G CK    + A  L+D M  
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EGC P+   +N +I+GLCKKG +    +L+   F +    +++TY  +++    + +  +
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 295

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ L  RMV +   P+   Y TLI    +Q +  +           G    +  Y+++I 
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 355

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  ++     A+  +++M + GC P+ + Y ALI GLC++ KLDEA +    M+ KG +P
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 415

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFF 632
              T  +L   + K G+S  A+ + + + K   +      + LI  LC + ++  A + +
Sbjct: 416 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475

Query: 633 HKLLGKDQNVDRVSLAAL 650
             +LG+    D V+ +++
Sbjct: 476 THMLGRGLRPDVVAYSSM 493



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 3/283 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +YK    T+ ++I  Y           + +RMK +  +     +  +   + K    E+A
Sbjct: 59  SYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKA 118

Query: 387 YDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF--QRELQADKITYTIL 443
            +L   M  E  C   + ++N++++ + ++G    A E  +     +  +  + +++ ++
Sbjct: 119 IELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLV 178

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K     +A+ +F  M      PD+  Y TL+   C++ ++ E+     E    G 
Sbjct: 179 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 238

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           FP+  T+  +I G  + G++    K    M   GC P+ +TY  +I+GLC + KLD+A  
Sbjct: 239 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVS 298

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             + M+     P +VT  TL     KQG S   + +L SL+++
Sbjct: 299 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 157/384 (40%), Gaps = 39/384 (10%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           ++T   LI  + + G  G++ Q F+ ++   R   + N     ++     K    EKA  
Sbjct: 64  DSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKN---FILVFRAYGKAHLPEKAIE 120

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LF ++V     +  V ++ ++++   +E   +RA                     L +  
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA---------------------LEFYE 159

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C VG            GK   +PN+ ++N +I  +CK G V  A E+ ++   ++ + D 
Sbjct: 160 CGVG------------GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV 207

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+    K+    +A+ L   M   G  P    +  LI   C++  M    K    
Sbjct: 208 FTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDN 267

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G  P + TY ++I G    G +  AV    RM    C P+++TYG LI+GL KQ +
Sbjct: 268 MFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 327

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNT 614
             +      S+  +G    E    TL     K+  S  AM + + + +K     I   + 
Sbjct: 328 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSA 387

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK 638
           LI  LC E ++  A     +++ K
Sbjct: 388 LIDGLCREGKLDEAKEILCEMVNK 411



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 57/311 (18%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG  A+  +Y  ++    +  +  EA      M+++G   +    + LI   C +G    
Sbjct: 341 RGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREG---K 397

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A E+L EMV KG  PN +T++ LI G  K G ++KA R++ ++ + +N  PN   Y+
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK-NNCVPNEICYS 456

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE------------ 384
            +I G C++ K+  A M+   M  +GL P+   Y+S+I+G C  G+ E            
Sbjct: 457 VLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQ 516

Query: 385 -------------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK-GRV 418
                                     A DL++ M   GC P++   N  ++ L +K    
Sbjct: 517 ESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPP 576

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           Q+  E L +   R  +  +I     + E                M++  L P+   +  +
Sbjct: 577 QDGREFLDELVVRLHKRQRIVGAAKIIE---------------VMLQKFLPPNASTWERI 621

Query: 479 IAAFCRQKKMK 489
           I   C+ KK++
Sbjct: 622 IPELCKPKKVQ 632


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 225/442 (50%), Gaps = 10/442 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G L+E  S+  EM + G      T N ++   C+   +  A E F EM   G
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A+C+ G +  A +    M   G + +  T T LI A C  G   ++ 
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAG---NLT 446

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW---TEKAFRLFLKLVRSDNYKPNVHTY 335
           +A++LL +M++ G K N+ T+T L+DGLCK G     E+ FR  LK    D   PN   Y
Sbjct: 447 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK----DGISPNQQVY 502

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           TA++ GY K E+M  A  +L++M E  + P+   Y S+I+GHC     E    +++ M  
Sbjct: 503 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 562

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G + N      IID   K G+  +A    ++     ++A  +TY +L+    K    + 
Sbjct: 563 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVEL 622

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+  FCRM+  GL P++  YT+LI   C+   ++ ++K F E    G+ P    +T++I 
Sbjct: 623 AVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID 682

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G L+ GN+  A+    RM ++    D   Y +L+SG  +  +L +A +F+  MI KGI P
Sbjct: 683 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 742

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
            EV  + L  EY K+G    A+
Sbjct: 743 EEVLCICLLREYYKRGQLDEAI 764



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 238/516 (46%), Gaps = 48/516 (9%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
           +AL FF WA     FRH    Y +    +     +  AH+ ++ ++ +     R+  GF 
Sbjct: 145 LALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMN----SRMDMGFP 200

Query: 175 M--VIEM---TNNGLPLITSTLNRVVGIACELGLVEYAEE-------------------- 209
           +  + +M   T N     +   + +  +  ELGL+E A E                    
Sbjct: 201 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 260

Query: 210 ---------------VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
                           F++M   G+     +Y +M+   C+ G +  + R    M + G 
Sbjct: 261 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 320

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D  T   LI  +   G  GS+++   L  EM   G  P++ T+  LI+  CK     +
Sbjct: 321 SPDVVTYNSLIDGY---GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           AF  F ++ +++  KPNV TY+ +I  +CKE  M  A  L   M+  GLLPN  TYTSLI
Sbjct: 378 AFEYFSEM-KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             +CK GN   A+ L++ M + G   NI  Y A++DGLCK GR+ EA E+ +   +  + 
Sbjct: 437 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            ++  YT L+  ++K    + A+ +  +M +  + PD+  Y ++I   C Q+K++E++  
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 556

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            +E  + G+       T++I  Y + G  S A+ +FQ M  +G     +TY  LI GLCK
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
              ++ A  ++  M+  G+ P      +L    CK 
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 199/421 (47%), Gaps = 39/421 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + +  ++   F    EM NNGL     T + ++   C+ G+++ A ++F +M   G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C+ G +TEA + L+ ML  G  L+  T T L+   C  G    + 
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG---RMI 481

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+   M++ G  PN   +T L+ G  K    E A ++ LK +   N KP++  Y ++
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI-LKQMTECNIKPDLILYGSI 540

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPN-------------------------------- 366
           I G+C + K+   +++LE MK +G+  N                                
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600

Query: 367 ---TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                TY  LI G CK G  E A D    M   G  PN+  Y ++IDGLCK   ++ A +
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK 660

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   R +  D   +T L+  +LK    ++AL L  RM +  +  D+H YT+L++ F 
Sbjct: 661 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 720

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ ++ KFF E I  G+ P +     ++  Y + G +  A++    M ++G   ++ 
Sbjct: 721 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESA 780

Query: 544 T 544
           T
Sbjct: 781 T 781



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 202/455 (44%), Gaps = 48/455 (10%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           +    +L + F + G    +++A E    M      P   +   L+  L K G  +   +
Sbjct: 219 SGVFDVLFSVFVELGL---LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 275

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            F  ++ +    P+V TY  MI   CKE  +  +  L  +M+E GL P+  TY SLI G+
Sbjct: 276 FFNDMIGA-GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNA------------------------------ 407
            KVG+ E    L + M   GC P+I  YN                               
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 408 -----IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
                +ID  CK+G +Q A +L     +  L  ++ TYT L+  + K     +A  L   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++AG+  +I  YT L+   C+  +M E+E+ F+  +  G+ P ++ YT+++ GY++   
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A+K  ++M +    PD I YG++I G C Q KL+E     E M  +GIS   V   T
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 583 LAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +   Y K G S+ A+   + +     +  I T   LI  LC    V +A  +F ++L   
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 640 QNVDRVSLAAL-----KNACYESNKYALFSDLSQR 669
              +     +L     KN C ES K  LF ++  R
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAK-KLFDEMQCR 668


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 221/449 (49%), Gaps = 4/449 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L E   +V EM  +G      T N ++   C+ G +E A   F  M   G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  ++   V A+C+ G V EA +  + M  RG  L+  T T LI   C  G    + 
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG---RLD 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EMVR+G   NV T+TVL+DGLCK+    +A  + L+++     + N   YT +
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV-LRMMEKAGVRANELLYTTL 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+   +   +A  LL  MK +GL  + + Y +LI G C V   + A  L+  M + G 
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++D   K G+V EA  +L+K      Q + ITY  L+    K     +A+ 
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M   GL+P++ AYT L+   C+   + E+ + F E +  G+   K  YT+++ GYL
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A     +M   G   D   Y   ISG C  + + EA + +  MIG GI+P   
Sbjct: 585 KQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKL 607
               L  +Y K G+   A+ + + +++ L
Sbjct: 645 VYNCLISKYQKLGNLEEAISLQDEMERVL 673



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 211/437 (48%), Gaps = 8/437 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  ++S  A+ G L +    V  +    +P  T T N ++              +F+++
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A  V     ++ +++   C+ G + EA    S M + G + D  T   LI  +   G  
Sbjct: 184 PAPNV----FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY---GKC 236

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  +L+EEM R G K +V T+  LI+  CK G  E A+  F  + R +    NV T
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVT 295

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++  +  +CKE  +  A  L  +M+ +G+  N  TYT LI G CK G  + A  L+D M 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   N+  Y  ++DGLCK+ +V EA ++L+   +  ++A+++ YT L+  H     ++
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +ALGL   M   GL  DI  Y  LI   C   K+ E++    +   +GL P    YT+M+
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G +  A+   Q++   G  P+ ITY ALI GLCK   +DEA   +  M   G+ 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 575 PCEVTRVTLAYEYCKQG 591
           P       L    CK G
Sbjct: 536 PNVQAYTALVDGLCKNG 552



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 196/415 (47%), Gaps = 17/415 (4%)

Query: 243 DRWLSAMLDRGAILDNATLTLLI---------TAFCDKGF-RGSIKQAFELLEEMVRKGW 292
           D  LS + DRG +LD+A   +           T  C+    R +  ++  L+  +  +  
Sbjct: 126 DTLLSVLADRG-LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP 184

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PNV+T  ++ID LCK+G   +A  LF ++ +     P+V T+ ++I GY K  +++  E
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L+E M+  G   +  TY +LI   CK G  E AY     M +EG   N+  ++  +D  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+G V+EA +L  +   R +  ++ TYT L+    K      A+ L   MV+ G+  ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YT L+   C+++K+ E+E   +    AG+   +  YT++I G+  + N   A+     
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G   D   YGALI GLC   KLDEA      M   G+ P  +   T+     K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 593 SATAMIILES-LDKKLWIRTVN--TLIRKLCSEKRVGMAALFFHKL--LGKDQNV 642
              A+ +L+  LD       +    LI  LC    +  A   F+K+  LG D NV
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 8/374 (2%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+  L  +G  + A R   + VR     PN  T   ++    ++    R+  L+ R+ EQ
Sbjct: 128 LLSVLADRGLLDDAVRAVAR-VRELRVPPNTRTCNHILLRLARD----RSGRLVRRLFEQ 182

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
              PN  T+  +I   CK G    A  L   M + GC P++  +N++IDG  K G + E 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            +L+++  +   +AD +TY  L++   K    + A G F  M + G+  ++  ++T + A
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC++  ++E+ K F +    G+   + TYT +I G  + G +  A+     M + G   +
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  L+ GLCK+ K+ EA      M   G+   E+   TL + +    +S  A+ +L 
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 602 SLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            +  K   L I     LI+ LC+  ++  A     K+       + +    + +AC++S 
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 659 KYALFSDLSQRIAE 672
           K      + Q+I +
Sbjct: 483 KVPEAIAMLQKILD 496



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 43/88 (48%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  + + G L + F++  +M ++GL L        +   C L ++  A EVF EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEA 242
              G+  D + Y  ++  Y ++G + EA
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEA 662


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 214/438 (48%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L+E   +V EM  +G      T N ++    + G +E A   F EM  +G
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  ++   V A+C+ G V EA +  + M  RG + +  T T L+   C  G    + 
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG---RLD 357

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EMV +G  PNV T+TV++DGLCK+G   +A  + L L+     K N   YT +
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV-LSLMERGGVKANELLYTTL 416

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+       RA  LL +MK +G+  + + Y +LI+G CK    + A  L+  M   G 
Sbjct: 417 IHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGL 476

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  I+D L K G+  EA  LL K      Q + +TY  L+    K     +A+ 
Sbjct: 477 RPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAIS 536

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M + GL+P++ AYT LI  FC+   + ++     E I  G+   K  YTS+I GY+
Sbjct: 537 HFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +  N+  A     +M + G   D   Y   ISG C  + + EA      MIG GI+P + 
Sbjct: 597 KQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 656

Query: 579 TRVTLAYEYCKQGDSATA 596
               L  +Y K G+   A
Sbjct: 657 VYNCLIRKYQKLGNMEEA 674



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 4/403 (0%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C+ G +  A  +F  M A G   D  +Y  ++  Y + G + E ++ +S M
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  T   LI  F      G +++A+    EM R+G   NV T +  +D  CK+
Sbjct: 262 RKSGCAADVVTYNALINCFSK---FGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++A +LF ++ R     PN  TYT+++ G CK  +++ A +LL+ M  QGL+PN  T
Sbjct: 319 GLVQEAMKLFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT ++ G CK G    A +++ LM + G   N   Y  +I G       + A +LL +  
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + ++ D   Y  L+    K  +  +A  L  +M   GL P+   YTT++ A  +  K  
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+     + + +G  P   TY ++I G  + G+IS A+ +F +M ++G  P+   Y ALI
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
            G CK   L++A      MI KG+S  +V   +L   Y KQ +
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 195/389 (50%), Gaps = 5/389 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++   C+ G + EA      M   G   D  T   LI  +   G  G +++  +L+
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGY---GKCGDLEEVEQLV 258

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM + G   +V T+  LI+   K G  EKA+  F ++ R      NV T++  +  +CK
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ-GVVANVVTFSTFVDAFCK 317

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E  +  A  L  +M+ +G++PN  TYTSL+ G CK G  + A  L+D M  +G  PN+  
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  ++DGLCK+G+V EA  +L    +  ++A+++ YT L+  H     +++AL L  +M 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+  D+  Y TLI   C+ +K+ E++    +    GL P    YT+++    + G  S
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            AV    ++   G  P+ +TY ALI GLCK   + EA   +  M   G+ P       L 
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 585 YEYCKQGDSATAMIIL-ESLDKKLWIRTV 612
             +CK G    AM ++ E +DK + +  V
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKV 586



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 175/374 (46%), Gaps = 10/374 (2%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           R+   P+V     L+  L   G  + A R   + VR     PN  T   ++    +    
Sbjct: 129 RRSALPSVVD--TLLSLLADHGLLDDAVRALAR-VRQLRVPPNTRTCNHILLRLAR---- 181

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           NR   L+ R+ +   +PN  T+  +I   CK G    A  L   M   GC+P++  YN++
Sbjct: 182 NRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSL 241

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           IDG  K G ++E  +L+ +  +    AD +TY  L++   K    ++A   F  M + G+
Sbjct: 242 IDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGV 301

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
             ++  ++T + AFC++  ++E+ K F +    G+ P + TYTS++ G  + G +  A+ 
Sbjct: 302 VANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 361

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
               M   G  P+ +TY  ++ GLCK+ K+ EA      M   G+   E+   TL + + 
Sbjct: 362 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHF 421

Query: 589 KQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
              +S  A+ +L  +  K   L +    TLI  LC +++V  A    HK+ G     + V
Sbjct: 422 MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTV 481

Query: 646 SLAALKNACYESNK 659
               + +A +++ K
Sbjct: 482 IYTTIMDALFKAGK 495


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 221/449 (49%), Gaps = 9/449 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V   ++  RL++   ++ EM +       +TL  VV   C    V+ A E+ +EM  RG
Sbjct: 45  LVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 104

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+A +Y  +V   C+  R+ EA   +  M +RG      T   +IT FC +  R  + 
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC-RARR--VD 161

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A   +E+MV +G  P++ T+T LI G CK     +   L  ++ R   + P++ TY+ +
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR-GFTPDIVTYSTV 220

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A  + E M      P   TY SLI G+C+ G+ + A  L+  M  + C
Sbjct: 221 IDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  ++   CK GR+ +AYEL ++    +L  D +T+T L+     +   + AL 
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   + + G  P I+ Y  ++  +C+  +++++E+   +  + G  P   TY  ++ G  
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397

Query: 519 RDGNISSAVKYFQRMNQIG--CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           R G    A++Y  ++N  G  C      Y  ++  LC+  + D+A QFYE MI +G  P 
Sbjct: 398 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 457

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDK 605
             T  T+ +  CK      A  +LE + K
Sbjct: 458 AATFATVVFALCKAHQPQQAHELLEEMIK 486



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 213/435 (48%), Gaps = 9/435 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V S     R+ +   +V EM + G+     T + +V   C+   ++ A  + + M  RG
Sbjct: 80  VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++  +CR  RV EA  ++  M+  G   D  T T LI  FC       + 
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSR---DVG 196

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  ELL E+ R+G+ P++ T++ +IDGLCK G    A  +F ++    +  P   TY ++
Sbjct: 197 RGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCAPTAITYNSL 252

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC+   M+ A  LL +M +    P+  TYT+L+   CK+G  + AY+L   M     
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  + +++DGLC +GR+++A ELL++  +R       TY  ++  + K  + ++A  
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT-AGLFPTKETYTSMICGY 517
           L       G  P+   Y  L+A  CR  +  ++ ++  +  +  G  PT     ++I   
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432

Query: 518 L-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           L RDG    AV++++ M Q G  P   T+  ++  LCK  +  +A +  E MI  G +P 
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492

Query: 577 EVTRVTLAYEYCKQG 591
             T   +   YC+ G
Sbjct: 493 PGTCDAVVSAYCRAG 507



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 228/484 (47%), Gaps = 19/484 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++      GRL+    +  +M +   P   +    V G++    L + A +V  EM +  
Sbjct: 11  VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRD-AVQVLQEMVSAR 69

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D ++  ++V + C   RV +A   +  ML RG   +  T + L+   C K  R  + 
Sbjct: 70  HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC-KCER--LD 126

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+E M  +G  P V T+  +I G C+    ++A     ++V ++   P++ TYTA+
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMV-AEGCHPDIITYTAL 185

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK   + R   LL  +  +G  P+  TY+++I G CK G    A D+ + M    C
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---C 242

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    YN++I G C+ G + EA  LL K    +   D +TYT L+S   K      A  
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +MV   L+PD+  +T+L+   C + +M+++ +  +E    G  PT  TY  ++ GY 
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A +        G  P+ +TY  L++G C+  + D+A Q+ + +  +G  PC  
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG-GPCPT 421

Query: 579 TRVTLAY---EYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFF 632
           +    A      C+ G +  A+   E + ++ ++    T  T++  LC   +   A    
Sbjct: 422 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA---- 477

Query: 633 HKLL 636
           H+LL
Sbjct: 478 HELL 481



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 176/372 (47%), Gaps = 43/372 (11%)

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG---------- 341
             P    H V+I GLC+ G    A  ++ ++  +D + P+  TYT ++ G          
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGLSKARRLRDA 58

Query: 342 -------------------------YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                                     C  ++++ A  L+E M  +G+  N  TY++L+ G
Sbjct: 59  VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK    + A  L++ M + GC P +  YN+II G C+  RV EA+  +++        D
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            ITYT L+    K  +  + L L   + + G  PDI  Y+T+I   C+  +++++   F+
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E   A   PT  TY S+I GY R G++  A++   +M    CAPD +TY  L+S  CK  
Sbjct: 239 EMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVN 613
           +LD+A + ++ M+   +SP  VT  +L    C +G    A+ +LE + ++     I T N
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 614 TLIRKLCSEKRV 625
            ++   C   +V
Sbjct: 356 CVVDGYCKANQV 367



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 197/411 (47%), Gaps = 29/411 (7%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRH------FMRLYIV--CATSLISNGNF 149
           ++A+ +V ++A    +   +++     GF + R       FM   +   C   +I+    
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT---- 181

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
                    ++  F +   +  G  ++ E+T  G      T + V+   C+ G +  A +
Sbjct: 182 ------YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 210 VFDEM-CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +F+EM CA      A +Y  ++  YCR G + EA R L  M+D     D  T T L++AF
Sbjct: 236 IFEEMSCA----PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G    +  A+EL ++MV     P+V T T L+DGLC +G  E A  L  ++ R    
Sbjct: 292 CKMG---RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR-GC 347

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P ++TY  ++ GYCK  ++ +AE L+   + +G +PNT TY  L+ G C+ G  ++A  
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 389 LMDLMGKEG--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +D +  EG  C  ++  Y  I+D LC+ GR  +A +  ++  QR       T+  ++  
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
             K  + +QA  L   M+K G  P       +++A+CR   ++++++   E
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 1/289 (0%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P T  +  +I G C+ G    A  +   M  +   P+   Y  ++ GL K  R+++A ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L++        D  T T+++           A  L   M+  G+  +   Y+ L+   C+
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            +++ E+    +     G  PT  TY S+I G+ R   +  A  + ++M   GC PD IT
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y ALI G CK   +    +    +  +G +P  VT  T+    CK G    A+ I E + 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 605 KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                 T N+LI   C    +  A     K++      D V+   L +A
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 221/449 (49%), Gaps = 4/449 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L E   +V EM  +G      T N ++   C+ G +E A   F  M   G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  ++   V A+C+ G V EA +  + M  RG  L+  T T LI   C  G    + 
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG---RLD 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EMVR+G   NV T+TVL+DGLCK+    +A  + L+++     + N   YT +
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV-LRMMEKAGVRANELLYTTL 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+   +   +A  LL  MK +GL  + + Y +LI G C V   + A  L+  M + G 
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++D   K G+V EA  +L+K      Q + ITY  L+    K     +A+ 
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M   GL+P++ AYT L+   C+   + E+ + F E +  G+   K  YT+++ GYL
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A     +M   G   D   Y   ISG C  + + EA + +  MIG GI+P   
Sbjct: 585 KQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKL 607
               L  +Y K G+   A+ + + +++ L
Sbjct: 645 VYNCLISKYQKLGNLEEAISLQDEMERVL 673



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 211/437 (48%), Gaps = 8/437 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  ++S  A+ G L +    V  +    +P  T T N ++              +F+++
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A  V     ++ +++   C+ G + EA    S M + G + D  T   LI  +   G  
Sbjct: 184 PAPNV----FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY---GKC 236

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  +L+EEM R G K +V T+  LI+  CK G  E A+  F  + R +    NV T
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVT 295

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++  +  +CKE  +  A  L  +M+ +G+  N  TYT LI G CK G  + A  L+D M 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   N+  Y  ++DGLCK+ +V EA ++L+   +  ++A+++ YT L+  H     ++
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +ALGL   M   GL  DI  Y  LI   C   K+ E++    +   +GL P    YT+M+
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G +  A+   Q++   G  P+ ITY ALI GLCK   +DEA   +  M   G+ 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 575 PCEVTRVTLAYEYCKQG 591
           P       L    CK G
Sbjct: 536 PNVQAYTALVDGLCKNG 552



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 196/415 (47%), Gaps = 17/415 (4%)

Query: 243 DRWLSAMLDRGAILDNATLTLLI---------TAFCDKGF-RGSIKQAFELLEEMVRKGW 292
           D  LS + DRG +LD+A   +           T  C+    R +  ++  L+  +  +  
Sbjct: 126 DTLLSVLADRG-LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP 184

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PNV+T  ++ID LCK+G   +A  LF ++ +     P+V T+ ++I GY K  +++  E
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L+E M+  G   +  TY +LI   CK G  E AY     M +EG   N+  ++  +D  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+G V+EA +L  +   R +  ++ TYT L+    K      A+ L   MV+ G+  ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YT L+   C+++K+ E+E   +    AG+   +  YT++I G+  + N   A+     
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G   D   YGALI GLC   KLDEA      M   G+ P  +   T+     K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 593 SATAMIILES-LDKKLWIRTVN--TLIRKLCSEKRVGMAALFFHKL--LGKDQNV 642
              A+ +L+  LD       +    LI  LC    +  A   F+K+  LG D NV
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 8/374 (2%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+  L  +G  + A R   + VR     PN  T   ++    ++    R+  L+ R+ EQ
Sbjct: 128 LLSVLADRGLLDDAVRAVAR-VRELRVPPNTRTCNHILLRLARD----RSGRLVRRLFEQ 182

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
              PN  T+  +I   CK G    A  L   M + GC P++  +N++IDG  K G + E 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            +L+++  +   +AD +TY  L++   K    + A G F  M + G+  ++  ++T + A
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC++  ++E+ K F +    G+   + TYT +I G  + G +  A+     M + G   +
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  L+ GLCK+ K+ EA      M   G+   E+   TL + +    +S  A+ +L 
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 602 SLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            +  K   L I     LI+ LC+  ++  A     K+       + +    + +AC++S 
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 659 KYALFSDLSQRIAE 672
           K      + Q+I +
Sbjct: 483 KVPEAIAMLQKILD 496



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 43/88 (48%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  + + G L + F++  +M ++GL L        +   C L ++  A EVF EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEA 242
              G+  D + Y  ++  Y ++G + EA
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEA 662


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 211/410 (51%), Gaps = 4/410 (0%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++GR+KE   +++ M   G      + + VV   C  G ++   ++ + M  +G+  ++ 
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            Y  ++   CR+ ++ EA+   S M+ +G + D    T LI  FC    RG I+ A +  
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFF 374

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM  +   P+V T+T +I G C+ G   +A +LF ++      +P+  T+T +I+GYCK
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCK 433

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              M  A  +   M + G  PN  TYT+LI G CK G+ + A +L+  M K G  PNI+ 
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+I++GLCK G ++EA +L+ +     L AD +TYT L+  + K  E  +A  +   M+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             GL P I  +  L+  FC    +++ EK     +  G+ P   T+ S++  Y    N+ 
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +A   ++ M   G  PD  TY  L+ G CK   + EA   ++ M GKG S
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 241/498 (48%), Gaps = 7/498 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E    G+    ++ N V+   C+LG ++ A  +   M  +G   D  SY  +V  YCR G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +  + +  M  +G   ++     +I   C       + +A E   EM+R+G  P+  
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---KLAEAEEAFSEMIRQGILPDTV 352

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            +T LIDG CK+G    A + F ++  S +  P+V TYTA+ISG+C+   M  A  L   
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL P++ T+T LI G+CK G+ + A+ + + M + GC+PN+  Y  +IDGLCK+G 
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A ELL + ++  LQ +  TY  +++   K    ++A+ L      AGLN D   YTT
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+ A+C+  +M ++++  +E +  GL PT  T+  ++ G+   G +    K    M   G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            AP+  T+ +L+   C ++ L  A   Y+ M  +G+ P   T   L   +CK  +   A 
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651

Query: 598 IILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            + + +  K   + + T + LI+     K+   A   F ++  +    D+       +  
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711

Query: 655 YESNKYALFSDLSQRIAE 672
           Y+  +     D    I E
Sbjct: 712 YKGKRPDTIVDPIDEIIE 729



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 207/416 (49%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ +   G L + + ++  M   GL   +     ++G+ C +  +  AEE F EM  +G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  ++  +C+ G +  A ++   M  R    D  T T +I+ FC     G + 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMV 403

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  EM  KG +P+  T T LI+G CK G  + AFR+   ++++    PNV TYT +
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTL 462

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CKE  ++ A  LL  M + GL PN  TY S++ G CK GN E A  L+      G 
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   Y  ++D  CK G + +A E+LK+   + LQ   +T+ +L++        +    
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+  G+ P+   + +L+  +C +  +K +   +++  + G+ P  +TY +++ G+ 
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +  N+  A   FQ M   G +    TY  LI G  K+ K  EA + ++ M  +G++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
           +D   + +        G + EA R    ML+ G +L   +  + +T      ++ +   A
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TA 230

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             +  E    G   NV ++ ++I  +C+ G  ++A  L L L+    Y P+V +Y+ +++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVN 289

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYC+  ++++   L+E MK +GL PN+  Y S+I   C++     A +    M ++G  P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +   Y  +IDG CK+G ++ A +   +   R++  D +TYT ++S   +  +  +A  LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M   GL PD   +T LI  +C+   MK++ +     I AG  P   TYT++I G  ++
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++ SA +    M +IG  P+  TY ++++GLCK   ++EA +        G++   VT 
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529

Query: 581 VTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL   YCK G+   A  IL E L K L   I T N L+   C    +       + +L 
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589

Query: 638 KDQNVDRVSLAAL-KNACYESN---KYALFSDLSQRIAEGIG 675
           K    +  +  +L K  C  +N     A++ D+  R   G+G
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---GVG 628



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F + G ++       EM +  +     T   ++   C++G +  A ++F EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+  D+ ++  ++  YC+ G + +A R  + M+  G   +  T T LI   C +   
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE--- 469

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +  A ELL EM + G +PN++T+  +++GLCK G  E+A +L  +   +     +  T
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVT 528

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++  YCK  +M++A+ +L+ M  +GL P   T+  L+ G C  G  E    L++ M 
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  PN   +N+++   C +  ++ A  + K    R +  D  TY  L+  H K    K
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
           +A  LF  M   G +  +  Y+ LI  F ++KK  E+ + F +    GL   KE +
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 212/436 (48%), Gaps = 20/436 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +  ++    +   T+ +N +    C  G V  A  + D M   G+  D  +Y 
Sbjct: 166 RVSEALDLFHQICRPDVLTFTTLMNGL----CREGRVVEAVALLDRMVENGLQPDQITYG 221

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEE 286
             V   C+MG    A   L  M +   I  N  + + +I   C  G R S   +  L  E
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG-RHS--DSHNLFIE 278

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  PN+ T+  +I G C  G    A RL  +++      PNV TY A+I+ + KE 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEG 337

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   A  L + M  +G++PNT TY S+I G CK    + A D+  LM  +GC+P+++ + 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG C   R+ +  ELL +  +R L A+ +TY  L+       +   AL L  +M+ +
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-----------GLFPTKETYTSMIC 515
           G+ PDI    TL+   C   K+K++ + F+    +           G+ P   TY  +IC
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G + +G    A + ++ M   G  PD ITY ++I GLCKQS+LDEA Q + SM  K  SP
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 576 CEVTRVTLAYEYCKQG 591
             VT  TL   YCK G
Sbjct: 578 NVVTFNTLINGYCKAG 593



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 208/417 (49%), Gaps = 17/417 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G    +  +F EM  +G+  +  +Y  M+  +C  GR + A R L  ML+R    + 
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI AF  +G      +A EL +EM+ +G  PN  T+  +IDG CK+   + A  +
Sbjct: 324 VTYNALINAFVKEG---KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L+ +    P+V T+T +I GYC  ++++    LL  M  +GL+ NT TY +LI+G C
Sbjct: 381 FY-LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE------ 432
            VG+   A DL   M   G  P+I   N ++DGLC  G++++A E+ K A Q+       
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDA 498

Query: 433 ------LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 ++ D +TY IL+   + + +  +A  L+  M   G+ PD   Y+++I   C+Q 
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ E+ + F    +    P   T+ ++I GY + G +   ++ F  M + G   D I Y 
Sbjct: 559 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            LI G  K   ++ A   ++ MI  G+ P  +T   +   +  + +   A+ +LE L
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 232/496 (46%), Gaps = 27/496 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G+  D  ++  ++   C   RV+EA      +  R  +L  
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC-RPDVL-- 183

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    + +A  LL+ MV  G +P+  T+   +DG+CK G T  A  L
Sbjct: 184 -TFTTLMNGLCREG---RVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    + KPNV  Y+A+I G CK+ + + +  L   M+++G+ PN  TY  +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +PN+  YNA+I+   K+G+  EA EL  +   R +  + I
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  ++    KQ     A  +F  M   G +PD+  +TTLI  +C  K++ +  +   E 
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TY ++I G+   G++++A+   Q+M   G  PD +T   L+ GLC   KL
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + +++M              G+ P  +T   L      +G    A  + E +  + 
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY---- 660
            +    T +++I  LC + R+  A   F  +  K  + + V+   L N   ++ +     
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599

Query: 661 ALFSDLSQR--IAEGI 674
            LF ++ +R  +A+ I
Sbjct: 600 ELFCEMGRRGIVADAI 615



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T N ++   C+   ++ AE++F  M  +G
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC   R+ +    L  M  RG + +  T   LI  FC     G + 
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC---LVGDLN 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +L ++M+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +I G   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   MG +  +PN+  +N +I+G CK GRV +  EL  +  +R + AD I Y  L+    
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           K      AL +F  M+ +G+ PD      ++  F  +++++ +    ++
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 44/400 (11%)

Query: 283 LLEEMVRKGWKPNVYTHTVLID-----------------------------------GLC 307
           L ++M RK  + ++Y+ T+LI                                    GLC
Sbjct: 103 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC 162

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
                 +A  LF ++ R     P+V T+T +++G C+E ++  A  LL+RM E GL P+ 
Sbjct: 163 LDHRVSEALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQ 217

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGK-EGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
            TY + + G CK+G+   A +L+  M +     PN+  Y+AIIDGLCK GR  +++ L  
Sbjct: 218 ITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFI 277

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +   + +  + +TY  ++           A  L   M++  ++P++  Y  LI AF ++ 
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K  E+ + + E +  G+ P   TY SMI G+ +   + +A   F  M   GC+PD  T+ 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI G C   ++D+  +    M  +G+    VT  TL + +C  GD   A+ + + +   
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
                I T NTL+  LC   ++  A   F  +     ++D
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 15/388 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR      ++ EM    +     T N ++    + G    A E++DEM  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+  +  +Y  M+  +C+  R+  A+     M  +G   D  T T LI  +C       
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK---R 408

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I    ELL EM R+G   N  T+  LI G C  G    A  L  +++ S    P++ T  
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCN 467

Query: 337 AMISGYCKEEKMNRAEMLLERMKE-----------QGLLPNTNTYTSLIYGHCKVGNFER 385
            ++ G C   K+  A  + + M++            G+ P+  TY  LI G    G F  
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   Y+++IDGLCK+ R+ EA ++      +    + +T+  L++
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       L LFC M + G+  D   Y TLI  F +   +  +   FQE I++G++P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRM 533
              T  +M+ G+     +  AV   + +
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 155/358 (43%), Gaps = 36/358 (10%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E A  LF  ++RS    P+V  +  ++    + E+ +    L ++M+ + +  +  ++T 
Sbjct: 63  EDAIDLFSDMLRSRPL-PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--------- 423
           LI   C       A      + K G  P++  +  ++ GLC   RV EA +         
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 424 ----------------------LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
                                 LL +  +  LQ D+ITY   +    K  +T  AL L  
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 462 RMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
           +M + + + P++  Y+ +I   C+  +  +S   F E    G+FP   TY  MI G+   
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G  S+A +  Q M +   +P+ +TY ALI+   K+ K  EA + Y+ M+ +GI P  +T 
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 581 VTLAYEYCKQG--DSATAMIILESLDK-KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            ++   +CKQ   D+A  M  L +       + T  TLI   C  KR+       H++
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 8/289 (2%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +N ++  + +  R      L +K  +++++ 
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++TIL+      ++   AL  F ++ K GL+PD+  +TTL+   C   ++ E+   F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G +  AV    RM + G  PD ITYG  + G+CK 
Sbjct: 175 HQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQG-DSATAMIILESLDKKLW--IRT 611
                A      M     I P  V    +    CK G  S +  + +E  DK ++  I T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N +I   C   R   A     ++L +  + + V+  AL NA  +  K+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 8/303 (2%)

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           SG  + + +  A  L   M     LP+   +  L+    ++   +    L   M ++   
Sbjct: 54  SGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR 113

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +IY++  +I   C   ++  A     K  +  L  D +T+T LL          +AL L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F ++ +    PD+  +TTL+   CR+ ++ E+       +  GL P + TY + + G  +
Sbjct: 174 FHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229

Query: 520 DGNISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            G+  SA+   ++M +I    P+ + Y A+I GLCK  +  ++   +  M  KGI P  V
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289

Query: 579 TRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   +   +C  G  SA   ++ E L++K+   + T N LI     E +   AA  + ++
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349

Query: 636 LGK 638
           L +
Sbjct: 350 LPR 352



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+  E   +  EM + G+   T T + ++   C+   ++ A ++F  M ++    +  ++
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GSIKQAFELL 284
             ++  YC+ GRV +       M  RG + D      LI      GFR  G+I  A ++ 
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY-----GFRKVGNINGALDIF 637

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
           +EM+  G  P+  T   ++ G   K   E+A  +   L  S  Y+
Sbjct: 638 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQ 682


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D  +  +++  +C MG++T     L+ +L RG   D  TL  LI   C    +G 
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC---LKGQ 144

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    ++++ +G++ N  ++  LI+G+CK G T  A +L L+ +     KPNV  Y+
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL-LRKIDGRLTKPNVEMYS 203

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  +  TY++LIYG C  G  + A  L++ M  +
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+Y YN ++D LCK+G+V+EA  +L    +  ++ D ITY+ L+  +    E K+A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M   G+ PD+H YT LI  FC+ K + E+   F+E     + P   TY+S+I G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G I         M   G   D ITY +LI GLCK   LD A   +  M  + I P 
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
             T   L    CK G    A  + + L  K   L + T N +I   C +
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 225/453 (49%), Gaps = 39/453 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G P  T TLN ++   C  G V+ A    D++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 216 ARGVCADASSYKLMVVAYCRMGR-----------------------------------VT 240
           A+G   +  SY  ++   C++G                                    V+
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA    S M  +G   D  T + LI  FC     G +K+A  LL EMV K   PNVYT+ 
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFC---IEGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+D LCK+G  ++A  +   ++++   KP+V TY+ ++ GY    ++ +A+ +   M  
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+ +TYT LI G CK    + A +L   M ++   P I  Y+++IDGLCK GR+  
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            ++L+ +   R   AD ITY+ L+    K     +A+ LF +M    + P+I  +T L+ 
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K++++ FQ+ +T G      TY  MI G+ + G +  A+    +M   GC P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  T+  +I  L K+ + D+A +    MI +G+
Sbjct: 513 NAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 9/345 (2%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +  + A  L  R++ +G+ P+  T   LI   C +G     +
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  + K G  P+    N +I GLC KG+V++A     K   +  Q ++++Y  L++  
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +T+ A+ L  ++      P++  Y+T+I A C+ + + E+   F E    G+    
Sbjct: 175 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+++I G+  +G +  A+     M      P+  TY  L+  LCK+ K+ EA      
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 568 MIGKGISPCEVTRVT------LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           M+   + P  +T  T      L YE  K      AM ++        + T   LI   C 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD---VHTYTILINGFCK 351

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            K V  A   F ++  K+     V+ ++L +   +S +     DL
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++ F +   + E  ++  EM   N +P I +  + + G+ C+ G + Y  ++ DEM  R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL-CKSGRIPYVWDLIDEMRDR 403

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G  AD  +Y  ++   C+ G +  A    + M D+    +  T T+L+   C KG  G +
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC-KG--GRL 460

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A E+ ++++ KG+  NVYT+ V+I+G CK+G  E+A  +  K+   +   PN  T+  
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM-EDNGCIPNAFTFET 519

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I    K+++ ++AE LL +M  +GLL
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 3/199 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F RM+     P I  +  ++ +F + K    +          G+ P   T   +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G I+       ++ + G  PD +T   LI GLC + ++ +A  F++ ++ +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK GD+  A+ +L  +D +L    +   +T+I  LC  + V  A   
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F ++  K  + D V+ + L
Sbjct: 222 FSEMTVKGISADVVTYSTL 240



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 3/135 (2%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  AV  F RM  +   P  I +  ++    K      A      +  KGI P  +T  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   +C  G       +L  + K+ +     T+NTLI+ LC + +V  A  F  KLL +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 639 DQNVDRVSLAALKNA 653
              +++VS A L N 
Sbjct: 159 GFQLNQVSYATLING 173


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 212/436 (48%), Gaps = 20/436 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +  ++    +   T+ +N +    C  G V  A  + D M   G+  D  +Y 
Sbjct: 166 RVSEALDLFHQICRPDVLTFTTLMNGL----CREGRVVEAVALLDRMVENGLQPDQITYG 221

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEE 286
             V   C+MG    A   L  M +   I  N  + + +I   C  G R S   +  L  E
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG-RHS--DSHNLFIE 278

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  PN+ T+  +I G C  G    A RL  +++      PNV TY A+I+ + KE 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEG 337

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   A  L + M  +G++PNT TY S+I G CK    + A D+  LM  +GC+P+++ + 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG C   R+ +  ELL +  +R L A+ +TY  L+       +   AL L  +M+ +
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-----------GLFPTKETYTSMIC 515
           G+ PDI    TL+   C   K+K++ + F+    +           G+ P   TY  +IC
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G + +G    A + ++ M   G  PD ITY ++I GLCKQS+LDEA Q + SM  K  SP
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 576 CEVTRVTLAYEYCKQG 591
             VT  TL   YCK G
Sbjct: 578 NVVTFNTLINGYCKAG 593



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 209/419 (49%), Gaps = 17/419 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G    +  +F EM  +G+  +  +Y  M+  +C  GR + A R L  ML+R    + 
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI AF  +G      +A EL +EM+ +G  PN  T+  +IDG CK+   + A  +
Sbjct: 324 VTYNALINAFVKEG---KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L+ +    P+V T+T +I GYC  ++++    LL  M  +GL+ NT TY +LI+G C
Sbjct: 381 FY-LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE------ 432
            VG+   A DL   M   G  P+I   N ++DGLC  G++++A E+ K A Q+       
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDA 498

Query: 433 ------LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 ++ D +TY IL+   + + +  +A  L+  M   G+ PD   Y+++I   C+Q 
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ E+ + F    +    P   T+ ++I GY + G +   ++ F  M + G   D I Y 
Sbjct: 559 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            LI G  K   ++ A   ++ MI  G+ P  +T   +   +  + +   A+ +LE L +
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 232/496 (46%), Gaps = 27/496 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G+  D  ++  ++   C   RV+EA      +  R  +L  
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC-RPDVL-- 183

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    + +A  LL+ MV  G +P+  T+   +DG+CK G T  A  L
Sbjct: 184 -TFTTLMNGLCREG---RVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    + KPNV  Y+A+I G CK+ + + +  L   M+++G+ PN  TY  +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +PN+  YNA+I+   K+G+  EA EL  +   R +  + I
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  ++    KQ     A  +F  M   G +PD+  +TTLI  +C  K++ +  +   E 
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TY ++I G+   G++++A+   Q+M   G  PD +T   L+ GLC   KL
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + +++M              G+ P  +T   L      +G    A  + E +  + 
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY---- 660
            +    T +++I  LC + R+  A   F  +  K  + + V+   L N   ++ +     
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599

Query: 661 ALFSDLSQR--IAEGI 674
            LF ++ +R  +A+ I
Sbjct: 600 ELFCEMGRRGIVADAI 615



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T N ++   C+   ++ AE++F  M  +G
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC   R+ +    L  M  RG + +  T   LI  FC     G + 
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC---LVGDLN 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +L ++M+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +I G   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   MG +  +PN+  +N +I+G CK GRV +  EL  +  +R + AD I Y  L+    
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           K      AL +F  M+ +G+ PD      ++  F  +++++ +    ++
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 44/400 (11%)

Query: 283 LLEEMVRKGWKPNVYTHTVLID-----------------------------------GLC 307
           L ++M RK  + ++Y+ T+LI                                    GLC
Sbjct: 103 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC 162

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
                 +A  LF ++ R     P+V T+T +++G C+E ++  A  LL+RM E GL P+ 
Sbjct: 163 LDHRVSEALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQ 217

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGK-EGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
            TY + + G CK+G+   A +L+  M +     PN+  Y+AIIDGLCK GR  +++ L  
Sbjct: 218 ITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFI 277

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +   + +  + +TY  ++           A  L   M++  ++P++  Y  LI AF ++ 
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K  E+ + + E +  G+ P   TY SMI G+ +   + +A   F  M   GC+PD  T+ 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI G C   ++D+  +    M  +G+    VT  TL + +C  GD   A+ + + +   
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
                I T NTL+  LC   ++  A   F  +     ++D
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 173/390 (44%), Gaps = 15/390 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR      ++ EM    +     T N ++    + G    A E++DEM  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+  +  +Y  M+  +C+  R+  A+     M  +G   D  T T LI  +C       
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK---R 408

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I    ELL EM R+G   N  T+  LI G C  G    A  L  +++ S    P++ T  
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCN 467

Query: 337 AMISGYCKEEKMNRAEMLLERMKE-----------QGLLPNTNTYTSLIYGHCKVGNFER 385
            ++ G C   K+  A  + + M++            G+ P+  TY  LI G    G F  
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   Y+++IDGLCK+ R+ EA ++      +    + +T+  L++
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       L LFC M + G+  D   Y TLI  F +   +  +   FQE I++G++P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
              T  +M+ G+     +  AV   + + +
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDLQR 677



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 155/358 (43%), Gaps = 36/358 (10%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E A  LF  ++RS    P+V  +  ++    + E+ +    L ++M+ + +  +  ++T 
Sbjct: 63  EDAIDLFSDMLRSRPL-PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--------- 423
           LI   C       A      + K G  P++  +  ++ GLC   RV EA +         
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 424 ----------------------LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
                                 LL +  +  LQ D+ITY   +    K  +T  AL L  
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 462 RMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
           +M + + + P++  Y+ +I   C+  +  +S   F E    G+FP   TY  MI G+   
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G  S+A +  Q M +   +P+ +TY ALI+   K+ K  EA + Y+ M+ +GI P  +T 
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 581 VTLAYEYCKQG--DSATAMIILESLDK-KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            ++   +CKQ   D+A  M  L +       + T  TLI   C  KR+       H++
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 15/287 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +    R+ +G  ++ EM   GL   T T N ++   C +G +  A ++  +M + G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM------LD-----RGAILDNATLTLLITA 267
           VC D  +   ++   C  G++ +A     AM      LD      G   D  T  +LI  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
             ++G      +A EL EEM  +G  P+  T++ +IDGLCK+   ++A ++F+ +  S +
Sbjct: 519 LINEG---KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM-GSKS 574

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + PNV T+  +I+GYCK  +++    L   M  +G++ +   Y +LIYG  KVGN   A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           D+   M   G  P+      ++ G   K  ++ A  +L+   + +L+
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 8/289 (2%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +N ++  + +  R      L +K  +++++ 
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++TIL+      ++   AL  F ++ K GL+PD+  +TTL+   C   ++ E+   F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G +  AV    RM + G  PD ITYG  + G+CK 
Sbjct: 175 HQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQG-DSATAMIILESLDKKLW--IRT 611
                A      M     I P  V    +    CK G  S +  + +E  DK ++  I T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N +I   C   R   A     ++L +  + + V+  AL NA  +  K+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 8/303 (2%)

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           SG  + + +  A  L   M     LP+   +  L+    ++   +    L   M ++   
Sbjct: 54  SGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR 113

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +IY++  +I   C   ++  A     K  +  L  D +T+T LL          +AL L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F ++ +    PD+  +TTL+   CR+ ++ E+       +  GL P + TY + + G  +
Sbjct: 174 FHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229

Query: 520 DGNISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            G+  SA+   ++M +I    P+ + Y A+I GLCK  +  ++   +  M  KGI P  V
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289

Query: 579 TRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   +   +C  G  SA   ++ E L++K+   + T N LI     E +   AA  + ++
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349

Query: 636 LGK 638
           L +
Sbjct: 350 LPR 352


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 224/464 (48%), Gaps = 19/464 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G V  A  + D M   G+  +  +Y  +V   C+MG    A   L  M +   I  N
Sbjct: 188 CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPN 247

Query: 259 ATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
               ++ +A  D  ++ G    A  L  EM  KG  PN++T+  +I+G C  G   +A R
Sbjct: 248 V---VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  ++       P+V T++ +I+   KE K   AE L   M  +G++PNT TY S+I G 
Sbjct: 305 LLREMFER-KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K    + A  +  LM  +GC+P++  ++ +IDG C   RV +  +LL +  +R L A+ 
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITYT L+    +      AL L   M+ +G+ P++    TL+   C   K+K++ + F+ 
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483

Query: 498 AITAGLF-----------PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
              + +            P  +TY  +ICG + +G  S A + ++ M   G  PD ITY 
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           ++I GLCKQS+LDEA Q ++SM  KG SP  VT  TL   YCK G     + +   + ++
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 607 LWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
             +    T  TLI   C    +  A   F +++      D +++
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITI 647



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 241/523 (46%), Gaps = 66/523 (12%)

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI----- 166
           G +  L F    + F+   H +     C    +S       H++ +  V +F  +     
Sbjct: 135 GKITKLGFHPSLVTFSTLLHGL-----CVEDRVSEA-LHFFHQICKPNVIAFTTLMNGLC 188

Query: 167 --GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG-------LVEYAEEV------- 210
             GR+ E  +++  M  +GL     T   +V   C++G       L+   EEV       
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 211 ----------------------FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                                 F EM  +G+  +  +Y  M+  +C  GR +EA R L  
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M +R    D  T ++LI A   +   G   +A EL  EM+ +G  PN  T+  +IDG  K
Sbjct: 309 MFERKMSPDVVTFSVLINALVKE---GKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +   + A R+F  L+ +    P+V T++ +I GYC  ++++    LL  M  +GL+ NT 
Sbjct: 366 QNRLDAAERMFY-LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TYT+LI+G C++GN   A DL+  M   G  PN+   N ++DGLC  G++++A E+  K 
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF-KV 483

Query: 429 FQR------------ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            Q+            +++ D  TY IL+   + + +  +A  L+  M   GL PD   Y 
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           ++I   C+Q ++ E+ + F    + G  P   T+T++I GY + G +   ++ F  M + 
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           G   + ITY  LI G C+   ++ A   ++ MI  G+ P  +T
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 50/403 (12%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+ +F EM  +G+  +  +Y  M+  +C  GR +EA R L  M +R    D  T ++LI 
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A   +G      +A EL  EM+ +G  PN  T+  +IDG  K+   + A R+F  L+ + 
Sbjct: 327 ALVKEG---KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY-LMATK 382

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V T++ +I GYC  ++++    LL  M  +GL+ NT TYT+LI+G C++GN   A
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK-------------------- 426
            DL+  M   G  PN+   N ++DGLC  G++++A E+ K                    
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502

Query: 427 --------------------------KAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
                                     +   R L  D ITY  ++    KQ+   +A  +F
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M   G +PD+  +TTLI  +C+  ++ +  + F E    G+     TY ++I G+ + 
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           GNI+ A+  FQ M   G  PD IT   +++GL  + +L  A Q
Sbjct: 623 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 212/469 (45%), Gaps = 21/469 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G      ++  ++   C   RV+EA  +   +     I   
Sbjct: 122 CSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVI--- 178

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              T L+   C +G    + +A  LL+ MV  G +PN  T+  ++DG+CK G T  A  L
Sbjct: 179 -AFTTLMNGLCREG---RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+      KPNV  Y+A+I G  K+ +   A+ L   M+E+G+ PN  TY  +I G C
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +   +P++  ++ +I+ L K+G+  EA EL  +   R +  + I
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  ++    KQ     A  +F  M   G +PD+  ++ LI  +C  K++ +  K   E 
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL     TYT++I G+ + GN+++A+   Q M   G  P+ +T   L+ GLC   KL
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + ++ M               + P   T   L      +G  + A  + E +  + 
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +    T N++I  LC + R+  A   F  +  K  + D V+   L N 
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 177/383 (46%), Gaps = 15/383 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM++ F   GR  E   ++ EM    +     T + ++    + G    AEE+++EM  
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP 346

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+  +  +Y  M+  + +  R+  A+R    M  +G   D  T ++LI  +C       
Sbjct: 347 RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK---R 403

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +    +LL EM R+G   N  T+T LI G C+ G    A  L  +++ S    PNV T  
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMI-SSGVCPNVVTCN 462

Query: 337 AMISGYCKEEKMNRAEMLLERMKE-----------QGLLPNTNTYTSLIYGHCKVGNFER 385
            ++ G C   K+  A  + + M++             + P+  TY  LI G    G F  
Sbjct: 463 TLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSE 522

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   YN++IDGLCK+ R+ EA ++      +    D +T+T L++
Sbjct: 523 AEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLIN 582

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       L +FC M + G+  +   Y TLI  FC+   +  +   FQE I++G++P
Sbjct: 583 GYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYP 642

Query: 506 TKETYTSMICGYLRDGNISSAVK 528
              T  +M+ G      +  AV+
Sbjct: 643 DTITIRNMLTGLWSKEELKRAVQ 665



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 10/403 (2%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A +L   MVR    P V     L+  + +    +    L  K+        N++++T
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKM-EMRRIPCNIYSFT 115

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I  +C   K+  A     ++ + G  P+  T+++L++G C       A      +   
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI--- 172

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C PN+ A+  +++GLC++GRV EA  LL +  +  LQ ++ITY  ++    K  +T  A
Sbjct: 173 -CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231

Query: 457 LGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           L L  +M +   + P++  Y+ +I    +  +  +++  F E    G+ P   TY  MI 
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+   G  S A +  + M +   +PD +T+  LI+ L K+ K  EA + Y  M+ +GI P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 576 CEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRTVNTLIRKLCSEKRVGMAALFF 632
             +T  ++   + KQ   D+A  M  L +       + T + LI   C  KRV       
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 633 HKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           H++  +    + ++   L +  C   N  A    L + I+ G+
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 27/369 (7%)

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANE--AGSMVALSFFYWAI--GFAKFR 130
           + F  + SP  +   + I++L  E        L NE     ++  +  Y ++  GF+K  
Sbjct: 308 EMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQN 367

Query: 131 HF---MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
                 R++ + AT   S             ++  +    R+ +G  ++ EM+  GL   
Sbjct: 368 RLDAAERMFYLMATKGCSPDVI-----TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T T   ++   C+LG +  A ++  EM + GVC +  +   ++   C  G++ +A     
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482

Query: 248 AMLDRGAILDNA-----------TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
            M      LD +           T  +LI    ++G      +A EL EEM  +G  P+ 
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEG---KFSEAEELYEEMPHRGLVPDT 539

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T+  +IDGLCK+   ++A ++F  +  S  + P+V T+T +I+GYCK  ++     +  
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSM-GSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFC 598

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M  +G++ N  TY +LI+G C+VGN   A D+   M   G  P+      ++ GL  K 
Sbjct: 599 EMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658

Query: 417 RVQEAYELL 425
            ++ A + L
Sbjct: 659 ELKRAVQCL 667



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 10/290 (3%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   + A DL   M +    P +  +  ++  + +  R      L +K   R +  
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           +  ++TIL+      ++   AL  F ++ K G +P +  ++TL+   C + ++ E+  FF
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P    +T+++ G  R+G +  AV    RM + G  P+ ITYG ++ G+CK 
Sbjct: 170 HQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 556 SKLDEACQFYESM--IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IR 610
                A      M  + + I P  V    +     K G    A  +   + +K     + 
Sbjct: 226 GDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLF 284

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
           T N +I   CS  R   A     ++  +  + D V+ + L NA  +  K+
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 225/438 (51%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   G ++E F ++   ++ G+     T N ++   C++G  + A++V  EM   G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A++Y  ++V  CR   + EA      M  RG + D  + + LI      G    + 
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG---HLY 414

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA     EM R G  P+   +T+LIDG C+ G    A ++  +++    +  +V TY   
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTF 473

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK++    A+ML   M E+G++P+  T+T+LI G+CK GN ++A +L + M +   
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +IDG CK G +  A EL     ++++  D I+Y  +L+         +AL 
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G+ P++    TLI  +CR   M ++ ++  + I+ G+ P   +Y ++I GYL
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ N+  A      M + G   + ITY  +++G C + K+ EA Q    MI  GI+P   
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 579 TRVTLAYEYCKQGDSATA 596
           T  +L   +  Q +   A
Sbjct: 714 TYSSLINGHVSQDNMKEA 731



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 199/413 (48%), Gaps = 39/413 (9%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           +IG+      ++IEM   GL    +T N ++   C    +  A+E+FDEM  RGV  D  
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 225 S-----------------------------------YKLMVVAYCRMGRVTEADRWLSAM 249
           S                                   Y +++  +CR G +++A +    M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L RG  +D  T    +   C K        A  L  EMV +G  P+ YT T LI G CK 
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKM---FADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KA  LF  +VR+ N KP+  TY  +I G+CK  +M RA+ L + M  + ++P+  +
Sbjct: 516 GNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +++ G C  G    A +L D M ++G  PN+   N +I G C+ G + +AYE L K  
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D  +Y  L+  +LK+A  ++A  L   M K GL  +I  Y  ++  FC + KM+
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           E+E+  ++ I  G+ P   TY+S+I G++   N+  A ++   M Q G  PD+
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 222/442 (50%), Gaps = 4/442 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +V ++ +  +L+EG      +   G+ +  +  N+++G     G V+ A E++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +  +MV A C+  +      +LS M  +G   D  T   LI A+C +G  
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL- 307

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +++AF+LL     +G +P + T+  ++ GLCK G  ++A  + +++++     PN  T
Sbjct: 308 --VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAAT 364

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++   C+ + +  A+ + + M  +G+LP+  +++SLI    + G+  +A      M 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P+   Y  +IDG C+ G + +A ++  +   R    D +TY   L+   K+    
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  LF  MV+ G+ PD + +TTLI  +C+   M ++   F+  +   L P K TY ++I
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ + G +  A + +  M +    PD+I+YG +++G C    L EA    + M+ KGI 
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 575 PCEVTRVTLAYEYCKQGDSATA 596
           P  VT  TL   YC+ GD   A
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKA 626



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 211/450 (46%), Gaps = 44/450 (9%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y L+V  Y +  ++ E       +  +G  +       L+      G+   +  A+E+  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGW---VDLAWEIYG 246

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+VR G + NVYT  ++++ LCK    E     FL  +       ++ TY  +I+ YC+E
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVM-FFLSDMEGKGVFADIVTYNTLINAYCRE 305

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  LL     +G+ P   TY +++YG CK+G ++RA D++  M + G TPN   Y
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++  +C++  + EA E+  +  +R +  D ++++ L+    +     QAL  F  M +
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 466 AGLNPDIHAYTTLIAAFCR----------------------------------QKKM-KE 490
           +G+ PD   YT LI  FCR                                  +KKM  +
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++  F E +  G+ P   T+T++I GY +DGN+  A+  F+ M +    PD +TY  LI 
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           G CK  ++  A + ++ MI K I P  ++  T+   +C  G    A+ + + + +K  IR
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK-GIR 604

Query: 611 ----TVNTLIRKLCSEKRVGMAALFFHKLL 636
               T NTLI+  C    +  A  +  K++
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 165/414 (39%), Gaps = 90/414 (21%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N+K +  + +AM+    +  +++ A+  + RM  +  +       SLI      G+    
Sbjct: 130 NFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLI 189

Query: 387 YDLM-----------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YDL+                  ++ ++G + +I A N ++ GL + G V  A+E+  +  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 430 QRELQ-----------------------------------ADKITYTILLSEHLKQAETK 454
           +  ++                                   AD +TY  L++ + ++   +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 455 QALGL----------------------FCR-------------MVKAGLNPDIHAYTTLI 479
           +A  L                       C+             M++ GL P+   Y TL+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              CR+  + E+++ F E    G+ P   +++S+I    R+G++  A+ +F+ M + G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PDN+ Y  LI G C+   L +A +  + M+ +G     VT  T     CK+   A A ++
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              + ++  +    T  TLIR  C +  +  A   F  ++  +   D+V+   L
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 229/443 (51%), Gaps = 13/443 (2%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P+I    N+++G   ++     A  +  +M  +G+ A+  +  +++  +C +G++  +  
Sbjct: 9   PIIE--FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  +L  G   D  TL  L+   C    +G +K++    +++V +G++ +  ++  L++
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLC---LKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK G T  A +L L+++   + +PNV  Y  +I G CK++ +N A  L   M  +G+ 
Sbjct: 124 GLCKIGETRCAVKL-LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TYT+LIYG C +G    A+ L+D M  +   P +Y YN +I+ LCK+G V+EA  L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    +  ++   +TY+ L+  +    E + A  +F  MV+ G+NP++++Y  +I   C+
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K++ E+    +E +   + P   TY S+I G  + G I+SA+     M+  G   D +T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y +L+  LCK   LD+A   +  M  +GI P   T   L    CK G    A  + + L 
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422

Query: 605 KK-----LWIRTVNTLIRKLCSE 622
            K     +W  TV  +I  LC E
Sbjct: 423 VKGCCIDVWTYTV--MISGLCKE 443



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 214/430 (49%), Gaps = 5/430 (1%)

Query: 151 RAHEV-MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           RA+ V +  +++ F  +G++   FS++ ++   G    T TLN ++   C  G V+ +  
Sbjct: 42  RANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLH 101

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
             D++ A+G   D  SY  ++   C++G    A + L  + DR    +      +I   C
Sbjct: 102 FHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLC 161

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                  + +A++L  EM  +G  P+  T+T LI G C  G    AF L  +++   N  
Sbjct: 162 KDKL---VNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK-NIN 217

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P V+ Y  +I+  CKE  +  A+ LL  M ++G+ P   TY++L+ G+C VG  + A  +
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M + G  PN+Y+YN +I+GLCK  RV EA  LL++   + +  D +TY  L+    K
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                 AL L   M   G   D+  YT+L+ A C+ + + ++   F +    G+ PT  T
Sbjct: 338 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 397

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G  + G + +A + FQ +   GC  D  TY  +ISGLCK+   DEA      M 
Sbjct: 398 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 457

Query: 570 GKGISPCEVT 579
             G  P  VT
Sbjct: 458 DNGCIPNAVT 467



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 181/394 (45%), Gaps = 37/394 (9%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L ++M  KG + N  T  +LI+  C  G    +F +  K+++   Y+P+  T   ++
Sbjct: 29  AISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKL-GYQPDTITLNTLM 87

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C + ++ ++    +++  QG   +  +Y +L+ G CK+G    A  L+ ++      
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTR 147

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  YN IIDGLCK   V EAY+L  +   R +  D ITYT L+       +   A  L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSL 207

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+   +NP ++ Y  LI A C++  +KE++         G+ P   TY++++ GY  
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G + +A + F  M Q+G  P+  +Y  +I+GLCK  ++DEA      M+ K + P  VT
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
                                            N+LI  LC   R+  A    +++  + 
Sbjct: 328 Y--------------------------------NSLIDGLCKSGRITSALNLMNEMHHRG 355

Query: 640 QNVDRVSLAALKNA-CYESN---KYALFSDLSQR 669
           Q  D V+  +L +A C   N     ALF  + +R
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 182/394 (46%), Gaps = 15/394 (3%)

Query: 80  RSSPPRLNL-QIDIDSLTHEQAITVVASLANEAGSM----VALSFFYWAIGFAKFRHFMR 134
           RS+ P + +    ID L  ++ +     L +E  +      A+++     GF      M 
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMG 203

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV 194
            + +    ++ N N      +   ++++  + G +KE  +++  MT  G+     T + +
Sbjct: 204 AFSLLDEMILKNIN--PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTL 261

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           +   C +G V+ A+++F  M   GV  +  SY +M+   C+  RV EA   L  ML +  
Sbjct: 262 MDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 321

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
           + D  T   LI   C     G I  A  L+ EM  +G   +V T+T L+D LCK    +K
Sbjct: 322 VPDTVTYNSLIDGLCKS---GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  LF+K+ +    +P ++TYTA+I G CK  ++  A+ L + +  +G   +  TYT +I
Sbjct: 379 ATALFMKM-KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 437

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G CK G F+ A  +   M   GC PN   +  II  L +K    +A +LL +   + L 
Sbjct: 438 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL- 496

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
              +     +++   Q E  +A  L   M+  GL
Sbjct: 497 ---LVLDFKVADVFVQNENDKAEKLLHEMIAKGL 527



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 6/341 (1%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           LVR   + P +  +  ++    K ++   A  L ++M+ +G+  N  T   LI   C +G
Sbjct: 3   LVR---HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLG 59

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
               ++ ++  + K G  P+    N ++ GLC KG V+++     K   +  Q D ++Y 
Sbjct: 60  QMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYG 119

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            LL+   K  ET+ A+ L   +      P++  Y T+I   C+ K + E+   + E    
Sbjct: 120 TLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+FP   TYT++I G+   G +  A      M      P    Y  LI+ LCK+  + EA
Sbjct: 180 GIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA 239

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
                 M  +GI P  VT  TL   YC  G+   A  I  ++ +      + + N +I  
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           LC  KRV  A     ++L K+   D V+  +L +   +S +
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 340


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 217/439 (49%), Gaps = 9/439 (2%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L E   ++++M + G+   T   N V+G  C  G + +A  V+ +M       D  +Y  
Sbjct: 96  LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTK 154

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           +V    + GR+ +A + L  M+    + DN TLT+++ + C       +  A EL+EEM+
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC---LGDRVDDARELVEEML 211

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            +G   N  T++ L+DGLCK    ++A  L L  V    + P++ TY+ +I G CK  ++
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 271

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  + E M      P   TY SLI G+C+ G+ + A  L+  M  + C P++  Y  +
Sbjct: 272 RDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +   CK GR+ +AYEL ++    +L  D +T+T L+     +   + AL L   + + G 
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P I+ Y  ++  +C+  +++++E+   +  + G  P   TY  ++ G  R G    A++
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 529 YFQRMNQIG--CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           Y  ++N  G  C      Y  ++  LC+  + D+A QFYE MI +G  P   T  T+ + 
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 587 YCKQGDSATAMIILESLDK 605
            CK      A  +LE + K
Sbjct: 509 LCKAHQPQQAHELLEEMIK 527



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 203/406 (50%), Gaps = 10/406 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V   ++ GRL++   ++ EM +       +TL  VV   C    V+ A E+ +EM  RG
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           + A+A +Y  +V   C+  R+ EA    L  +  RG   D  T + +I   C  G    +
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG---RL 271

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A ++ EEM      P   T+  LI G C+ G  ++A RL  K+V  DN  P+V TYT 
Sbjct: 272 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV-DDNCAPDVITYTT 327

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++S +CK  +++ A  L ++M    L P+  T+TSL+ G C  G  E A +L++ + + G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P IY YN ++DG CK  +V++A EL+     R    + +TY IL++   +   T QAL
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447

Query: 458 GLFCRM-VKAGLNP-DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
               ++  + G  P  +  Y  ++ A CR  +  ++ +F++E I  G  P   T+ +++ 
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
              +      A +  + M + G  P   T  A++S  C+   + +A
Sbjct: 508 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 12/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM-CA 216
           +V    +  RL E  ++++ E+T  G      T + V+   C+ G +  A ++F+EM CA
Sbjct: 225 LVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 284

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                 A +Y  ++  YCR G + EA R L  M+D     D  T T L++AFC  G    
Sbjct: 285 ----PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMG---R 337

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A+EL ++MV     P+V T T L+DGLC +G  E A  L  ++ R     P ++TY 
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR-GCPPTIYTYN 396

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ GYCK  ++ +AE L+   + +G +PNT TY  L+ G C+ G  ++A   +D +  E
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 456

Query: 397 G--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           G  C  ++  Y  I+D LC+ GR  +A +  ++  QR       T+  ++    K  + +
Sbjct: 457 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 516

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           QA  L   M+K G  P       +++A+CR   ++++++   E
Sbjct: 517 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 559



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 51/418 (12%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQ---AFELLEEMVRKGWKPNVYTHTVLIDG 305
           MLD G   D++T  +++     +G   S K       LL+E+  +G  P+      ++  
Sbjct: 1   MLDAGYPSDSSTFAVVL-----RGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAE 55

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC    T  A  LF K+        N  TY  +I   CK   ++ A  LL  MK +G+ P
Sbjct: 56  LCDARDTTTAMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNP 113

Query: 366 NT----------------------------------NTYTSLIYGHCKVGNFERAYDLMD 391
            T                                   TYT L++G  K G    A  ++ 
Sbjct: 114 GTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQ 173

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M      P+      ++  LC   RV +A EL+++   R + A+ ITY+ L+    K  
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233

Query: 452 ETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              +A+ L    + + G  PDI  Y+T+I   C+  +++++   F+E   A   PT  TY
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITY 290

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S+I GY R G++  A++   +M    CAPD ITY  L+S  CK  +LD+A + ++ M+ 
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
             +SP  VT  +L    C +G    A+ +LE + ++     I T N ++   C   +V
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQV 408



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 172/391 (43%), Gaps = 13/391 (3%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G+  +  T  V++ GL           L L  +R     P+      +++  C   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A  L ++M E G + N  TY +LI+  CK    + A  L+  M   G  P    +N
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GLC+ GR++ A  + ++        D +TYT L+    K    + A+ +   MV A
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
              PD    T ++ + C   ++ ++ +  +E +  G+     TY++++ G  +   +  A
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 527 VK-YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           V      + + G  PD +TY  +I GLCK  +L +A   +E M     +P  +T  +L  
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIG 295

Query: 586 EYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            YC+ GD   A+ +L + +D      + T  TL+   C   R+  A   F +++    + 
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355

Query: 643 DRVSLAALKNA-CYES---NKYALFSDLSQR 669
           D V+  +L +  C E    +   L  ++++R
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRR 386


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 225/438 (51%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   G ++E F ++   ++ G+     T N ++   C++G  + A++V  EM   G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A++Y  ++V  CR   + EA      M  RG + D  + + LI      G    + 
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG---HLY 414

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA     EM R G  P+   +T+LIDG C+ G    A ++  +++    +  +V TY   
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTF 473

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK++    A+ML   M E+G++P+  T+T+LI G+CK GN ++A +L + M +   
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +IDG CK G +  A EL     ++++  D I+Y  +L+         +AL 
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G+ P++    TLI  +CR   M ++ ++  + I+ G+ P   +Y ++I GYL
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ N+  A      M + G   + ITY  +++G C + K+ EA Q    MI  GI+P   
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 579 TRVTLAYEYCKQGDSATA 596
           T  +L   +  Q +   A
Sbjct: 714 TYSSLINGHVSQDNMKEA 731



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 199/413 (48%), Gaps = 39/413 (9%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           +IG+      ++IEM   GL    +T N ++   C    +  A+E+FDEM  RGV  D  
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 225 S-----------------------------------YKLMVVAYCRMGRVTEADRWLSAM 249
           S                                   Y +++  +CR G +++A +    M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L RG  +D  T    +   C K        A  L  EMV +G  P+ YT T LI G CK 
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKM---FADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KA  LF  +VR+ N KP+  TY  +I G+CK  +M RA+ L + M  + ++P+  +
Sbjct: 516 GNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +++ G C  G    A +L D M ++G  PN+   N +I G C+ G + +AYE L K  
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D  +Y  L+  +LK+A  ++A  L   M K GL  +I  Y  ++  FC + KM+
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           E+E+  ++ I  G+ P   TY+S+I G++   N+  A ++   M Q G  PD+
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 222/442 (50%), Gaps = 4/442 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +V ++ +  +L+EG      +   G+ +  +  N+++G     G V+ A E++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +  +MV A C+  +      +LS M  +G   D  T   LI A+C +G  
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL- 307

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +++AF+LL     +G +P + T+  ++ GLCK G  ++A  + +++++     PN  T
Sbjct: 308 --VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAAT 364

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++   C+ + +  A+ + + M  +G+LP+  +++SLI    + G+  +A      M 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P+   Y  +IDG C+ G + +A ++  +   R    D +TY   L+   K+    
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  LF  MV+ G+ PD + +TTLI  +C+   M ++   F+  +   L P K TY ++I
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ + G +  A + +  M +    PD+I+YG +++G C    L EA    + M+ KGI 
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 575 PCEVTRVTLAYEYCKQGDSATA 596
           P  VT  TL   YC+ GD   A
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKA 626



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 211/450 (46%), Gaps = 44/450 (9%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y L+V  Y +  ++ E       +  +G  +       L+      G+   +  A+E+  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGW---VDLAWEIYG 246

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+VR G + NVYT  ++++ LCK    E     FL  +       ++ TY  +I+ YC+E
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVM-FFLSDMEGKGVFADIVTYNTLINAYCRE 305

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  LL     +G+ P   TY +++YG CK+G ++RA D++  M + G TPN   Y
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++  +C++  + EA E+  +  +R +  D ++++ L+    +     QAL  F  M +
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 466 AGLNPDIHAYTTLIAAFCR----------------------------------QKKM-KE 490
           +G+ PD   YT LI  FCR                                  +KKM  +
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++  F E +  G+ P   T+T++I GY +DGN+  A+  F+ M +    PD +TY  LI 
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           G CK  ++  A + ++ MI K I P  ++  T+   +C  G    A+ + + + +K  IR
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK-GIR 604

Query: 611 ----TVNTLIRKLCSEKRVGMAALFFHKLL 636
               T NTLI+  C    +  A  +  K++
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 165/414 (39%), Gaps = 90/414 (21%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N+K +  + +AM+    +  +++ A+  + RM  +  +       SLI      G+    
Sbjct: 130 NFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLI 189

Query: 387 YDLM-----------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YDL+                  ++ ++G + +I A N ++ GL + G V  A+E+  +  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 430 QRELQ-----------------------------------ADKITYTILLSEHLKQAETK 454
           +  ++                                   AD +TY  L++ + ++   +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 455 QALGL----------------------FCR-------------MVKAGLNPDIHAYTTLI 479
           +A  L                       C+             M++ GL P+   Y TL+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              CR+  + E+++ F E    G+ P   +++S+I    R+G++  A+ +F+ M + G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PDN+ Y  LI G C+   L +A +  + M+ +G     VT  T     CK+   A A ++
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              + ++  +    T  TLIR  C +  +  A   F  ++  +   D+V+   L
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 207/409 (50%), Gaps = 7/409 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D  +  +++  +C MG++T     L+ +L RG   D  TL  LI   C    +G 
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC---LKGQ 144

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    ++++ +G++ N  ++  LI+G+CK G T  A +L  K +     KPNV  Y+
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQK-IDGRLTKPNVVMYS 203

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  +  TY++LIYG C  G  + A  L++ M  +
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+Y YN ++D LCK+G+V+EA  +L    +  ++ D ITY+ L+  +    E K+A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M   G+ PD+H YT LI  FC+ K + E+   F+E     + P   TY+S+I G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G I         M+  G   + ITY +LI GLCK   LD A   +  M  +GI P 
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
             T   L    CK G    A  + + L  K   L + T N +I   C +
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQ 492



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 217/437 (49%), Gaps = 39/437 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G P  T TLN ++   C  G V+ A    D++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 216 ARGVCADASSYKLMVVAYCRMGR-----------------------------------VT 240
           A+G   +  SY  ++   C++G                                    V+
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA    S M  +G   D  T + LI  FC     G +K+A  LL EMV K   PNVYT+ 
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFC---IEGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+D LCK+G  ++A  +   ++++   KP+V TY+ ++ GY    ++ +A+ +   M  
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+ +TYT LI G CK    + A +L   M ++   P I  Y+++IDGLCK GR+  
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            ++L+ +   R   A+ ITY+ L+    K     +A+ LF +M   G+ P+   +T L+ 
Sbjct: 393 VWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K++++ FQ+ +T G      TY  MI G+ + G +  A+    +M   GC P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 541 DNITYGALISGLCKQSK 557
           D +T+  +I  L K+ +
Sbjct: 513 DAVTFEIIIIALFKKDE 529



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 34/294 (11%)

Query: 280  AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            A  L   +  KG +P+++T  +LI+  C  G     F +  K+++   Y P+  T+T +I
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKR-GYHPDTITFTTLI 1003

Query: 340  SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            +G C + ++N+A    +++  QG   N  +Y +LI G CK+G+   A  L+  +      
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 400  PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            P++  YN IID LCK   V +AY L  +   + + AD +TY  L+       + K+A+GL
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 460  FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +MV   +NP++  Y  L+ A C     KE +    E+++                   
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALC-----KEGKDLLDESLSM------------------ 1160

Query: 520  DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
                        +M   GC  + +T+  +IS L ++ + D+  +    MI +G+
Sbjct: 1161 ----------LSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 9/345 (2%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +  + A  L  R++ +G+ P+  T   LI   C +G     +
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  + K G  P+    N +I GLC KG+V++A     K   +  Q ++++Y  L++  
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +T+ A+ L  ++      P++  Y+T+I A C+ + + E+   F E    G+    
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+++I G+  +G +  A+     M      P+  TY  L+  LCK+ K+ EA      
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 568 MIGKGISPCEVTRVT------LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           M+   + P  +T  T      L YE  K      AM ++        + T   LI   C 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD---VHTYTILINGFCK 351

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            K V  A   F ++  K+     V+ ++L +   +S +     DL
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 11/312 (3%)

Query: 200  ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR-----MGRVTEADRWLSAMLDRGA 254
            +L  VE     F+    RG  A A      V AY R     M   + A      +  +G 
Sbjct: 898  DLDQVEAIHVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGI 957

Query: 255  ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
              D  TL +LI  FC     G I   F +L +++++G+ P+  T T LI+GLC KG   K
Sbjct: 958  QPDLFTLNILINCFC---HMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 315  AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
            A     KL+ +  ++ N  +Y  +I+G CK      A  LL ++  +   P+   Y ++I
Sbjct: 1015 ALHFHDKLL-AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTII 1073

Query: 375  YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
               CK     +AY L   M  +G + ++  YN +I G C  G+++EA  LL K   + + 
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN 1133

Query: 435  ADKITYTILLSEHLKQAET--KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
             +  TY IL+    K+ +    ++L +  +M   G   +   +  +I+A   + +  + E
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193

Query: 493  KFFQEAITAGLF 504
            K   E I  GL 
Sbjct: 1194 KLLHEMIARGLL 1205



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 6/246 (2%)

Query: 190  TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
            TLN ++   C +G + +   +  ++  RG   D  ++  ++   C  G+V +A  +   +
Sbjct: 963  TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022

Query: 250  LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            L +G  L+  +   LI   C     G  + A +LL ++  +  KP+V  +  +ID LCK 
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCK---IGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 310  GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                KA+ LF ++        +V TY  +I G+C   K+  A  LL +M  + + PN  T
Sbjct: 1080 QLVSKAYGLFFEM-NVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138

Query: 370  YTSLIYGHCKVGN--FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            Y  L+   CK G    + +  ++  M   GC  N   +  II  L +K    +  +LL +
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHE 1198

Query: 428  AFQREL 433
               R L
Sbjct: 1199 MIARGL 1204



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 5/235 (2%)

Query: 351  AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
            A  L  R++ +G+ P+  T   LI   C +G     + ++  + K G  P+   +  +I+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 411  GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            GLC KG+V +A     K   +  Q ++++Y  L++   K  +T+ A+ L  ++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 471  DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
            D+  Y T+I A C+ + + ++   F E    G+     TY ++I G+   G +  A+   
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 531  QRMNQIGCAPDNITYGALISGLCKQSK--LDEACQFYESMIGKGISPCEVTRVTL 583
             +M      P+  TY  L+  LCK+ K  LDE+      M   G   C+   VT 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG---CKANAVTF 1176



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 3/197 (1%)

Query: 431  RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            + +Q D  T  IL++      +      +  +++K G +PD   +TTLI   C + ++ +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 491  SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
            +  F  + +  G    + +Y ++I G  + G+  +A+K  ++++     PD + Y  +I 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 551  GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
             LCK   + +A   +  M  KGIS   VT  TL Y +C  G    A+ +L  +  K    
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 609  -IRTVNTLIRKLCSEKR 624
             +RT N L+  LC E +
Sbjct: 1135 NVRTYNILVDALCKEGK 1151



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 95/215 (44%)

Query: 377  HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            H  + ++  A  L   +  +G  P+++  N +I+  C  G++   + +L K  +R    D
Sbjct: 936  HNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPD 995

Query: 437  KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             IT+T L++    + +  +AL    +++  G   +  +Y TLI   C+    + + K  +
Sbjct: 996  TITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR 1055

Query: 497  EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
            +       P    Y ++I    +   +S A   F  MN  G + D +TY  LI G C   
Sbjct: 1056 KIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVG 1115

Query: 557  KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            KL EA      M+ K I+P   T   L    CK+G
Sbjct: 1116 KLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 6/221 (2%)

Query: 156  MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
            +  +++ F  +G++   FS++ ++   G    T T   ++   C  G V  A    D++ 
Sbjct: 964  LNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLL 1023

Query: 216  ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            A+G   +  SY  ++   C++G    A + L  +  R    D      +I A C      
Sbjct: 1024 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQL-- 1081

Query: 276  SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             + +A+ L  EM  KG   +V T+  LI G C  G  ++A  L  K+V      PNV TY
Sbjct: 1082 -VSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK-TINPNVRTY 1139

Query: 336  TAMISGYCKEEK--MNRAEMLLERMKEQGLLPNTNTYTSLI 374
              ++   CKE K  ++ +  +L +M++ G   N  T+  +I
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 3/199 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F RM+     P I  +  ++ +F + K    +          G+ P   T   +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G I+       ++ + G  PD +T   LI GLC + ++ +A  F++ ++ +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK GD+  A+ +L+ +D +L    V   +T+I  LC  + V  A   
Sbjct: 162 LNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGL 221

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F ++  K  + D V+ + L
Sbjct: 222 FSEMTVKGISADVVTYSTL 240



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 3/135 (2%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  AV  F RM  +   P  I +  ++    K      A      +  KGI P  +T  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   +C  G       +L  + K+ +     T+NTLI+ LC + +V  A  F  KLL +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 639 DQNVDRVSLAALKNA 653
              +++VS   L N 
Sbjct: 159 GFQLNQVSYGTLING 173


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 186/696 (26%), Positives = 285/696 (40%), Gaps = 126/696 (18%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA---HEVM--- 156
           V A L +   +  A+SFF WA   A F+H +  Y      L++  N+ +    HE M   
Sbjct: 89  VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148

Query: 157 ---------QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                      ++ SFA   R  +  +    M          T   +V   C+ G+ E A
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 208 EEVFDEMCARGVC------------------------------------ADASSYKLMVV 231
            EVF EM A G                                       DA +Y  M+ 
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD----------------KGFR- 274
              + G   EA + L  ML +  +    T  +L+ + C                  GFR 
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 275 ---------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
                          G +K+A  L +EMV  G++P+V THTV+IDGLCK G  E+A + F
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            +++R    KPNV TYT +I G  K  ++  A  +++ M   G  P++ TY  L+ G CK
Sbjct: 389 EEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIID----------------------------- 410
           +G  + A  L+D + K   +PN+  Y+++++                             
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPG 507

Query: 411 -------GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK--QALGLFC 461
                  GLCK GR+ EA  + ++      + D  TY IL++   +  E +  +A  L  
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            + K G  PD   YT L    C+  ++  + K  +EA + G       YT++  G    G
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  AV  FQ M + G APD   Y  +I+GL K  KL++AC+F++ MIGKG  P   T  
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 582 TLAYEYCKQGDSATAMIILES-LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLG 637
            L    C  G+   A    ES L +   + +V   + LI   C   +V  A   F  ++ 
Sbjct: 688 ALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
           +      V+ A+L +    S K     +L Q +A G
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 171/396 (43%), Gaps = 46/396 (11%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEM----TNNGLPLITSTLNR---- 193
            +I++G F  +   + C++  F ++GRL E   ++ E+    ++  L L +S +N     
Sbjct: 425 GMIAHGCFPDSVTYI-CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483

Query: 194 -----------------------------VVGIACELGLVEYAEEVFDEMCARGVCADAS 224
                                        +VG+ C+ G ++ A  +F  M + G   DA+
Sbjct: 484 GSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGL-CKTGRLDEACRIFQRMVSEGCKPDAT 542

Query: 225 SYKLMVVAYCRM--GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           +Y +++   CR    RV  A   L  +   G + D  T T L    C  G    + +A +
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIG---EVDRAVK 599

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           +LEE   +GW  +V  +T L  GLC +G  ++A  LF ++VR     P+   Y  +I+G 
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG-APDAAAYCCIINGL 658

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPN 401
            K +K+  A    + M  +G  P   TYT+L+   C  GN + A+   + M   G    +
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  Y+A+I G CK  +V  A +L +    R      +T   L    ++  +T++A  L  
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            M   G  P    +T ++    +  +  +  K  QE
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 215/426 (50%), Gaps = 5/426 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   A+ GR    +    +M   G    T T   ++   C+    E A  VF  M A+G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY +++   CR  +V EA   L+ M+D G   +  T   L++  C  G    +K
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG---KLK 139

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L   MV +G  P+   + VLIDG  KKG   +A+RLF +++      P V TY ++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSL 198

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG+ ++ +  R + L + M  QG +PN  T+ +L+ G CK+G+   A+ L   M   GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++ +YN +I G+C KG+  EA  LL++  +  +  D ++Y IL+  + K      A+ 
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + K+GL PD  +Y+T+I   CR  K+  +   F++ I  G  P       ++ G  
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-CE 577
           R   ++ + + FQ M +  C P    Y  L+  LCK  + D+ C+ +  +  +G SP  E
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 578 VTRVTL 583
           +++V L
Sbjct: 439 ISKVIL 444



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 205/440 (46%), Gaps = 19/440 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++    + GR        + ML  G + +  T   L+ + C        ++A  + 
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQ---RFEEARSVF 75

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M  +G  PNV+++++LI GLC+    ++A  L  +++    ++PNV TY +++SG CK
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCK 134

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             K+  A  L  RM  +G  P+   Y  LI G  K G+   AY L + M ++GC P ++ 
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+++ G  +KG       L K   ++    +  T+  LL    K  +  +A  LF  M 
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  PD+ +Y TLI   C + K  E+++  +E I +G+ P   +Y  +I GY + G + 
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K F  + + G  PD  +Y  +I  LC+  K+  A   ++ MI  G +P     + L 
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV 374

Query: 585 YEYCKQGDSAT-------AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL-- 635
              C+ G+  T       AM+  E +     I   N L+ KLC  KR       FH+L  
Sbjct: 375 IGLCR-GERLTESCELFQAMVKFECVP---LIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 636 --LGKDQNVDRVSLAALKNA 653
                D  + +V L  L+ +
Sbjct: 431 RGFSPDVEISKVILETLRRS 450



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 4/351 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +Y     +Y  ++    K  + +        M   G +PNT TY  L+   C+   FE A
Sbjct: 12  HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEA 71

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +   M  +GC+PN+++Y+ +I GLC+  +V EA ELL +      Q + +TY  LLS 
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  + K+A+ LF RMV  G  PD   Y  LI  F ++  M E+ + F+E +  G  PT
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY S++ G+ R G        F+ M + GC P+  T+  L+ G CK   + EA + + 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
            M   G  P  V+  TL    C +G    A  +L  + +      I + N LI       
Sbjct: 252 EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
            +  A   F+++       D  S + + +  C      A F      IA G
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 4/334 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   ++G+LKE   +   M   G P      N ++    + G +  A  +F+EM  +G
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++  + R G           ML +G + +  T   L+  FC  G    + 
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG---DMV 244

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L  EM   G  P+V ++  LI G+C KG   +A RL  +++RS    P++ +Y  +
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS-GVGPDIVSYNIL 303

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K   ++ A  L   + + GL P+  +Y+++I   C+ G    A+ +   M   G 
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+      ++ GLC+  R+ E+ EL +   + E       Y +L+ +  K   +     
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +F  + + G +PD+     ++    R      +E
Sbjct: 424 IFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 7/303 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F++ G + E + +  EM   G      T N ++      G     + +F +M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G   +  ++  ++  +C+MG + EA R    M   G   D  +   LI   C K   
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK--- 275

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A  LL EM+R G  P++ ++ +LIDG  K G  + A +LF ++ +S   +P+  +
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-GLEPDAFS 334

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I   C+  K+  A ++ + M   G  P+      L+ G C+      + +L   M 
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD-KITYTILLSEHLKQAET 453
           K  C P I  YN ++  LCK  R  +  E+  +  +R    D +I+  IL  E L++++ 
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL--ETLRRSDD 452

Query: 454 KQA 456
           K A
Sbjct: 453 KDA 455


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 258/532 (48%), Gaps = 12/532 (2%)

Query: 49  SSTSSSPSPPQS--LVKTVCSMVLESYYQQF-HLRSS---PPRLNLQIDIDSLTHEQAI- 101
           SST+  P PP    L++   S   +S       L+SS   P        I S T+   I 
Sbjct: 48  SSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIE 107

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            ++  L NE G     +F+  A+      + ++L  +  + +++ G           ++ 
Sbjct: 108 NLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVS-TFNVLIK 166

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +  +  +L+    M+ EM N+GL     T   ++    E G +  A ++  +M   G   
Sbjct: 167 ALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL 226

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
              S K++V  +C+ GRV EA R++  + + G   D  T   L+  FC  G   ++  A 
Sbjct: 227 TNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG---NVNDAL 283

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ++++ M+ KG+ P+VYT+  LI G+CK G  EKA  +  +++  +   PN  TY  +IS 
Sbjct: 284 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE-CSPNTVTYNTLISA 342

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CKE ++  A  L   +  +GLLP+  T+ +LI G C   N + A ++ + M  +GC P+
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
            + Y+ +ID LC + R++EA  LLK+        + + Y  L+    K    + A  +F 
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           +M   G++     Y TLI   C+ K+++E+ +   + I  GL P K TY S++  + R G
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +I  A    Q M   GC PD  TYG LI GLC+  ++D A +   S+  KGI
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 221/429 (51%), Gaps = 7/429 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++  E +  +M   G+  D S++ +++ A C+  ++  A   L  M + G   D  T T 
Sbjct: 139 LKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTT 198

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  F ++G    +  A ++ ++M+  G      +  VL++G CK+G  E+A R  L+ V
Sbjct: 199 LMQGFIEEG---DLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLE-V 254

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             + + P+  T+ ++++G+C+   +N A  +++ M E+G  P+  TY SLI G CK+G F
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E+A +++  M    C+PN   YN +I  LCK+  ++ A +L +    + L  D  T+  L
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +           A+ +F  M   G  PD   Y+ LI + C ++++KE+    +E  ++G 
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                 Y ++I G  +   I  A + F +M  +G +  ++TY  LI GLCK  +++EA Q
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC 620
             + MI +G+ P + T  +L   +C+ GD   A  I++++     +  I T  TLI  LC
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 621 SEKRVGMAA 629
              RV +A+
Sbjct: 555 RAGRVDVAS 563



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 272/604 (45%), Gaps = 23/604 (3%)

Query: 47  AFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVAS 106
           +FSS S+   P      T+C+    + +        PP   L + +   +   +IT +  
Sbjct: 31  SFSSNSTFKFP------TLCTTPSSTTHHPL-----PPNETLLLQLTQSSSFDSITTLLK 79

Query: 107 LANEAGSMVALSFFYWAI-GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAE 165
               +GS+   + F   I  F  F     L  +    L     F+         +++  E
Sbjct: 80  QLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL----GFKPDTNFYNIALNALVE 135

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
             +LK    +  +M N G+ L  ST N ++   C+   +  A  + +EM   G+  D  +
Sbjct: 136 DNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEIT 195

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           +  ++  +   G +  A +    ML  G +L N ++ +L+  FC +G    +++A   + 
Sbjct: 196 FTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEG---RVEEALRFVL 252

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+  +G+ P+  T   L++G C+ G    A  + +  +    + P+V+TY ++ISG CK 
Sbjct: 253 EVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDI-VDFMIEKGFDPDVYTYNSLISGMCKL 311

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +  +A  +L++M  +   PNT TY +LI   CK    E A DL  ++  +G  P++  +
Sbjct: 312 GEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTF 371

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I GLC       A E+ ++   +  + D+ TY+IL+     +   K+AL L   M  
Sbjct: 372 NTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMES 431

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           +G   +   Y TLI   C+ ++++++E+ F +    G+  +  TY ++I G  ++  +  
Sbjct: 432 SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEE 491

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +   +M   G  PD  TY +L++  C+   +++A    ++M   G  P   T  TL  
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIG 551

Query: 586 EYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             C+ G    A  +L S+  K  + T    N +I+ L   KR       F +++ K    
Sbjct: 552 GLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPP 611

Query: 643 DRVS 646
           D ++
Sbjct: 612 DALT 615



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 199/421 (47%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++ +V+ F + GR++E    V+E++  G      T N +V   C +G V  A ++ D M 
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            +G   D  +Y  ++   C++G   +A   L  M+ R    +  T   LI+A C +    
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN--- 347

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            I+ A +L   +V KG  P+V T   LI GLC     + A  +F ++ ++   KP+  TY
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM-KNKGCKPDEFTY 406

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + +I   C E ++  A MLL+ M+  G   N   Y +LI G CK    E A ++ D M  
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G + +   YN +IDGLCK  RV+EA +L+ +     L+ DK TY  LL+   +  + ++
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G  PDI  Y TLI   CR  ++  + K  +     G+  T   Y  +I 
Sbjct: 527 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQ 586

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
                      ++ F+ M +    PD +T+  +  GLC     + EA  F   M+ KGI 
Sbjct: 587 ALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGIL 646

Query: 575 P 575
           P
Sbjct: 647 P 647



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 36/433 (8%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D + Y + + A     ++   +   S M++ G +LD +T  +LI A C       +
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAH---QL 174

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A  +LEEM   G KP+  T T L+ G  ++G    A ++  +++       NV +   
Sbjct: 175 RPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV-SVKV 233

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G+CKE ++  A   +  + E+G  P+  T+ SL+ G C++GN   A D++D M ++G
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++Y YN++I G+CK G  ++A E+L++   RE   + +TY  L+S   K+ E + A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   +V  GL PD+  + TLI   C  K    + + F+E    G  P + TY+ +I   
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             +  +  A+   + M   GCA + + Y  LI GLCK  ++++A + ++ M   G+S   
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT                                 NTLI  LC  KRV  A+    +++ 
Sbjct: 474 VT--------------------------------YNTLIDGLCKNKRVEEASQLMDQMIM 501

Query: 638 KDQNVDRVSLAAL 650
           +    D+ +  +L
Sbjct: 502 EGLKPDKFTYNSL 514



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 5/276 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RLKE   ++ EM ++G        N ++   C+   +E AEE+FD+M   GV   + +Y 
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C+  RV EA + +  M+  G   D  T   L+T FC  G    I++A ++++ M
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG---DIEKAGDIVQTM 534

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G +P+++T+  LI GLC+ G  + A +L L+ V+        H Y  +I      ++
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKL-LRSVQMKGIVLTPHAYNPVIQALFMRKR 593

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEGCTPNIYAYN 406
                 L   M E+   P+  T+  +  G C  G   + A D    M ++G  P   ++ 
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFG 653

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + +GLC         EL+    ++   +++ T  I
Sbjct: 654 FLAEGLCSLSMEDTLIELINMVMEKAQMSERETSMI 689



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 152/319 (47%), Gaps = 42/319 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGL 412
           LL+++K  G +PN  T+ +LI       NF    +L+ ++  E G  P+   YN  ++ L
Sbjct: 77  LLKQLKSSGSIPNATTFATLIQSFT---NFHEIENLLKILENELGFKPDTNFYNIALNAL 133

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            +  +                              LK  E      L  +MV  G+  D+
Sbjct: 134 VEDNK------------------------------LKLVEM-----LHSKMVNEGIVLDV 158

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +  LI A C+  +++ +    +E    GL P + T+T+++ G++ +G+++ A+K  ++
Sbjct: 159 STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQ 218

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC   N++   L++G CK+ +++EA +F   +  +G SP +VT  +L   +C+ G+
Sbjct: 219 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 593 SATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A+ I++ + +K +   + T N+LI  +C       A     +++ ++ + + V+   
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 650 LKNACYESNKYALFSDLSQ 668
           L +A  + N+    +DL++
Sbjct: 339 LISALCKENEIEAATDLAR 357



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 5/193 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F  +G +++   +V  M +NG      T   ++G  C  G V+ A ++   +  +G
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ A     R  E  R    M+++    D  T  ++    C+ G  G I+
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG--GPIQ 631

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +   EM+ KG  P   +   L +GLC     +    L   ++            T+M
Sbjct: 632 EAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMS---ERETSM 688

Query: 339 ISGYCKEEKMNRA 351
           I G+ K  K N A
Sbjct: 689 IRGFLKIRKFNDA 701



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 8/217 (3%)

Query: 441 TILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           T+LL   L Q+ +  ++    + +K+ G  P+   + TLI +F    +++   K  +  +
Sbjct: 60  TLLL--QLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL 117

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P    Y   +   + D  +        +M   G   D  T+  LI  LCK  +L 
Sbjct: 118 --GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLI 616
            A    E M   G+ P E+T  TL   + ++GD   A+ + + +     + T   V  L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              C E RV  A  F  ++  +  + D+V+  +L N 
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 231/463 (49%), Gaps = 21/463 (4%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M  NG+     T N ++      G +E       +M   G+  +  +Y  ++ A C+  
Sbjct: 197 DMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKK 256

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +V EA   L AM   G   +  +   +I   C KG    + +  EL+EEM  KG  P+  
Sbjct: 257 KVKEAMALLRAMAVGGVAANLISYNSVINGLCGKG---RMSEVGELVEEMRGKGLVPDEV 313

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  L++G CK+G   +   L  ++V      PNV TYT +I+  CK   ++RA  + ++
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMV-GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+ +GL PN  TYT+LI G C+ G    AY ++  M   G +P++  YNA++ G C  GR
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           VQEA  +L+   +R L  D ++Y+ +++   ++ E  +A  +   MV+ G+ PD   Y++
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C Q+K+ E+   F+E +  GL P + TYTS+I  Y  DG +S A++    M Q G
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PDN+TY  LI+GL K+++   A +    +  +   P +VT  TL  E C   +     
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL-IENCSNNE----- 606

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
                       ++V  L++  C +  +  A   F  +L ++ 
Sbjct: 607 -----------FKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 243/506 (48%), Gaps = 32/506 (6%)

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
           G + FRH    + +C++   S+  F+        +V S + +G + +  +++     +G 
Sbjct: 111 GASLFRHLHDTFHLCSSPFSSSAVFD-------LVVKSLSRLGFVPKALTLLHLANRHGF 163

Query: 185 PLITSTLNRVVGIACELGLVEY-----AEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
                + N V+          +     AE VF +M   GV  +  +Y +++      G +
Sbjct: 164 APTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDL 223

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +   ++  M   G   +  T   LI A C K     +K+A  LL  M   G   N+ ++
Sbjct: 224 EKGLGFMRKMEKEGISPNVVTYNTLIDASCKKK---KVKEAMALLRAMAVGGVAANLISY 280

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             +I+GLC KG   +   L ++ +R     P+  TY  +++G+CKE  +++  +LL  M 
Sbjct: 281 NSVINGLCGKGRMSEVGEL-VEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +GL PN  TYT+LI   CK GN  RA ++ D M   G  PN   Y  +IDG C+KG + 
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EAY++L +          +TY  L+  +      ++A+G+   MV+ GL PD+ +Y+T+I
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           A FCR++++ ++ +  +E +  G+ P   TY+S+I G      +  A   F+ M + G  
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD +TY +LI+  C   +L +A + ++ M+ +G  P                D+ T  ++
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLP----------------DNVTYSVL 563

Query: 600 LESLDKKLWIRTVNTLIRKLCSEKRV 625
           +  L+KK   +    L+ KL  E+ V
Sbjct: 564 INGLNKKARTKVAKRLLLKLFYEESV 589



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 21/455 (4%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   +V EM   GL     T N +V   C+ G +     +  EM  +G+  +  +Y
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY 350

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G ++ A      M  RG   +  T T LI  FC KG    + +A+++L E
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL---MNEAYKVLSE 407

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G+ P+V T+  L+ G C  G  ++A  +   +V      P+V +Y+ +I+G+C+E 
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER-GLPPDVVSYSTVIAGFCRER 466

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++ +A  + E M E+G+LP+T TY+SLI G C       A+DL   M + G  P+   Y 
Sbjct: 467 ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYT 526

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I+  C  G + +A  L  +  QR    D +TY++L++   K+A TK A  L  ++   
Sbjct: 527 SLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYE 586

Query: 467 GLNPDIHAYTTLI---------------AAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              PD   Y TLI                 FC +  M E+++ F+  +     P    Y 
Sbjct: 587 ESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYN 646

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G+ R GN+  A   +  +     A   +   AL+  L ++   DE  +  ++++  
Sbjct: 647 LMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRS 706

Query: 572 -GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             ++  +V +V +   + K+G+    + +L  + K
Sbjct: 707 CRLNDAKVAKVLVEVNF-KEGNMDAVLNVLTEMAK 740



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 156/335 (46%), Gaps = 21/335 (6%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             +V  +  +GR++E   ++  M   GLP    + + V+   C    +  A ++ +EM  
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV  D  +Y  ++   C   ++ EA      M+ RG   D  T T LI A+C     G 
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC---VDGE 537

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  L +EMV++G+ P+  T++VLI+GL KK  T+ A RL LKL   ++   +V TY 
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV-TYN 596

Query: 337 AMIS---------------GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +I                G+C +  MN A+ + + M ++   PN   Y  +I+GH + G
Sbjct: 597 TLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGG 656

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N  +AY+L   +       +  A  A++  L ++G   E   LL+   +     D     
Sbjct: 657 NVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAK 716

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPD--IHA 474
           +L+  + K+      L +   M K GL PD  IH+
Sbjct: 717 VLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 62/274 (22%)

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G   +A  L+ L  + G  P + +YNA++D L ++                       
Sbjct: 144 RLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSS--------------------- 182

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                 S H    + ++   +F  MV+ G++P+++ Y  +I     Q  +++   F ++ 
Sbjct: 183 ------SNHRDYDDAER---VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P   TY ++I    +   +  A+   + M   G A + I+Y ++I+GLC + ++
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM 293

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
            E  +  E M GKG+ P EVT                                 NTL+  
Sbjct: 294 SEVGELVEEMRGKGLVPDEVT--------------------------------YNTLVNG 321

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            C E  +    +   +++GK  + + V+   L N
Sbjct: 322 FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLIN 355


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 241/462 (52%), Gaps = 11/462 (2%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW-LSAMLDR 252
           +V + CEL   + A + F  M  +G+     +   M+  + ++ R+  A  W L A + R
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMA--WVLYAEMFR 220

Query: 253 GAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             I     T  +++   C +G    +K+A E +  M   G+KPNV ++  +I G   +G 
Sbjct: 221 LRISSTVYTFNIMVNVLCKEG---KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A R+ L  +R    +P+ +TY ++ISG CKE ++  A  L ++M E GL+PN  TY 
Sbjct: 278 IEGARRI-LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G+C  G+ ERA+   D M K+G  P++  YN ++  L  +GR+ EA +++K+  ++
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D ITY IL++ + +    K+A  L   M+  G+ P    YT+LI    R+ +MKE+
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +  F++ +  G+ P    + +M+ G+  +GN+  A    + M++    PD +T+  L+ G
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLW 608
            C++ K++EA    + M  +GI P  ++  TL   Y ++GD   A  + +   S+     
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + T N LI+ LC  +   +A     +++ K  + D  +  +L
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 218/430 (50%), Gaps = 4/430 (0%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M+S F ++ R++  + +  EM    +     T N +V + C+ G ++ A E    
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   +  SY  ++  Y   G +  A R L AM  +G   D+ T   LI+  C +G 
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG- 311

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +++A  L ++MV  G  PN  T+  LIDG C KG  E+AF    ++V+     P+V 
Sbjct: 312 --RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIMPSVS 368

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY  ++     E +M  A+ +++ M+++G++P+  TY  LI G+ + GN ++A+DL + M
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P    Y ++I  L ++ R++EA +L +K   + +  D I +  ++  H      
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++A  L   M +  + PD   + TL+   CR+ K++E+     E    G+ P   +Y ++
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I GY R G+I  A +    M  IG  P  +TY ALI  LCK  + D A +  + M+ KGI
Sbjct: 549 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 608

Query: 574 SPCEVTRVTL 583
           SP + T ++L
Sbjct: 609 SPDDSTYLSL 618



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 206/402 (51%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+   + G+LK+    +  M   G      + N ++      G +E A  + D M  +G
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ +Y  ++   C+ GR+ EA      M++ G + +  T   LI  +C+KG    ++
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG---DLE 349

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF   +EMV+KG  P+V T+ +L+  L  +G   +A  + +K +R     P+  TY  +
Sbjct: 350 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM-IKEMRKKGIIPDAITYNIL 408

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GY +     +A  L   M  +G+ P   TYTSLIY   +    + A DL + +  +G 
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  +NA++DG C  G V+ A+ LLK+  ++ +  D++T+  L+    ++ + ++A  
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ PD  +Y TLI+ + R+  +K++ +   E ++ G  PT  TY ++I    
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++     A +  + M   G +PD+ TY +LI G+     L E
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 212/452 (46%), Gaps = 25/452 (5%)

Query: 220 CADASSYKLMVVAYCR--------------MGRVTEADRWLSAML----DRGAILDNATL 261
           C D  SY L VV   R              MG     +R L   L    DR ++  +   
Sbjct: 101 CLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVF 160

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            LL+   C+   R +  +AF+    M  KG  P + T   ++    K    E A+ L+ +
Sbjct: 161 DLLVRVCCE--LRRA-DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + R       V+T+  M++  CKE K+ +A   +  M+  G  PN  +Y ++I+G+   G
Sbjct: 218 MFRL-RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N E A  ++D M  +G  P+ Y Y ++I G+CK+GR++EA  L  K  +  L  + +TY 
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  +  + + ++A      MVK G+ P +  Y  L+ A   + +M E++   +E    
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY  +I GY R GN   A      M   G  P ++TY +LI  L +++++ EA
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRK 618
              +E ++ +G+SP  +    +   +C  G+   A ++L+ +D+K       T NTL++ 
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            C E +V  A +   ++  +    D +S   L
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 5/199 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++S G  E  H     ++   +   R+KE   +  ++ + G+       N +V   C  G
Sbjct: 428 MLSKG-IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            VE A  +  EM  + V  D  ++  ++   CR G+V EA   L  M  RG   D+ +  
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI+ +   G RG IK AF + +EM+  G+ P + T+  LI  LCK    + A  L  ++
Sbjct: 547 TLISGY---GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603

Query: 323 VRSDNYKPNVHTYTAMISG 341
           V +    P+  TY ++I G
Sbjct: 604 V-NKGISPDDSTYLSLIEG 621


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 261/548 (47%), Gaps = 44/548 (8%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDEMCARGVCA 221
             EIG L E   ++ ++ + GL +   + N  +  IA     +E A +VF   C  G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISW 256

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           + +SY +++ + CR+G+V EA R L  M  R +  D  + + +I  +C     G +K+A 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH---LGELKKAL 313

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT---EKAFRL-------------------F 319
           +L+++M  KG KPN YT+  +I  LCK G +   EK  R                    F
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 320 LKL--VRSDN----------YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            KL  VR+ N            P+  TYT +I G+ +  K+   + L   M  +GL P+ 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYT+LI  +CK G    A+ L + M + G TPNI  Y A+IDGLCK G +  A ELL +
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ LQ +   Y  +++   K    +QA+ L   M  AG++PD   YTT+I A+CR   
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + ++ K  QE +  GL PT  T+  ++ G+   G +    +    M + G  PD ITY  
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L+   C ++ ++   + Y+ M  +G++P   T   L   +CK  +   A  + + + +K 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 608 WIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFS 664
           ++ TV   N LI++   +++   A   F ++ G     D        + CYE     +  
Sbjct: 674 YVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITL 733

Query: 665 DLSQRIAE 672
           +L     E
Sbjct: 734 NLCDEAIE 741



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 229/446 (51%), Gaps = 6/446 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S   +G++KE   ++++M          + + V+   C LG ++ A ++ D+M  +G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  +  +Y  +++  C++G+  EA++ L  M+ +  I DN   T LI  F    F+ G +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF----FKLGHV 379

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A +  +EM+ K   P+  T+T LI G  + G   +   LF +++ S   KP+  TYT 
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-SRGLKPDEVTYTT 438

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I  YCK  +M  A  L   M + G+ PN  TY +LI G CK G  + A +L+D M K+G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N+  YN++++G+CK G +++A +L+K+     +  D ITYT ++  + +  +  +A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+  GL P +  +  L+  FC    +++ ++     +  G+ P   TY +++  +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
               ++++  K ++RM   G APD+ TY  LI G CK   L EA   Y+ MI KG  P  
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
            +   L   + K+     A  + E +
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEM 704



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 197/427 (46%), Gaps = 39/427 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +  +G LK+   ++ +M   GL     T N ++ + C++G    AE+V  EM ++ 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD--------------------------- 251
           +  D   Y  ++  + ++G V  A++W   ML                            
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 252 --------RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                   RG   D  T T LI  +C  G    +  AF L  EMV+ G  PN+ T+  LI
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DGLCK G  + A  L L  +R    + NV  Y +M++G CK   + +A  L++ M+  G+
Sbjct: 476 DGLCKHGELDTANEL-LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TYT++I  +C++G+ ++A+ L+  M   G  P +  +N +++G C  G +++   
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL    ++ +  D ITY  L+ +H  +        ++ RM   G+ PD + Y  LI   C
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + + +KE+   ++E I  G  PT  +Y ++I  + +      A + F+ M   G   D  
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGE 714

Query: 544 TYGALIS 550
            Y   + 
Sbjct: 715 IYNFFVD 721



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 4/273 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G L     ++ EM   GL L     N +V   C+ G +E A ++  EM   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y  ++ AYCR+G + +A + L  MLDRG      T  +L+  FC     G ++
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC---MLGMLE 590

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               LL  M+ KG  P+  T+  L+   C +       +++ K +R+    P+ +TY  +
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY-KRMRNQGVAPDSNTYNIL 649

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK   +  A  L + M E+G +P   +Y +LI    K   F  A +L + M   G 
Sbjct: 650 IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGL 709

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
             +   YN  +D   ++G V+    L  +A ++
Sbjct: 710 VADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 4/237 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   MV+   + G +++   ++ EM   G+     T   V+   C LG ++ A ++  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+     ++ +++  +C +G + + DR L  ML++G + D  T   L+   C    R
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC---IR 621

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            S+    ++ + M  +G  P+  T+ +LI G CK    ++A+ L+ +++    Y P V +
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-GYVPTVTS 680

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           Y A+I  + K+ K   A  L E M+  GL+ +   Y   +    + G+ E   +L D
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 250/520 (48%), Gaps = 9/520 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ F +I R+ +  ++  EM  +  P I    N+++    ++     A  +   +  +G
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKG 337

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +  +++  +C MG++T     L+ +L RG      TL  LI   C    +G +K
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLC---LKGQVK 394

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A    ++++ +G++ N  ++  LI+G+CK G T  A +L L+ +     KPNV  Y+ +
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL-LRKIDGRLTKPNVEMYSTI 453

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK + ++ A  L   M  +G+  +  TY++LIYG C VG  + A  L++ M  +  
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  ++D L K+G+V+EA  +L    +  ++ D  TY  L++ +L   E K+A  
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M   G+ PD+H YT LI  FC+ K + E+   F+E     + P   TY+S++ G  
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G IS        M   G   D ITY +LI GLCK   LD+A   +  M  +GI P   
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L    CK G    A  + + L  K   L +   N +I   C +  +  A     K+
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSD-LSQRIAEGI 674
                  + V+   + NA ++ ++       L Q IA G+
Sbjct: 754 EENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 225/453 (49%), Gaps = 39/453 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G P  T TLN ++   C  G V+ A    D++ 
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 404

Query: 216 ARGVCADASSYKLMVVAYCRMGR-----------------------------------VT 240
           A+G   +  SY  ++   C++G                                    V+
Sbjct: 405 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 464

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA    S M  +G   D  T + LI  FC     G +K+A  LL EMV K   P+V T+T
Sbjct: 465 EAYGLFSEMTVKGISADVVTYSTLIYGFC---IVGKLKEAIGLLNEMVLKTINPDVRTYT 521

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+D L K+G  ++A  +   ++++   KP+V TY  +++GY    ++ +A+ +   M  
Sbjct: 522 ILVDALGKEGKVKEAKSVLAVMLKA-CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+ +TYT LI G CK    + A +L   M ++   P+   Y++++DGLCK GR+  
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            ++L+ +   R   AD ITY  L+    K     +A+ LF +M   G+ P+   +T L+ 
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLD 700

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K++++ FQ+ +T G       Y  MI G+ + G +  A+    +M + GC P
Sbjct: 701 GLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIP 760

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + +T+  +I+ L K+ + D+A +    MI +G+
Sbjct: 761 NAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 220/443 (49%), Gaps = 43/443 (9%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L+ +L RG   D  TL  LI   C    +G +K+A    ++++ +G++ N  ++  LI+G
Sbjct: 51  LTKILKRGYPPDTVTLNTLIKGLC---LKGQVKEALHFHDKLLAQGFQLNQVSYATLING 107

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           +C+ G T  A + FL+ +     KPNV  Y  +I   CK + ++ A  L   M  +G+  
Sbjct: 108 VCRIGDTRAAIK-FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  TY++LIYG C VG  + A  L+++M  +   PN+  YN ++D LCK+G+V+EA  +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
               +  ++++ ITY+ L+  +    E K+A  +F  M   G+ PD+H+Y  +I  FC+ 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD---- 541
           K++ ++   F+E I +  FP    +  ++  + +  + S+AV    R+   G  PD    
Sbjct: 287 KRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 542 -----------NITYG--------------------ALISGLCKQSKLDEACQFYESMIG 570
                       IT+G                     LI GLC + ++ +A  F++ ++ 
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGM 627
           +G    +V+  TL    CK GD+  A+ +L  +D +L    +   +T+I  LC  + V  
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 628 AALFFHKLLGKDQNVDRVSLAAL 650
           A   F ++  K  + D V+ + L
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTL 488



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 246/560 (43%), Gaps = 76/560 (13%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E+   ++ +  +   + E + +  EMT  G+     T + ++   C +G ++ A  + + 
Sbjct: 134 EMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNV 193

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  + +  +  +Y ++V A C+ G+V EA   L+ ML      +  T + L+  +     
Sbjct: 194 MVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYF---L 250

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS-------- 325
              +K+A  +   M   G  P+V+++ ++I+G CK    +KA  LF +++ S        
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310

Query: 326 ----DNY---------------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
               D++                     +P++ T   +I+ +C   ++     +L ++ +
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG----------------------- 397
           +G  P+T T  +LI G C  G  ++A    D +  +G                       
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 398 ------------CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
                         PN+  Y+ IID LCK   V EAY L  +   + + AD +TY+ L+ 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
                 + K+A+GL   MV   +NPD+  YT L+ A  ++ K+KE++      + A + P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY +++ GYL    +  A   F  M+ +G  PD  TY  LI+G CK   +DEA   +
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
           + M  K + P  VT  +L    CK G  +    +++ +  +     + T N+LI  LC  
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 623 KRVGMAALFFHKLLGKDQNV 642
             +  A   F+K+  KDQ +
Sbjct: 671 GHLDKAIALFNKM--KDQGI 688



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 216/490 (44%), Gaps = 41/490 (8%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S++ ++   G P  T TLN ++   C  G V+ A    D++ A+G   +  SY  ++  
Sbjct: 48  LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLING 107

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            CR+G    A ++L  +  R A  +      +I A C       + +A+ L  EM  KG 
Sbjct: 108 VCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQL---VSEAYGLFSEMTVKGI 164

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
             NV T++ LI G C  G  ++A  L L ++      PNV TY  ++   CKE K+  A+
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGL-LNVMVLKTINPNVCTYNILVDALCKEGKVKEAK 223

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            +L  M +  +  N  TY++L+ G+  V   ++A  + + M   G TP++++YN +I+G 
Sbjct: 224 SVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283

Query: 413 CKKGRVQEAYELLKKAF----------------------------------QRELQADKI 438
           CK  RV +A  L K+                                     + +Q D  
Sbjct: 284 CKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T  IL++      +      +  +++K G  P      TLI   C + ++K++  F  + 
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G    + +Y ++I G  + G+   A+K  ++++     P+   Y  +I  LCK   +
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
            EA   +  M  KGIS   VT  TL Y +C  G    A+ +L  +  K     +RT   L
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTIL 523

Query: 616 IRKLCSEKRV 625
           +  L  E +V
Sbjct: 524 VDALGKEGKV 533



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 164/363 (45%), Gaps = 37/363 (10%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y P+  T   +I G C + ++  A    +++  QG   N  +Y +LI G C++G+   A 
Sbjct: 59  YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAI 118

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
             +  +      PN+  YN IID LCK   V EAY L  +   + + A+ +TY+ L+   
Sbjct: 119 KFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGF 178

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
               + K+ALGL   MV   +NP++  Y  L+ A C++ K+KE++      + A +    
Sbjct: 179 CIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNV 238

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY++++ GY     +  A   F  M+ +G  PD  +Y  +I+G CK  ++D+A   ++ 
Sbjct: 239 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKE 298

Query: 568 MI----------------------------------GKGISPCEVTRVTLAYEYCKQGDS 593
           MI                                   KGI P   T   L   +C  G  
Sbjct: 299 MILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQI 358

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                +L  + K+ +     T+NTLI+ LC + +V  A  F  KLL +   +++VS A L
Sbjct: 359 TFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 418

Query: 651 KNA 653
            N 
Sbjct: 419 ING 421



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +   + E  ++  EM    +   T T + +V   C+ G + Y  ++ DEM  RG
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             AD  +Y  ++   C+ G + +A    + M D+G   +  T T+L+   C KG  G +K
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLC-KG--GRLK 709

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+ ++++ KG+  +VY + V+I G CK+G  E+A  +  K+   +   PN  T+  +
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM-EENGCIPNAVTFDII 768

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I+   K+++ ++AE LL +M  +GLL
Sbjct: 769 INALFKKDENDKAEKLLRQMIARGLL 794



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
            L   ++  +   +L +  +++K G  PD     TLI   C + ++KE+  F  + +  G
Sbjct: 34  FLPPSIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQG 93

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
               + +Y ++I G  R G+  +A+K+ ++++     P+   Y  +I  LCK   + EA 
Sbjct: 94  FQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAY 153

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKL 619
             +  M  KGIS   VT  TL Y +C  G    A+ +L  +  K     + T N L+  L
Sbjct: 154 GLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL 213

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
           C E +V  A               +  LA +  AC +SN
Sbjct: 214 CKEGKVKEA---------------KSVLAVMLKACVKSN 237


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 223/462 (48%), Gaps = 7/462 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++ I  E G    A +V+  M  + V +D  +Y + + ++CR GR   A R L  M  
Sbjct: 194 NAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPV 253

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +      ++T F +    G   +A EL +EM+     P+V T   L+  LCKKG+
Sbjct: 254 LGCFSNAVAYCTVVTGFYE---FGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGF 310

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             ++ RLF K+++     PN+ T+   I G CKE  ++RA  LL  +  +GL P+  TY 
Sbjct: 311 VLESERLFDKVLKR-GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYN 369

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G C+      A + +  M   G  PN + YN+IIDG CKKG V +A  +LK A  +
Sbjct: 370 TVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFK 429

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             + D+ TY  L++   +  +  QA+ +F   +  GL P I  Y TLI   C+Q  +  +
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E    G  P   TY  +I G  + G +S A          GC PD  TY  L+ G
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
            C+Q KLD A +    M  +G++P  +T  TL    CK   S   M I +++ +K     
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           I T NT+I  LC+ K+V  A     ++  K    D VS   L
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 244/540 (45%), Gaps = 49/540 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ F E G       +  EM    L    +T N++V   C+ G V  +E +FD++  RG
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           VC +  ++ + +   C+ G +  A R L  +   G   D  T   +I   C K     + 
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKS---RVV 382

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E L +MV  G++PN +T+  +IDG CKKG    A R+ LK      +KP+  TY ++
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRI-LKDAVFKGFKPDEFTYCSL 441

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G+C++   ++A  + +    +GL P+   Y +LI G C+ G    A  LM+ M ++GC
Sbjct: 442 VNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGC 501

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I+ YN II+GLCK G + +A  L+  A  +    D  TY  L+  + +Q +   A+ 
Sbjct: 502 KPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIE 561

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  RM   G+ PD+  Y TL+   C+  K +E  + F+     G  P   TY ++I    
Sbjct: 562 LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLC 621

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE------------------ 560
               ++ AV     M   G  PD +++G LI+G CK   LD                   
Sbjct: 622 NSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTT 681

Query: 561 ------------------ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILE 601
                             A + +  M   G  P   T   L   +CK G+       +LE
Sbjct: 682 ATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLE 741

Query: 602 SLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           +++K     + T   ++  LC E +V  A    H ++ KD   D V      N  +E++K
Sbjct: 742 NIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV------NTIFEADK 795



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 182/402 (45%), Gaps = 43/402 (10%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT-LLITAFCDKGFRGSIKQAFEL 283
           +YK M+      G+  E +  LS M      LDN  L  + + A    G +G I++A + 
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSN---LDNTLLEGVYVEAMRFYGRKGKIQEAVDT 177

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            E M      P+VY++  +++ L + G+  +A ++++++ +    + +V+TYT  I  +C
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYTIRIKSFC 236

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           +  +   A  LL  M   G   N   Y +++ G  + G+ +RA +L D M +    P++ 
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVT 296

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N ++  LCKKG V E+  L                                   F ++
Sbjct: 297 TFNKLVHALCKKGFVLESERL-----------------------------------FDKV 321

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +K G+ P++  +   I   C++  +  + +        GL P   TY ++ICG  R   +
Sbjct: 322 LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV 381

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A +   +M   G  P++ TY ++I G CK+  + +A +  +  + KG  P E T  +L
Sbjct: 382 VEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSL 441

Query: 584 AYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSE 622
              +C+ GD   AM +  + L K L   I   NTLI+ LC +
Sbjct: 442 VNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQ 483



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 47/384 (12%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRS--DNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           T   L+D  C K + +   R  L+L++     +K  + TY +M+       K N  E LL
Sbjct: 85  TDRDLVDVFCMK-YEDVCIR-NLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLL 142

Query: 356 ERMKEQGLLPNT---NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
             M+    L NT     Y   +  + + G  + A D  + M    C P++Y+YNAI++ L
Sbjct: 143 SEMRSN--LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNIL 200

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ---------------------- 450
            + G   +A+++  +   +++++D  TYTI +    +                       
Sbjct: 201 VEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNA 260

Query: 451 -------------AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
                         +  +A  LF  M++  L PD+  +  L+ A C++  + ESE+ F +
Sbjct: 261 VAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDK 320

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  G+ P   T+   I G  ++G++  AV+    +++ G  PD +TY  +I GLC++S+
Sbjct: 321 VLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSR 380

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNT 614
           + EA +    M+  G  P + T  ++   YCK+G    A  IL+    K +     T  +
Sbjct: 381 VVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK 638
           L+   C +     A   F   LGK
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGK 464


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 262/537 (48%), Gaps = 42/537 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ ++ +  +L+EG      +   G  +  +  N ++G   ++G V+ A +V+++ 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +  +  +MV A C+ G++     +LS M ++G   D  T   L+ A+C    R
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR---R 272

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +AF L++ M  KG KP ++T+  LI+GLCK+G  E+A R+  +++      PN  T
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML-GVGLCPNAAT 331

Query: 335 YTAMISGYCKEE-----------------------------------KMNRAEMLLERMK 359
           +  M+   C++E                                   ++ RA    E+MK
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             GL+P+T  YT LI G+C+  +   A  + + M + GC  ++  YN +++GLC+   + 
Sbjct: 392 GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLD 451

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A EL K+  +R +  D  T T L+  + K     +AL LF  M    L PD+  Y TL+
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             FC+  +M+++++ + + I+  +FP+  +++ +I G+   G +S A + +  M + G  
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P  +T   +I G  +   L +A  F  +MI +G+ P  +T  TL   + K+ +   A  +
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631

Query: 600 LESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + +++++  +    T N ++       R+  A +  HK++ K  N D+ +  +L N 
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 220/438 (50%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+++   G + E F +V  M   GL     T N ++   C+ G  E A+ V DEM   G
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +C +A+++  M+V  CR   V EA+R  + ML RG + D  + + ++  F   G  G   
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELG--- 381

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A    E+M   G  P+   +T+LI+G C+      A ++  ++V       +V TY  +
Sbjct: 382 RALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM-DVVTYNTL 440

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C+ + ++ A+ L + M E+G+ P+  T T+LI+G+CK GN  +A  L + M     
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN ++DG CK G +++A EL      RE+    I+++IL++         +A  
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M + G+ P +    T+I  + R   + ++  F    I+ G+ P   TY ++I  ++
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ N   A      M + G  P+ +TY A++ G  +  ++ EA      MI KGI+P + 
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680

Query: 579 TRVTLAYEYCKQGDSATA 596
           T  +L   Y  + +   A
Sbjct: 681 TYTSLINGYVSKDNMKEA 698



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 185/367 (50%), Gaps = 8/367 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     + + +VG+    G +  A   F++M   G+  D   Y +++  YCR  
Sbjct: 354 EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND 413

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNV 296
            V+ A +  + M++RG ++D  T   L+   C    RG  +  A EL +EMV +G  P+ 
Sbjct: 414 DVSGALKMRNEMVERGCVMDVVTYNTLLNGLC----RGKMLDDADELFKEMVERGVFPDF 469

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           YT T LI G CK G   KA  LF  + +RS   KP+V TY  ++ G+CK  +M +A+ L 
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRS--LKPDVVTYNTLMDGFCKVGEMEKAKELW 527

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M  + + P+  +++ LI G C +G    A+ L D M ++G  P +   N II G  + 
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G + +A + L       +  D ITY  L++  +K+    +A  L   M + GL P++  Y
Sbjct: 588 GNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTY 647

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             ++  F R  +M+E+E    + I  G+ P K TYTS+I GY+   N+  A +    M Q
Sbjct: 648 NAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707

Query: 536 IGCAPDN 542
            G  PD+
Sbjct: 708 RGFVPDD 714



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 15/127 (11%)

Query: 147 GNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           GN  +A++ +  M+S               SF +       F ++  M   GL     T 
Sbjct: 588 GNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTY 647

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++G     G ++ AE V  +M  +G+  D S+Y  ++  Y     + EA R    ML 
Sbjct: 648 NAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707

Query: 252 RGAILDN 258
           RG + D+
Sbjct: 708 RGFVPDD 714


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 241/462 (52%), Gaps = 11/462 (2%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW-LSAMLDR 252
           +V + CEL   + A + F  M  +G+     +   M+  + ++ R+  A  W L A + R
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMA--WVLYAEMFR 242

Query: 253 GAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             I     T  +++   C +G    +K+A E +  M   G+KPNV ++  +I G   +G 
Sbjct: 243 LRISSTVYTFNIMVNVLCKEG---KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A R+ L  +R    +P+ +TY ++ISG CKE ++  A  L ++M E GL+PN  TY 
Sbjct: 300 IEGARRI-LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G+C  G+ ERA+   D M K+G  P++  YN ++  L  +GR+ EA +++K+  ++
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D ITY IL++ + +    K+A  L   M+  G+ P    YT+LI    R+ +MKE+
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +  F++ +  G+ P    + +M+ G+  +GN+  A    + M++    PD +T+  L+ G
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLW 608
            C++ K++EA    + M  +GI P  ++  TL   Y ++GD   A  + +   S+     
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + T N LI+ LC  +   +A     +++ K  + D  +  +L
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 218/430 (50%), Gaps = 4/430 (0%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M+S F ++ R++  + +  EM    +     T N +V + C+ G ++ A E    
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   +  SY  ++  Y   G +  A R L AM  +G   D+ T   LI+  C +G 
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG- 333

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +++A  L ++MV  G  PN  T+  LIDG C KG  E+AF    ++V+     P+V 
Sbjct: 334 --RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIMPSVS 390

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY  ++     E +M  A+ +++ M+++G++P+  TY  LI G+ + GN ++A+DL + M
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P    Y ++I  L ++ R++EA +L +K   + +  D I +  ++  H      
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++A  L   M +  + PD   + TL+   CR+ K++E+     E    G+ P   +Y ++
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I GY R G+I  A +    M  IG  P  +TY ALI  LCK  + D A +  + M+ KGI
Sbjct: 571 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 630

Query: 574 SPCEVTRVTL 583
           SP + T ++L
Sbjct: 631 SPDDSTYLSL 640



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 206/402 (51%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+   + G+LK+    +  M   G      + N ++      G +E A  + D M  +G
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ +Y  ++   C+ GR+ EA      M++ G + +  T   LI  +C+KG    ++
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG---DLE 371

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF   +EMV+KG  P+V T+ +L+  L  +G   +A  + +K +R     P+  TY  +
Sbjct: 372 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM-IKEMRKKGIIPDAITYNIL 430

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GY +     +A  L   M  +G+ P   TYTSLIY   +    + A DL + +  +G 
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  +NA++DG C  G V+ A+ LLK+  ++ +  D++T+  L+    ++ + ++A  
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ PD  +Y TLI+ + R+  +K++ +   E ++ G  PT  TY ++I    
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++     A +  + M   G +PD+ TY +LI G+     L E
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 212/452 (46%), Gaps = 25/452 (5%)

Query: 220 CADASSYKLMVVAYCR--------------MGRVTEADRWLSAML----DRGAILDNATL 261
           C D  SY L VV   R              MG     +R L   L    DR ++  +   
Sbjct: 123 CLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVF 182

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            LL+   C+   R +  +AF+    M  KG  P + T   ++    K    E A+ L+ +
Sbjct: 183 DLLVRVCCE--LRRA-DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + R       V+T+  M++  CKE K+ +A   +  M+  G  PN  +Y ++I+G+   G
Sbjct: 240 MFRL-RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N E A  ++D M  +G  P+ Y Y ++I G+CK+GR++EA  L  K  +  L  + +TY 
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  +  + + ++A      MVK G+ P +  Y  L+ A   + +M E++   +E    
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY  +I GY R GN   A      M   G  P ++TY +LI  L +++++ EA
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRK 618
              +E ++ +G+SP  +    +   +C  G+   A ++L+ +D+K       T NTL++ 
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            C E +V  A +   ++  +    D +S   L
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 5/199 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++S G  E  H     ++   +   R+KE   +  ++ + G+       N +V   C  G
Sbjct: 450 MLSKG-IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            VE A  +  EM  + V  D  ++  ++   CR G+V EA   L  M  RG   D+ +  
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI+ +   G RG IK AF + +EM+  G+ P + T+  LI  LCK    + A  L  ++
Sbjct: 569 TLISGY---GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625

Query: 323 VRSDNYKPNVHTYTAMISG 341
           V +    P+  TY ++I G
Sbjct: 626 V-NKGISPDDSTYLSLIEG 643


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 246/523 (47%), Gaps = 11/523 (2%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL+FF W      FRH    +      L          +++  M+S       ++E    
Sbjct: 69  ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDA 128

Query: 176 VIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           +  +   G   L L     N  +       + EY  +++  +   G+  D  +Y  M++A
Sbjct: 129 IQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMA 188

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC+ G +  A R+   + + G  +D  T   L+  +C       +++A  LL  M   G 
Sbjct: 189 YCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT---SDLRKACWLLMMMPLMGC 245

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           + N Y++T+LI GL +     +A  L   +V+ D    N+H YT +I G CKE +++ A 
Sbjct: 246 RRNEYSYTILIQGLYEARCVREALVLVFMMVQ-DGCSLNLHMYTLLIKGLCKEGRIHDAR 304

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            LL+ M  +G++P+  TY ++I G+CK G  + A  +  LM + GC P+ + YN++I GL
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C  G++ EA ELL  A  R      IT+T L++ + K      AL +   M+ +    D+
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            AY  LI    ++ ++KE+++   E    GL P    YTS+I GY + G + +A++ F+ 
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC P+  TYG+LI GL +  KL +A      M   GI+P  +   TL    CK+ +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 593 SATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFF 632
              A  + E ++K       +  N L   LC   R   A  F 
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 586



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 207/433 (47%), Gaps = 8/433 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E   ++E   +V  M  +G  L       ++   C+ G +  A  + DEM  RG
Sbjct: 255 LIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRG 314

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  M+  YC+ GR+ +A    + M   G   D+ T   LI   C     G + 
Sbjct: 315 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG----GKLD 370

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL   + +G+ P V T T LI+G CK    + A R+   ++ S N K ++  Y  +
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI-SSNCKLDLQAYGVL 429

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+   K+ ++  A+  L  M   GL PN   YTS+I G+CKVG    A ++  LM  EGC
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y ++I GL +  ++ +A  L+ K  +  +    I YT L+    K+ E   A  
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFR 549

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M K GL PD  AY  L  A C+  + +E+  F    +  G+  TK TYTS++ G+ 
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 606

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN   A    ++M   GC  D  TY  L+  LCKQ KL+EA    + M   G+    V
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 579 TRVTLAYEYCKQG 591
               +  E  K+G
Sbjct: 667 AYTIIISEMIKEG 679



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 250/629 (39%), Gaps = 126/629 (20%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + GR+K+   +   M  NG      T N ++   C  G ++ AEE+ +   ARG
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC+  R+ +A R  S M+     LD     +LI     K     +K
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC---RLK 440

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A E L EM   G  PNV  +T +IDG CK G                     WT     
Sbjct: 441 EAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   P V  YT +I G CK+ + + A  L E M++ GL
Sbjct: 501 YGLIQDKKLHKAMALITKM-QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 364 LPNTN--------------------------------TYTSLIYGHCKVGNFERAYDLMD 391
            P+                                  TYTSL+ G  K GN + A  L++
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC  ++Y Y+ ++  LCK+ ++ EA  +L +     ++ + + YTI++SE +K+ 
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  LF  M+ +G  P    YT  I+++C+  +++E+E    E    G+ P   TY 
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYH 739

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPD------------------------------ 541
             I G    G +  A    +RM    C P+                              
Sbjct: 740 IFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNW 799

Query: 542 ---------------------NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
                                 +TY ++I+G CK ++L+EAC   + M+GK ISP E   
Sbjct: 800 IELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIY 859

Query: 581 VTLAYEYCKQ---GDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L    C     G   + +  +     +  + + + LI  LC E     A   F  LLG
Sbjct: 860 TMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDL 666
            D N + V+   L +   ++      S L
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQL 948



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 188/452 (41%), Gaps = 58/452 (12%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L +  +++ +M  +G+         ++   C+    + A  +F+ M   G+  D  +Y 
Sbjct: 508 KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++  A C+ GR  EA    S ++ +G +L   T T L+  F   G   +   A  L+E+M
Sbjct: 568 VLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAG---NTDFAAVLIEKM 621

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G K ++YT++VL+  LCK+    +A  +  ++  S   K N+  YT +IS   KE K
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS-GVKCNIVAYTIIISEMIKEGK 680

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A+ L   M   G  P+  TYT  I  +CK+G  E A  L+  M ++G TP++  Y+ 
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHI 740

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA---------------- 451
            I+G    G +  A+  LK+      + +  TY +LL   LK +                
Sbjct: 741 FINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWI 800

Query: 452 ETKQALGLFCRMVKAGLNPDI-----------------------------------HAYT 476
           E      L  RM+K GLNP +                                     YT
Sbjct: 801 ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYT 860

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI   C  K   +   F  + I  G  P  E+Y  +I G   +G+   A   F  +  +
Sbjct: 861 MLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               + + +  L  GL K   +D   Q   +M
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 25/318 (7%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L E  S++ +MT +G+         ++    + G  ++A+ +F+EM + G    A++Y 
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC++G++ EA+  +  M   G   D  T  + I      G  G + +AF  L+ M
Sbjct: 705 VFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGC---GHMGYMDRAFSTLKRM 761

Query: 288 VRKGWKPNVYTHTVLIDGLCKK--------------GWTE--KAFRLFLKLVRSDNYKPN 331
           V    +PN +T+ +L+    K                W E    ++L  ++++     P 
Sbjct: 762 VDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKH-GLNPT 820

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY+++I+G+CK  ++  A +LL+ M  + + PN   YT LI   C +  F +    + 
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVT 880

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P + +Y+ +I GLC +G    A  L       +   +++ + IL    LK  
Sbjct: 881 DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940

Query: 452 ETKQALGLFCRMVKAGLN 469
                   FC  + A ++
Sbjct: 941 HVD-----FCSQLLAAMD 953


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 240/486 (49%), Gaps = 13/486 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-----TSTLNRVVGIACELGLVE 205
            H+V   +V SF E    ++ F   +++  N L PL      T   N ++ +  E   ++
Sbjct: 108 GHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMK 167

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
             E V+ EM  RG+  D  ++  ++ A CR  +V  A   L  M   G   D  T T L+
Sbjct: 168 LLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLM 227

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             F ++G   SIK A  +   M+  G  P   T  VLI+G CK G  E A   +++   +
Sbjct: 228 QGFVEEG---SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALG-YIQQEIA 283

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           + ++P+  TY   ++G C+   +  A  +++ M ++G  P+  TY  ++   CK G  E 
Sbjct: 284 NGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +++ M + GC P+I  +N +I  LC   R++EA +L ++   + L  D  T+ IL++
Sbjct: 344 AKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILIN 403

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  + + AL LF  M  +G  PD   Y TLI   C   K+ ++    +E  +AG   
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPR 463

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY ++I G  +   I  A + F +M+  G + + IT+  LI GLCK  ++D+A Q  
Sbjct: 464 STVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLI 523

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
             MI +G+ P  +T  ++   YCKQGD   A  IL+++     ++ + T  TLI  LC  
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKA 583

Query: 623 KRVGMA 628
            R  +A
Sbjct: 584 GRTQVA 589



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 212/421 (50%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   NG      T N  V   C+ G V +A +V D M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y ++V   C+ G++ EA   L+ M++RG + D  T   LI A C  G R 
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC-SGNR- 375

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  ++  KG  P+VYT  +LI+ LCK G  + A RLF ++ +S    P+  TY
Sbjct: 376 -LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTY 433

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + N   +N +IDGLCK  R+ +A +L+ +     LQ + ITY  +L+ + KQ + K+
Sbjct: 494 QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+  T + Y  +I 
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  N   A+  F+ M ++G  PD  TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI 673

Query: 575 P 575
           P
Sbjct: 674 P 674



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 207/426 (48%), Gaps = 4/426 (0%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N ++   C    V  A  + +EM + GV  D +++  ++  +   G
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            +  A R  + ML+ G      T+ +LI  +C     G ++ A   +++ +  G++P+  
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCK---LGRVEDALGYIQQEIANGFEPDQI 291

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+   ++GLC+ G    A ++   +V+ + + P+V TY  +++  CK  ++  A+ +L +
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQ-EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E+G LP+  T+ +LI   C     E A DL   +  +G +P++Y +N +I+ LCK G 
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            Q A  L ++        D++TY  L+       +  +AL L   M  AG       Y T
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I   C++ +++E+E+ F +    G+     T+ ++I G  +D  I  A +   +M   G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+NITY ++++  CKQ  + +A    ++M   G     VT  TL    CK G +  A+
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590

Query: 598 IILESL 603
            +L  +
Sbjct: 591 KLLRGM 596



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           M+ EM+++G+    +T   ++    E G ++ A  V   M   G      +  +++  YC
Sbjct: 207 MLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYC 266

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           ++GRV +A  ++   +  G   D  T    +   C  G  G    A ++++ MV++G  P
Sbjct: 267 KLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG---HALKVMDVMVQEGHDP 323

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+ ++++ LCK G  E+A  +  ++V      P++ T+  +I   C   ++  A  L
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTLIVALCSGNRLEEALDL 382

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             ++  +GL P+  T+  LI   CKVG+ + A  L + M   GCTP+   YN +ID LC 
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G++ +A +LLK+          +TY  ++    K+   ++A  +F +M   G++ +   
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           + TLI   C+ K++ ++ +   + I+ GL P   TY S++  Y + G+I  A    Q M 
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
             G   D +TYG LI+GLCK  +   A +    M  KG+
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGM 601



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G KP+V T   L+  LC+      A  L L+ + S    P+  T+T ++ G+ +E
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAV-LMLEEMSSSGVAPDETTFTTLMQGFVEE 233

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +  RM E G  P   T   LI G+CK+G  E A   +      G  P+   Y
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  ++GLC+ G V  A +++    Q     D  TY I+++   K  + ++A G+  +MV+
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVE 353

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PDI  + TLI A C   +++E+    ++    GL P   T+  +I    + G+   
Sbjct: 354 RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQL 413

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     VT  T+  
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK+     A  + + +D +   R   T NTLI  LC +KR+  A     +++ +
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 192/429 (44%), Gaps = 6/429 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I+NG FE         V+   + G +     ++  M   G      T N VV   C+ G 
Sbjct: 282 IANG-FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 340

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A+ + ++M  RG   D +++  ++VA C   R+ EA      +  +G   D  T  +
Sbjct: 341 LEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNI 400

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A C     G  + A  L EEM   G  P+  T+  LID LC  G   KA  L LK +
Sbjct: 401 LINALCKV---GDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDL-LKEM 456

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S     +  TY  +I G CK+ ++  AE + ++M  QG+  N  T+ +LI G CK    
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A  L+  M  EG  PN   YN+I+   CK+G +++A ++L+       + D +TY  L
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++   K   T+ AL L   M   G+     AY  +I +  R+   +++   F+E    G 
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE 636

Query: 504 FPTKETYTSMICGYLR-DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
            P   TY  +  G  R  G+I  A  +   M   G  P+  ++  L  GL      D   
Sbjct: 637 PPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFI 696

Query: 563 QFYESMIGK 571
           +  E +I K
Sbjct: 697 RAIEIIIEK 705



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 47/345 (13%)

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL----MGKEGCTPNIYAYNAI 408
           ML   +  +   P    Y  +I    K+G    A DLM +    M +EG    +   ++ 
Sbjct: 63  MLNAALAREDFAPGPEVYEEIIR---KLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSF 119

Query: 409 IDGLCKKGRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++   ++    +A +L+         +QAD + Y  LL+  ++ ++ K    ++  M + 
Sbjct: 120 LESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGER 179

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+  + TL+ A CR  +++ +    +E  ++G+ P + T+T+++ G++ +G+I +A
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++   RM ++GC+P  +T   LI+G CK  ++++A  + +  I  G  P ++T  T    
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299

Query: 587 YCKQGDSATAMIILESL-----DKKLW--------------------------------- 608
            C+ G    A+ +++ +     D  ++                                 
Sbjct: 300 LCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPD 359

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           I T NTLI  LCS  R+  A     ++  K  + D  +   L NA
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 215/426 (50%), Gaps = 5/426 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   A+ GR    +    +M   G    T T   ++   C+    E A  VF  M A+G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY +++   CR  +V EA   L+ M+D G   +  T   L++  C  G    +K
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG---KLK 139

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L   MV +G  P+   + VLIDG  KKG   +A+RLF +++      P V TY ++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSL 198

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG+ ++ +  R + L + M  QG +PN  T+ +L+ G CK+G+   A+ L   M   GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++ +YN ++ G+C KG+  EA  LL++  +  +  D ++Y IL+  + K      A+ 
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + K+GL PD  +Y+T+I   CR  K+  +   F++ I  G  P       ++ G  
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-CE 577
           R   ++ + + FQ M +  C P    Y  L+  LCK  + D+ C+ +  +  +G SP  E
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 578 VTRVTL 583
           +++V L
Sbjct: 439 ISKVIL 444



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 19/440 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++    + GR        + ML  G + +  T   L+ + C        ++A  + 
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQ---RFEEARSVF 75

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M  +G  PNV+++++LI GLC+    ++A  L  +++    ++PNV TY +++SG CK
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCK 134

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             K+  A  L  RM  +G  P+   Y  LI G  K G+   AY L + M ++GC P ++ 
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+++ G  +KG       L K   ++    +  T+  LL    K  +  +A  LF  M 
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  PD+ +Y TL+   C + K  E+++  +E I +G+ P   +Y  +I GY + G + 
Sbjct: 255 SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K F  + + G  PD  +Y  +I  LC+  K+  A   ++ MI  G +P     + L 
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV 374

Query: 585 YEYCKQGDSAT-------AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL-- 635
              C+ G+  T       AM+  E +     I   N L+ KLC  KR       FH+L  
Sbjct: 375 IGLCR-GERLTESCELFQAMVKFECVP---LIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 636 --LGKDQNVDRVSLAALKNA 653
                D  + +V L  L+ +
Sbjct: 431 RGFSPDVEISKVILETLRRS 450



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 4/351 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +Y     +Y  ++    K  + +        M   G +PNT TY  L+   C+   FE A
Sbjct: 12  HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEA 71

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +   M  +GC+PN+++Y+ +I GLC+  +V EA ELL +      Q + +TY  LLS 
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  + K+A+ LF RMV  G  PD   Y  LI  F ++  M E+ + F+E +  G  PT
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY S++ G+ R G        F+ M + GC P+  T+  L+ G CK   + EA + + 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
            M   G  P  V+  TL    C +G    A  +L  + +      I + N LI       
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
            +  A   F+++       D  S + + +  C      A F      IA G
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 157/360 (43%), Gaps = 39/360 (10%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++ E   ++ EM + G      T   ++   C++G ++ A ++F  M  RG   D   Y 
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++  + + G + EA R    ML++G I    T   L++ F  KG  G ++  F+   +M
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK---DM 218

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL------------------------- 322
           +R+G  PN++T   L+DG CK G   +A RLFL++                         
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKP 278

Query: 323 ----------VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
                     +RS    P++ +Y  +I GY K   ++ A  L   + + GL P+  +Y++
Sbjct: 279 HEAQRLLREMIRS-GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+ G    A+ +   M   G  P+      ++ GLC+  R+ E+ EL +   + E
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                  Y +L+ +  K   +     +F  + + G +PD+     ++    R    + +E
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 7/303 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F++ G + E + +  EM   G      T N ++      G     + +F +M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G   +  ++  ++  +C+MG + EA R    M   G   D  +   L+   C K   
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK--- 275

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A  LL EM+R G  P++ ++ +LIDG  K G  + A +LF ++ +S   +P+  +
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-GLEPDAFS 334

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I   C+  K+  A ++ + M   G  P+      L+ G C+      + +L   M 
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD-KITYTILLSEHLKQAET 453
           K  C P I  YN ++  LCK  R  +  E+  +  +R    D +I+  IL  E L++++ 
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL--ETLRRSDD 452

Query: 454 KQA 456
           K+A
Sbjct: 453 KEA 455


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 227/488 (46%), Gaps = 50/488 (10%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M +  LPL   T + ++   C+ G+++ AE  F  M   G+      Y  ++  +C+ G 
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           ++ A+   + M++ G      T T LI+ +C       +++AF+L  EM  K   P+VYT
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL---QVEKAFKLYREMNEKEIAPSVYT 500

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            T LI GLC      +A +LF ++V     KP   TY  MI GYCK   M++A  LLE M
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVER-KIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              GL+P+T TY  LI G C  G    A D +D + K+    N   Y+A++ G C +GR+
Sbjct: 560 LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA     +  QR +  D + + +L+   +KQ + K+  GL  +M   GL PD   YT++
Sbjct: 620 TEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSM 679

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I A+ ++   K+S +     +T   FP   TYT+ + G  + G I  A   F++M     
Sbjct: 680 IDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANI 739

Query: 539 APDNITYGA----------------------------------LISGLCKQSKLDEACQF 564
           +P+++TYG                                   LI G CK  +L EA + 
Sbjct: 740 SPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKV 799

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
              M   GI P  +T  T+ YE+C+ GD   A+        +LW    +T++RK      
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAV--------ELW----DTMLRKGVEPDS 847

Query: 625 VGMAALFF 632
           V    L +
Sbjct: 848 VAFNLLIY 855



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 248/529 (46%), Gaps = 8/529 (1%)

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQC 158
           +A+ V  SL  +      +++    +GF + + F     +C  + +    F      +  
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDD--GICLMNEMVELGFVPTEAAVSG 328

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G +   + +V+++   G        N ++   C+   ++ AE ++  M +  
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMN 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ ++C+ G +  A+ +   M++ G          LI   C     G + 
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCK---FGDLS 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L  +M+ +G +P   T T LI G CK    EKAF+L+ ++   +   P+V+T+TA+
Sbjct: 446 AAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE-IAPSVYTFTAL 504

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C   +M  A  L + M E+ + P   TY  +I G+CK  N ++A++L++ M   G 
Sbjct: 505 IYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL 564

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y  +I GLC  GRV  A + +    ++ L+ +++ Y+ LL  +  Q    +AL 
Sbjct: 565 VPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALS 624

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
             C M++ G+N D+  +  LI    +Q+ MK      ++    GL P    YTSMI  Y 
Sbjct: 625 ASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYS 684

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G+   + +    M    C P+ +TY A ++GLCK  ++D A   +E M+   ISP  V
Sbjct: 685 KEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSV 744

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
           T         K+G+   A  +   + K L   T   N LIR  C   R+
Sbjct: 745 TYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRL 793



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 229/489 (46%), Gaps = 49/489 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G L     +  +M N GL    +T   ++   C+   VE A +++ EM  + 
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     ++  ++   C    + EA +    M++R       T  ++I  +C      ++ 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH---NMD 550

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFELLE+M+  G  P+ YT+  LI GLC  G    A + F+  +   N K N   Y+A+
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAA-KDFIDDLHKKNLKLNEMCYSAL 609

Query: 339 ISGYC-----------------------------------KEEKMNRAEMLLERMKEQGL 363
           + GYC                                   K++ M R   LL++M +QGL
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL 669

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P++  YTS+I  + K G+F+++ + +DLM  E C PN+  Y A ++GLCK G +  A  
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L +K     +  + +TY   L    K+   K+A  L   M+K GL  +   Y  LI  FC
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFC 788

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ E+ K   E    G+FP   TY+++I  + R G++ +AV+ +  M + G  PD++
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT---------LAYEYCKQGDSA 594
            +  LI G C    LD+A +    M+ +G+ P ++ ++          L +  C  G+  
Sbjct: 849 AFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVD 908

Query: 595 TAMIILESL 603
           TA+ +  S+
Sbjct: 909 TALRLYHSM 917



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++ T+ VLI GLCK G   +A  +  K +R    K +V TY  ++ G+C+ ++ +    L
Sbjct: 252 SIVTYNVLIHGLCKGGGVLEALEV-RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICL 310

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +  M E G +P     + L+ G  K GN + AYDL+  +G+ G  PN++ YNA+I+ LCK
Sbjct: 311 MNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK 370

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
              + +A  L K      L  + +TY+IL+    K+     A   F RM++ G+   I+ 
Sbjct: 371 GEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI   C+   +  +E  + + I  GL PT  T+T++I GY +D  +  A K ++ MN
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +   AP   T+ ALI GLC  +++ EA + ++ M+ + I P EVT   +   YCK  +  
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            A  +LE +     +    T   LI  LCS  RV  A  F   L  K+  ++ +  +AL
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 252/596 (42%), Gaps = 68/596 (11%)

Query: 45  QPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVV 104
            P+ SST       Q L+ T+    L   +  F        L L  +++  T   AI V 
Sbjct: 53  DPSISSTLKPHHVEQVLINTLHDSKLALRFFNF--------LGLHKNMNHTTTSFAILVH 104

Query: 105 ASLANE----AGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV 160
           A + N+    A S++       +     F  F+  +  C  S     +F         +V
Sbjct: 105 ALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDF---------LV 155

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            S+ +  R+ +   ++  M  N L     TL+ ++     +       EVFDE    GV 
Sbjct: 156 HSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVK 215

Query: 221 AD----------------------------ASSYKLMVVAY-------CRMGRVTEADRW 245
            D                            ++ + L +V Y       C+ G V EA   
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEV 275

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE----LLEEMVRKGWKPNVYTHTV 301
             ++ ++G   D  T   L+  FC         Q F+    L+ EMV  G+ P     + 
Sbjct: 276 RKSLREKGLKEDVVTYCTLVLGFCR-------VQQFDDGICLMNEMVELGFVPTEAAVSG 328

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+DGL KKG  + A+ L +KL R   + PN+  Y A+I+  CK E +++AE+L + M   
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRF-GFLPNLFVYNALINALCKGEDLDKAELLYKNMHSM 387

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            L  N  TY+ LI   CK G  + A      M ++G    IY YN++I+G CK G +  A
Sbjct: 388 NLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAA 447

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L  K     L+    T+T L+S + K  + ++A  L+  M +  + P ++ +T LI  
Sbjct: 448 EFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYG 507

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C   +M E+ K F E +   + PT+ TY  MI GY +  N+  A +  + M   G  PD
Sbjct: 508 LCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPD 567

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             TY  LISGLC   ++  A  F + +  K +   E+    L + YC QG    A+
Sbjct: 568 TYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 12/352 (3%)

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           W  N   HT+L+ G   K   EK    FL+  +   +   +  +  ++  Y +  ++  A
Sbjct: 113 WPANSLLHTLLLRGSDPKFVFEK----FLESHKQCKFSSTL-GFDFLVHSYLQNTRVFDA 167

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
            ++L  M    LLP   T ++++ G  ++  F   +++ D     G  P+ Y  +A+I  
Sbjct: 168 VVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRS 227

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LC+      A E +            +TY +L+    K     +AL +   + + GL  D
Sbjct: 228 LCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKED 287

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y TL+  FCR ++  +      E +  G  PT+   + ++ G  + GNI SA     
Sbjct: 288 VVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVV 347

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           ++ + G  P+   Y ALI+ LCK   LD+A   Y++M    +   +VT   L   +CK+G
Sbjct: 348 KLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRG 407

Query: 592 -----DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
                +S    +I + + + ++    N+LI   C    +  A   + K++ +
Sbjct: 408 MLDVAESYFGRMIEDGIRETIY--PYNSLINGHCKFGDLSAAEFLYTKMINE 457



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 164/394 (41%), Gaps = 39/394 (9%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L+L+  +   P V T +A+++G  +  K      + +     G+ P+  T +++I   C+
Sbjct: 171 LRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCE 230

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           + +F RA + +  M       +I  YN +I GLCK G V EA E+ K   ++ L+ D +T
Sbjct: 231 LKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVT 290

Query: 440 YTI----------------LLSEHL-------------------KQAETKQALGLFCRMV 464
           Y                  L++E +                   K+     A  L  ++ 
Sbjct: 291 YCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLG 350

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  P++  Y  LI A C+ + + ++E  ++   +  L     TY+ +I  + + G + 
Sbjct: 351 RFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLD 410

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A  YF RM + G       Y +LI+G CK   L  A   Y  MI +G+ P   T  TL 
Sbjct: 411 VAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLI 470

Query: 585 YEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             YCK      A  +   +++K     + T   LI  LCS   +  A+  F +++ +   
Sbjct: 471 SGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIK 530

Query: 642 VDRVSL-AALKNACYESNKYALFSDLSQRIAEGI 674
              V+    ++  C   N    F  L   +  G+
Sbjct: 531 PTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL 564


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 271/603 (44%), Gaps = 60/603 (9%)

Query: 115  VALSFFYWAIGFA--KFRHFMRLYIVCATSLISNGNFERAHEVM----QCMVSSFAEIGR 168
            +AL F  W I     + +H   +Y + A  L+    ++ A  ++    Q  + S +  G 
Sbjct: 843  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 902

Query: 169  LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD---------------- 212
            L + + +      N +P   S  + ++ +  + G+++YA E F+                
Sbjct: 903  LMDTYPLC-----NSIP---SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNM 954

Query: 213  -------------------EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
                               EM  +G+C +  ++ +++   C  G + +A   L  M + G
Sbjct: 955  ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 1014

Query: 254  AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             +    T   L+  +C KG     K A EL++ M+ KG + +V T+ V ID LC    + 
Sbjct: 1015 FVPTIVTYNTLLNWYCKKG---RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSA 1071

Query: 314  KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            KA+ L LK +R +   PN  TY  +I+G+ KE K+  A  +   M +  L PN  TY +L
Sbjct: 1072 KAY-LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 1130

Query: 374  IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            I GHC VG+FE A  L+D M   G   N   Y  +++GLCK  + + A  LL++    ++
Sbjct: 1131 IGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 1190

Query: 434  QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                I YT+L+    K     +A+ L   M K G+NPD+  Y++LI  FCR   +K +++
Sbjct: 1191 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 1250

Query: 494  FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                   +GL   K  Y+++I  + + GN++ A+K +  MN  G   D+ T   L+S LC
Sbjct: 1251 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 1310

Query: 554  KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIR 610
            +  KL EA +F   M   G+ P  +T   +   Y   GD   A    + + K        
Sbjct: 1311 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 1370

Query: 611  TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACYESNKY---ALFSDL 666
            T  +L++ LC    +  A  F ++L      VD V     L   C   N +   ALF  +
Sbjct: 1371 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 1430

Query: 667  SQR 669
             Q 
Sbjct: 1431 VQN 1433



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 224/475 (47%), Gaps = 7/475 (1%)

Query: 167  GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
            G LK+  +++ +M  NG      T N ++   C+ G  + A E+ D M  +G+ AD  +Y
Sbjct: 998  GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 1057

Query: 227  KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             + +   C   R  +A   L  M       +  T   LI  F  +G  G   Q F    E
Sbjct: 1058 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF---NE 1114

Query: 287  MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            M +    PN  T+  LI G C  G  E+A RL L  + +   + N  TY  +++G CK E
Sbjct: 1115 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRL-LDHMEAAGLRLNEVTYGTLLNGLCKHE 1173

Query: 347  KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            K   A+ LLERM+   ++     YT LI G CK G  + A  L+  M K+G  P++  Y+
Sbjct: 1174 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 1233

Query: 407  AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++I+G C+ G ++ A E++ + ++  L  +KI Y+ L+    +     +A+ ++  M   
Sbjct: 1234 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 1293

Query: 467  GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            G   D      L+++ CR  K+ E+EKF       GL P   TY  +I GY   G+  +A
Sbjct: 1294 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 1353

Query: 527  VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              +F  M + G  P   TYG+L+ GLCK   L EA +F   +     +   V   TL  E
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413

Query: 587  YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK G+   A+ + + + +   +    T ++L+  LC + +   A   F   +G+
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 1468



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 199/441 (45%), Gaps = 5/441 (1%)

Query: 152  AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
             H     ++    + G L E   +V  M  +G+     T + ++   C +G ++ A+E+ 
Sbjct: 1193 GHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252

Query: 212  DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
              M   G+  +   Y  ++  +C+ G VTEA +  + M   G   D+ T  +L+++ C  
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312

Query: 272  GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
            G  G   +A + L  M R G  PN  T+  +I+G    G    AF  F  +++   + P+
Sbjct: 1313 GKLG---EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH-PS 1368

Query: 332  VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              TY +++ G CK   +  A+  L R+       ++  Y +L+   CK GN   A  L D
Sbjct: 1369 FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD 1428

Query: 392  LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHLKQ 450
             M +    P+ Y Y++++ GLC+KG+   A  L   A  R  L  + + YT L+    K 
Sbjct: 1429 KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKA 1488

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               K A   F  M+K G  PD  A+  +I +  R+ +M ++  FF      G+ P   TY
Sbjct: 1489 GHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATY 1548

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
              ++ G+ +   +   +  +  M + G  PD +T+ +LI GL K    D   +    MI 
Sbjct: 1549 NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM 1608

Query: 571  KGISPCEVTRVTLAYEYCKQG 591
            +G    + T   L  +Y + G
Sbjct: 1609 EGTLADQFTFNILINKYSESG 1629



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 221/520 (42%), Gaps = 10/520 (1%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             C+++ +  IG     FS   +M   G      T   ++   C+ G +  A++  + +  
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397

Query: 217  RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                 D+  Y  ++   C+ G + EA      M+    + D+ T + L+T  C KG   +
Sbjct: 1398 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG--KA 1455

Query: 277  IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +         M R    PN   +T L+DGL K G  + AF  F ++++     P+   + 
Sbjct: 1456 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC-PDTVAFN 1514

Query: 337  AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            A+I    +  +M +A      M+  G+ PN  TY  L++G  K     R   L   M +E
Sbjct: 1515 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 1574

Query: 397  GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            G  P+   ++++I GL K G      +LL K       AD+ T+ IL++++ +  + ++A
Sbjct: 1575 GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKA 1634

Query: 457  LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
              L   M   G+ PD   Y  +     ++   +ES     E +  G+ P    Y ++I G
Sbjct: 1635 FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLING 1694

Query: 517  YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
              R G+I  A K    M  +G     +   A++ GL    K ++A    + M+   + P 
Sbjct: 1695 MCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPT 1754

Query: 577  EVTRVTLAYEYCKQGDSATAMI---ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
              T  TL + +C+    A A+    ++E    KL +   N LI  +C+      A   + 
Sbjct: 1755 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1814

Query: 634  KLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
            ++  +D   +  + A L +A   +N       L +DL +R
Sbjct: 1815 EMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 230/544 (42%), Gaps = 78/544 (14%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++ F  +G +K    ++  M  +GL L     + ++   C+ G V  A +V+  M   G
Sbjct: 1235 LINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNG 1294

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              AD  +  ++V + CR G++ EA+++L  M   G + ++ T   +I  +   G  G   
Sbjct: 1295 HGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY---GSIGDPL 1351

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCK------------------------------ 308
             AF   ++M++ G  P+ +T+  L+ GLCK                              
Sbjct: 1352 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 1411

Query: 309  -----KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG- 362
                  G   +A  LF K+V+ +N  P+ +TY+++++G C++ K   A  L      +G 
Sbjct: 1412 AETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 1470

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            L PN   YT L+ G  K G+ + A+   + M K+G  P+  A+NAIID   ++G++ +A 
Sbjct: 1471 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 1530

Query: 423  ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD---IHA----- 474
            +         +  +  TY ILL    K+    + L L+  M++ G+ PD    H+     
Sbjct: 1531 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 1590

Query: 475  ---------------------------YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
                                       +  LI  +    KM+++        T G+FP +
Sbjct: 1591 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 1650

Query: 508  ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            +TY  +  G  +      +      M + G  P +  Y  LI+G+C+   +  A +  + 
Sbjct: 1651 DTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 1710

Query: 568  MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKR 624
            M   G    EV    +       G +  AM++L+ + +   + T+    TL+ + C + +
Sbjct: 1711 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1770

Query: 625  VGMA 628
            +  A
Sbjct: 1771 IAEA 1774



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 167/363 (46%), Gaps = 4/363 (1%)

Query: 211  FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            F+EM  +G C D  ++  ++ +  R G++ +A+ + S M   G   + AT  +L+  F  
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            K    ++ +   L   M+R+G  P+  T   LI GL K G  +   +L  K++       
Sbjct: 1558 KQ---ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 1614

Query: 331  NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
               T+  +I+ Y +  KM +A  L+  M   G+ P+ +TY  +  G  K   F  +  ++
Sbjct: 1615 QF-TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673

Query: 391  DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
              M + G  P    Y  +I+G+C+ G +Q A++L  +       + ++  + ++   L  
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
             +T+ A+ +   M++  L P I  +TTL+  FCR  K+ E+ K        GL      Y
Sbjct: 1734 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1793

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
              +I G   +G+ ++A + ++ M      P+  TY  L+  +   + L +  +    +  
Sbjct: 1794 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853

Query: 571  KGI 573
            +G+
Sbjct: 1854 RGL 1856



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 6/197 (3%)

Query: 169  LKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
             +E   ++ EM  NG +P     +  + G+ C +G ++ A ++ DEM A G  +   +  
Sbjct: 1666 FRESTVVLHEMLENGVIPKHAQYITLINGM-CRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 228  LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             MV      G+  +A   L  ML    +   AT T L+  FC       I +A +L   M
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA---KIAEALKLKGVM 1781

Query: 288  VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
               G K +V  + VLI G+C  G +  AF L+ ++ R  +  PN+ TY  ++        
Sbjct: 1782 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM-RHRDLCPNITTYAVLVDAISAANN 1840

Query: 348  MNRAEMLLERMKEQGLL 364
            + + E LL  ++E+GL+
Sbjct: 1841 LIQGEKLLTDLQERGLI 1857


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 222/415 (53%), Gaps = 11/415 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M A+G+  D  +  +++  +C +G++  +   L  +L  G   +   L  L+   C   
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC--- 91

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G +K++    +++V +G++ +  ++ +L++GLCK G T  A +L L+ +   + +P+V
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKL-LRTIEDRSTRPDV 150

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y+ +I G CK++ ++ A  L   M  +G+ P+  TYT+LI G C  G    A+ L++ 
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +   PNIY YN +ID LCK+G+V+E+  LL    ++ ++ D + Y+IL+  +    E
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  +F  MV+ G+NPD+++Y  +I   C+ K++ E+    +E +   + P   TY+S
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G I++ +   + M+  G   + +TY +L+ GLCK   LD+A   +  M  +G
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSE 622
           I P + T   L    CK G       + + L  K     +W  TV  +I  LC E
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV--MISGLCKE 443



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 220/455 (48%), Gaps = 39/455 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++   FS++ ++   G    T  LN ++   C  G V+ +    D++ 
Sbjct: 48  LSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVV 107

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY +++   C++G    A + L  + DR    D    + +I   C      
Sbjct: 108 AQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKL-- 165

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A++L  EM  +G  P+V T+T LI G C  G   +AF L  +++   N  PN++TY
Sbjct: 166 -VDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK-NINPNIYTY 223

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CKE K+  ++ LL  M ++G+ P+   Y+ L+ G+C VG  ++A  +  +M +
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY--------------T 441
            G  P++Y+YN II+GLCK  RV EA  LL++   + +  D +TY              T
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343

Query: 442 I---------------------LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           I                     LL    K     +A+ LF +M + G+ P+ + YT LI 
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K+ +  FQ  +  G      TYT MI G  ++G    A+    +M   GC P
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + +T+  +I  L ++ + D+A +    MI KG+ P
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 4/359 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L ++M  KG  P++ T ++LI+  C  G    +F +  K+++   Y+PN      ++
Sbjct: 29  VISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKL-GYQPNTIILNTLM 87

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C + ++ ++    +++  QG   +  +Y  L+ G CK+G    A  L+  +      
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTR 147

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y+ IIDGLCK   V EAY+L  +   R +  D ITYT L+       +  +A GL
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+   +NP+I+ Y TLI   C++ K+KES+         G+ P    Y+ ++ GY  
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A + F  M Q G  PD  +Y  +I+GLCK  ++DEA      M+ K + P  VT
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L    CK G   T + + + +  +     + T N+L+  LC  + +  A   F K+
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 39/348 (11%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+  LV+ A +++ EM ARG+  D  +Y  ++  +C  G++ EA   L+ M+ +    + 
Sbjct: 161 CKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNI 220

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI   C +G    +K++  LL  M +KG KP+V  +++L+DG C  G  +KA ++
Sbjct: 221 YTYNTLIDTLCKEG---KVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI 277

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           FL +V++    P+V++Y  +I+G CK ++++ A  LL  M  + ++P+T TY+SLI G C
Sbjct: 278 FLVMVQT-GVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLC 336

Query: 379 KVG-----------------------------------NFERAYDLMDLMGKEGCTPNIY 403
           K+G                                   N ++A  L   M + G  PN Y
Sbjct: 337 KLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 396

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y A+IDGLCK GR+++   L +    +    D  TYT+++S   K+    +AL +  +M
Sbjct: 397 TYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKM 456

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              G  P+   +  +I +   + +  ++EK   E I  GL P +  ++
Sbjct: 457 EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 3/320 (0%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L ++M+ +G++P+  T + LI   C +G    ++ ++  + K G  PN    N ++ GLC
Sbjct: 32  LSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC 91

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
            KG V+++     K   +  Q D+++Y ILL+   K  ET+ A+ L   +      PD+ 
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+T+I   C+ K + E+   + E    G+FP   TYT++ICG+   G +  A      M
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 P+  TY  LI  LCK+ K+ E+      M  KG+ P  V    L   YC  G+ 
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271

Query: 594 ATA---MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A    +++        + + N +I  LC  KRV  A     ++L K+   D V+ ++L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331

Query: 651 KNACYESNKYALFSDLSQRI 670
            +   +  +     DL++ +
Sbjct: 332 IDGLCKLGRITTILDLTKEM 351



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 7/231 (3%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P I  +  I+  L K         L K+   + +  D +T +IL++      +   +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +++K G  P+     TL+   C + ++K+S  F  + +  G    + +Y  ++ G  +
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G    A+K  + +      PD + Y  +I GLCK   +DEA   Y  M  +GI P  +T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 580 RVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRV 625
             TL   +C  G    A      +IL++++  ++  T NTLI  LC E +V
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY--TYNTLIDTLCKEGKV 236


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 234/492 (47%), Gaps = 18/492 (3%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCARGVCADASSYKLMVVAYCR 235
           M +N  P ++S  + + G+A     +++  +VF   ++M   G+  D  +  +++   C 
Sbjct: 88  MYSNPTPPLSSFTHLLSGLA----KIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCN 143

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           + RV E    ++ +L RG I D  T T LI   C       I +A  L   M + G  PN
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC---MEHRISKAALLFTRMQKLGCTPN 200

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNVHTYTAMISGYCKEEKMNR 350
             T+  L+ GLC+ G    A +L  +++        N+KP V +Y+ +I   CK+ + + 
Sbjct: 201 AITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE 260

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L E MK QG+ P   +YTSLI+G C  G +E A  L + M  +G  PN+  +N +ID
Sbjct: 261 ARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK+G+V EA +LL+   QR +  + +TY  L+       +   A  LF  M   G  P
Sbjct: 321 VLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEP 380

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  YT LI  +C+  K++E+ K +   +  G  P  +TY +++ G  + G +  A K F
Sbjct: 381 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 440

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M   G   D   YG  ++GLCK   L EA + +  +    I         L    CK 
Sbjct: 441 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 500

Query: 591 GDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           G   TA  + E L ++     + T N +I + C   +V  A + F K+       D+++ 
Sbjct: 501 GKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 560

Query: 648 AALKNACYESNK 659
           A L    +ES K
Sbjct: 561 ATLIRGFFESKK 572



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 232/499 (46%), Gaps = 49/499 (9%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI 177
           SF +   G AK +H+ +++ +     +S  + +     +  +++    + R+ EG +++ 
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCC--TLNILLNCLCNVNRVGEGLAVMA 155

Query: 178 EMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            +   G +P I +    + G+ C    +  A  +F  M   G   +A +Y  ++   CR 
Sbjct: 156 GILRRGYIPDIVTYTTLIKGL-CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRT 214

Query: 237 GRVTEADRWLSAMLDRGAILD------NATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
           G ++ A +    ML+  ++          + +++I A C K  R    +A +L EEM  +
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC-KDRRED--EARDLFEEMKVQ 271

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  P V ++T LI G C  G  E+A RLF ++V +   +PNV T+  +I   CKE K+  
Sbjct: 272 GMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV-NQGVQPNVVTFNVLIDVLCKEGKVIE 330

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ LLE M ++G++PN  TY SLI G C VG+   A +L   M  +GC P++  Y  +I+
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLS---EHLKQAETKQALG--------- 458
           G CK  +V+EA +L     Q   + D  TY  LL+   +  K  + K+  G         
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 450

Query: 459 -----------------------LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
                                  LF ++    +  DI  +  LI   C+  K++ + + F
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++     L P   TY  MI  + R G +  A   FQ+M + GC PD ITY  LI G  + 
Sbjct: 511 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 570

Query: 556 SKLDEACQFYESMIGKGIS 574
            KL++  +    M+ + +S
Sbjct: 571 KKLEKVVELLHMMVQRDVS 589



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 164/364 (45%), Gaps = 12/364 (3%)

Query: 307 CKKG--WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           CK G     +AF+ F  L+   N  P + ++T ++SG  K +  ++   L  +M+  G+ 
Sbjct: 70  CKTGNITATQAFQFF-HLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T   L+   C V        +M  + + G  P+I  Y  +I GLC + R+ +A  L
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA----GLN--PDIHAYTTL 478
             +  +     + ITY  L+    +      AL L   M+      G+N  P + +Y+ +
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I A C+ ++  E+   F+E    G+ PT  +YTS+I G+   G    A + F  M   G 
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+ +T+  LI  LCK+ K+ EA    E MI +GI P  +T  +L   +C  GD  +A  
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 368

Query: 599 ILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           +  S+  K     V     LI   C   +V  A   ++ +L   +  D  +  AL    +
Sbjct: 369 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 428

Query: 656 ESNK 659
           +  K
Sbjct: 429 QGGK 432



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 164/362 (45%), Gaps = 41/362 (11%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEY 206
           NF+        ++ +  +  R  E   +  EM   G+ P + S  + + G  C  G  E 
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCG-GKWEE 295

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+ +F+EM  +GV  +  ++ +++   C+ G+V EA   L  M+ RG + +  T   LI 
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIE 355

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC     G +  A EL   M  KG +P+V  +TVLI+G CK    E+A +L+  +++  
Sbjct: 356 GFC---LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 412

Query: 327 NYKPNVHTYTAMISGY-----------------------------------CKEEKMNRA 351
             +P+V TY A+++G                                    CK   +  A
Sbjct: 413 K-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L  ++K   +  +   +  LI G CK G  E A++L + + +E   P++  YN +I  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            C+ G+V +A  L +K  +     DKITY  L+    +  + ++ + L   MV+  ++ D
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591

Query: 472 IH 473
           ++
Sbjct: 592 VN 593



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 11/265 (4%)

Query: 372 SLIYGHCKVGNFE--RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           S+   +CK GN    +A+    LM     TP + ++  ++ GL K     + + L  +  
Sbjct: 64  SMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D  T  ILL+         + L +   +++ G  PDI  YTTLI   C + ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ------IGCAPDNI 543
           ++   F      G  P   TY +++ G  R GNIS A+K  Q M        I   P  I
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ES 602
           +Y  +I  LCK  + DEA   +E M  +G++P  ++  +L + +C  G    A  +  E 
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRV 625
           +++ +   + T N LI  LC E +V
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKV 328


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 241/490 (49%), Gaps = 8/490 (1%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           F+ ++ M N+  P+     N+++    ++   + A     +M  +G+  +  ++ +++  
Sbjct: 40  FNHILHMNNHTPPIFE--FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINC 97

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           +  + ++  A   ++ +L  G   D  T+  L+   C     G +K+A    + ++RK +
Sbjct: 98  FSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLC---LNGKVKEALNFHDHVIRKRF 154

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
             +  ++  LI+GLCK G T  A +L  K+      +P+V  YTA+I  +CK++ +  A 
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L   M  + + PN  T+ SLIYG C VG  + A  L++ M      PN+Y +N +IDGL
Sbjct: 215 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+G V++A  +L    ++ ++ + +TYT L+  +    E  +A  +F  +   G+ P++
Sbjct: 275 CKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNV 334

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           H+Y+ +I   C+ K + E+ K F+E     + P   TY+S+I G  + G IS        
Sbjct: 335 HSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE 394

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +N  G   + ITY +L++GLCK  ++D+A      M  +GI P   T  TL    CK G 
Sbjct: 395 INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR 454

Query: 593 SATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A  I + L  K   L IR    +I  LC E     A     ++       D V+   
Sbjct: 455 LKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYET 514

Query: 650 LKNACYESNK 659
           L +A +++NK
Sbjct: 515 LISALFKNNK 524



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 221/448 (49%), Gaps = 38/448 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F+ + +L   FSMV ++   G    T T+N ++   C  G V+ A    D +  + 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL---DNATLTLLITAFC-DK--- 271
              D  SY  ++   C+ G    A + L  +   G +L   D    T +I +FC DK   
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVI 211

Query: 272 --------------------------GF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                                     GF   G +K+A  LL EM      PNVYT  +LI
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILI 271

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DGLCK+G  +KA  +   +++    +PNV TYT+++ GY   +++N+A+ +   +  +G+
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQ-GVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN ++Y+ +I G CK    + A  L   M  +  TPN   Y+++IDGLCK GR+ + ++
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+ +   R   A+ ITY  LL+   K  +  +A+ L  +M   G+ PD+  YTTL+   C
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++K++++ +Q+ +  G       YT MI G  ++G    A+    +M   GC PD +
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGK 571
           TY  LIS L K +K  +A +    MI +
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 166/363 (45%), Gaps = 6/363 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A   F  ++  +N+ P +  +  ++S   K      A    ++M+ +G+ P   T+  
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI     +     A+ ++  + K G  P+    N ++ GLC  G+V+EA        ++ 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL--NPDIHAYTTLIAAFCRQKKMKE 490
              D+++Y  L++   K  ET+ AL L  R ++  L   PD+  YT +I +FC+ K + +
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLL-RKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   + E I   ++P   T+ S+I G+   G +  AV     M+     P+  T+  LI 
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           GLCK+ ++ +A      MI +G+ P  VT  +L   Y    +   A  +  ++  +    
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332

Query: 611 TVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLS 667
            V++   +I  LC  K V  A   F ++  K+   + V+ ++L +   +S + +   DL 
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392

Query: 668 QRI 670
             I
Sbjct: 393 DEI 395



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 39/309 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMT-NNGLPLI-------------------TSTLNRVVGIA 198
           ++  F  +G+LKE   ++ EM+ NN  P +                   TS L+ ++   
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 199 CELGLVEY---------------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
            E  +V Y               A+ VF+ +  RGV  +  SY +M+   C+   V EA 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +    M  +    +  T + LI   C  G    I   ++L++E+  +G   N+ T+  L+
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSG---RISDVWDLIDEINNRGQPANIITYNSLL 411

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           +GLCK    +KA  L  K+ + +  +P++ TYT ++ G CK  ++  A+ + + +  +G 
Sbjct: 412 NGLCKNHQVDKAIALLTKM-KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N   YT +I G CK G F+ A  L+  M   GC P+   Y  +I  L K  +  +A +
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVK 530

Query: 424 LLKKAFQRE 432
           LL++   RE
Sbjct: 531 LLREMIARE 539


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 233/476 (48%), Gaps = 10/476 (2%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M ++G      T N ++   C+    + A+E+F+ M +        +Y  ++    R G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A      MLDR +  D  +  +L+T  C  G    I+ A E   +M  +   PNV T
Sbjct: 61  LERAMALFQEMLDRRS-HDVISFNILVTGLCRAG---KIETALEFFRKMDDR-CSPNVIT 115

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           ++VLIDGLCK     +A  L L+ +++    P+V TYT ++ G CKE K+  A  +L  M
Sbjct: 116 YSVLIDGLCKANRVSQAVEL-LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 174

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            + G +PN  TY SL++G C+      A  LM  M   GCTPN+  Y  +IDGLCK GRV
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 234

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  +L     +    D + Y +L++   K  +  +++ L  R V  G+ PD+  Y+++
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 294

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   CR  ++ E+ +      + G  P    Y+++I G  + G +  A   ++ M   GC
Sbjct: 295 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             D +TY  LI GLCK  ++DEA      M+  G  P  +T  +L    C       A+ 
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414

Query: 599 ILESLDKKLWIR---TVNTLIRKLCSEKRVGMAAL-FFHKLLGKDQNVDRVSLAAL 650
           ++E +++        T N LI  +C  +RV  AAL +F +++      D ++ + L
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 204/413 (49%), Gaps = 8/413 (1%)

Query: 151 RAHEVM--QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           R+H+V+    +V+     G+++       +M +   P + +    + G+ C+   V  A 
Sbjct: 75  RSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGL-CKANRVSQAV 133

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+ + M ARG   D  +Y ++V   C+  +V  A   L  MLD G + +  T   L+   
Sbjct: 134 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 193

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +  R  +  A  L+ +M  +G  PNV T+  LIDGLCK G  + A  +   ++     
Sbjct: 194 C-RARR--VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG- 249

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P++  Y  +I+G CK ++++ +  LL R    G+ P+  TY+S+IYG C+    + A  
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  +   GC P++  Y+ +IDGLCK G+V EA++L +        AD +TY+ L+    
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K     +A  L  RMV+ G  P    Y +LI   C    + E+ +  +E   +   P+  
Sbjct: 370 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429

Query: 509 TYTSMICGYLRDGNI-SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           TY  +I G  R   + S+A+ YFQ M   G  PD+ITY  L+ GL K   L E
Sbjct: 430 TYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 482



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 5/268 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++GR+K+  +M+ +M + G        N ++   C+   V+ +  +     + G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   CR  R+ EA R L  +  RG   D    + LI   C     G + 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA---GKVD 340

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+L E M   G   +V T++ LIDGLCK G  ++A  L  ++VR     P+  TY ++
Sbjct: 341 EAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM-GTPPSTMTYNSL 399

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER-AYDLMDLMGKEG 397
           I G C    ++ A  L+E M+     P+  TY  LI+G C++   +  A D    M   G
Sbjct: 400 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG 459

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELL 425
             P+   Y+ +++GL K   + E   L+
Sbjct: 460 VIPDHITYSILLEGLKKSKDLHELRHLV 487



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E   +++ + + G P      + ++   C+ G V+ A ++++ M   G  AD  +Y 
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYS 362

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C+ GRV EA   L+ M+  G      T   LI   CD      + +A EL+EEM
Sbjct: 363 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH---LDEAIELVEEM 419

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            R    P+  T+ +LI G+C+    + A   + + +  +   P+  TY+ ++ G  K + 
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 479

Query: 348 MNRA-EMLLERMKEQG 362
           ++    ++L++M + G
Sbjct: 480 LHELRHLVLDQMVQLG 495


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 225/442 (50%), Gaps = 10/442 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G L+E  S+  EM + G      T N ++   C+   +  A E F EM   G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A+C+ G +  A + L  M   G + +  T T LI A C  G   ++ 
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAG---NLT 387

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW---TEKAFRLFLKLVRSDNYKPNVHTY 335
           +A++LL +M++ G K N+ T+T L+DGLCK G     E+ FR  LK    D   PN   Y
Sbjct: 388 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK----DGISPNQQVY 443

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           TA++ GY K E+M  A  +L++M E  + P+   Y S+I+GHC     E    +++ M  
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G + N      IID   K G+  +A    ++     ++A  +TY +L+    +    + 
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVEL 563

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+  FCRM+  GL P++  YT+LI   C    ++ ++K F E    G+ P    +T++I 
Sbjct: 564 AVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G L+ GN+  A+    RM ++    D   Y +L+SG  +  +L +A +F+  MI KGI P
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
            EV  + L  EY K+G    A+
Sbjct: 684 EEVLCICLLREYYKRGQLDEAI 705



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 257/564 (45%), Gaps = 49/564 (8%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
           +AL FF WA     FRH    Y +    +     +  AH+ ++ ++ +     R+  GF 
Sbjct: 86  LALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMN----SRMDMGFP 141

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS-YKLMVVAY 233
           +      N   ++ ST                          R +C   S  + ++   +
Sbjct: 142 VC-----NIFDMLWST--------------------------RNICVSGSGVFDVLFSVF 170

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
             +G + EA+   S M +   +    +   L+      G  G + + F    +M+  G  
Sbjct: 171 VELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSG-NGQLVRKF--FNDMIGAGIA 227

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V+T+ V+ID LCK+G  E + RLF+++ R     P+V TY ++I GY K   +     
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQM-REMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L   MK+ G +P+  TY  LI  +CK     RA++    M   G  PN+  Y+ +ID  C
Sbjct: 287 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFC 346

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+G +Q A +LL    +  L  ++ TYT L+  + K     +A  L   M++AG+  +I 
Sbjct: 347 KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YT L+   C+  +M E+E+ F+  +  G+ P ++ YT+++ GY++   +  A+K  ++M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            +    PD I YG++I G C Q KL+E     E M  +GIS   V   T+   Y K G S
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           + A+   + +     +  I T   LI  LC    V +A  +F ++L      +     +L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586

Query: 651 -----KNACYESNKYALFSDLSQR 669
                 N C ES K  LF ++  R
Sbjct: 587 IDGLCXNNCIESAK-KLFDEMQCR 609



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 193/414 (46%), Gaps = 39/414 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + +  ++   F    EM NNGL     T + ++   C+ G+++ A ++  +M   G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C+ G +TEA + L+ ML  G  L+  T T L+   C  G    + 
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG---RMI 422

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+   M++ G  PN   +T L+ G  K    E A ++ LK +   N KP++  Y ++
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI-LKQMTECNIKPDLILYGSI 481

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPN-------------------------------- 366
           I G+C + K+   +++LE MK +G+  N                                
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541

Query: 367 ---TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                TY  LI G C+ G  E A D    M   G  PN+  Y ++IDGLC    ++ A +
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK 601

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   R +  D   +T L+  +LK    ++AL L  RM +  +  D+H YT+L++ F 
Sbjct: 602 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 661

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +  ++ ++ KFF E I  G+ P +     ++  Y + G +  A++    M ++ 
Sbjct: 662 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 212/467 (45%), Gaps = 47/467 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G ++ A+  FDEM ++ +  +     +++   C+  R  +A R   AM   G + D 
Sbjct: 20  CRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADT 79

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK--------- 309
              T L++    +     + QA  +L EM   G +PNV T+  LIDGLCK          
Sbjct: 80  VIYTALLSGLWKEK---RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQEL 136

Query: 310 --------------------------GWTEKAFRLFLKLVR------SDNYKPNVHTYTA 337
                                     G  E+A  LF +++        D   PNV TY+ 
Sbjct: 137 FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSV 196

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  ++++A  LLE MK +G  P+  TYT L+ G CK      A++++  M   G
Sbjct: 197 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 256

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  YN+++ GLC+  RV +A  L++    R    + +TY  L+    K    K A 
Sbjct: 257 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 316

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   M+  G  PD+  Y  LI   C+  ++ ES    + A++ G+ P   TY+S+I G 
Sbjct: 317 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 376

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R   +  A +    +   GC PD I Y  LI GLCK  K+DEA   YE M G G     
Sbjct: 377 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADV 436

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           VT  TL    CK G    A ++L  + +        T N+LI+ LC 
Sbjct: 437 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 211/442 (47%), Gaps = 22/442 (4%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L   G  ERA  + Q M+   +             +M +   P + +    + G+ C+  
Sbjct: 159 LFRTGKLERAMALFQEMLDRRSH------------DMDDRCSPNVITYSVLIDGL-CKAN 205

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V  A E+ + M ARG   D  +Y ++V   C+  +V  A   L  MLD G + +  T  
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+   C +  R  +  A  L+ +M  +G  PNV T+  LIDGLCK G  + A  +   +
Sbjct: 266 SLLHGLC-RARR--VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 322

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +      P++  Y  +I+G CK ++++ +  LL R    G+ P+  TY+S+IYG C+   
Sbjct: 323 IDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 381

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L+  +   GC P++  Y+ +IDGLCK G+V EA++L +        AD +TY+ 
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST 441

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  L  RMV+ G  P    Y +LI   C    + E+ +  +E   + 
Sbjct: 442 LIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 501

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQR-----MNQIGCAPDNITYGALISGLCKQSK 557
             P+  TY  +I G  R   + SAV   ++     +   G A D I Y +LI GLCK  +
Sbjct: 502 CAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGR 561

Query: 558 LDEACQFYESMIGKGISPCEVT 579
           + EA  +++ MI  G+ P  +T
Sbjct: 562 VAEALDYFQEMIDNGVIPDHIT 583



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 222/479 (46%), Gaps = 35/479 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   +  RL +  +++ EM ++G      T N ++   C+    + A+E+F+ M +  
Sbjct: 85  LLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE 144

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++    R G++  A      MLDR +               D   R S  
Sbjct: 145 CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH--------------DMDDRCS-- 188

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                          PNV T++VLIDGLCK     +A  L L+ +++    P+V TYT +
Sbjct: 189 ---------------PNVITYSVLIDGLCKANRVSQAVEL-LESMKARGCSPDVITYTIL 232

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE K+  A  +L  M + G +PN  TY SL++G C+      A  LM  M   GC
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  Y  +IDGLCK GRV++A  +L     +    D + Y +L++   K  +  +++ 
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  R V  G+ PD+  Y+++I   CR  ++ E+ +      + G  P    Y+++I G  
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A   ++ M   GC  D +TY  LI GLCK  ++DEA      M+  G  P  +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           T  +L    C       A+ ++E +++        T N LI  +C  +RV  A +   +
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 192/382 (50%), Gaps = 14/382 (3%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T   L+  FC +G  G I QA    +EM  K   PNV+  ++LIDGLCK   +  A 
Sbjct: 8   DVYTYAALLRGFC-RG--GEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           R F + ++      +   YTA++SG  KE+++++A  +L  M++ G  PN  TY SLI G
Sbjct: 65  RCF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR----- 431
            CK    +RA +L + M    C+P++  YN ++DGL + G+++ A  L ++   R     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 432 --ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
                 + ITY++L+    K     QA+ L   M   G +PD+  YT L+   C++ K+ 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +  +E + AG  P   TY S++ G  R   +S A+   + M   GC P+ +TYG LI
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKK 606
            GLCK  ++ +AC     MI KG +P  +    L    CK      ++ +L    S   K
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 607 LWIRTVNTLIRKLCSEKRVGMA 628
             + T +++I  LC   R+  A
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEA 385



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 195/407 (47%), Gaps = 9/407 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  R+ +   ++  M   G      T   +V   C+   V  A EV  EM   G
Sbjct: 197 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 256

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   CR  RV++A   +  M  RG   +  T   LI   C  G    +K
Sbjct: 257 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG---RVK 313

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L +M+ KG  P++  + +LI+GLCK    +++  L  + V S   KP+V TY+++
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSV 372

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+  +++ A  LL  +K +G  P+   Y++LI G CK G  + A+DL ++M  +GC
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  Y+ +IDGLCK GRV EA+ LL +  +       +TY  L+          +A+ 
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-----ITAGLFPTKETYTSM 513
           L   M ++   P    Y  LI   CR +++  +    ++A        G       Y+S+
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           I G  + G ++ A+ YFQ M   G  PD+ITY  L+ GL K   L E
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 10/281 (3%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY +L+ G C+ G  ++A    D M  +   PN++  + +IDGLCK  R  +A   
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +      + AD + YT LLS   K+    QAL +   M   G  P++  Y +LI   C+
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-------NQIG 537
             +   +++ F+   +    P+  TY +++ G  R G +  A+  FQ M           
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C+P+ ITY  LI GLCK +++ +A +  ESM  +G SP  +T   L    CK+   A A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 598 IIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +L E LD      + T N+L+  LC  +RV  A      +
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 287



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 42/306 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++GR+K+  +M+ +M + G        N ++   C+   V+ +  +     + G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   CR  R+ EA R L  +  RG   D    + LI   C  G    + 
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG---KVD 418

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-------------- 324
           +AF+L E M   G   +V T++ LIDGLCK G  ++A  L  ++VR              
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478

Query: 325 --------------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ--- 361
                                 N  P+  TY  +I G C+ E+++ A +LLE+ K +   
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVA 538

Query: 362 --GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G   +T  Y+SLI G CK G    A D    M   G  P+   Y+ +++GL K   + 
Sbjct: 539 AGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598

Query: 420 EAYELL 425
           E   L+
Sbjct: 599 ELRHLV 604


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 7/469 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P  TS  ++++G    +G    A  +F ++ ++G+    +++ +++  Y        A  
Sbjct: 52  PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L+ +L  G   +  T   +I  FC     G I +A +  + ++ +G+  + +T+  LI+
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFC---INGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GL K G  + A  L  ++ +S + +PN+  Y+A+I G CK+  ++ A  L  ++ E+G+L
Sbjct: 169 GLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            +  TY SLI G C VG ++    L+  M +E   P+ Y +N +ID LCK+GR+ EA  +
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGV 287

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    +R  + D +TY  L+  +  +    +A  LF RMVK GL PD+  Y  LI  +C+
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K + E+   F+E     L PT  +Y S+I G    G IS   K    M+     PD +T
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  LI  LCK+ ++ EA      M+ KG+ P  VT   +   YC + +   A  I   + 
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 605 K---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K   +  I   N LI   C  + V  A + F ++  K+   D  S  +L
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 247/519 (47%), Gaps = 16/519 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  ++ G++K    ++ EM  + +       + ++   C+ G V  A  +  ++  RG
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y  ++   C +GR  E  + L+ M+      D+ T  +LI A C +   G I 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE---GRIL 282

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L  M ++G KP++ T+  L++G C +    +A  LF ++V+    +P+V  Y  +
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR-GLEPDVLNYNVL 341

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK + ++ A +L + +  + L+P   +Y SLI G C  G       L+D M     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN +ID LCK+GR+ EA  +L    ++ ++ + +TY  ++  +  +     A  
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F RMVK+GL PDI  Y  LI  +C+ + + E+   F+E     L P   +Y S+I G  
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G I    +    M   G +PD ITY  L+   CK    D+A   +  ++ +GI P   
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFY 580

Query: 579 TRVTLAYEYC-----KQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           T   +    C     K  + A   +++        ++T   LI  LC +   G A L   
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN--VQTYTILINALCKDGSFGEAMLLLS 638

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           K+   D+  D ++   +     + N+    +D ++++ E
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNE----TDKAEKLRE 673



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 206/415 (49%), Gaps = 5/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + GR+ E   ++  M+  G      T N ++   C    V  A E+F+ M  RG
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++  YC+   V EA      + ++  +   A+   LI   C+ G    +K
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   LL+EM      P+V T+ +LID LCK+G   +A  + + +++    KPN+ TY AM
Sbjct: 391 K---LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAM 446

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC    +N A+ +  RM + GL P+   Y  LI G+CK    + A  L   M  +  
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I +YN++IDGLC  GR+    ELL +        D ITY ILL    K     +A+ 
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF R +  G+ PD +    ++   C+ +K+K +E   +  +  G  P  +TYT +I    
Sbjct: 567 LF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +DG+   A+    +M      PD IT+  +I  L ++++ D+A +  E MI +G+
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 223/492 (45%), Gaps = 37/492 (7%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            FS++  +  +G      T N ++   C  G++  A +    + A+G   D  +Y  ++ 
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGF-------------RGSI 277
              + G++  A   L  M ++ ++  N  + + LI   C  GF             RG +
Sbjct: 169 GLSKNGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227

Query: 278 KQAF-------------------ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             A                    +LL +MVR+   P+ YT  +LID LCK+G   +A + 
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA-QG 286

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++     KP++ TY A++ GYC  E ++ A  L  RM ++GL P+   Y  LI G+C
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K    + A  L   +  +   P I +YN++IDGLC  GR+    +LL +        D +
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL+    K+    +ALG+   M+K G+ P+I  Y  ++  +C +  +  ++  F   
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + +GL P    Y  +I GY +   +  A+  F+ M      PD  +Y +LI GLC   ++
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLI 616
               +  + M   G SP  +T   L   +CK      A+ +   + + +W    T + ++
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586

Query: 617 RKLCSEKRVGMA 628
             LC  +++ MA
Sbjct: 587 DNLCKGEKLKMA 598



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 3/311 (0%)

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+   ++ A     RM      P T+ +  L+    ++G++  A  L   +  +G +P+I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             +  +I+    +     A+ LL    +   Q + +T+  +++         +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           ++  G   D   Y TLI    +  ++K +    QE   + + P    Y+++I G  +DG 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +S A+    ++ + G   D +TY +LI G C   +  E  Q    M+ + + P + T   
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 583 LAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L    CK+G    A  +L  + K   K  I T N L+   CS + V  A   F++++ + 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 640 QNVDRVSLAAL 650
              D ++   L
Sbjct: 331 LEPDVLNYNVL 341



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 11/304 (3%)

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           + +C+  N + A    + M +    P    ++ ++  + + G    A  L  +   + + 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
               T+TIL++ +  Q+ T  A  L   ++K+G  P++  + T+I  FC    + ++  F
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            Q  +  G    + TY ++I G  ++G I +A+   Q M +    P+ + Y ALI GLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMI---ILESLDKKLWI 609
              + +A      +  +GI    VT  +L    C  G     T ++   + E++D   + 
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY- 266

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKY---ALFSD 665
            T N LI  LC E R+  A      +  + +  D V+  AL    C   N +    LF+ 
Sbjct: 267 -TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 666 LSQR 669
           + +R
Sbjct: 326 MVKR 329



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 5/206 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + +   + E   +  EM +  L    ++ N ++   C LG + + +E+ DEMC  G
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++ A+C+     +A      +++ G   D  T   ++   C KG +  +K
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLC-KGEK--LK 596

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A + L+ ++  G  PNV T+T+LI+ LCK G   +A  L  K+  +D   P+  T+  +
Sbjct: 597 MAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR-PPDAITFEII 655

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I    +  + ++AE L E M  +GL+
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 261/538 (48%), Gaps = 42/538 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F +  +L+E +     + + G  +     N ++G    +G VE A  ++ E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  +  +  +MV A C+ G++ +   +LS + ++G   D  T   LI+A+  +G  
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL- 275

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-------- 326
             +++AFEL+  M  KG+ P VYT+  +I+GLCK G  E+A  +F +++RS         
Sbjct: 276 --MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 327 --------------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                                     +  P++  +++M+S + +   +++A M    +KE
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            GL+P+   YT LI G+C+ G    A +L + M ++GC  ++  YN I+ GLCK+  + E
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +  +R L  D  T TIL+  H K    + A+ LF +M +  +  D+  Y TL+ 
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            F +   +  +++ + + ++  + PT  +++ ++      G++S A + +  M      P
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
             +   ++I G C+     +   F E MI +G  P  ++  TL Y + K+ + + A  ++
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633

Query: 601 ESLDKKLW-----IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + +++K       + T N+++   C E ++  A     K++ +  N DR +  +L N 
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLING 691



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 222/440 (50%), Gaps = 6/440 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+++  G ++E F ++  M + G      T N V+   C+ G  E A+EVF EM   G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+++Y+ +++  C+ G   E +   S M  R  + D    + +++ F   G   ++ 
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG---NLD 382

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A      +   G  P+   +T+LI G C+KG   +A  L  ++++      +V TY  +
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ-GCAMDVVTYNTI 441

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK + +  A+ L   M E+GL P++ T T LI GHCK+GN + A +L   M ++  
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  YN ++DG  K G +  A E+      +E+    I+++IL++    +    +A  
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M+   + P +    ++I  +CR     + E F ++ I+ G  P   +Y ++I G++
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621

Query: 519 RDGNISSAVKYFQRM--NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           ++ N+S A    ++M   Q G  PD  TY +++ G C+++++ EA      MI +G++P 
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPD 681

Query: 577 EVTRVTLAYEYCKQGDSATA 596
             T  +L   +  Q +   A
Sbjct: 682 RSTYTSLINGFVSQDNLTEA 701



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 217/446 (48%), Gaps = 18/446 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI------- 277
           S   M+    R GR+++A   +  M+ R  +     +  L++ + + G   S+       
Sbjct: 105 SLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRT 164

Query: 278 -------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                  ++A+E    +  KG+  ++     LI  L + GW E A+R++ ++ RS     
Sbjct: 165 FVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS-GVGV 223

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV+T   M++  CK+ KM +    L  ++E+G+ P+  TY +LI  +   G  E A++LM
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M  +G +P +Y YN +I+GLCK G+ + A E+  +  +  L  D  TY  LL E  K+
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 343

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +  +   +F  M    + PD+  ++++++ F R   + ++  +F     AGL P    Y
Sbjct: 344 GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 403

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T +I GY R G IS A+     M Q GCA D +TY  ++ GLCK+  L EA + +  M  
Sbjct: 404 TILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 463

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGM 627
           +G+ P   T   L   +CK G+   AM + + + +   KL + T NTL+        +  
Sbjct: 464 RGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDT 523

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
           A   +  ++ K+     +S + L NA
Sbjct: 524 AKEIWADMVSKEILPTPISFSILVNA 549



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/379 (20%), Positives = 158/379 (41%), Gaps = 55/379 (14%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N+K    + +AMI    +  +++ A+  + RM  +  +       SL+  +   G+ +  
Sbjct: 98  NFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSV 157

Query: 387 YDLM---------------------------------DLMG------------------- 394
           +DL+                                  L+G                   
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   N+Y  N +++ LCK G++++    L +  ++ +  D +TY  L+S +  Q   +
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   M   G +P ++ Y T+I   C+  K + +++ F E + +GL P   TY S++
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G+       F  M      PD + + +++S   +   LD+A  ++ S+   G+ 
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  V    L   YC++G  + AM +   + ++   + + T NT++  LC  K +G A   
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F+++  +    D  +L  L
Sbjct: 458 FNEMTERGLFPDSYTLTIL 476


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 232/462 (50%), Gaps = 12/462 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+     T   V+   C +  V+ A  +  +M   G   +A  Y+ ++ A  ++G
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV E  + L  ML  G I D  T    I   C K  R  I +A +L++ M+ +G+ PN +
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC-KMLR--IHEAAKLVDRMLLRGFTPNSF 323

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL-E 356
           T+ VL+ GLC+ G  ++A R+ L  V +    PNV  +  +I+GY    +++ A+ ++ E
Sbjct: 324 TYGVLMHGLCRMGKVDEA-RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE 378

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G  P+  TY +LI G CK G    A +LM+ M  +GC PN+  Y  +ID  CK+G
Sbjct: 379 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R++EA  +L +   + L  + + Y  L+S   K  + + AL +F  M   G  PDI  + 
Sbjct: 439 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 498

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   C+  K +E+   +Q+ +  G+     TY ++I  +LR G +  A+K    M   
Sbjct: 499 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 558

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC  D+ITY  LI  LC+   +++    +E M+ KG++P  ++   L    C+ G+   A
Sbjct: 559 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 618

Query: 597 MIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +  L  +  +     I T N+LI  LC   R   A   F KL
Sbjct: 619 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 660



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 227/446 (50%), Gaps = 7/446 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V Q ++ +  ++GR+ E   ++ EM   G     +T N  +   C++  +  A ++ D M
Sbjct: 254 VYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM 313

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   ++ +Y +++   CRMG+V EA   L+ + +   +L N     LI  +  +G  
Sbjct: 314 LLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT----LINGYVSRGRL 369

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              K      E M+  G  P+++T+  LI GLCKKG+   A R  +  ++    +PNV T
Sbjct: 370 DEAKAVMH--ESMLSVGCGPDIFTYNTLILGLCKKGYLVSA-RELMNEMQIKGCEPNVIT 426

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I  +CKE ++  A  +L+ M  +GL  N   Y  LI   CK    + A ++   M 
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P+I+ +N++I GLCK  + +EA  L +      + A+ ITY  L+   L++   +
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M+  G   D   Y  LI A CR   +++    F++ ++ GL P   +   +I
Sbjct: 547 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R GNI  A+++ + M   G  PD +TY +LI+GLCK  +  EA   ++ +  +GI 
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL 600
           P  +T  TL   +CK+G    A ++L
Sbjct: 667 PDAITYNTLISWHCKEGMFDDAHLLL 692



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 190/426 (44%), Gaps = 15/426 (3%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G C     Y +++      G     D  L  M   G +   +   L++  +   G  G 
Sbjct: 105 KGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG- 163

Query: 277 IKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             QA  LL +M R  +  +P   ++ V++D L      +    +F +++ S    P V+T
Sbjct: 164 --QATRLLLDM-RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML-SKGISPTVYT 219

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++   C   +++ A  LL+ M   G +PN   Y +LI+   KVG       L++ M 
Sbjct: 220 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEML 279

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             GC P++  +N  I GLCK  R+ EA +L+ +   R    +  TY +L+    +  +  
Sbjct: 280 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVD 339

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLFPTKETYTSM 513
           +A  L  ++     NP++  + TLI  +  + ++ E++    E+ ++ G  P   TY ++
Sbjct: 340 EARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTL 395

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  + G + SA +    M   GC P+ ITY  LI   CK+ +L+EA    + M GKG+
Sbjct: 396 ILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGL 455

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAAL 630
           +   V    L    CK      A+ +   +  K     I T N+LI  LC   +   A  
Sbjct: 456 ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALG 515

Query: 631 FFHKLL 636
            +  +L
Sbjct: 516 LYQDML 521



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 33/260 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++S+  +  ++++  +M  +M++ G      T N ++   C++   E A  ++ +M  
Sbjct: 463 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 522

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DK 271
            GV A+  +Y  ++ A+ R G + EA + ++ ML RG  LD+ T   LI A C     +K
Sbjct: 523 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 582

Query: 272 GF---------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           G                             G+I+ A E L +M+ +G  P++ T+  LI+
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK G  ++A  LF KL + +   P+  TY  +IS +CKE   + A +LL R  + G +
Sbjct: 643 GLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 701

Query: 365 PNTNTYTSLIYGHCKVGNFE 384
           PN  T+  L+    K G+ E
Sbjct: 702 PNEVTWYILVSNFIKEGDQE 721


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 267/554 (48%), Gaps = 40/554 (7%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +++ GN      V   +V ++ +  +L+EG      + + GL +  +  N ++G   ++G
Sbjct: 278 VLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG 337

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A E++ E+   GV  +  +  +M+ A C+  ++     +LS M ++G   D  T  
Sbjct: 338 WVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYN 397

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-------KGWTEKA 315
            LI A+C +G    +++AFEL++ M  KG KP V+T+  +I+GLCK       KG  ++ 
Sbjct: 398 TLINAYCRQGL---LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 316 FR------------LFLKLVRSDNYK---------------PNVHTYTAMISGYCKEEKM 348
            +            L ++  R+DN                 P++ +++A+I    K   +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           ++A      MK  GL P+   YT LI G C+ G    A  + D M ++GC  ++  YN I
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           ++GLCK+  + EA EL  +  +R +  D  T+T L++ + K     +A+ LF  M++  L
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD+  Y TLI  FC+  +M++  + + + I+  ++P   +Y  +I GY   G +S A +
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +  M + G     IT   ++ G C+     +A +F  +M+ KGI P  +T  TL   + 
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 589 KQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           K+ +   A  ++  ++    +  V   N ++     + R+  A L   K++ +  N DR 
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 814

Query: 646 SLAALKNACYESNK 659
           +  +L N     N 
Sbjct: 815 TYTSLINGHVTQNN 828



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 256/530 (48%), Gaps = 12/530 (2%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PL 186
            F+H ++ +      L+ +     A  V+  MV   + + R++   S+V+   N G  PL
Sbjct: 231 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK-SGVSRVEIVESLVLTYGNCGSNPL 289

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
           +   L R    A +L       E F  + ++G+C   ++   ++    ++G V  A    
Sbjct: 290 VFDLLVRTYVQARKL---REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             ++  G  ++  TL ++I A C       I+     L +M  KG  P+V T+  LI+  
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQ---KIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C++G  E+AF L +  +     KP V TY A+I+G CK  K  RA+ +L+ M + G+ P+
Sbjct: 404 CRQGLLEEAFEL-MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T TY  L+   C+  N   A  + D M  +G  P++ +++A+I  L K G + +A +  +
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 L  D + YTIL+    +     +AL +   M++ G   D+  Y T++   C++K
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            + E+++ F E    G+FP   T+T++I GY +DGN++ AV  F+ M Q    PD +TY 
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI G CK S++++  + +  MI + I P  ++   L   YC  G  + A  + + + +K
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +   I T NT+++  C       A  F   +L K    D ++   L N 
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 752



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+     + + ++G+  + G ++ A + F +M   G+  D   Y +++  +CR G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            ++EA +    ML++G  LD  T   ++   C +     + +A EL  EM  +G  P+ Y
Sbjct: 548 VMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM---LSEADELFTEMTERGVFPDFY 604

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LI+G  K G   KA  LF  +++  N KP+V TY  +I G+CK  +M +   L   
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + + PN  +Y  LI G+C +G    A+ L D M ++G    I   N I+ G C+ G 
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A E L     + +  D ITY  L++  +K+    +A  L  +M  +GL PD+  Y  
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++  F RQ +M+E+E    + I  G+ P + TYTS+I G++   N+  A +    M Q G
Sbjct: 784 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843

Query: 538 CAPDN 542
             PD+
Sbjct: 844 FVPDD 848



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +   +   F++V +M N+GL     T N ++      G ++ AE +  +M  RG
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           V  D S+Y  ++  +     + EA R    ML RG + D+
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 241/521 (46%), Gaps = 44/521 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S  +  +  E   +   M   GL     T + ++ + C  G ++ A     EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+      Y  ++  +C+ G ++ A+ +++ M+++       T T L+  +C KG  
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG-- 486

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I +A  L  EM  KG  P++YT T L+ GL + G    A +LF ++    N KPN  T
Sbjct: 487 -KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW-NVKPNRVT 544

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  MI GYC+E  M++A   L+ M E+G++P+T +Y  LI+G C  G    A   +D + 
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K  C  N   Y  ++ G C++G+++EA  + ++  QR +  D + Y +L+   LK  + K
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
              GL   M   GL PD   YT++I A  +    KE+   +   I  G  P + TYT++I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA--------------------------- 547
            G  + G ++ A     +M  +   P+ +TYG                            
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784

Query: 548 --------LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
                   LI G C+Q +++EA +    MIG G+SP  +T  T+  E C++ D   A+ +
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844

Query: 600 LESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLL 636
             S+ +K  IR      NTLI   C    +G A    +++L
Sbjct: 845 WNSMTEK-GIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 41/453 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G +      + EM N  L     T   ++G  C  G +  A  ++ EM  +G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     ++  ++    R G + +A +  + M +     +  T  ++I  +C++G    + 
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG---DMS 559

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFE L+EM  KG  P+ Y++  LI GLC  G   +A ++F+  +   N + N   YT +
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGL 618

Query: 339 ISGYCKEEKMNRA-----EM------------------------------LLERMKEQGL 363
           + G+C+E K+  A     EM                              LL+ M ++GL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   YTS+I    K G+F+ A+ + DLM  EGC PN   Y A+I+GLCK G V EA  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 424 LLKKAFQRELQADKITYTILLSEHLK-QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           L  K        +++TY   L    K + + ++A+ L   ++K GL  +   Y  LI  F
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGF 797

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CRQ +++E+ +     I  G+ P   TYT+MI    R  ++  A++ +  M + G  PD 
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + Y  LI G C   ++ +A +    M+ +G+ P
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 8/435 (1%)

Query: 173 FSMVIEMTNN----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           F + +E+ N+    G+         V+   CEL  +  A+E+   M A G   +   Y +
Sbjct: 208 FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNV 267

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C+  +V EA      +  +    D  T   L+   C        +   E+++EM+
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ---EFEIGLEMMDEML 324

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
              + P+    + L++GL K+G  E+A  L +K V      PN+  Y A+I   CK  K 
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNL-VKRVVDFGVSPNLFVYNALIDSLCKGRKF 383

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           + AE+L +RM + GL PN  TY+ LI   C+ G  + A   +  M   G   ++Y YN++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I+G CK G +  A   + +   ++L+   +TYT L+  +  + +  +AL L+  M   G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P I+ +TTL++   R   ++++ K F E     + P + TY  MI GY  +G++S A +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
           + + M + G  PD  +Y  LI GLC   +  EA  F + +        E+    L + +C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 589 KQGDSATAMIILESL 603
           ++G    A+ + + +
Sbjct: 624 REGKLEEALSVCQEM 638



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 225/479 (46%), Gaps = 12/479 (2%)

Query: 202 GLVEY-----AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           GLV++     A E+F++M + G+  D   Y  ++ + C +  ++ A   ++ M   G  +
Sbjct: 201 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +     +LI   C K     + +A  + +++  K  KP+V T+  L+ GLCK    E   
Sbjct: 261 NIVPYNVLIDGLCKKQ---KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +  +++    + P+    ++++ G  K  K+  A  L++R+ + G+ PN   Y +LI  
Sbjct: 318 EMMDEML-CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK   F  A  L D MGK G  PN   Y+ +ID  C++G++  A   L +     L+  
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
              Y  L++ H K  +   A G    M+   L P +  YT+L+  +C + K+ ++ + + 
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    G+ P+  T+T+++ G  R G I  AVK F  M +    P+ +TY  +I G C++ 
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
            + +A +F + M  KGI P   +   L +  C  G ++ A + ++ L K   +L      
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            L+   C E ++  A     +++ +  ++D V    L +   +     LF  L + + +
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 10/354 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + E G + + F  + EMT  G+   T +   ++   C  G    A+ VF +   +G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKG 606

Query: 219 VCA-DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            C  +   Y  ++  +CR G++ EA      M+ RG  LD     +LI        R   
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR--- 663

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K  F LL+EM  +G KP+   +T +ID   K G  ++AF ++  L+ ++   PN  TYTA
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTYTA 722

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL--IYGHCKVGNFERAYDLMDLMGK 395
           +I+G CK   +N AE+L  +M+    +PN  TY     I    +V + ++A +L + + K
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV-DMQKAVELHNAILK 781

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   N   YN +I G C++GR++EA EL+ +     +  D ITYT +++E  ++ + K+
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           A+ L+  M + G+ PD  AY TLI   C   +M ++ +   E +  GL P  +T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 3/312 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P V T +A++ G  K      A  L   M   G+ P+   YT +I   C++ +  RA ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M   GC  NI  YN +IDGLCKK +V EA  + K    ++L+ D +TY  L+    K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E +  L +   M+    +P   A ++L+    ++ K++E+    +  +  G+ P    
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y ++I    +      A   F RM +IG  P+++TY  LI   C++ KLD A  F   M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 570 GKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL--WIRTVNTLIRKLCSEKRVG 626
             G+        +L   +CK GD SA    + E ++KKL   + T  +L+   CS+ ++ 
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 627 MAALFFHKLLGK 638
            A   +H++ GK
Sbjct: 490 KALRLYHEMTGK 501



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 14/301 (4%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +  GN E        ++  F   G+L+E  S+  EM   G+ L         G+  +  L
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY----GVLIDGSL 658

Query: 204 VEYAEEVF----DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                ++F     EM  RG+  D   Y  M+ A  + G   EA      M++ G + +  
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT-EKAFRL 318
           T T +I   C  GF   + +A  L  +M      PN  T+   +D L K     +KA  L
Sbjct: 719 TYTAVINGLCKAGF---VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
              +++      N  TY  +I G+C++ ++  A  L+ RM   G+ P+  TYT++I   C
Sbjct: 776 HNAILKG--LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +  + ++A +L + M ++G  P+  AYN +I G C  G + +A EL  +  ++ L  +  
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893

Query: 439 T 439
           T
Sbjct: 894 T 894


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 271/602 (45%), Gaps = 60/602 (9%)

Query: 115 VALSFFYWAIGFA--KFRHFMRLYIVCATSLISNGNFERAHEVM----QCMVSSFAEIGR 168
           +AL F  W I     + +H   +Y + A  L+    ++ A  ++    Q  + S +  G 
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 151

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD---------------- 212
           L + + +      N +P   S  + ++ +  + G+++YA E F+                
Sbjct: 152 LMDTYPLC-----NSIP---SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNM 203

Query: 213 -------------------EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
                              EM  +G+C +  ++ +++   C  G + +A   L  M + G
Sbjct: 204 ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            +    T   L+  +C KG     K A EL++ M+ KG + +V T+ V ID LC    + 
Sbjct: 264 FVPTIVTYNTLLNWYCKKG---RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSA 320

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA+ L LK +R +   PN  TY  +I+G+ KE K+  A  +   M +  L PN  TY +L
Sbjct: 321 KAY-LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I GHC VG+FE A  L+D M   G   N   Y  +++GLCK  + + A  LL++    ++
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 439

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
               I YT+L+    K     +A+ L   M K G+NPD+  Y++LI  FCR   +K +++
Sbjct: 440 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                  +GL   K  Y+++I  + + GN++ A+K +  MN  G   D+ T   L+S LC
Sbjct: 500 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 559

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIR 610
           +  KL EA +F   M   G+ P  +T   +   Y   GD   A    + + K        
Sbjct: 560 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 619

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACYESNKY---ALFSDL 666
           T  +L++ LC    +  A  F ++L      VD V     L   C   N +   ALF  +
Sbjct: 620 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 679

Query: 667 SQ 668
            Q
Sbjct: 680 VQ 681



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 224/475 (47%), Gaps = 7/475 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G LK+  +++ +M  NG      T N ++   C+ G  + A E+ D M  +G+ AD  +Y
Sbjct: 247 GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 306

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            + +   C   R  +A   L  M       +  T   LI  F  +G  G   Q F    E
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF---NE 363

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +    PN  T+  LI G C  G  E+A RL L  + +   + N  TY  +++G CK E
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRL-LDHMEAAGLRLNEVTYGTLLNGLCKHE 422

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   A+ LLERM+   ++     YT LI G CK G  + A  L+  M K+G  P++  Y+
Sbjct: 423 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 482

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I+G C+ G ++ A E++ + ++  L  +KI Y+ L+    +     +A+ ++  M   
Sbjct: 483 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 542

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G   D      L+++ CR  K+ E+EKF       GL P   TY  +I GY   G+  +A
Sbjct: 543 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 602

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
             +F  M + G  P   TYG+L+ GLCK   L EA +F   +     +   V   TL  E
Sbjct: 603 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 662

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            CK G+   A+ + + + +   +    T ++L+  LC + +   A   F   +G+
Sbjct: 663 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 717



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 199/441 (45%), Gaps = 5/441 (1%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++    + G L E   +V  M  +G+     T + ++   C +G ++ A+E+ 
Sbjct: 442 GHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
             M   G+  +   Y  ++  +C+ G VTEA +  + M   G   D+ T  +L+++ C  
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G  G   +A + L  M R G  PN  T+  +I+G    G    AF  F  +++   + P+
Sbjct: 562 GKLG---EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH-PS 617

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY +++ G CK   +  A+  L R+       ++  Y +L+   CK GN   A  L D
Sbjct: 618 FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD 677

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHLKQ 450
            M +    P+ Y Y++++ GLC+KG+   A  L   A  R  L  + + YT L+    K 
Sbjct: 678 KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKA 737

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              K A   F  M+K G  PD  A+  +I +  R+ +M ++  FF      G+ P   TY
Sbjct: 738 GHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATY 797

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             ++ G+ +   +   +  +  M + G  PD +T+ +LI GL K    D   +    MI 
Sbjct: 798 NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM 857

Query: 571 KGISPCEVTRVTLAYEYCKQG 591
           +G    + T   L  +Y + G
Sbjct: 858 EGTLADQFTFNILINKYSESG 878



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 221/520 (42%), Gaps = 10/520 (1%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             C+++ +  IG     FS   +M   G      T   ++   C+ G +  A++  + +  
Sbjct: 587  DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 646

Query: 217  RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                 D+  Y  ++   C+ G + EA      M+    + D+ T + L+T  C KG   +
Sbjct: 647  IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG--KA 704

Query: 277  IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +         M R    PN   +T L+DGL K G  + AF  F ++++     P+   + 
Sbjct: 705  VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC-PDTVAFN 763

Query: 337  AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            A+I    +  +M +A      M+  G+ PN  TY  L++G  K     R   L   M +E
Sbjct: 764  AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 823

Query: 397  GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            G  P+   ++++I GL K G      +LL K       AD+ T+ IL++++ +  + ++A
Sbjct: 824  GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKA 883

Query: 457  LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
              L   M   G+ PD   Y  +     ++   +ES     E +  G+ P    Y ++I G
Sbjct: 884  FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLING 943

Query: 517  YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
              R G+I  A K    M  +G     +   A++ GL    K ++A    + M+   + P 
Sbjct: 944  MCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPT 1003

Query: 577  EVTRVTLAYEYCKQGDSATAMI---ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
              T  TL + +C+    A A+    ++E    KL +   N LI  +C+      A   + 
Sbjct: 1004 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYE 1063

Query: 634  KLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
            ++  +D   +  + A L +A   +N       L +DL +R
Sbjct: 1064 EMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 230/544 (42%), Gaps = 78/544 (14%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++ F  +G +K    ++  M  +GL L     + ++   C+ G V  A +V+  M   G
Sbjct: 484  LINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNG 543

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              AD  +  ++V + CR G++ EA+++L  M   G + ++ T   +I  +   G  G   
Sbjct: 544  HGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY---GSIGDPL 600

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCK------------------------------ 308
             AF   ++M++ G  P+ +T+  L+ GLCK                              
Sbjct: 601  NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 660

Query: 309  -----KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG- 362
                  G   +A  LF K+V+ +N  P+ +TY+++++G C++ K   A  L      +G 
Sbjct: 661  AETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 719

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            L PN   YT L+ G  K G+ + A+   + M K+G  P+  A+NAIID   ++G++ +A 
Sbjct: 720  LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 779

Query: 423  ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD---IHA----- 474
            +         +  +  TY ILL    K+    + L L+  M++ G+ PD    H+     
Sbjct: 780  DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 839

Query: 475  ---------------------------YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
                                       +  LI  +    KM+++        T G+FP +
Sbjct: 840  SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 899

Query: 508  ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            +TY  +  G  +      +      M + G  P +  Y  LI+G+C+   +  A +  + 
Sbjct: 900  DTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 959

Query: 568  MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKR 624
            M   G    EV    +       G +  AM++L+ + +   + T+    TL+ + C + +
Sbjct: 960  MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1019

Query: 625  VGMA 628
            +  A
Sbjct: 1020 IAEA 1023



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 168/363 (46%), Gaps = 4/363 (1%)

Query: 211  FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            F+EM  +G C D  ++  ++ +  R G++ +A+ + S M   G   + AT  +L+  F  
Sbjct: 747  FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            K    ++ +   L   M+R+G  P+  T   LI GL K G  +   +L  K++       
Sbjct: 807  KQ---ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL-A 862

Query: 331  NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
            +  T+  +I+ Y +  KM +A  L+  M   G+ P+ +TY  +  G  K   F  +  ++
Sbjct: 863  DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922

Query: 391  DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
              M + G  P    Y  +I+G+C+ G +Q A++L  +       + ++  + ++   L  
Sbjct: 923  HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
             +T+ A+ +   M++  L P I  +TTL+  FCR  K+ E+ K        GL      Y
Sbjct: 983  GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1042

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
              +I G   +G+ ++A + ++ M      P+  TY  L+  +   + L +  +    +  
Sbjct: 1043 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102

Query: 571  KGI 573
            +G+
Sbjct: 1103 RGL 1105



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 6/197 (3%)

Query: 169  LKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
             +E   ++ EM  NG +P     +  + G+ C +G ++ A ++ DEM A G  +   +  
Sbjct: 915  FRESTVVLHEMLENGVIPKHAQYITLINGM-CRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 228  LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             MV      G+  +A   L  ML    +   AT T L+  FC       I +A +L   M
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA---KIAEALKLKGVM 1030

Query: 288  VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
               G K +V  + VLI G+C  G +  AF L+ ++ R  +  PN+ TY  ++        
Sbjct: 1031 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM-RHRDLCPNITTYAVLVDAISAANN 1089

Query: 348  MNRAEMLLERMKEQGLL 364
            + + E LL  ++E+GL+
Sbjct: 1090 LIQGEKLLTDLQERGLI 1106


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 229/474 (48%), Gaps = 26/474 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC---EL---GLVEYAEEVFD 212
           +V S+         + ++  M + G P      N  +G  C   EL    L+  AE+V++
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C MG+   A + +  M+ +G + D +T + +IT  C+  
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++AF L +EM   G  P+VYT+T+LID  CK G  E+A R +   +RS     NV
Sbjct: 303 ---KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA-RSWFDEMRSIGCSANV 358

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MD 391
            TYTA++  Y K +++ +A  +  RM + G  PNT TY++L+ G CK G  ++A ++   
Sbjct: 359 VTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTK 418

Query: 392 LMGK---------------EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           L+G                +   PN+  Y A+IDGLCK  +V +A ELL        + +
Sbjct: 419 LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPN 478

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            I Y  L+    K  +   A  +F RM K G  P +H YT+LI A  + +++  + K   
Sbjct: 479 HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLS 538

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + + +   P   TYT+MI G  R G    A+K    M + GC+P+ +TY ALI GL K  
Sbjct: 539 QMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           K+D + Q +  M  KG +P  VT   L    C  G    A  +L  + +  W +
Sbjct: 599 KVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK 652



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 225/503 (44%), Gaps = 71/503 (14%)

Query: 140 ATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGL 184
           A  L   G F+ A ++++ M               ++   E  ++++ F +  EM + G+
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++   C+ GL+E A   FDEM + G  A+  +Y  ++ AY +  ++ +A  
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASD 379

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKG------------------------FRGS---- 276
             + M+D G   +  T + L+   C  G                        F G     
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS 439

Query: 277 --------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                               +  A ELL+ M+  G +PN   +  LIDG CK G  + A 
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +FL++ +   Y P VHTYT++I    K+ +++ A  +L +M E    PN  TYT++I G
Sbjct: 500 EVFLRMSKC-GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDG 558

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C++G  ++A  L+ +M ++GC+PN+  Y A+IDGL K G+V  + +L  +   +    +
Sbjct: 559 LCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPN 618

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY +L++         +A  L   M +      +  Y +++  F   KK   S    +
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLE 676

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT----YGALISGL 552
           E  + G  P    Y  +I  + + G +  A++  + M ++  +  NIT    Y +LI  L
Sbjct: 677 ELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS-SSLNITSKDMYTSLIQAL 735

Query: 553 CKQSKLDEACQFYESMIGKGISP 575
           C  S+L++A + Y  +  KG+ P
Sbjct: 736 CLASQLEKAFELYSEITRKGVVP 758



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 180/389 (46%), Gaps = 48/389 (12%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
            ++Y  +V      G++    R    M + G  +D  T+     A C +G R S   A  
Sbjct: 40  GATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG-RWS--DALV 96

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           ++E   R+ +K +    T +I GL +    ++A   FL  +R ++  PNV TY  +++G+
Sbjct: 97  MIE---REDFKLDTVLCTQMISGLMEASLFDEAIS-FLHRMRCNSCIPNVVTYRTLLTGF 152

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            K++++   + ++  M ++G  PN + + SL++ +C   ++  AY L+  M   GC P  
Sbjct: 153 LKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGY 212

Query: 403 YAYNAIIDG-----------------------------------------LCKKGRVQEA 421
            AYN  I                                           LC  G+   A
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMA 272

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           ++++K    +    D  TY+ +++   +  + ++A  LF  M   G+NPD++ YT LI +
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDS 332

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC+   ++++  +F E  + G      TYT+++  YL+   +  A   F RM   GC P+
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIG 570
            ITY AL+ GLCK  ++ +AC+ Y  +IG
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLIG 421



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 12/332 (3%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           +++SNG  E  H +   ++  F ++G++     + + M+  G      T   ++    + 
Sbjct: 469 AMLSNG-CEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKD 527

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
             ++ A +V  +M       +  +Y  M+   CR+G   +A + LS M ++G   +  T 
Sbjct: 528 RRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTY 587

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T LI      G  G +  + +L  +M  KG  PN  T+ VLI+  C  G  ++A  L  +
Sbjct: 588 TALIDGL---GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644

Query: 322 LVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           + ++  Y P  +  Y +++ G+ K  K   +  LLE ++  G +P    Y  LI    K 
Sbjct: 645 MKQT--YWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKA 700

Query: 381 GNFERAYDLMDLMGKEGCTPNIYA---YNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           G  E A +L   M +   + NI +   Y ++I  LC   ++++A+EL  +  ++ +  + 
Sbjct: 701 GRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPEL 760

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             +  L+   +K  +  +AL L   +   G+N
Sbjct: 761 SVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 121/296 (40%), Gaps = 12/296 (4%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            +K+ G  P+  TY +L+      G  +  + +   M + G   + +        LCK+G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R  +A  ++++    + + D +  T ++S  ++ +   +A+    RM      P++  Y 
Sbjct: 90  RWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           TL+  F ++K++   ++     +  G  P    + S++  Y    +   A K  +RM   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 537 GCAPDNITYGALISGLCKQSKLDE------ACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           GC P  + Y   I  +C   +L        A + YE M+       +V     A   C  
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 591 GDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           G    A  I++ +  K ++   +T   +I  LC   +V  A L F ++     N D
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 228/448 (50%), Gaps = 10/448 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +  +L+E   ++ EM   G    T + N VV   CE G  E A ++ ++M  + 
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +C++ ++ EA+R L  M+ R       T T LI  F        + 
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF---SRADRLA 319

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ ++E+M + G  P++ T+  L+DGLCK G  E+A  L   +V  D   P+V TY+ +
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD-CAPDVVTYSIL 378

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK  K++ A +LLE M E+G  PN  T+ ++I G CK G  +  + +++LM +  C
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP++  Y+ +IDG CK  R+Q+A+ +L       +  DK +Y+ +L       + ++A  
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQE 492

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M K G  P    Y  +I   C  ++  E+ K  Q     G  P   TY+ +I G  
Sbjct: 493 VMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+     M + GC PD  TY +LI G CK +K+D A Q +++M   G  P ++
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
               L   +C+ G+   A+ +++ + +K
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLMLEK 640



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 242/520 (46%), Gaps = 36/520 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  R+ E + ++ EM         +  N ++   C++G ++ A  V   M  R 
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++V  C+   + EA + +  M + G   D      L+   C +     ++
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQN---QLE 214

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +LLEEMV  G +P+ +++  ++  LC+ G  E+A ++  K++      P+V TY ++
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK-KCGPDVVTYNSL 273

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CK  KM+ AE LLE M  +   P   TYT+LI G  +      AY +M+ M K G 
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  YN ++DGLCK G+++EA+ELL+   +++   D +TY+IL++   K  +   A  
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ---------EAIT--------- 500
           L   M++ G  P++  + T+I  FC+  K+ E  K  +         + +T         
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453

Query: 501 -----------AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
                       G+ P K +Y+SM+ G    G +  A +    M + GC P +  Y  +I
Sbjct: 454 KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALII 513

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
            GLC   + DEA +  + M  +G  P   T   L    CK      A+ +L+ + +K  +
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV 573

Query: 610 RTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
             V T   LI   C   ++  A   F  +       D+++
Sbjct: 574 PDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLA 613



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 222/423 (52%), Gaps = 15/423 (3%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT---LTLLI 265
           E+ +EM AR    D  ++  ++ AYC++G   + DR LS    RG +  + T     +LI
Sbjct: 45  EIANEMLARRFSPDVITHNTILKAYCQIG---DLDRALSHF--RGKMWCSPTAFTYCILI 99

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C       I +A++LL+EM++K   P+   +  LI GLCK G  + A R  LK++  
Sbjct: 100 HGLCQCQ---RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAA-RNVLKMMLE 155

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            +  P+V TYT++I G C+   ++ A  L+E+MKE GL P+T  Y +L+ G CK    E 
Sbjct: 156 RSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEE 215

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
              L++ M + G  P+ ++YN ++  LC+ G+ +EA ++L+K  +++   D +TY  L+ 
Sbjct: 216 VSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMD 275

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K ++  +A  L   MV     P +  YTTLI  F R  ++ ++ +  ++   AG+ P
Sbjct: 276 GFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY  ++ G  + G +  A +  + M +  CAPD +TY  L++GLCK  K+D+A    
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
           E M+ +G  P  VT  T+   +CK G       +LE + +      + T +TLI   C  
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKA 455

Query: 623 KRV 625
            R+
Sbjct: 456 NRM 458



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 213/432 (49%), Gaps = 25/432 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFSMVIEMT 180
           Y      L  +G +E A ++++ M+                 F ++ ++ E   ++ +M 
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
                    T   ++G       +  A  V ++M   G+  D  +Y  ++   C+ G++ 
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLE 354

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA   L  M+++    D  T ++L+   C     G +  A  LLE M+ +G +PN+ T  
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCK---LGKVDDARLLLEMMLERGCQPNLVTFN 411

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            +IDG CK G  ++  ++ L+L++  +  P+V TY+ +I GYCK  +M  A  +L     
Sbjct: 412 TMIDGFCKAGKVDEGHKV-LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL----- 465

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+  +Y+S++ G C  G  E A ++MDLM K+GC P    Y  II GLC   R  E
Sbjct: 466 -GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A ++L+   +R  + +  TY+IL++   K    + A+ +   M++ G  PD+  YT+LI 
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+  KM  + + F+    +G  P K  Y  +I G+ + GN+  A++  Q M + GC P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 541 DNITYGALISGL 552
           D  TY +L+  L
Sbjct: 645 DAATYFSLMRSL 656



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 219/417 (52%), Gaps = 15/417 (3%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           S+Y  ++  + R G         + ML R    D  T   ++ A+C  G    + +A   
Sbjct: 25  STYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIG---DLDRA--- 78

Query: 284 LEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L     K W  P  +T+ +LI GLC+    ++A++L  ++++ D + P+   Y  +I+G 
Sbjct: 79  LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH-PDAAVYNCLIAGL 137

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK  K++ A  +L+ M E+  +P+  TYTSLI G C+    + A  LM+ M + G TP+ 
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
            AYNA+++GLCK+ +++E  +LL++  +   + D  +Y  +++   +  + ++A  +  +
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++    PD+  Y +L+  FC+  KM E+E+  ++ +     PT  TYT++I G+ R   
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ A +  + M + G +PD +TY  L+ GLCK  KL+EA +  E M+ K  +P  VT   
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           L    CK G    A ++LE + ++     + T NT+I   C   +V       HK+L
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEG----HKVL 430



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 226/473 (47%), Gaps = 27/473 (5%)

Query: 167 GRLKEGFS------MVIEMTNNGLPLITS----TLNRVVGIACELGLVEYAEEVFDEMCA 216
           G L  GFS      MV+E+ N  L    S    T N ++   C++G ++ A   F     
Sbjct: 28  GALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF----- 82

Query: 217 RG---VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           RG       A +Y +++   C+  R+ EA + L  M+ +    D A    LI   C    
Sbjct: 83  RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK--- 139

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G I  A  +L+ M+ +   P+V T+T LI G C+    ++A +L  K+  S    P+  
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES-GLTPDTV 198

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y A+++G CK+ ++     LLE M E G  P+T +Y +++   C+ G +E A  +++ M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++ C P++  YN+++DG CK  ++ EA  LL+    R      ITYT L+    +    
Sbjct: 259 IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRL 318

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A  +   M KAG++PD+  Y  L+   C+  K++E+ +  +  +     P   TY+ +
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSIL 378

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G  + G +  A    + M + GC P+ +T+  +I G CK  K+DE  +  E M     
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILE-SLDKKLWIRTVNTLIRKLCSEKRV 625
           +P  VT  TL   YCK      A  IL  S DK  +    ++++  LCS  +V
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASY----SSMLEGLCSTGKV 487



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 36/275 (13%)

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           K R  E Y   ++ F    +    TY  L++   +   +K  L +   M+    +PD+  
Sbjct: 2   KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61

Query: 475 YTTLIAAFCRQ---------------------------------KKMKESEKFFQEAITA 501
           + T++ A+C+                                  +++ E+ +   E I  
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
              P    Y  +I G  + G I +A    + M +  C PD ITY +LI G C+ + LDEA
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRK 618
            +  E M   G++P  V    L    CKQ        +LE +    ++    + NT++  
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           LC   +   A     K++ K    D V+  +L + 
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDG 276


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 232/462 (50%), Gaps = 12/462 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+     T   V+   C +  V+ A  +  +M   G   +A  Y+ ++ A  ++G
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV E  + L  ML  G I D  T    I   C K  R  I +A +L++ M+ +G+ PN +
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC-KMLR--IHEAAKLVDRMLLRGFTPNSF 341

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL-E 356
           T+ VL+ GLC+ G  ++A R+ L  V +    PNV  +  +I+GY    +++ A+ ++ E
Sbjct: 342 TYGVLMHGLCRMGKVDEA-RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE 396

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G  P+  TY +LI G CK G    A +LM+ M  +GC PN+  Y  +ID  CK+G
Sbjct: 397 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 456

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R++EA  +L +   + L  + + Y  L+S   K  + + AL +F  M   G  PDI  + 
Sbjct: 457 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 516

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   C+  K +E+   +Q+ +  G+     TY ++I  +LR G +  A+K    M   
Sbjct: 517 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 576

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC  D+ITY  LI  LC+   +++    +E M+ KG++P  ++   L    C+ G+   A
Sbjct: 577 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 636

Query: 597 MIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +  L  +  +     I T N+LI  LC   R   A   F KL
Sbjct: 637 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 678



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 228/446 (51%), Gaps = 7/446 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V Q ++ + +++GR+ E   ++ EM   G     +T N  +   C++  +  A ++ D M
Sbjct: 272 VYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM 331

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   ++ +Y +++   CRMG+V EA   L+ + +   +L N     LI  +  +G  
Sbjct: 332 LLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT----LINGYVSRGRL 387

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              K      E M+  G  P+++T+  LI GLCKKG+   A R  +  ++    +PNV T
Sbjct: 388 DEAKAVMH--ESMLSVGCGPDIFTYNTLILGLCKKGYLVSA-RELMNEMQIKGCEPNVIT 444

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I  +CKE ++  A  +L+ M  +GL  N   Y  LI   CK    + A ++   M 
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P+I+ +N++I GLCK  + +EA  L +      + A+ ITY  L+   L++   +
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M+  G   D   Y  LI A CR   +++    F++ ++ GL P   +   +I
Sbjct: 565 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R GNI  A+++ + M   G  PD +TY +LI+GLCK  +  EA   ++ +  +GI 
Sbjct: 625 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 684

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL 600
           P  +T  TL   +CK+G    A ++L
Sbjct: 685 PDAITYNTLISWHCKEGMFDDAHLLL 710



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 17/427 (3%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G C     Y +++      G     D  L  M   G +   +   L++  +   G  G 
Sbjct: 123 KGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG- 181

Query: 277 IKQAFELLEEMVRKG---WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             QA  LL +M  +G    +P   ++ V++D L      +    +F +++ S    P V+
Sbjct: 182 --QATRLLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML-SKGISPTVY 236

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+  ++   C   +++ A  LL+ M   G +PN   Y +LI+   KVG       L++ M
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              GC P++  +N  I GLCK  R+ EA +L+ +   R    +  TY +L+    +  + 
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 356

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLFPTKETYTS 512
            +A  L  ++     NP++  + TLI  +  + ++ E++    E+ ++ G  P   TY +
Sbjct: 357 DEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G + SA +    M   GC P+ ITY  LI   CK+ +L+EA    + M GKG
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAA 629
           ++   V    L    CK      A+ +   +  K     I T N+LI  LC   +   A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 630 LFFHKLL 636
             +  +L
Sbjct: 533 GLYQDML 539



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 33/260 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++S+  +  ++++  +M  +M++ G      T N ++   C++   E A  ++ +M  
Sbjct: 481 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 540

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DK 271
            GV A+  +Y  ++ A+ R G + EA + ++ ML RG  LD+ T   LI A C     +K
Sbjct: 541 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 600

Query: 272 GF---------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           G                             G+I+ A E L +M+ +G  P++ T+  LI+
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK G  ++A  LF KL + +   P+  TY  +IS +CKE   + A +LL R  + G +
Sbjct: 661 GLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 719

Query: 365 PNTNTYTSLIYGHCKVGNFE 384
           PN  T+  L+    K G+ E
Sbjct: 720 PNEVTWYILVSNFIKEGDQE 739


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 240/495 (48%), Gaps = 12/495 (2%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLI---SNGNFER-AHEVMQCMVSSFAEIGRLKE 171
           AL+FF W      FRH    +      L    +   +ER    ++ C  S  AE  R+  
Sbjct: 73  ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNC--SDTAEDMRVSA 130

Query: 172 GFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
                I  T +  L L     N  +       + EY   V+ ++   G+  D  +Y  M+
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            +YC+ G +T A R+   +L+ G   +  T   L+  +C     G +++A  L   M   
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRT---GELRKACWLFLMMPLM 247

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G + N Y++T+LI GLC      KA  LFL +++ D   PNV  +T +ISG CK  ++  
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFL-MMKRDGCSPNVRAFTFLISGLCKSGRVGD 306

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A +L + M + G++P+  TY ++I G+ K+G    A  + +LM K GC P+ + YN +I 
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC + + +EA ELL  A +       +T+T L++ +    +   AL +  +M+ +    
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  +  LI +  ++ ++KE+++   E    GL P   TYTS+I GY + G +  A++  
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M + GC P+  TY +L+ GL K  KL +A      M   GI P  +T  TL    C +
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 591 GDSATAMIILESLDK 605
            D   A  + E +++
Sbjct: 546 HDFDNAFRLFEMMEQ 560



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 239/567 (42%), Gaps = 94/567 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  ++++GR+ +   +   M  NG      T N ++   C+    E AEE+ +     G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC   +  +A R  + M+     LD      LI +   K     +K
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD---RLK 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A ELL E+   G  PNV T+T +IDG CK G                     WT     
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 504

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   PNV TYT ++ G C E   + A  L E M++ GL
Sbjct: 505 YGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 364 LPNTNTY--------------------------------TSLIYGHCKVGNFERAYDLMD 391
            P+ + Y                                T+LI G  K GN + A  L++
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGCTP+ Y Y+ ++  LCK+ R+ EA  +L +   R ++     YTIL+ E L++ 
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  ++  M  +G  P    YT  I ++C++ +++++E    +    G+ P   TY 
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 512 SMI--CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----------------SGLC 553
            +I  CG++  G I  A    +RM    C P+  TY  L+                SG+ 
Sbjct: 744 ILIDGCGHM--GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI--RT 611
              +LD   Q  E M+  G++P   T  +L   +CK G    A ++L+ +  K       
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGK 638
           + TL+ K C + +    AL F  ++ +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSE 888



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 230/519 (44%), Gaps = 26/519 (5%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   +++S  +  RLKE   ++ E++ NGL     T   ++   C+ G V+ A EV   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   +A +Y  ++    +  ++ +A   L+ M   G I +  T T L+   CD+  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE-- 545

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                 AF L E M + G KP+ + + VL D LCK G  E+A+     +VR       V+
Sbjct: 546 -HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            YT +I G+ K    + A  L+ERM ++G  P++ TY+ L++  CK      A  ++D M
Sbjct: 602 -YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G    I+AY  +ID + ++G+   A  +  +      +    TYT+ ++ + K+   
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  L  +M + G+ PD+  Y  LI        +  +    +  + A   P   TY  +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 514 I-------CGYLRDGNISS---------AVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           +         Y+R  + S            +  +RM + G  P   TY +LI+G CK  +
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMI-ILESLDKKLWIRTVNT 614
           L+EAC   + M GKG+SP E     L    C  K  + A + + I+     +  + +   
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           L+  LC+E         F  LL    N D V+   L + 
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 29/428 (6%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           QC    F    RL   F M   M  NGL         +    C+ G    AEE +  +  
Sbjct: 542 QCDEHDFDNAFRL---FEM---MEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVR 592

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV      Y  ++  + + G    A   +  M+D G   D+ T ++L+ A C +     
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK---R 649

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  +L++M  +G K  ++ +T+LID + ++G  + A R++ ++  S  +KP+  TYT
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYT 708

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+ YCKE ++  AE L+ +M+ +G+ P+  TY  LI G   +G  +RA+  +  M   
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 397 GCTPNIYAYNAIIDGLCKKG----------------RVQEAYELLKKAFQRELQADKITY 440
            C PN + Y  ++  L K                   +   ++LL++  +  L     TY
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + L++   K    ++A  L   M   GL+P+   YT LI   C  K  +++  F      
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G  P  E+Y  ++ G   +G+       F  + ++G   D + +  L  GL K   +D 
Sbjct: 889 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDI 948

Query: 561 ACQFYESM 568
             Q    M
Sbjct: 949 CFQMLSIM 956



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 146/269 (54%), Gaps = 8/269 (2%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           ++ + GLLP+T TY ++I  +CK G+   A+    L+ + G  P  +  NA++ G C+ G
Sbjct: 173 QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTG 232

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            +++A  L         Q ++ +YTIL+         ++AL LF  M + G +P++ A+T
Sbjct: 233 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFT 292

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI+  C+  ++ ++   F      G+ P+  TY +MI GY + G ++ A+K  + M + 
Sbjct: 293 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN 352

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSA 594
           GC PD+ TY  LI GLC Q K +EA +   + + +G +P  VT   L   YC  ++ D A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411

Query: 595 TAM--IILES---LDKKLWIRTVNTLIRK 618
             M   ++ S   LD +++ + +N+LI+K
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKK 440



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 55/327 (16%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E   ++ +M+  G+         ++      G  ++A+ +++EM + G    A++Y 
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC+ GR+ +A+  +  M   G   D  T  +LI      G  G I +AF  L+ M
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRM 765

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG------------WT----EKAFRLFLKLVRSDNYKPN 331
           V    +PN +T+ +L+  L K              W     +  ++L  ++V+     P 
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH-GLNPT 824

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI----------------- 374
           V TY+++I+G+CK  ++  A +LL+ M  +GL PN + YT LI                 
Sbjct: 825 VTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVS 884

Query: 375 ------------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
                              G C  G+FE+   L   + + G   +  A+  + DGL K G
Sbjct: 885 IMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944

Query: 417 RVQEAYELLKKAFQRELQADKITYTIL 443
            V   +++L    +R       TY ++
Sbjct: 945 YVDICFQMLSIMEKRYCCISSQTYALV 971



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 7/224 (3%)

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN  +  L +    +    +  +  Q  L  D +TY  ++  + K+ +   A   F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + GL P+      L+  +CR  +++++   F      G    + +YT +I G      + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+  F  M + GC+P+   +  LISGLCK  ++ +A   +++M   G+ P  +T   + 
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 585 YEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEK 623
             Y K G    A+ I E ++K       W  T NTLI  LC +K
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDW--TYNTLIYGLCDQK 372



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 32/177 (18%)

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ ++V+ GL PD   Y T+I ++C++  +  + ++F+  +  GL P   T  +++ GY 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F  M  +GC  +  +Y  LI GLC    + +A   +  M   G SP   
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPN-- 287

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                                         +R    LI  LC   RVG A L F  +
Sbjct: 288 ------------------------------VRAFTFLISGLCKSGRVGDARLLFDAM 314


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 217/446 (48%), Gaps = 7/446 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D  +  +++  +C MG++T     L+ +L RG      T T LI   C    +G 
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLC---LKGQ 144

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A    ++++ +G K +  ++  LI+G+CK G T  A +L  K +     KPNV  Y 
Sbjct: 145 VNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRK-IDGRLTKPNVEMYN 203

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  +  TYT+LIYG C     + A  L++ M  +
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+Y YN ++D LCK+G+V+EA  +L    +  ++ D ITY+ L+  +    E K+A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M   G+ PD+H+YT LI  FC+ K + E+   F+E     + P   TY+S+I G
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G IS        M   G   + ITY +LI GLCK   LD A   +  M  +GI PC
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 577 EVTRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
             T   L    CK G   D+  A   L +    L +   N +I   C +  +  A     
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 634 KLLGKDQNVDRVSLAALKNACYESNK 659
           K+       + V+   + NA ++ ++
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDE 529



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 222/453 (49%), Gaps = 39/453 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G    T T   ++   C  G V  A    D++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 216 ARGVCADASSYKLMVVAYCRMGR-----------------------------------VT 240
           A+G+  D  SY  ++   C++G                                    V+
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA    S M  +G   D  T T LI  FC       +K+A  LL EMV K   PNVYT+ 
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFC---IASKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+D LCK+G  ++A  +   ++++   KP+V TY+ ++ GY    ++ +A+ +   M  
Sbjct: 274 ILVDALCKEGKVKEAKNVLAVMLKA-CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P+ ++YT LI G CK    + A +L   M ++   P I  Y+++IDGLCK GR+  
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            ++L+ +   R + A+ ITY  L+    K     +A+ LF +M   G+ P    +T L+ 
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++K++++ FQ+ +T G       Y  MI G+ + G +  A+    +M + GC P
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + +T+  +I+ L K+ + D+A +    MI +G+
Sbjct: 513 NAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 158/388 (40%), Gaps = 75/388 (19%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +  + A  L  R++ +G+ P+  T   LI   C +G     +
Sbjct: 55  HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  + K G  P+   +  +I GLC KG+V +A     K   + ++ D+++Y  L++  
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174

Query: 448 LKQAETK-----------------------------------QALGLFCRMVKAGLNPDI 472
            K  +T+                                   +A GLF  M   G++ D+
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP-----------------TKE------- 508
             YTTLI  FC   K+KE+     E +   + P                  KE       
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294

Query: 509 -----------TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
                      TY++++ GY     +  A   F  M+ +G  PD  +Y  LI+G CK   
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNT 614
           +DEA   ++ M  K + P  VT  +L    CK G  S    +I E  D+ +   + T N+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNV 642
           LI  LC    +  A   F+K+  KDQ +
Sbjct: 415 LIDGLCKNGHLDRAIALFNKM--KDQGI 440



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++ F +   + E  ++  EM   N +P I +  + + G+ C+ G + Y  ++ DEM  R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL-CKSGRISYVWDLIDEMRDR 403

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+ A+  +Y  ++   C+ G +  A    + M D+G    + T T+L+   C KG  G +
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC-KG--GRL 460

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A E  ++++ KG+  +VY + V+I+G CK+G  E+A  +  K+   +   PN  T+  
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM-EENGCVPNAVTFDI 519

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I+   K+++ ++AE LL +M  +GLL
Sbjct: 520 IINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 3/199 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F RM+     P I  +  ++ +F + K    +          G+ P   T   +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G I+       ++ + G  P  IT+  LI GLC + ++++A  F++ ++ +GI 
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK GD+  A+ ++  +D +L    +   NT+I  LC  + V  A   
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F ++  K  + D V+   L
Sbjct: 222 FSEMTAKGISADVVTYTTL 240



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  AV  F RM  +   P  I +  ++    K      A      +  KGI P  +T  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   +C  G       +L  + K+ +     T  TLI+ LC + +V  A  F  KLL +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 639 DQNVDRVSLAALKNA 653
               D+VS   L N 
Sbjct: 159 GIKFDQVSYGTLING 173


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 239/486 (49%), Gaps = 13/486 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-----TSTLNRVVGIACELGLVE 205
            H+V   +V SF +    ++ F   +++  N L PL      T   N ++ +  E   ++
Sbjct: 12  GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 71

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
             E V+ EM ARG+  D  ++  ++ A CR  +V  A   L  M  RG   D  T T L+
Sbjct: 72  LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 131

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             F ++G   SI+ A  +   M+  G      T  VLI+G CK G  E A   +++   +
Sbjct: 132 QGFVEEG---SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG-YIQQEIA 187

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D ++P+  TY   ++G C+ + +  A  +++ M ++G  P+  TY  ++   CK G  E 
Sbjct: 188 DGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 247

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +++ M   GC P+I  +N +I  LC   R++EA +L ++   + +  D  T+ IL++
Sbjct: 248 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +   AL LF  M  +G  PD   Y TLI   C   K+ ++    ++  + G   
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY ++I G  +   I  A + F +M+  G + + IT+  LI GLCK  K+D+A +  
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
             MI +G+ P  +T  ++   YCKQGD   A  ILE++     ++ + T  TLI  LC  
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 487

Query: 623 KRVGMA 628
            R  +A
Sbjct: 488 GRTQVA 493



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 214/421 (50%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+   V +A +V D M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y ++V   C+ G++ EA   L+ M+DRG + D  T   LI A C  G R 
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC-TGNR- 279

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  ++  KG  P+VYT  +LI+ LCK G    A RLF ++ ++    P+  TY
Sbjct: 280 -LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTY 337

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 397

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + N   +N +IDGLCK  ++ +A+EL+ +     LQ + ITY  +L+ + KQ + K+
Sbjct: 398 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  ++ 
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  NI  A+  F+ M ++G  PD +TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577

Query: 575 P 575
           P
Sbjct: 578 P 578



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           M+ EM++ G+    +T   ++    E G +E A  V   M   G  A   +  +++  YC
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           ++GRV +A  ++   +  G   D  T    +   C     G    A ++++ MV++G  P
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG---HALKVMDVMVQEGHDP 227

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+ ++++ LCK G  E+A  +  ++V      P++ T+  +I+  C   ++  A  L
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             ++  +G+ P+  T+  LI   CKVG+   A  L + M   GCTP+   YN +ID LC 
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G++ +A +LLK           ITY  ++    K+   ++A  +F +M   G++ +   
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           + TLI   C+ KK+ ++ +   + I+ GL P   TY S++  Y + G+I  A    + M 
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             G   D +TYG LI+GLCK  +   A +    M  KG+ P
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G KP+V T   L+  LC+      A  L L+ + S    P+  T+T ++ G+ +E
Sbjct: 79  EMGARGIKPDVVTFNTLMKALCRAHQVRTAV-LMLEEMSSRGVAPDETTFTTLMQGFVEE 137

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +  RM E G      T   LI G+CK+G  E A   +     +G  P+   Y
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  ++GLC+   V  A +++    Q     D  TY I+++   K  + ++A G+  +MV 
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 257

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PDI  + TLIAA C   +++E+    ++    G+ P   T+  +I    + G+   
Sbjct: 258 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 317

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     +T  T+  
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK+     A  + + +D +   R   T NTLI  LC +K++  A    ++++ +
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G+L +   ++ +M + G P  T T N ++   C+   +E AEEVFD+M  +G
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A ++  ++   C+  ++ +A   ++ M+  G   +N T   ++T +C +G    IK
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG---DIK 456

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A ++ L+ +R    +P    Y  +
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV-LRGMRIKGMRPTPKAYNPV 515

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           +    +   +  A  L   M E G  P+  TY  +  G C+ G   + A+D M  M  +G
Sbjct: 516 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 575

Query: 398 CTPNIYAYNAIIDGLCKKG 416
             P   ++  + +GL   G
Sbjct: 576 FIPEFSSFRMLAEGLLNLG 594



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 32/261 (12%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           MG  G  P++  +N ++  LC+  +V+ A  +L++   R +  D+ T+T L+   +++  
Sbjct: 80  MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + AL +  RM++ G +        LI  +C+  +++++  + Q+ I  G  P + TY +
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G  ++ ++  A+K    M Q G  PD  TY  +++ LCK  +L+EA      M+ +G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             P                                 I T NTLI  LC+  R+  A    
Sbjct: 260 CLP--------------------------------DITTFNTLIAALCTGNRLEEALDLA 287

Query: 633 HKLLGKDQNVDRVSLAALKNA 653
            ++  K  + D  +   L NA
Sbjct: 288 RQVTVKGVSPDVYTFNILINA 308



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G +K+   ++  MT NG  +   T   ++   C+ G  + A +V   M  +G
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ +  R   + +A      M + G   D  T  ++    C  G  G IK
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG--GPIK 562

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+ + EMV KG+ P   +  +L +GL   G  +   R    ++   + +    +  + 
Sbjct: 563 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR---ESDVSA 619

Query: 339 ISGYCKEEK 347
           I GY K  K
Sbjct: 620 IRGYLKIRK 628


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 254/515 (49%), Gaps = 9/515 (1%)

Query: 78  HLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYI 137
           ++ + P  ++L+  + S      I++V            LSFF +   +  F H ++ Y 
Sbjct: 55  NIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYC 114

Query: 138 VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
                LI++   ++A  ++  +VS   + G     F+ ++E    G    +   + ++ +
Sbjct: 115 SMVHFLIAHRMNQQAESLLHFVVSRKGK-GSASSVFASILE--TKGTLSSSFVFDALMSV 171

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             E G V  A + F       +    +  K ++    +M     A  +   +LD G   +
Sbjct: 172 YTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPN 231

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  +L+   C +G    +K A  + +E+ + G +P   +   LI+G CK G  E+ FR
Sbjct: 232 VYTFNVLMNRLCKEG---KVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFR 288

Query: 318 LFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           L  K+V  +    P+V TY+A+I G CKE ++  A  L + M ++GL+PN  T+T+LI G
Sbjct: 289 L--KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK G  + A ++   M  +G   ++  YN +IDGLCK G  +EA + + +  +R L  D
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           K TYT LL    K+ + + AL +   MVK G+  D  A+T +I+  CR  K+ ++E+  +
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E + AGL P   TYT ++ G+ + G++    K  + M   G  P  ITY  L++GLCKQ 
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           ++  A     +M+  G+ P ++T   L   +CK G
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG 561



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 211/412 (51%), Gaps = 7/412 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           L+     R G+ + +  + S +  +G +  +     L++ + + G+     Q F L +  
Sbjct: 132 LLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTK-- 189

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            +   K        L++ + K      A   +L+++ S  Y PNV+T+  +++  CKE K
Sbjct: 190 -KHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDS-GYPPNVYTFNVLMNRLCKEGK 247

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A+++ + +++ GL P   ++ +LI G+CK GN E  + L  +M +    P+++ Y+A
Sbjct: 248 VKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSA 307

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDGLCK+ ++++A  L K+   R L  + +T+T L++   K      AL ++ +M   G
Sbjct: 308 LIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKG 367

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           L  D+  Y TLI   C+    +E+ KF  E    GL P K TYT+++ G  ++G++  A+
Sbjct: 368 LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELAL 427

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  + M + G   DN+ + A+ISGLC+  K+ +A +    M+  G+ P + T   +   +
Sbjct: 428 EMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGF 487

Query: 588 CKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           CK+GD      +L+ +     I    T N L+  LC + +V  A +  + +L
Sbjct: 488 CKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAML 539



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 244/547 (44%), Gaps = 71/547 (12%)

Query: 32  YQTHHHNFLANSKQPAFSSTSSSPSPPQSLVK--------TVCSMVLESYYQQFHLRSSP 83
           ++ HH   L N + P F        PP+SL+            S  ++SY    H   + 
Sbjct: 72  FKAHHFISLVN-QNPYFL-------PPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAH 123

Query: 84  PRLNLQIDIDSLTH--------EQAITVVASLANEAGSMVALSFFYWAIG--FAKFRHFM 133
            R+N Q +  SL H          A +V AS+    G++ + SF + A+   + +F  ++
Sbjct: 124 -RMNQQAE--SLLHFVVSRKGKGSASSVFASILETKGTLSS-SFVFDALMSVYTEF-GYV 178

Query: 134 RLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
              I C   L    N +      +C++    ++          +E+ ++G P    T N 
Sbjct: 179 SDAIQCF-RLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNV 237

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G V+ A+ +FDE+   G+   A S+  ++  YC+ G + E            
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEE------------ 285

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                             GFR  +K   E           P+V+T++ LIDGLCK+   E
Sbjct: 286 ------------------GFR--LKMVMEEFRVF------PDVFTYSALIDGLCKECQLE 319

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  LF ++       PN  T+T +I+G CK  +++ A  + ++M  +GL  +   Y +L
Sbjct: 320 DANHLFKEMC-DRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G CK G F  A   +  M K G  P+ + Y  ++DG CK+G ++ A E+ K+  +  +
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGI 438

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           Q D + +T ++S   +  +   A      M++AGL PD   YT ++  FC++  +K   K
Sbjct: 439 QLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFK 498

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E  + G  P   TY  ++ G  + G + +A      M  +G  PD+ITY  L+ G C
Sbjct: 499 LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC 558

Query: 554 KQSKLDE 560
           K  KL +
Sbjct: 559 KHGKLGD 565



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 7/254 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+     +  +M   GL       N ++   C+ G    A +   EM  RG+  D  +Y
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G +  A      M+  G  LDN   T +I+  C  G    I  A   L E
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDG---KIVDAERTLRE 467

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+R G KP+  T+T+++DG CKKG  +  F+L LK ++SD + P V TY  +++G CK+ 
Sbjct: 468 MLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKL-LKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  A+MLL  M   G++P+  TY  L+ GHCK G   +  D  ++  + G   +  +Y 
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG---KLGDFQNVKTEMGLVSDYASYR 583

Query: 407 AIIDGLCKKGRVQE 420
           +++  L K  + ++
Sbjct: 584 SLLHELSKASKDRQ 597


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 250/514 (48%), Gaps = 13/514 (2%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL F YW      F+H +  Y    T +  +       +++  M+              +
Sbjct: 84  ALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDI 143

Query: 176 VIEMTNNGLPLIT-STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
             +M+ + +  ++    N ++ +    GLV+   +++ EM    V  D  ++ LM+  YC
Sbjct: 144 CRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYC 203

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           +MG V EA +++  M+  G   D  T T  I  +C       +  AF + EEM  +    
Sbjct: 204 KMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSK---DVDSAFRVFEEMPNR---- 256

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N  ++  LI GLC+ G  ++A  LF+++ + D   PNV+TYTA+I G C++  +++A  L
Sbjct: 257 NEVSYNQLIHGLCEAGRIDEAVSLFVRM-KDDCCYPNVYTYTALIKGLCRK-NVHKAMGL 314

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ M E+ L+P+  TY SLI G C+ G+ + AY L+ LM + G  P+   Y   ID LCK
Sbjct: 315 LDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCK 374

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
             RV+EA  L     +  + A+ I Y++L+  + K  +  +A  LF +M+    +P+ + 
Sbjct: 375 SNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYT 434

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   C    +KE+   F + +  GL PT  T+  +I   L+ G+   A K  Q+M 
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P   TY A I   C   K+ EA      M  +G+ P + T  +L   Y K G + 
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554

Query: 595 TAMIILESL---DKKLWIRTVNTLIRKLCSEKRV 625
           +A  +L+S+   D +    T  +LI++L  ++ V
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYV 588



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 221/517 (42%), Gaps = 18/517 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E GR+ E  S+ + M ++       T   ++   C    V  A  + DEM  R 
Sbjct: 264 LIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERN 322

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   CR G +  A R LS M +RG + D  T    I   C       ++
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN---RVE 379

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L + +  +G   NV  ++VLIDG CK G  ++A  LF K++ S N  PN +T+ A+
Sbjct: 380 EARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML-SKNCSPNAYTFNAL 438

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C    +  A  L ++M + GL P   T+  LI    K G+F+ A+  +  M   G 
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    YNA I+  C  G+VQEA +++ +  +  +  D  TYT L+  + K   T  A  
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFD 558

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKM--KESEKFFQEAITAGLFPTKETYTSMICG 516
           +   M  A   P  H + +LI     ++ +  K  E   +     G  P    +  M   
Sbjct: 559 VLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMM--- 615

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
                     ++ F+ M + GC PD+  Y  LISG+CK   L  A +  + M  +GISP 
Sbjct: 616 -----EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           E+    +    CK      A  I+E +        +    TLI  L  E         F 
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           KL G   N D ++   L +   +      FS L + +
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM 767



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 192/441 (43%), Gaps = 45/441 (10%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L   + ++  M   GL     T    +   C+   VE A  +FD +   GV A+   Y
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  YC++G+V EA      ML +    +  T   LI   C  G   ++K+A  L ++
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAG---NLKEALSLFDQ 457

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+ G KP VYT  +LI  + K+G  + A +   K++ S   KP   TY A I  YC   
Sbjct: 458 MVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE-KPVARTYNAFIEVYCSAG 516

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  AE ++ +MKE+G+ P+  TYTSLI  + K+G    A+D++  M    C P+ + + 
Sbjct: 517 KVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFL 576

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  L  K  V E      K+ +  +++      +  S   K  E    + LF  M K 
Sbjct: 577 SLIKQLFDKRYVVE------KSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKH 630

Query: 467 GLNPDIHAYTTLIAAFCR--------------QK---------------------KMKES 491
           G  PD   Y  LI+  C+              QK                     K  E+
Sbjct: 631 GCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEA 690

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               ++ I +G  P  E   ++ICG   +G        F+++   G   D I +  LI G
Sbjct: 691 ANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDG 750

Query: 552 LCKQSKLDEACQFYESMIGKG 572
           + KQ  ++E  Q +E M   G
Sbjct: 751 MLKQGLVEEFSQLFEEMEKNG 771



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 31/348 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++      G LKE  S+  +M   GL     T N ++G   + G  + A +   +M + G
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A +Y   +  YC  G+V EA+  +  M + G   D+ T T LI A+   G  G   
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY---GKLGLTY 554

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-------------------------WTE 313
            AF++L+ M     +P+ +T   LI  L  K                          W  
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKM 614

Query: 314 KAFRLFLKL---VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             F + ++L   +      P+   Y  +ISG CK E +  A  LL++M+++G+ P+   +
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVF 674

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            ++I   CK+  +  A ++++ M   G +P +     +I GL ++G  +    + KK   
Sbjct: 675 NAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRG 734

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
                D+I + IL+   LKQ   ++   LF  M K G N     Y+ L
Sbjct: 735 CGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 239/486 (49%), Gaps = 13/486 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-----TSTLNRVVGIACELGLVE 205
            H+V   +V SF +    ++ F   +++  N L PL      T   N ++ +  E   ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
             E V+ EM ARG+  D  ++  ++ A CR  +V  A   L  M  RG   D  T T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             F ++G   SI+ A  +   M+  G      T  VLI+G CK G  E A   +++   +
Sbjct: 224 QGFVEEG---SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG-YIQQEIA 279

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D ++P+  TY   ++G C+ + +  A  +++ M ++G  P+  TY  ++   CK G  E 
Sbjct: 280 DGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +++ M   GC P+I  +N +I  LC   R++EA +L ++   + +  D  T+ IL++
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +   AL LF  M  +G  PD   Y TLI   C   K+ ++    ++  + G   
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY ++I G  +   I  A + F +M+  G + + IT+  LI GLCK  K+D+A +  
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
             MI +G+ P  +T  ++   YCKQGD   A  ILE++     ++ + T  TLI  LC  
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 623 KRVGMA 628
            R  +A
Sbjct: 580 GRTQVA 585



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 214/421 (50%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+   V +A +V D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y ++V   C+ G++ EA   L+ M+DRG + D  T   LI A C  G R 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC-TGNR- 371

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  ++  KG  P+VYT  +LI+ LCK G    A RLF ++ ++    P+  TY
Sbjct: 372 -LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTY 429

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + N   +N +IDGLCK  ++ +A+EL+ +     LQ + ITY  +L+ + KQ + K+
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  NI  A+  F+ M ++G  PD +TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 575 P 575
           P
Sbjct: 670 P 670



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           M+ EM++ G+    +T   ++    E G +E A  V   M   G  A   +  +++  YC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           ++GRV +A  ++   +  G   D  T    +   C     G    A ++++ MV++G  P
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG---HALKVMDVMVQEGHDP 319

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+ ++++ LCK G  E+A  +  ++V      P++ T+  +I+  C   ++  A  L
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             ++  +G+ P+  T+  LI   CKVG+   A  L + M   GCTP+   YN +ID LC 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G++ +A +LLK           ITY  ++    K+   ++A  +F +M   G++ +   
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           + TLI   C+ KK+ ++ +   + I+ GL P   TY S++  Y + G+I  A    + M 
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             G   D +TYG LI+GLCK  +   A +    M  KG+ P
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G KP+V T   L+  LC+      A  L L+ + S    P+  T+T ++ G+ +E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAV-LMLEEMSSRGVAPDETTFTTLMQGFVEE 229

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +  RM E G      T   LI G+CK+G  E A   +     +G  P+   Y
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  ++GLC+   V  A +++    Q     D  TY I+++   K  + ++A G+  +MV 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 349

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PDI  + TLIAA C   +++E+    ++    G+ P   T+  +I    + G+   
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 409

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     +T  T+  
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK+     A  + + +D +   R   T NTLI  LC +K++  A    ++++ +
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G+L +   ++ +M + G P  T T N ++   C+   +E AEEVFD+M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A ++  ++   C+  ++ +A   ++ M+  G   +N T   ++T +C +G    IK
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG---DIK 548

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A ++ L+ +R    +P    Y  +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV-LRGMRIKGMRPTPKAYNPV 607

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           +    +   +  A  L   M E G  P+  TY  +  G C+ G   + A+D M  M  +G
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 398 CTPNIYAYNAIIDGLCKKG 416
             P   ++  + +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 40/341 (11%)

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           ML   +      P    Y  +I     VG  +    L+  M +EG    +   ++ +D  
Sbjct: 60  MLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY 119

Query: 413 CKKGRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +    +A +L+    Q    +QAD + Y  LL+  ++ ++ K    ++  M   G+ P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  + TL+ A CR  +++ +    +E  + G+ P + T+T+++ G++ +G+I +A++  
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            RM ++GC+   +T   LI+G CK  ++++A  + +  I  G  P ++T  T     C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 591 GDSATAMIILESL-----DKKLW---------------------------------IRTV 612
                A+ +++ +     D  ++                                 I T 
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           NTLI  LC+  R+  A     ++  K  + D  +   L NA
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G +K+   ++  MT NG  +   T   ++   C+ G  + A +V   M  +G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ +  R   + +A      M + G   D  T  ++    C  G  G IK
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG--GPIK 654

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+ + EMV KG+ P   +  +L +GL   G  +   R    ++   + +    +  + 
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR---ESDVSA 711

Query: 339 ISGYCKEEK 347
           I GY K  K
Sbjct: 712 IRGYLKIRK 720


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 230/448 (51%), Gaps = 1/448 (0%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S  +F     ++  +V ++A+  R + GF      ++ GL L  ++ N ++    ++G 
Sbjct: 84  VSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGE 143

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +   E V+ EM  R +     S+ +++   C++G++ +A   +  M  RG   +  T   
Sbjct: 144 IGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNT 203

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +C  G  G + +A  +L+EM   G  PN  T  +LIDG CK      A ++F ++ 
Sbjct: 204 LIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R    KPNV TY ++I+G C   K+N A  L ++M    L PN  T+ +L+ G CK    
Sbjct: 264 RQ-GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMV 322

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ++A +L D M K+G TPN+  YN +ID  CK   +++A+ L +    + +  D  TY  L
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++   ++ + + A  L   M    L  D+  Y  LI + C + +MK++ +   E    GL
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P++ TY +MI GY ++GN+ +A+    +M ++G   +  TY  LI G CK+ KL++A  
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQG 591
               M+ KG+ P  +T   +  E  ++G
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 214/433 (49%), Gaps = 15/433 (3%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D  CA  +  D     ++V AY +  R            D G  L   +   L++     
Sbjct: 87  DSFCANSIIVD-----ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKV 141

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G  G ++  ++   EM+R+  +P + +  ++I+GLCK G   KA  + ++ ++      N
Sbjct: 142 GEIGDMEFVYK---EMIRRRIEPTLISFNIVINGLCKVGKLNKAGDI-IEDMKVRGVSAN 197

Query: 332 VHTYTAMISGYCKEEK---MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           V TY  +I GYCK  K   M +A+ +L+ M+  G+ PN  T+  LI G CK  N   A  
Sbjct: 198 VITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMK 257

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   M ++G  PN+  YN++I+GLC  G+V EA  L  +     L+ + IT+  LL+   
Sbjct: 258 VFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFC 317

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K    KQA  LF  M K G+ P++  Y  LI A+C+ + M+++   ++  +  G+ P   
Sbjct: 318 KNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVS 377

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY  +I G  R G++ +A      M+      D ITY  LI  LC + ++ +A +  + M
Sbjct: 378 TYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEM 437

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRV 625
             KG+ P ++T  T+   YCK+G+   A+ +   +E + +   + T N LI+  C + ++
Sbjct: 438 CRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKL 497

Query: 626 GMAALFFHKLLGK 638
             A    +++L K
Sbjct: 498 EDANGLLNEMLEK 510



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 4/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G++ E  ++  +M N+ L     T N ++   C+  +V+ A E+FD+M  +G
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  + ++Y +++ AYC+   + +A      ML +G   D +T   LI   C KG    ++
Sbjct: 337 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG---DLE 393

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+ EM  K  K ++ T+ +LID LC KG  +KA RL  ++ R    KP+  TY  M
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK-GLKPSQLTYNTM 452

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCKE  +  A  L  +M++ G L N  TY  LI G CK    E A  L++ M ++G 
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 399 TPNIYAYNAIIDGLCKKGRVQE 420
            PN   Y  + + + +KG V +
Sbjct: 513 IPNRMTYEIVTEEMMEKGFVPD 534



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%)

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           QE  ++L         A+ I   IL+  + K   T+     F R    GL   + +   L
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           ++   +  ++ + E  ++E I   + PT  ++  +I G  + G ++ A    + M   G 
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 539 APDNITYGALISGLCKQSKLD---EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
           + + ITY  LI G CK  K+    +A    + M   GI P EVT   L   +CK  + + 
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 596 AMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           AM +   +++   K  + T N+LI  LC+  +V  A     +++
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 16/159 (10%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++     G L+   ++V EM    L     T N ++   C  G ++ A  + DEMC 
Sbjct: 380 NCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCR 439

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG---- 272
           +G+     +Y  M+  YC+ G +  A    S M   G + + AT  +LI  FC K     
Sbjct: 440 KGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLED 499

Query: 273 FRGSIKQAFE------------LLEEMVRKGWKPNVYTH 299
             G + +  E            + EEM+ KG+ P++  H
Sbjct: 500 ANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGH 538


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 223/457 (48%), Gaps = 10/457 (2%)

Query: 205 EYAEEVF--DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           +Y+  V+  ++M   GV     S  +++   CR+  V  A      M   G   D  T T
Sbjct: 108 QYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFT 167

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C++G    IK A EL  EMVR G +P+V ++  LI+GLC  G T  A  +F K+
Sbjct: 168 TLINGVCNEG---KIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
              +  KPNV TY  +I   CK+  +N A   L  M  +G+ P+  TY S+++G C +G 
Sbjct: 225 -EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A  L   M + GC P++  YN IID L K   V +A + L +   + +  D +TYT 
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +L       +  +A+ LF +M + G  PD+ AY T+I + C+ + + ++ +F  E +  G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY++++ G+   G +  A + F+ M      P+ +T+  L+ GLC++  + EA 
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKL 619
             +E+M  KG+ P   T   L   YC +     A  + E +  K     + + N LI   
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACY 655
           C+ +R+  A     ++  K    + V+    +K  CY
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCY 560



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 252/575 (43%), Gaps = 22/575 (3%)

Query: 109 NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEI 166
           N   S+V    F  +I  AK + +  +  +C    +    F   H V  +  +++    +
Sbjct: 88  NPRPSIVEFGKFLGSI--AKMKQYSTVVYLCNQMDL----FGVTHTVYSLNILINCLCRL 141

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
             +    S+  +M   G+     T   ++   C  G ++ A E+++EM   G   D  SY
Sbjct: 142 NHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISY 201

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C  G    A      M   G   +  T   +I + C       +  A + L E
Sbjct: 202 NTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL---VNDAMDFLSE 258

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +G  P+  T+  ++ GLC  G   +A RLF K +  +  KP+V TY  +I    K+ 
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLF-KRMEQNGCKPDVVTYNIIIDSLYKDR 317

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +N A   L  M +QG+ P+  TYT++++G C +G    A  L   M ++GC P++ AYN
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            IID LCK   V +A E L +   R +  + +TY+ +L       +  +A  LF  MV  
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P+   ++ L+   C++  + E+   F+     G+ P   TY +++ GY     ++ A
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            K F+ M   GCAPD  +Y  LI+G C   ++D+A      M  K ++P  VT  T+   
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G    A  + + +     + T+ T   L+  LC    +  A   F  +  K    D
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617

Query: 644 RVSLAALKNACYESNKY----ALFSDLSQRIAEGI 674
            +    L    +   K      LFS LS   A+GI
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLS---ADGI 649



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 243/527 (46%), Gaps = 25/527 (4%)

Query: 85  RLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLI 144
           +L +Q D+ + T     T++  + NE    VA+  +   +        +  Y      L 
Sbjct: 156 KLGIQPDVITFT-----TLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS-YNTLINGLC 209

Query: 145 SNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           ++GN   A  V + M               + S  +   + +    + EM   G+P    
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAI 269

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C LG +  A  +F  M   G   D  +Y +++ +  +   V +A  +LS M
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +D+G   D  T T ++   C   + G + +A  L ++M +KG KP+V  +  +ID LCK 
Sbjct: 330 VDQGIPPDVVTYTTILHGLC---YLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A   FL  +      PN  TY+ ++ G+C   +++ A  L + M  + ++PNT T
Sbjct: 387 RLVNDAME-FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLT 445

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           ++ L+ G C+ G    A  + + M ++G  PNIY YNA+++G C + ++ EA ++ +   
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    D  +Y IL++ +       +A  L  +M    L P+   Y T++   C   ++ 
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLL 565

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++++ F++  ++G+ PT  TY+ ++ G  + G++  A+K F+ M +    PD I Y  LI
Sbjct: 566 DAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            G+    KL+ A   +  +   GI P   T   +     K+G S  A
Sbjct: 626 EGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 185/355 (52%), Gaps = 4/355 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+P    T   ++   C LG +  A  +F +M  +G   D  +Y  ++ + C+  
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            V +A  +LS M+DRG   +  T + ++  FC+    G + +A +L +EMV +   PN  
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN---LGQLDEATQLFKEMVGRNVMPNTL 444

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T ++L+DGLC++G   +A R   + +     +PN++TY A+++GYC   KMN A  + E 
Sbjct: 445 TFSILVDGLCQEGMVSEA-RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G  P+ ++Y  LI G+C     ++A  L+  M  +  TPN   YN I+ GLC  GR
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A EL KK     +    +TY+ILL+   K     +AL LF  M +  L PDI  YT 
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           LI       K++ ++  F +    G+ P   TY  MI G L++G    A + F++
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 191/400 (47%), Gaps = 4/400 (1%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +G+L E   +   M  NG      T N ++    +  LV  A +   EM  +G+  D  +
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++   C +G++ EA R    M  +G   D      +I + C       +  A E L 
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL---VNDAMEFLS 397

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EMV +G  PN  T++ ++ G C  G  ++A +LF ++V   N  PN  T++ ++ G C+E
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV-GRNVMPNTLTFSILVDGLCQE 456

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             ++ A  + E M E+G+ PN  TY +L+ G+C       A  + ++M  +GC P++++Y
Sbjct: 457 GMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSY 516

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I+G C   R+ +A  LL +   ++L  + +TY  ++           A  LF +M  
Sbjct: 517 NILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCS 576

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           +G+ P +  Y+ L+   C+   + E+ K F+      L P    YT +I G    G +  
Sbjct: 577 SGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEV 636

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           A   F +++  G  P   TY  +I GL K+   DEA + +
Sbjct: 637 AKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 147/338 (43%), Gaps = 51/338 (15%)

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++ + +  +MN    ++E  K  G +     Y++++Y            + MDL G    
Sbjct: 78  LASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVY----------LCNQMDLFG---V 124

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           T  +Y+ N +I+ LC+   V  A  +  K F+  +Q D IT+T L++    + + K A+ 
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVE 184

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  MV++G  PD+ +Y TLI   C       +   F++    G  P   TY ++I    
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ--------------- 563
           +D  ++ A+ +   M   G  PD ITY +++ GLC   +L+EA +               
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304

Query: 564 --------------------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
                               F   M+ +GI P  VT  T+ +  C  G    A+ + + +
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 604 DK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           ++   K  +   NT+I  LC ++ V  A  F  +++ +
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 3/199 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL  F RM +    P I  +   + +  + K+         +    G+  T  +   +I
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R  ++  AV  + +M ++G  PD IT+  LI+G+C + K+  A + Y  M+  G  
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  ++  TL    C  G++  A+ + + +++   K  + T NT+I  LC ++ V  A  F
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 632 FHKLLGKDQNVDRVSLAAL 650
             +++G+    D ++  ++
Sbjct: 256 LSEMVGRGIPPDAITYNSI 274


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 239/486 (49%), Gaps = 13/486 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-----TSTLNRVVGIACELGLVE 205
            H+V   +V SF +    ++ F   +++  N L PL      T   N ++ +  E   ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
             E V+ EM ARG+  D  ++  ++ A CR  +V  A   L  M  RG   D  T T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             F ++G   SI+ A  +   M+  G      T  VLI+G CK G  E A   +++   +
Sbjct: 224 QGFVEEG---SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG-YIQQEIA 279

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D ++P+  TY   ++G C+ + +  A  +++ M ++G  P+  TY  ++   CK G  E 
Sbjct: 280 DGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +++ M   GC P+I  +N +I  LC   R++EA +L ++   + +  D  T+ IL++
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +   AL LF  M  +G  PD   Y TLI   C   K+ ++    ++  + G   
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY ++I G  +   I  A + F +M+  G + + IT+  LI GLCK  K+D+A +  
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
             MI +G+ P  +T  ++   YCKQGD   A  ILE++     ++ + T  TLI  LC  
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 623 KRVGMA 628
            R  +A
Sbjct: 580 GRTQVA 585



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 214/421 (50%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+   V +A +V D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y ++V   C+ G++ EA   L+ M+DRG + D  T   LI A C  G R 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC-TGNR- 371

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  ++  KG  P+VYT  +LI+ LCK G    A RLF ++ ++    P+  TY
Sbjct: 372 -LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTY 429

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + N   +N +IDGLCK  ++ +A+EL+ +     LQ + ITY  +L+ + KQ + K+
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  NI  A+  F+ M ++G  PD +TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 575 P 575
           P
Sbjct: 670 P 670



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 205/425 (48%), Gaps = 18/425 (4%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           RAH+V   ++              M+ EM++ G+    +T   ++    E G +E A  V
Sbjct: 193 RAHQVRTAVI--------------MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
              M   G  A   +  +++  YC++GRV +A  ++   +  G   D  T    +   C 
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
               G    A ++++ MV++G  P+V+T+ ++++ LCK G  E+A  +  ++V      P
Sbjct: 299 NDHVG---HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLP 354

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           ++ T+  +I+  C   ++  A  L  ++  +G+ P+  T+  LI   CKVG+   A  L 
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M   GCTP+   YN +ID LC  G++ +A +LLK           ITY  ++    K+
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              ++A  +F +M   G++ +   + TLI   C+ KK+ ++ +   + I+ GL P   TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S++  Y + G+I  A    + M   G   D +TYG LI+GLCK  +   A +    M  
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594

Query: 571 KGISP 575
           KG+ P
Sbjct: 595 KGMRP 599



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G KP+V T   L+  LC+      A  + L+ + S    P+  T+T ++ G+ +E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAV-IMLEEMSSRGVAPDETTFTTLMQGFVEE 229

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +  RM E G      T   LI G+CK+G  E A   +     +G  P+   Y
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  ++GLC+   V  A +++    Q     D  TY I+++   K  + ++A G+  +MV 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 349

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PDI  + TLIAA C   +++E+    ++    G+ P   T+  +I    + G+   
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 409

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     +T  T+  
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK+     A  + + +D +   R   T NTLI  LC +K++  A    ++++ +
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G+L +   ++ +M + G P  T T N ++   C+   +E AEEVFD+M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A ++  ++   C+  ++ +A   ++ M+  G   +N T   ++T +C +G    IK
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG---DIK 548

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A ++ L+ +R    +P    Y  +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV-LRGMRIKGMRPTPKAYNPV 607

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           +    +   +  A  L   M E G  P+  TY  +  G C+ G   + A+D M  M  +G
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 398 CTPNIYAYNAIIDGLCKKG 416
             P   ++  + +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 40/341 (11%)

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           ML   +      P    Y  +I     VG  +    L+  M +EG    +   ++ +D  
Sbjct: 60  MLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY 119

Query: 413 CKKGRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +    +A +L+    Q    +QAD + Y  LL+  ++ ++ K    ++  M   G+ P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  + TL+ A CR  +++ +    +E  + G+ P + T+T+++ G++ +G+I +A++  
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            RM ++GC+   +T   LI+G CK  ++++A  + +  I  G  P ++T  T     C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 591 GDSATAMIILESL-----DKKLW---------------------------------IRTV 612
                A+ +++ +     D  ++                                 I T 
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           NTLI  LC+  R+  A     ++  K  + D  +   L NA
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G +K+   ++  MT NG  +   T   ++   C+ G  + A +V   M  +G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ +  R   + +A      M + G   D  T  ++    C  G  G IK
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG--GPIK 654

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+ + EMV KG+ P   +  +L +GL   G  +   R    ++   + +    +  + 
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR---ESDVSA 711

Query: 339 ISGYCKEEK 347
           I GY K  K
Sbjct: 712 IRGYLKIRK 720


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 230/460 (50%), Gaps = 6/460 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F ++ R+  GFS++ ++   GL L   T N ++   C++G    A E+FD+M 
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ARG   D  +Y  ++   C++G    A      M + G   D  T + +I + C      
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR--- 276

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + +A ++   M  KG  PN++T+  LI GLC    W E +    L  + S N  PN+ T
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS--AMLNEMMSLNIMPNIVT 334

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++ +I+ +CKE  +  A  +L+ M E G+ PN  TY+SL+ G+        A  L D+M 
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P++++YN +I+G CK  R+ EA +L  +   + L  D ++Y  L+    +    +
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M+  G  PD+  Y+ L+  FC+Q  + ++ + F+   +  L P    Y  +I
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               +  N+  A K F  +   G  P+   Y  +I+GLCK+  LDEA + + +M   G  
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 574

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           P E +   +   + +  D + A+ ++  + +K ++  V T
Sbjct: 575 PNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 212/437 (48%), Gaps = 8/437 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD-RGAILDNATLT 262
           ++ A   F+ M  R        +  ++ A  +M    +A   LS  ++  G   D  TL 
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +LI  F        +   F +L ++++ G +  + T   LI+GLCK G   +A  LF  +
Sbjct: 162 MLINCFFQ---LQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V +  Y+P+VHTYT +I+G CK  +   A  L  +M E G  P+  TY+++I   CK   
Sbjct: 219 V-ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A D+   M  +G +PNI+ YN++I GLC   R +EA  +L +     +  + +T+++
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L++   K+    +A G+   M + G+ P++  Y++L+  +  Q ++ E+ K F   IT G
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   +Y  +I GY +   I  A + F  M   G  PD ++Y  LI GLC+  +L EA 
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
             +++M+  G  P   T   L   +CKQG  A A  +  ++     K  +   N LI  +
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517

Query: 620 CSEKRVGMAALFFHKLL 636
           C  + +  A   F +L 
Sbjct: 518 CKSRNLKEARKLFSELF 534



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 202/414 (48%), Gaps = 39/414 (9%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+  D  +  +++  + ++ RV      L+ ++  G  L   T   LI   C  G
Sbjct: 147 QMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVG 206

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G   QA EL ++MV +G++P+V+T+T +I+GLCK G T  A  LF K+  +   +P+V
Sbjct: 207 KFG---QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA-GCQPDV 262

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY+ +I   CK+ ++N A  +   MK +G+ PN  TY SLI G C    +  A  +++ 
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      PNI  ++ +I+  CK+G V EA  +LK   +  ++ + +TY+ L++ +  QAE
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382

Query: 453 TKQALGLF----------------------CR-------------MVKAGLNPDIHAYTT 477
             +A  LF                      C+             M+  GL PDI +Y T
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+  +++E+   F+  +T G  P   TY+ ++ G+ + G ++ A + F+ M    
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             P+ + Y  LI  +CK   L EA + +  +  +G+ P      T+    CK+G
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG 556



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 175/367 (47%), Gaps = 4/367 (1%)

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           FR +I  A      M+ +  +P +     L+  + K      A     K +      P+ 
Sbjct: 99  FR-NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDT 157

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +T   +I+ + + ++++    +L ++ + GL     T+ +LI G CKVG F +A +L D 
Sbjct: 158 YTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDD 217

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P+++ Y  II+GLCK G    A  L +K  +   Q D +TY+ ++    K   
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +AL +F  M   G++P+I  Y +LI   C   + +E+     E ++  + P   T++ 
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I  + ++GN+  A    + M ++G  P+ +TY +L++G   Q+++ EA + ++ MI KG
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 573 ISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAA 629
             P   +   L   YCK      A  +  E + + L   I + NTLI  LC   R+  A 
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457

Query: 630 LFFHKLL 636
             F  +L
Sbjct: 458 DLFKNML 464


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 247/519 (47%), Gaps = 16/519 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  ++ G++K    ++ EM  + +       + ++   C+ G V  A  +  ++  RG
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y  ++   C +GR  E  + L+ M+      D+ T  +LI A C +   G I 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE---GRIL 282

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L  M ++G KP++ T+  L++G C +    +A  LF ++V+    +P+V  Y  +
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR-GLEPDVLNYNVL 341

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK + ++ A +L + +  + L+P   +Y SLI G C  G       L+D M     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN +ID LCK+GR+ EA  +L    ++ ++ + +TY  ++  +  +     A  
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F RMVK+GL PDI  Y  LI  +C+ + + E+   F+E     L P   +Y S+I G  
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G I    +    M   G +PD ITY  L+   CK    D+A   +  ++ +GI P   
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFY 580

Query: 579 TRVTLAYEYC-----KQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           T   +    C     K  + A   +++        ++T   LI  LC +   G A L   
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN--VQTYTILINALCKDGSFGEAMLLLS 638

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           K+   D+  D ++   +     + N+    +D ++++ E
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNE----TDKAEKLRE 673



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 7/469 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P  TS  ++++G    +G    A  +F ++ ++G+    +++ +++  Y        A  
Sbjct: 52  PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L+ +L  G   +  T   +I  FC     G I +A +  + ++ +G+  + +T+  LI+
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFC---INGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GL K G  + A  L  ++ +S + +PN+  Y+A+I G CK+  ++ A  L  ++ E+G+L
Sbjct: 169 GLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            +  TY SLI G C VG ++    L+  M +E   P+ Y +N +ID LCK+GR+ EA  +
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGV 287

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    +R  + D +TY  L+  +  +    +A  LF RMVK GL PD+  Y  LI  +C+
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K + E+   F+E     L PT  +Y S+I G    G IS   K    M+     PD +T
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  LI  LCK+ ++ EA      M+ KG+ P  VT   +   YC + +   A  I   + 
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 605 K---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K   +  I   N LI   C  + V  A + F ++  K+   D  S  +L
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 209/430 (48%), Gaps = 5/430 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N +        ++ +  + GR+ E   ++  M+  G      T N ++   C    V  A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            E+F+ M  RG+  D  +Y +++  YC+   V EA      + ++  +   A+   LI  
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C+ G    +K+   LL+EM      P+V T+ +LID LCK+G   +A  + + +++   
Sbjct: 380 LCNSGRISHVKK---LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKK-G 435

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            KPN+ TY AM+ GYC    +N A+ +  RM + GL P+   Y  LI G+CK    + A 
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L   M  +   P+I +YN++IDGLC  GR+    ELL +        D ITY ILL   
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K     +A+ LF R +  G+ PD +    ++   C+ +K+K +E   +  +  G  P  
Sbjct: 556 CKTQPFDKAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           +TYT +I    +DG+   A+    +M      PD IT+  +I  L ++++ D+A +  E 
Sbjct: 615 QTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREE 674

Query: 568 MIGKGISPCE 577
           MI +G+   E
Sbjct: 675 MIARGLVNIE 684



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 225/500 (45%), Gaps = 37/500 (7%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            FS++  +  +G      T N ++   C  G++  A +    + A+G   D  +Y  ++ 
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGF-------------RGSI 277
              + G++  A   L  M ++ ++  N  + + LI   C  GF             RG +
Sbjct: 169 GLSKNGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL 227

Query: 278 KQAF-------------------ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             A                    +LL +MVR+   P+ YT  +LID LCK+G   +A + 
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA-QG 286

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++     KP++ TY A++ GYC  E ++ A  L  RM ++GL P+   Y  LI G+C
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K    + A  L   +  +   P I +YN++IDGLC  GR+    +LL +        D +
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL+    K+    +ALG+   M+K G+ P+I  Y  ++  +C +  +  ++  F   
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + +GL P    Y  +I GY +   +  A+  F+ M      PD  +Y +LI GLC   ++
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLI 616
               +  + M   G SP  +T   L   +CK      A+ +   + + +W    T + ++
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586

Query: 617 RKLCSEKRVGMAALFFHKLL 636
             LC  +++ MA      LL
Sbjct: 587 DNLCKGEKLKMAEDALKHLL 606



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 3/311 (0%)

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+   ++ A     RM      P T+ +  L+    ++G++  A  L   +  +G +P+I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             +  +I+    +     A+ LL    +   Q + +T+  +++         +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           ++  G   D   Y TLI    +  ++K +    QE   + + P    Y+++I G  +DG 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +S A+    ++ + G   D +TY +LI G C   +  E  Q    M+ + + P + T   
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 583 LAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L    CK+G    A  +L  + K   K  I T N L+   CS + V  A   F++++ + 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 640 QNVDRVSLAAL 650
              D ++   L
Sbjct: 331 LEPDVLNYNVL 341



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 11/304 (3%)

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           + +C+  N + A    + M +    P    ++ ++  + + G    A  L  +   + + 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
               T+TIL++ +  Q+ T  A  L   ++K+G  P++  + T+I  FC    + ++  F
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            Q  +  G    + TY ++I G  ++G I +A+   Q M +    P+ + Y ALI GLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMI---ILESLDKKLWI 609
              + +A      +  +GI    VT  +L    C  G     T ++   + E++D   + 
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY- 266

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKY---ALFSD 665
            T N LI  LC E R+  A      +  + +  D V+  AL    C   N +    LF+ 
Sbjct: 267 -TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 666 LSQR 669
           + +R
Sbjct: 326 MVKR 329


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 253/557 (45%), Gaps = 43/557 (7%)

Query: 155  VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDE 213
            V         E G L E   +  +M N GL L   + N  +  ++ +      A  VF E
Sbjct: 600  VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659

Query: 214  MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
                GVC + +SY +++   C++GR+ EA   L  M  +G   D  + + +I  +C    
Sbjct: 660  FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR--- 716

Query: 274  RGSIKQAFELLEEMVRKGWKPNVYTH---------------------------------- 299
             G + + ++L+E+M +KG KPN YT+                                  
Sbjct: 717  FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 300  -TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
             T L+DG CK+G    A + F ++  S +  P+V TYTA+ISG+C+   M  A  L   M
Sbjct: 777  YTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 359  KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              +GL P+  T+T L+ G+CK G+ + A+ + + M + GC+PN+  Y  +IDGLCK+G +
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 419  QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
              A ELL + ++  LQ +  TY  +++   K    ++A+ L      AGLN D   YTTL
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 479  IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
            + A+C+  +M ++++   E +  GL PT  T+  ++ G+   G +    K    M   G 
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 539  APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            AP+  T+  L+   C ++ L  A   Y+ M  +G+ P   T   L   +C   +   A  
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 599  ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
            + + +  K   + + T + LI+     K+   A   F ++       D+       +  Y
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKY 1135

Query: 656  ESNKYALFSDLSQRIAE 672
            +  +     D    I E
Sbjct: 1136 KGKRPDTIVDPIDEIIE 1152



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 226/465 (48%), Gaps = 16/465 (3%)

Query: 221  ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL--DNATLTLL-ITAFCDKGFRGSI 277
            +D   + +        G + EA +    ML+ G +L  D+  + L  ++  C+K      
Sbjct: 596  SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNK-----T 650

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
              A  +  E    G   NV ++ ++I  +C+ G   +A  L L L+    Y P+V +Y+ 
Sbjct: 651  ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLL-LMELKGYTPDVISYST 709

Query: 338  MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            +I+GYC+  ++++   L+E+MK++GL PN+ TY S+I   C++     A +    M  +G
Sbjct: 710  VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769

Query: 398  CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              P+   Y  ++DG CK+G ++ A +   +   R++  D +TYT ++S   +  +  +A 
Sbjct: 770  ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 829

Query: 458  GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             LF  M+  GL PDI  +T L+  +C+   +K++ +     I AG  P   TYT++I G 
Sbjct: 830  KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             ++G++ SA +    M +IG  P+  TY ++++GLCK   ++EA +        G++   
Sbjct: 890  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949

Query: 578  VTRVTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHK 634
            VT  TL   YCK G+   A  IL E L K L   I T N L+   C    +       + 
Sbjct: 950  VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009

Query: 635  LLGKDQNVDRVSLAAL-KNACYESN---KYALFSDLSQRIAEGIG 675
            +L K    +  +   L K  C  +N     A++ D+  R  E  G
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 269/559 (48%), Gaps = 40/559 (7%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           +  + +++ GN      V   +V ++ +  +L+EG      + + GL +  +  N ++G 
Sbjct: 169 IVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 228

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             ++G V+ A E++ E+   GV  +  +  +M+ A C+  ++     +LS M ++G   D
Sbjct: 229 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 288

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-------KG 310
             T   LI A+C +G    +++AFEL++ M  KG KP V+T+  +I+GLCK       KG
Sbjct: 289 VVTYNTLINAYCRQGL---LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 345

Query: 311 WTEKAFR------------LFLKLVRSDNYK---------------PNVHTYTAMISGYC 343
             ++  +            L ++  R+DN                 P++ +++A+I    
Sbjct: 346 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 405

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K   +++A      MK  GL P+   YT LI G C+ G    A  + D M ++GC  ++ 
Sbjct: 406 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 465

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN I++GLCK+  + EA EL  +  +R +  D  T+T L++ + K     +A+ LF  M
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++  L PD+  Y TLI  FC+  +M++  + + + I+  ++P   +Y  +I GY   G +
Sbjct: 526 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 585

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A + +  M + G     IT   ++ G C+     +A +F  +M+ KGI P  +T  TL
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              + K+ +   A  ++  ++    +  V   N ++     + R+  A L   K++ +  
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 705

Query: 641 NVDRVSLAALKNACYESNK 659
           N DR +  +L N     N 
Sbjct: 706 NPDRSTYTSLINGHVTQNN 724



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 256/530 (48%), Gaps = 12/530 (2%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PL 186
            F+H ++ +      L+ +     A  V+  MV   + + R++   S+V+   N G  PL
Sbjct: 127 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK-SGVSRVEIVESLVLTYGNCGSNPL 185

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
           +   L R    A +L       E F  + ++G+C   ++   ++    ++G V  A    
Sbjct: 186 VFDLLVRTYVQARKL---REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             ++  G  ++  TL ++I A C       I+     L +M  KG  P+V T+  LI+  
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQ---KIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C++G  E+AF L +  +     KP V TY A+I+G CK  K  RA+ +L+ M + G+ P+
Sbjct: 300 CRQGLLEEAFEL-MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T TY  L+   C+  N   A  + D M  +G  P++ +++A+I  L K G + +A +  +
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 L  D + YTIL+    +     +AL +   M++ G   D+  Y T++   C++K
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            + E+++ F E    G+FP   T+T++I GY +DGN++ AV  F+ M Q    PD +TY 
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI G CK S++++  + +  MI + I P  ++   L   YC  G  + A  + + + +K
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598

Query: 607 LW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +   I T NT+++  C       A  F   +L K    D ++   L N 
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 648



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 187/365 (51%), Gaps = 4/365 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+     + + ++G+  + G ++ A + F +M   G+  D   Y +++  +CR G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            ++EA +    ML++G +LD  T   ++   C +     + +A EL  EM  +G  P+ Y
Sbjct: 444 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM---LSEADELFTEMTERGVFPDFY 500

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LI+G  K G   KA  LF  +++  N KP+V TY  +I G+CK  +M +   L   
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + + PN  +Y  LI G+C +G    A+ L D M ++G    I   N I+ G C+ G 
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A E L     + +  D ITY  L++  +K+    +A  L  +M  +GL PD+  Y  
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++  F RQ +M+E+E    + I  G+ P + TYTS+I G++   N+  A +    M Q G
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739

Query: 538 CAPDN 542
             PD+
Sbjct: 740 FVPDD 744



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +   +   F++V +M N+GL     T N ++      G ++ AE +  +M  RG
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           V  D S+Y  ++  +     + EA R    ML RG + D+
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 242/474 (51%), Gaps = 23/474 (4%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M ++G+     T N +V   C  G  + A  V  +M   G   +A +Y  +V A+CR G 
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V  A+R +  M + G   +  T   ++   C  G    ++ A ++ +EMV++G  P+  +
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAG---RMEDARKVFDEMVKEGLAPDGVS 264

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+ G CK G + +A  +F ++ R     P+V T+T++I   CK   + RA  L+  M
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRK-GIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           +E+GL  N  T+T+LI G CK G  + A   +  M +    P++  YNA+I+G C  GR+
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA EL+++   + ++ D +TY+ +LS + K  +T  A  L  +M++ G+ PD   Y++L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C +K++ ++   F+  I+ GL P + TYTS+I G+ ++GN+  A+     M + G 
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 539 APDNITYGALISGLCKQSKLDEACQ-----FYESMIGKGISPCEVTR----------VTL 583
            PD +TY  LI+GL K ++  EA +     ++E  +   I    + R          + L
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 584 AYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHK 634
              +C +G    A  + +S+  + W       + LI   C E  V M AL FHK
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV-MKALSFHK 616



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 235/460 (51%), Gaps = 19/460 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F   G +     +V  M   GL     T N VV   C+ G +E A +VFDEM   G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  +V  YC++G   EA    + M  +G + D  T T LI   C     G+++
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKA---GNLE 314

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ EM  +G + N  T T LIDG CKKG+ + A  L ++ +R    +P+V  Y A+
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL-LAVREMRQCRIQPSVVCYNAL 373

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC   +M+ A  L+  M+ +G+ P+  TY++++  +CK G+   A+ L   M + G 
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+++I  LC++ R+ +A+ L K      LQ D++TYT L+  H K+   ++AL 
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK-----FFQEAITAGL---------- 503
           L   MVKAG+ PD+  Y+ LI    +  + KE+++     + +E + A +          
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCR 553

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
               ++  +++ G+   G ++ A K +Q +       D   Y  LI G C++  + +A  
Sbjct: 554 NAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALS 613

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           F++ M+  G +P   + ++L     ++G    A  +++ L
Sbjct: 614 FHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 6/388 (1%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+ P+V  +  ++  L          R F   + SD   PNV+TY  ++   C       
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSA--RRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 175

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  +L  M+  G  PN  TY +L+   C+ G  +RA  L+D+M + G  PN+  +N++++
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G+CK GR+++A ++  +  +  L  D ++Y  L+  + K   + +AL +F  M + G+ P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  +T+LI   C+   ++ +    +E    GL   + T+T++I G+ + G +  A+   
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M Q    P  + Y ALI+G C   ++DEA +    M  KG+ P  VT  T+   YCK 
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           GD+ +A  + + + +   +    T ++LIR LC EKR+G A + F  ++      D V+ 
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTY 475

Query: 648 AALKNA-CYESNKYALFSDLSQRIAEGI 674
            +L +  C E N     S   + +  G+
Sbjct: 476 TSLIDGHCKEGNVERALSLHDEMVKAGV 503



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 200/464 (43%), Gaps = 83/464 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + GR+++   +  EM   GL     + N +VG  C++G    A  VF EM  +G
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
           +  D  ++  ++   C+ G +  A   +  M +RG  ++  T T LI  FC KGF     
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G + +A EL+ EM  KG KP+V T++ ++   
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G T  AF+L  +++  +   P+  TY+++I   C+E+++  A +L + M   GL P+
Sbjct: 413 CKNGDTHSAFQLNQQMLE-NGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPD 471

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL-------------- 412
             TYTSLI GHCK GN ERA  L D M K G  P++  Y+ +I+GL              
Sbjct: 472 EVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLF 531

Query: 413 ------------------------------------CKKGRVQEAYELLKKAFQRELQAD 436
                                               C KG + EA ++ +    R    D
Sbjct: 532 KLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLD 591

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
              Y++L+  H ++    +AL    +M++ G  P+  +  +LI     +  + E+++  Q
Sbjct: 592 GSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQ 651

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           + +        E   ++I   L++GN+ + +     M + G  P
Sbjct: 652 QLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 232/478 (48%), Gaps = 28/478 (5%)

Query: 117 LSFFYWAI---GFAKFRHFMRLYIVCATSLISNGN----FERAHEVM------------Q 157
           L   +W I   G     HF    +    +L+ +GN     E AH  M             
Sbjct: 138 LGVVHWMIDDFGLKPDTHFYNRML----NLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFN 193

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++ +     +L+    M+ +M + GL     T   ++    E G ++ A  + ++M   
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF 253

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNATLTLLITAFCDKGFRGS 276
           G      S  ++V  +C+ GRV +A  ++  M ++ G   D  T   L+   C  G    
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG---H 310

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K A E+++ M+++G+ P+VYT+  +I GLCK G  ++A     +++  D   PN  TY 
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD-CSPNTVTYN 369

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +IS  CKE ++  A  L   +  +G+LP+  T+ SLI G C   N   A +L + M  +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P+ + YN +ID LC KG++ EA  +LK+          ITY  L+    K  + ++A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M   G++ +   Y TLI   C+ ++++++ +   + I  G  P K TY S++  
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           + R G+I  A    Q M   GC PD +TYG LISGLCK  +++ A +   S+  KGI+
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIA 607



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 269/579 (46%), Gaps = 28/579 (4%)

Query: 74  YQQFHLRSSPPR--LNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRH 131
           +  F L+ +PP   ++      +      + ++ SL ++A    AL  F  A     F  
Sbjct: 22  HHSFSLKLTPPSSTISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSP 81

Query: 132 FMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE------------- 178
              LY      L  +G+F+   ++++ M +S  E+G     F ++IE             
Sbjct: 82  EPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMG--TSPFLILIESYAQFELQDEILG 139

Query: 179 -----MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
                + + GL   T   NR++ +  +   ++  E    +M   G+  D S++ +++ A 
Sbjct: 140 VVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR  ++  A   L  M   G + D  T T ++  + ++G    +  A  + E+MV  G  
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG---DLDGALRIREQMVEFGCS 256

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            +  +  V++ G CK+G  E A     ++   D + P+ +T+  +++G CK   +  A  
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +++ M ++G  P+  TY S+I G CK+G  + A + +D M    C+PN   YN +I  LC
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+ +V+EA EL +    + +  D  T+  L+         + A+ LF  M   G  PD  
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  LI + C + K+ E+    ++   +G   +  TY ++I G+ +   I  A + F  M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G + +++TY  LI GLCK  ++++A Q  + MI +G  P + T  +L   +C+ GD 
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDI 556

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
             A  I++++     +  I T  TLI  LC   RV +A+
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 204/423 (48%), Gaps = 7/423 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTN-NGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +  +V  F + GR+++  + + EM+N +G      T N +V   C+ G V++A E+ D M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D  +Y  ++   C++G V EA  +L  M+ R    +  T   LI+  C +   
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKEN-- 379

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +++A EL   +  KG  P+V T   LI GLC       A  LF ++ RS   +P+  T
Sbjct: 380 -QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFT 437

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I   C + K++ A  +L++M+  G   +  TY +LI G CK      A ++ D M 
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G + N   YN +IDGLCK  RV++A +L+ +      + DK TY  LL+   +  + K
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIK 557

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +   M   G  PDI  Y TLI+  C+  +++ + K  +     G+  T   Y  +I
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVI 617

Query: 515 CGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKG 572
            G  R    + A+  F+ M  Q   APD ++Y  +  GLC     + EA  F   ++ KG
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677

Query: 573 ISP 575
             P
Sbjct: 678 FVP 680



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 180/364 (49%), Gaps = 5/364 (1%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G KP+V T  VLI  LC+      A  L L+ + S    P+  T+T ++ GY +E  ++ 
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDG 242

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEGCTPNIYAYNAII 409
           A  + E+M E G   +  +   +++G CK G  E A + +  M  ++G  P+ Y +N ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           +GLCK G V+ A E++    Q     D  TY  ++S   K  E K+A+    +M+    +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+   Y TLI+  C++ +++E+ +  +   + G+ P   T+ S+I G     N   A++ 
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F+ M   GC PD  TY  LI  LC + KLDEA    + M   G +   +T  TL   +CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
                 A  I + ++     R   T NTLI  LC  +RV  A+    +++ + Q  D+ +
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFT 542

Query: 647 LAAL 650
             +L
Sbjct: 543 YNSL 546



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G +K+   +V  MT+NG      T   ++   C+ G VE A ++   +  +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG-AILDNATLTLLITAFCDKGFRGSI 277
           +     +Y  ++    R  + TEA      ML++  A  D  +  ++    C+ G  G I
Sbjct: 606 IALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG--GPI 663

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A + L E++ KG+ P   +  +L +GL      E   +L   +++   +        +
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS---EEEVS 720

Query: 338 MISGYCKEEKMNRA 351
           M+ G  K  K   A
Sbjct: 721 MVKGLLKIRKFQDA 734


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 250/522 (47%), Gaps = 27/522 (5%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC--- 199
           +I+ G +  +  +   +V ++   G     + ++ +M   G        N ++G  C   
Sbjct: 103 MITEGCYP-SPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSE 161

Query: 200 ELG--LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           E G  +++ AE+ + EM   GV  +  +        C +G+  +A   +  M+ +G I D
Sbjct: 162 EPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPD 221

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
            +T + +I   C+      +++AF+L +EM R G  P+VY +T LID  CK G+ E+A  
Sbjct: 222 TSTYSKVIGYLCNAS---KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARN 278

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            F ++ R D   PNV TYTA+I  Y K  K+++A  + E M  +G  PN  TYT+LI G 
Sbjct: 279 WFDEMER-DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 378 CKVGNFERAYDLMDLMGKEGCT-----------------PNIYAYNAIIDGLCKKGRVQE 420
           CK G  E+A  +  +M KE                    PN++ Y A++DGLCK  +V+E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +LLK       + + + Y  L+    K  +  +A  +F  M++ G +P+++ Y++LI 
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              + K++  + K   + +     P    YT MI G  + G    A K    M + GC P
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           + +TY A+I G  K  ++++  +  + M  KG +P  VT   L    C  G    A  +L
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577

Query: 601 ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
           E + +  W R V    + +    R  +A+L+    + ++ +V
Sbjct: 578 EEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSV 619



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 228/576 (39%), Gaps = 106/576 (18%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           + C   S  + G+ +E  S+   +        T    +++   CE  L E A +    M 
Sbjct: 13  LGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMR 69

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A     +  +Y++++       ++    R LS M+  G          L+ A+C     G
Sbjct: 70  ASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRS---G 126

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK-------------------------- 309
               A++LL++MV+ G +P    + +LI G+C                            
Sbjct: 127 DYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLN 186

Query: 310 --------------GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
                         G  EKA+ +  +++ S  + P+  TY+ +I   C   K+ +A  L 
Sbjct: 187 KVNISNFSRCLCGIGKFEKAYNVIREMM-SKGFIPDTSTYSKVIGYLCNASKVEKAFQLF 245

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------------------- 396
           + MK  G+ P+   YT+LI   CK G  E+A +  D M ++                   
Sbjct: 246 QEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKS 305

Query: 397 ----------------GCTPNIYAYNAIIDGLCKKGRVQEA---YELLKKAFQRELQADK 437
                           GCTPNI  Y A+IDGLCK G++++A   Y+++KK        D 
Sbjct: 306 RKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDM 365

Query: 438 --------------ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
                          TY  L+    K  + K+A  L   M   G  P+   Y  LI   C
Sbjct: 366 HFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCC 425

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  K+ E+++ F   +  G  P   TY+S+I    +D  +  A+K   +M +  CAP+ +
Sbjct: 426 KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVV 485

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            Y  +I GLCK  K DEA +    M  KG +P  VT   +   + K G     + +L+ +
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 604 DKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             K       T   LI   CS   +  A    HKLL
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEA----HKLL 577



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 157/358 (43%), Gaps = 81/358 (22%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK- 344
           M   G++ + +T       LCK G W E      L L+  + + P+   YT MISG C+ 
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREA-----LSLLEKEEFVPDTVLYTKMISGLCEA 55

Query: 345 ----------------------------------EEKMNRAEMLLERMKEQGLLPNTNTY 370
                                             +EK+ R + +L  M  +G  P+   +
Sbjct: 56  SLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIF 115

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK--------------- 415
            SL++ +C+ G++  AY L+  M + GC P    YN +I G+C                 
Sbjct: 116 NSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAY 175

Query: 416 -------------------------GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
                                    G+ ++AY ++++   +    D  TY+ ++      
Sbjct: 176 GEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNA 235

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
           ++ ++A  LF  M + G+ PD++ YTTLI +FC+   ++++  +F E    G  P   TY
Sbjct: 236 SKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTY 295

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T++I  YL+   +S A + ++ M   GC P+ +TY ALI GLCK  K+++A Q Y+ M
Sbjct: 296 TALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 48/395 (12%)

Query: 137 IVCATSLISN----GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           IV  T+LI      G  E+A ++ + M     EI  +   F +V   +N   P + +   
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE--PNVFTYGA 384

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            V G+ C+   V+ A ++   M   G   +   Y  ++   C+ G++ EA    + ML+ 
Sbjct: 385 LVDGL-CKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443

Query: 253 GAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           G   +  T + LI    D+ F+   +  A ++L +M+     PNV  +T +IDGLCK G 
Sbjct: 444 GYDPNVYTYSSLI----DRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           T++A++L + ++      PNV TYTAMI G+ K  ++ +   LL++M  +G  PN  TY 
Sbjct: 500 TDEAYKLMV-MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558

Query: 372 SLIYGHCKVGNFERAYDLMDLMGK--------------EG-------------------C 398
            LI   C  G  + A+ L++ M +              EG                    
Sbjct: 559 VLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDS 618

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKK--AFQRELQADKITYTILLSEHLKQAETKQA 456
            P    Y  +ID   K GR++ A EL ++  +F     A++  +  L+       +  +A
Sbjct: 619 VPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKA 678

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             L+  M+  G  P++     LI    R  + +E+
Sbjct: 679 FELYADMISRGSIPELSILVHLIKGLLRVNRWEEA 713


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 223/472 (47%), Gaps = 26/472 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC------ELGLVEYAEEVFD 212
           +V S+         + ++  MT  G P      N  +G  C         L++ AE+++ 
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C +G+  +A + +  M+ +G + D +T + +IT  C   
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++AF L +EM   G  P+VYT+T+LID  CK G  E+A  LF ++ RS    P V
Sbjct: 303 ---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTV 358

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MD 391
            TYTA+I  Y K +++ +A  +  RM + G  PN  TY +L+ G CK GN  +A+++   
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 392 LMG---------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           L+G               +    PN+  Y A++DGLCK  +V  A+ELL        + +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            I Y  L+    K  +   A  +F +M K G  P +H YT+LI    +  ++  + K   
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + +     P   TYT+MI G  R G    A+K    M + GC+P+ +TY ALI GL K  
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           K+D +   +  M  KG SP  VT   L    C  G    A ++L  + +  W
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 650



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 220/505 (43%), Gaps = 92/505 (18%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           V++FA     +G+  + F ++ EM   G    TST ++V+   C    VE A  +F EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  D  +Y +++ ++C+ G + +A      M   G      T T LI A+       
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK--- 372

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV------RSDNY- 328
            + QA ++   MV  G +PN  T+  L+DGLCK G   KAF ++ KL+       SD Y 
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 432

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                    PNV TY A++ G CK  K++ A  LL+ M   G  PN   Y +LI G CK 
Sbjct: 433 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 492

Query: 381 GNFERAYD-------------------LMDLMGKEG----------------CTPNIYAY 405
           G  + A +                   L+D M K+G                CTPN+  Y
Sbjct: 493 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
            A+IDGLC+ G  ++A +LL    ++    + +TYT L+    K  +   +L LF +M +
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612

Query: 466 AGLNPDIHAYTTLIAAFCRQK----------KMKES--EKFFQ----------------- 496
            G +P+   Y  LI   C             +MK++   K+ Q                 
Sbjct: 613 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL 672

Query: 497 ----EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALIS 550
               E  + G  P    Y  +I  + + G +  A++  + M ++  +   DN  Y +LI 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
            LC  S+++EA + Y  M  +G  P
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVP 757



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 221/527 (41%), Gaps = 79/527 (14%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA- 248
           T N +V +    G V+    V  EM   G C D  +      A C+ G      RW  A 
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG------RWADAL 95

Query: 249 -MLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
            M++R    LD    T +I+   +  +     +A   L  M      PNV T+  L+ G 
Sbjct: 96  DMIEREDFKLDTVLCTHMISGLMEASY---FDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 307 CKK---GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            KK   GW ++     + ++ ++   PN   + +++  YC E+    A  LL RM   G 
Sbjct: 153 LKKKQLGWCKR----IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 364 LPNTNTYTSL---------------------IYGH--------------------CKVGN 382
            P    Y                        IYG                     C VG 
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F++A+ L+  M ++G  P+   Y+ +I  LC   +V++A+ L ++     +  D  TYTI
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K    +QA  LF  M   G +P +  YT LI A+ + K++ ++   F   + AG
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 503 LFPTKETYTSMICGYLRDGNISSAVK----------------YFQRMNQIGCAPDNITYG 546
             P   TY +++ G  + GNIS A +                YF   ++   AP+ +TYG
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           AL+ GLCK  K+D A +  ++M+  G  P  +    L   +CK G   +A  +   + K 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 607 LWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++ +V+T   LI ++  + R+ +A     ++L      + V+  A+
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 232/559 (41%), Gaps = 44/559 (7%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S   F      + C   +  + GR  +   M+         L T     ++    E   
Sbjct: 66  MSESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASY 122

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            + A      M       +  +Y+ ++  + +  ++    R ++ M+  G   + +    
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK------GWTEKAFR 317
           L+ ++C++        A++LL  M   G  P    + + I  +C +         + A +
Sbjct: 183 LVHSYCNEK---DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 239

Query: 318 LFLKLVRSDNY--KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           ++ +++ ++    K NV  +   +   C   K ++A  L++ M  +G +P+T+TY+ +I 
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCL---CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
             C     E+A+ L   M   G TP++Y Y  +ID  CK G +++A  L ++        
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
             +TYT L+  +LK  +  QA  +F RMV AG  P+   Y  L+   C+   + ++ + +
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416

Query: 496 QEAITAG----------------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            + I                   L P   TY +++ G  +   +  A +    M   GC 
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P++I Y ALI G CK  K+D A + +  M   G  P   T  +L     K G    AM +
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 600 LESLDKKLW---IRTVNTLIRKLC----SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
           L  + K      + T   +I  LC    SEK + + +L   K  G   NV  V+  AL +
Sbjct: 537 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK--GCSPNV--VTYTALID 592

Query: 653 ACYESNKYALFSDLSQRIA 671
              ++ K  L  DL  +++
Sbjct: 593 GLGKAGKIDLSLDLFTQMS 611



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 148/338 (43%), Gaps = 41/338 (12%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V++A E+ D M + G   +   Y  ++  +C+ G++  A      M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 250 LDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
              G +    T T LI    D+ F+ G +  A ++L +M++    PNV T+T +IDGLC+
Sbjct: 506 TKCGYLPSVHTYTSLI----DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G +EKA +L L L+      PNV TYTA+I G  K  K++ +  L  +M  +G  PN  
Sbjct: 562 IGESEKALKL-LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 369 TYTSLIYGHCKVGNFERA---------------------------------YDLMDLMGK 395
           TY  LI   C  G  ++A                                   +++ M  
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES 680

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ--RELQADKITYTILLSEHLKQAET 453
            G  P    Y  +ID   K GR++ A EL K+  +    ++ D   Y  L+      ++ 
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 740

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           ++A  L+  M + G  P++  +  LI      KK  E+
Sbjct: 741 EEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 145/385 (37%), Gaps = 72/385 (18%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------------------F 319
           G++P+  T+  L+  L   G  +  FR+                                
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L ++  +++K +    T MISG  +    + A   L RM+    +PN  TY +L+ G  K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                    ++++M  EGC PN   +N+++   C +     AY+LL +          + 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 440 YTILLSEHLKQ-----------------------------------------AETKQALG 458
           Y I +     Q                                          +  +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++ G  PD   Y+ +I   C   K++++   FQE    G+ P   TYT +I  + 
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G I  A   F+ M  +GC+P  +TY ALI    K  ++ +A   +  M+  G  P +V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T   L    CK G+ + A  +   L
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 21/326 (6%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLI---TSTLNRVVGI 197
           +++S+G  E  H V   ++  F + G++     + ++MT  G LP +   TS ++R+   
Sbjct: 469 AMLSSGC-EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF-- 525

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             + G ++ A +V  +M       +  +Y  M+   CR+G   +A + LS M ++G   +
Sbjct: 526 --KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T T LI      G  G I  + +L  +M RKG  PN  T+ VLI+ LC  G  +KA R
Sbjct: 584 VVTYTALIDGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA-R 639

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L L  ++   +   +  Y   I G+ K    +    +LE M+  G +P    Y  LI   
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCF 697

Query: 378 CKVGNFERAYDL----MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            K G  E A +L    M++        ++YA  ++I  LC   +V+EA+ L  +  +R  
Sbjct: 698 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYA--SLIQALCLASQVEEAFRLYSEMTRRGF 755

Query: 434 QADKITYTILLSEHLKQAETKQALGL 459
             +   +  L+   ++  +  +AL L
Sbjct: 756 VPELSVFVCLIKGLVEVKKWDEALQL 781



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 14/298 (4%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + +K+ G  P+  TY +L+      G  +  + +   M + G   + +        LCK+
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           GR  +A +++++    + + D +  T ++S  ++ +   +A+    RM      P++  Y
Sbjct: 89  GRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            TL++ F ++K++   ++     +T G  P    + S++  Y  + + + A K   RM  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 536 IGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            GC P  + Y   I  +C Q K      LD A + Y  M+       +V     A   C 
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 590 QGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFH--KLLGKDQNV 642
            G    A  +++ + +K ++   +T   +I  LC   +V  A L F   K++G   +V
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 238/486 (48%), Gaps = 13/486 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-----TSTLNRVVGIACELGLVE 205
            H+V   +V SF +    ++ F   +++  N L PL      T   N ++ +  E   ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
             E V+ EM ARG+  D  ++  ++ A CR  +V  A   L  M  RG   D  T T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             F ++G   SI+ A  +   M+  G      T  VLI+G CK G  E A   +++   +
Sbjct: 224 QGFVEEG---SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG-YIQQEIA 279

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D ++P+  TY   ++G C+ + +  A  +++ M ++G  P+  TY  ++   CK G  E 
Sbjct: 280 DGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +++ M   GC P+I  +N +I  LC   R++EA +L ++   + +  D  T+ IL++
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +   AL LF  M  +G  PD   Y TLI   C   K+ ++    ++  + G   
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY ++I G  +   I  A + F +M+  G + + IT+  LI GLCK  K+D+A    
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
             MI +G+ P  +T  ++   YCKQGD   A  ILE++     ++ + T  TLI  LC  
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 623 KRVGMA 628
            R  +A
Sbjct: 580 GRTQVA 585



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 213/421 (50%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+   V +A +V D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y ++V   C+ G++ EA   L+ M+DRG + D  T   LI A C  G R 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC-TGNR- 371

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  ++  KG  P+VYT  +LI+ LCK G    A RLF ++ ++    P+  TY
Sbjct: 372 -LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTY 429

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + N   +N +IDGLCK  ++ +A+ L+ +     LQ + ITY  +L+ + KQ + K+
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  NI  A+  F+ M ++G  PD +TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 575 P 575
           P
Sbjct: 670 P 670



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 197/401 (49%), Gaps = 4/401 (0%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           M+ EM++ G+    +T   ++    E G +E A  V   M   G  A   +  +++  YC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           ++GRV +A  ++   +  G   D  T    +   C     G    A ++++ MV++G  P
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG---HALKVMDVMVQEGHDP 319

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+ ++++ LCK G  E+A  +  ++V      P++ T+  +I+  C   ++  A  L
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMV-DRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             ++  +G+ P+  T+  LI   CKVG+   A  L + M   GCTP+   YN +ID LC 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G++ +A +LLK           ITY  ++    K+   ++A  +F +M   G++ +   
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           + TLI   C+ KK+ ++     + I+ GL P   TY S++  Y + G+I  A    + M 
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             G   D +TYG LI+GLCK  +   A +    M  KG+ P
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G KP+V T   L+  LC+      A  L L+ + S    P+  T+T ++ G+ +E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAV-LMLEEMSSRGVAPDETTFTTLMQGFVEE 229

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +  RM E G      T   LI G+CK+G  E A   +     +G  P+   Y
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  ++GLC+   V  A +++    Q     D  TY I+++   K  + ++A G+  +MV 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 349

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PDI  + TLIAA C   +++E+    ++    G+ P   T+  +I    + G+   
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 409

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     +T  T+  
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             CK+     A  + + +D +   R   T NTLI  LC +K++  A    ++++ +
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G+L +   ++ +M + G P  T T N ++   C+   +E AEEVFD+M  +G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A ++  ++   C+  ++ +A   ++ M+  G   +N T   ++T +C +G    IK
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG---DIK 548

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A ++ L+ +R    +P    Y  +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV-LRGMRIKGMRPTPKAYNPV 607

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           +    +   +  A  L   M E G  P+  TY  +  G C+ G   + A+D M  M  +G
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 398 CTPNIYAYNAIIDGLCKKG 416
             P   ++  + +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 40/341 (11%)

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           ML   +      P    Y  +I     VG  +    L+  M +EG    +   ++ +D  
Sbjct: 60  MLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY 119

Query: 413 CKKGRVQEAYELLKKAFQR--ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +    +A +L+    Q    +QAD + Y  LL+  ++ ++ K    ++  M   G+ P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  + TL+ A CR  +++ +    +E  + G+ P + T+T+++ G++ +G+I +A++  
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            RM ++GC+   +T   LI+G CK  ++++A  + +  I  G  P ++T  T     C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 591 GDSATAMIILESL-----DKKLW---------------------------------IRTV 612
                A+ +++ +     D  ++                                 I T 
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           NTLI  LC+  R+  A     ++  K  + D  +   L NA
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G +K+   ++  MT NG  +   T   ++   C+ G  + A +V   M  +G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ +  R   + +A      M + G   D  T  ++    C  G  G IK
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG--GPIK 654

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+ + EMV KG+ P   +  +L +GL   G  +   R    ++   + +    +  + 
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR---ESDVSA 711

Query: 339 ISGYCKEEK 347
           I GY K  K
Sbjct: 712 IRGYLKIRK 720


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 236/498 (47%), Gaps = 10/498 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SSF  I      F+ +I M    LP +    N ++G   ++     A  +  +M  +G
Sbjct: 58  ILSSFNGIDDAVTLFNHLINM--QPLPSVIQ-FNTIIGSVVKMKHCPVAISLLKQMVFKG 114

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +  + +  YC +G +  A   L  +L RG   +N TLT ++   C     G ++
Sbjct: 115 VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLC---INGEVQ 171

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +  + +  +G   +   +  LI+GLCK G +  AF+L L+ +     KPN+  Y  +
Sbjct: 172 KAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQL-LQEMEGQVVKPNIVIYNMI 230

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +CK+E   +A  L  ++ + G+ P+  TYTSLI G C+ G +     LM  M  +  
Sbjct: 231 IDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNI 290

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+Y +N +ID  C+KG++ EA  +     +R  Q D +T+  L+S H       +A  
Sbjct: 291 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARK 350

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + + G+ PD+ +YT LI  +C+ K++ E+   F E     +      Y+S+I G  
Sbjct: 351 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 410

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G IS A + F  +N  G  P+ ITY  LI   CK   +D   + ++ M GKG++P  +
Sbjct: 411 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 470

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L   YCK      AM +L  +  K       T N+L   LC   R+  A   F  +
Sbjct: 471 TYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530

Query: 636 LGKDQNVDRVSLAALKNA 653
                 VD  +   L +A
Sbjct: 531 HVGGPPVDVATYNVLLDA 548



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 210/436 (48%), Gaps = 6/436 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ +  +G +   FS++  +   G      TL  V+   C  G V+ A +  D + A+G+
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++   C++GR  +A + L  M  +    +     ++I +FC         +
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC---K 242

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A +L  ++V  G  P++ T+T LI G C+ G   +  +L  ++V + N  PNV+T+  +I
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV-NKNINPNVYTFNVLI 301

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
             +C++ KM  A+ +   M ++G  P+  T+ +LI GHC  GN   A  L D + + G  
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++++Y  +I G CK  R+ EA  L  +   + +  D + Y+ L+    K      A  L
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   G  P++  Y  LI AFC+ + +    + F+     GL PT  TY  +I GY +
Sbjct: 422 FSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCK 481

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV- 578
              I  A+     M     APD+ITY +L  GLCK  ++ +A + ++ M   G  P +V 
Sbjct: 482 SKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGG-PPVDVA 540

Query: 579 TRVTLAYEYCKQGDSA 594
           T   L   +CK  D A
Sbjct: 541 TYNVLLDAFCKAQDVA 556



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 3/150 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+   + +   + N+G P    T N ++   C++  ++   E+F  MC +G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y +++  YC+  R+ EA   LS M  +    D+ T   L    C     G I 
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKS---GRIS 521

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            A+EL + M   G   +V T+ VL+D  CK
Sbjct: 522 DAWELFKVMHVGGPPVDVATYNVLLDAFCK 551


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 273/569 (47%), Gaps = 21/569 (3%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYI----------VCATS-----LISNG 147
           V A L ++A   VAL+FFYWA    ++ H   +Y           +C  +     L++  
Sbjct: 166 VCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRR 225

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
             E + E   C++ S++  G+L+    ++  M   G+    S  N  + +  +   +E A
Sbjct: 226 GIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA 285

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
               + M   G+  D  +Y  ++  YC + R+ +A   ++ +  +G   D  +   ++  
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345

Query: 268 FCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            C +     I+Q   L+E+MV+     P+  T+  LI  L K G  + A   FLK     
Sbjct: 346 LCKEK---KIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL-AFLKEAEDK 401

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            +  +   Y+A++  +C++ +M+ A+ L+  M  +   P+  TYT+++ G C++G  + A
Sbjct: 402 GFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEA 461

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++  M K GC PN  +Y A+++GLC  G+  EA E++  + +     + ITY +++  
Sbjct: 462 KKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHG 521

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             ++ +  +A  L   MV+ G  P       LI + C+ +K+ E++K+ +E +  G    
Sbjct: 522 FRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAIN 581

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              +T++I G+ + G++ +A+   + M      PD +TY AL   L K+ +LDEA +   
Sbjct: 582 VVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIV 641

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRV 625
            M+ KG+ P  VT  ++ + YC+ G     + +L+ + K+   RT+ N +I KLC    +
Sbjct: 642 KMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNL 701

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             A     K+L     +D  +   L  +C
Sbjct: 702 EEAEKLLGKVLRTASKLDANTCHVLMESC 730



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 200/476 (42%), Gaps = 7/476 (1%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E A+ ++A L ++      +S+ Y  +GF      +         ++ + N         
Sbjct: 318 EDALELIAGLPSKGCPPDKVSY-YTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++   ++ G   +  + + E  + G  +     + +V   C+ G ++ A+ +  +M +R
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               D  +Y  +V  +CR+GR+ EA + L  M   G   +  + T L+   C  G     
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++   + EE     W PN  T+ V++ G  ++G   +A  L  ++V    + P       
Sbjct: 497 REMINVSEE---HWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEK-GFFPTPVEINL 552

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C+ +K+  A+  LE    +G   N   +T++I+G C++G+ E A  +++ M    
Sbjct: 553 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSN 612

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   Y A+ D L KKGR+ EA EL+ K   + L    +T+  ++  + +       L
Sbjct: 613 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDML 672

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  RMVK    P    Y  +I   C    ++E+EK   + +         T   ++   
Sbjct: 673 NLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESC 730

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           L+ G   SA K   +M +    PD      +   L     L EA +     + +GI
Sbjct: 731 LKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 6/276 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G+L E   +  EM   G       +N ++   C+   V  A++  +E   +G
Sbjct: 518 VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 577

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  +C++G +  A   L  M       D  T T L  A    G +G + 
Sbjct: 578 CAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDAL---GKKGRLD 634

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ +M+ KG  P   T   +I   C+ G  +    L  ++V+    KP    Y  +
Sbjct: 635 EAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR---KPFRTIYNHV 691

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C    +  AE LL ++       + NT   L+    K G    AY +   M +   
Sbjct: 692 IEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNL 751

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           TP++     +   L   G + EA +L+ +  +R +Q
Sbjct: 752 TPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 266/558 (47%), Gaps = 31/558 (5%)

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGF-AKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           Q+  V A LA       A +    A+ F +  RHF+  +I    +  S+     + +++ 
Sbjct: 149 QSFAVAAHLAAVRDPGAARAILVRALRFPSPHRHFVEQFISTYKAFSSD---PVSFDLLL 205

Query: 158 CMVSSFAEIGRLKE-GFSMVIEMTNN---GLPLI-------------TSTLNRVVGIACE 200
             + S   + RL++ G S   E  N     LPL              T + N ++   C 
Sbjct: 206 LCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCT 265

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G ++ A ++FDEM +     D  +Y +MV  YC +  +  A + LS M  RG  L+   
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            T +I   CD+G    +  A  ++E+MV  G   +    T ++ G C+KG    A   F 
Sbjct: 323 YTSVIALLCDEG---QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++ +       V TYTA+I+G C+  ++  AE +L+ M+++GL  +  TYT LI G+CKV
Sbjct: 380 EMQKRGLAADGV-TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A+ + + M ++  TPN+  Y A+ DGLCK+G V  A ELL +   + L+ +  TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++   K    +QA+     M +AGL PD++ YTT+I A C+ K++  +    QE + 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ PT  TY  ++ G+   G +    +  + M +    P+  TY +L+   C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
             + Y+ M+ + + P E T   L   +CK  +   A+     + +K   L   + N LIR
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 618 KLCSEKRVGMAALFFHKL 635
            L  +K+   A   F K+
Sbjct: 679 LLNKKKKFTEARRLFEKM 696



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 195/385 (50%), Gaps = 6/385 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G++ +   +V +M  +G+ L  +    V+   C  G +  A   FDEM  RG
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y  ++   CR G + EA+R L  M D+G  +D  T T+LI  +C  G    + 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG---KMT 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  +MV+K   PNV T+T L DGLCK+G    A  L  ++  S   + N+ TY ++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC-SKGLELNIFTYNSL 501

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK   + +A   +  M E GL P+  TYT++I   C+    +RA+ L+  M  +G 
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P I  YN +++G C  GRV+    LL+   ++ +  +  TY  L+ ++  +   K    
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M+   + P+ + Y  LI   C+ + MKE+  F  E I  G   T  +Y ++I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 519 RDGNISSAVKYFQRMNQ--IGCAPD 541
           +    + A + F++M +  +   PD
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPD 706



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 184/404 (45%), Gaps = 46/404 (11%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A +L +E+  K    N  ++ +L+  LC  G  + A +LF ++       P+V 
Sbjct: 235 RLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP----PDVV 286

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI------------------- 374
           TY  M+ GYC   ++  A  LL  M  +GL  N   YTS+I                   
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 375 ----------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                            G C+ G+   A +  D M K G   +   Y A+I+GLC+ G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA  +L++   + L  D +TYT+L+  + K  +  +A  +  +MV+  + P++  YT L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
               C+Q  +  + +   E  + GL     TY S+I G  + GN+  A++    M++ G 
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  +I  LC+  +LD A    + M+ KGI P  VT   L   +C  G       
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 599 ILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +LE  L+K +   T   N+L+++ C EK +      +  +L ++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 12/336 (3%)

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+    E A +LF +L        N  +Y  ++   C   ++  A  L + M      P
Sbjct: 233 LCRLPLDE-AVQLFQELPEK-----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---P 283

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY  +++G+C +   E A  L+  M   G   N  AY ++I  LC +G+V +A  ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +      +  D   +T ++S   ++ +   A   F  M K GL  D   YT LI   CR 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++KE+E+  QE    GL     TYT +I GY + G ++ A     +M Q    P+ +TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            AL  GLCKQ  +  A +    M  KG+     T  +L    CK G+   AM  +  +D+
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 606 ---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              K  + T  T+I  LC  K +  A     ++L K
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G++ E F +  +M    +     T   +    C+ G V  A E+  EMC++G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+ G + +A R +  M + G   D  T T +I A C       + 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK---ELD 547

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL+EM+ KG KP + T+ VL++G C  G  E   RL L+ +   N  PN  TY ++
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL-LEWMLEKNIHPNTTTYNSL 606

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC E+ M     + + M  Q ++PN NTY  LI GHCK  N + A      M ++G 
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                +YNA+I  L KK +  EA  L +K  +  L A+   Y   +     +   +  L 
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726

Query: 459 LFCRMVKAGL 468
           L   +V+  L
Sbjct: 727 LCDELVEVTL 736



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 143/288 (49%), Gaps = 14/288 (4%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL R+++ G+ P+  +  +++   C++   E      +L  K  C+     YN ++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEKNTCS-----YNILLKALC 264

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GR+++A++L  +        D +TY I++  +   +E + A+ L   M   GL  +  
Sbjct: 265 TAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           AYT++IA  C + ++ ++ +  ++ +  G+      +T+++ G+ R G++++A  +F  M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G A D +TY ALI+GLC+  +L EA +  + M  KG+    VT   L   YCK G  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 594 ATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGK 638
             A ++   + +K     V T   L   LC +  V  A    H++  K
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 263/586 (44%), Gaps = 46/586 (7%)

Query: 35  HHHNFLANS--KQPAFSSTSSSPSPPQSLVKTVC-SMVLESYYQQFHLRSSPPRLNLQID 91
           +HH+FL ++  K+P+    +       S    VC    L S+Y+   +   P  +     
Sbjct: 42  NHHHFLTSTSTKKPSLPKNNDGFVSNNS--NNVCVDDALASFYRMVRINPRPSVVEFGKF 99

Query: 92  IDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER 151
           + S   ++  + V SL N+                      M L+ V             
Sbjct: 100 LGSFAKKKQYSTVVSLCNQ----------------------MDLFRV------------- 124

Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
            H V  +  +++    +  +    S++ +M   G+     T N ++   C  G ++ A E
Sbjct: 125 THNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVE 184

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F+EM  RG   +  SY  ++   C+ G  + A      M   G   +  T + +I + C
Sbjct: 185 LFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLC 244

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                  +  A E L EMV +G  PNV+T+  ++ G C  G   +A RLF ++V  D   
Sbjct: 245 KDRL---VNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD-VM 300

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  T+T ++ G CKE  ++ A ++ E M E+G+ P+ +TY +L+ G+C       A  +
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            ++M ++GC P  ++YN +I+G CK  R+ EA  LL + + + L  D +TY+ L+    +
Sbjct: 361 FEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               K+AL LF  M   G +P++  Y  L+  FC+   + E+ K  +      L P    
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT +I G    G +  A + F ++   G  PD  TY  +I GL K+   DEA   +  M 
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
             G  P   +   +   + +  DS+TA+ +++ +  K +   ++T 
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 195/387 (50%), Gaps = 7/387 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +L +LI   C       +  +  +L +M + G  P+  T   LI+GLC +G  ++A  LF
Sbjct: 130 SLNILINCLCR---LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++V+   ++PNV +YT +I+G CK    + A  + ++M++ G  PN  TY+++I   CK
Sbjct: 187 NEMVKR-GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                 A + +  M + G  PN++ YN+I+ G C  G++ EA  L K+   R++  + +T
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT 305

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +TIL+    K+    +A  +F  M + G+ PDI  Y  L+  +C Q+ M E++K F+  I
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   +Y  +I GY +   +  A      M      PD +TY  L+ GLC+  +  
Sbjct: 366 RKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTVN--TLI 616
           EA   ++ M   G  P  VT V L   +CK G    A+ +L+S+ +KKL    V+   LI
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVD 643
             +    ++ +A   F KL G     D
Sbjct: 486 EGMFIAGKLEVAKELFSKLFGDGTRPD 512



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 157/321 (48%), Gaps = 4/321 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F  +G+L E   +  EM    +   T T   +V   C+ G+V  A  VF+ M  +G
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D S+Y  ++  YC    + EA +    M+ +G      +  +LI  +C K  R  + 
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC-KSRR--MD 390

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL EM  K   P+  T++ L+ GLC+ G  ++A  LF ++  S    PN+ TY  +
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC-SYGPHPNLVTYVIL 449

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CK   ++ A  LL+ MKE+ L PN   YT LI G    G  E A +L   +  +G 
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y  +I GL K+G   EAY+L +K        +  +Y +++   L+  ++  A+ 
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569

Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
           L   MV    + ++  +  L+
Sbjct: 570 LIDEMVGKRFSVNLSTFQMLL 590



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 170/342 (49%), Gaps = 4/342 (1%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   F ++VR  N +P+V  +   +  + K+++ +    L  +M    +  N  +  
Sbjct: 74  VDDALASFYRMVRI-NPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLN 132

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C++ + + +  ++  M K G  P+   +NA+I+GLC +G+++EA EL  +  +R
Sbjct: 133 ILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKR 192

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             + + I+YT +++   K   T  A+ +F +M + G  P++  Y+T+I + C+ + + ++
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +F  E +  G+ P   TY S++ G+   G ++ A + F+ M      P+ +T+  L+ G
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LW 608
           LCK+  + EA   +E+M  KG+ P   T   L   YC Q     A  + E + +K     
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             + N LI   C  +R+  A     ++  K  N D V+ + L
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 39/287 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G + E   +   MT  G+    ST N ++   C   L+  A++VF+ M  +G
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A SY +++  YC+  R+ EA   L+ M  +    D  T + L+   C     G  K
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ---LGRPK 425

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------- 318
           +A  L +EM   G  PN+ T+ +L+DG CK G  ++A +L                    
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485

Query: 319 ---------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                          F KL   D  +P++ TYT MI G  KE   + A  L  +M++ G 
Sbjct: 486 EGMFIAGKLEVAKELFSKLF-GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           LPN+ +Y  +I G  +  +   A  L+D M  +  + N+  +  ++D
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 213/438 (48%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L+E   +V EM  +G      T N ++    + G +E A   F EM   G
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  +    V A+C+ G V EA +  + M  RG + +  T T L+   C  G    + 
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG---RLD 356

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EMV +G  PNV T+TV++DGLCK+G    A  + L L+     K N   YT +
Sbjct: 357 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDV-LSLMERAGVKANELLYTTL 415

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+   +   RA  LL  MK +G+  + + Y +LI+G CKV   + A  L+  M   G 
Sbjct: 416 IHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGL 475

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  I+D   K G+  EA  LL K     LQ + +TY  L+    K     +A+ 
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M + GL+P++  YTTLI  FC+   + ++     E +  G+   K  YTS+I G++
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G++  A     +M + G   D   Y   ISG C  + + EA      MIG GI+P + 
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 655

Query: 579 TRVTLAYEYCKQGDSATA 596
               L  +Y K G+   A
Sbjct: 656 AYNCLIRKYQKLGNMEEA 673



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C+ G +  A  +F  M A G   D  +Y  ++  Y + G + E +  +S M
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  T   LI  F   G+   I++A+    EM R G   NV T +  +D  CK+
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGW---IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A +LF ++ R     PN  TYT+++ G CK  +++ A +LL+ M  QGL+PN  T
Sbjct: 318 GLVREAMKLFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT ++ G CK G    A D++ LM + G   N   Y  +I G       + A +LL +  
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + ++ D   Y  L+    K  +  +A  L  +M   GL P+   YTT++ AF +  K  
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+     +   +GL P   TY ++I G  + G+I  A+ +F +M ++G  P+   Y  LI
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
            G CK   L +A      M+ KG+S  +V   +L   + KQGD
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGD 599



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 225/462 (48%), Gaps = 15/462 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV---GIACELGLVEYAEEVF 211
           V   ++S  A+ G L +    +  +    +P  T T N ++       + GLV     +F
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVR---RLF 191

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + + A  V     ++ +++   C+ G + EA      M   G   D  T   LI  +   
Sbjct: 192 EHLPAPNV----FTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGY--- 244

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G  G +++   L+ EM + G   +V T+  LI+   K GW EKA+  F ++ R      N
Sbjct: 245 GKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL-GVMAN 303

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T +  +  +CKE  +  A  L  +M+ +G++PN  TYTSL+ G CK G  + A  L+D
Sbjct: 304 VVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 363

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  Y  ++DGLCK+G+V  A ++L    +  ++A+++ YT L+  H    
Sbjct: 364 EMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNK 423

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
            +++AL L   M   G+  D+  Y TLI   C+ +K+ E++    +    GL P    YT
Sbjct: 424 NSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYT 483

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++  + + G  S AV    ++   G  P+ +TY ALI GLCK   + EA   ++ M   
Sbjct: 484 TIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMREL 543

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV 612
           G+ P      TL   +CK G  + A+ ++ E +DK + +  V
Sbjct: 544 GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKV 585



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 159/345 (46%), Gaps = 10/345 (2%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V+    L+  L   G  + A R   + VR     PN  T   ++    +    NR   
Sbjct: 133 PSVFD--TLLSLLADHGLLDDAVRALAR-VRQLRVPPNTRTCNHILLRLAR----NRQGG 185

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L+ R+ E    PN  T+  +I   CK G    A  L   M   GC+P++  YN++IDG  
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G ++E   L+ +  +    AD +TY  L++   K    ++A   F  M + G+  ++ 
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
             +T + AFC++  ++E+ K F +    G+ P + TYTS++ G  + G +  A+     M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  P+ +TY  ++ GLCK+ K+  A      M   G+   E+   TL + +    +S
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             A+ +L  +  K   L +    TLI  LC  +++  A    HK+
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 186/696 (26%), Positives = 282/696 (40%), Gaps = 126/696 (18%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA---HEVM--- 156
           V A L +   +  A+SFF WA   A F+H +  Y      L++  N+ +    HE M   
Sbjct: 89  VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148

Query: 157 ---------QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                      ++ SFA   R  +  +    M          T   +V   C+ G+ E A
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 208 EEVFDEMCARGVC------------------------------------ADASSYKLMVV 231
            EVF EM A G                                       DA +Y  M+ 
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD----------------KGFR- 274
              + G   EA + L  ML +  +    T  +L+ + C                  GFR 
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 275 ---------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
                          G +K+A  L +EMV  G++P+V THTV+IDGLCK G  E+A + F
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            +++R    KPNV TYT +I G  K  ++  A  +++ M   G  P++ TY  L+ G CK
Sbjct: 389 EEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYN--------------------------------- 406
           +G  + A  L+D + K   +PN+  Y+                                 
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPG 507

Query: 407 ---AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK--QALGLFC 461
              +II GLCK GR+ EA  + ++      + D  TY IL++   +  E +  +A  L  
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            +   G  PD   YT L    C+  ++  + K  +EA + G       YT++  G    G
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  AV  FQ M + G APD   Y  +I+GL K  KL++AC+F++ MIGKG  P   T  
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 582 TLAYEYCKQGDSATAMIILES-LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLG 637
            L    C  G+   A    E  L +   + +V   + LI   C   +V  A   F  ++ 
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
           +      V+ A+L +    S K     +L Q +A G
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 214/511 (41%), Gaps = 93/511 (18%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMT 180
           Y +   SL   G  ERA E+ + M +S               FA+ GR+KE  S+  EM 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G      T   ++   C+ G  E A + F+EM   G   +  +Y  ++    ++GRV 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            A R +  M+  G   D+ T   L+  FC     G + +A +LL+E+ +    PN+  ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCK---LGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 301 VLIDGLC------------------------------------KKGWTEKAFRLFLKLVR 324
            L+ GLC                                    K G  ++A R+F ++V 
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV- 533

Query: 325 SDNYKPNVHTYTAMISGYCK--EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           S+  KP+  TY  +I+G C+  E ++ RA  LL  ++  G LP+  TYT L  G CK+G 
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            +RA  +++     G   ++ AY A+  GLC +G+V  A  L ++  ++    D   Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL------------------------ 478
           +++  +K  + + A   F  M+  G  P +  YT L                        
Sbjct: 654 IINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713

Query: 479 ------------IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
                       I  FC+  K+  + K F++ I+ G  PT  T  S+  G +R G    A
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  Q M   G  P   T+ A++ GL K  +
Sbjct: 774 QELLQEMAAGGSPPHAATFTAILDGLRKSDE 804



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 8/307 (2%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM--GRVTEADRWLSAMLD 251
           +VG+ C+ G ++ A  +F  M + G   DA++Y +++   CR    RV  A   L  +  
Sbjct: 513 IVGL-CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G + D  T T L    C  G    + +A ++LEE   +GW  +V  +T L  GLC +G 
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIG---EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A  LF ++VR     P+   Y  +I+G  K +K+  A    + M  +G  P   TYT
Sbjct: 629 VDRAVSLFQEMVRQGG-APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           +L+   C  GN + A+   + M   G    ++  Y+A+I G CK  +V  A +L +    
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           R      +T   L    ++  +T++A  L   M   G  P    +T ++    +  +  +
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807

Query: 491 SEKFFQE 497
             K  QE
Sbjct: 808 LLKLVQE 814



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 7/304 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL--GLVEYAEEVFDEMCA 216
           ++    + GRL E   +   M + G     +T N ++   C      VE A  +  ++  
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   DA +Y  + +  C++G V  A + L     RG   D    T L T  C   ++G 
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC---YQGQ 628

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  L +EMVR+G  P+   +  +I+GL K    E A + F +++     KP V TYT
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI-GKGQKPTVATYT 687

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           A++   C    ++ A    E M  +G L+ +   Y +LI+G CK    + A  L + M  
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P      ++ DGL + G+ ++A ELL++           T+T +L    K  E+ +
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807

Query: 456 ALGL 459
            L L
Sbjct: 808 LLKL 811


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 155/547 (28%), Positives = 251/547 (45%), Gaps = 13/547 (2%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS--SFAEIGRLKEG 172
           VAL FF W +    F+    ++      L+ N     A+ VM+ +VS      +  L  G
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAG 160

Query: 173 FSMVI----EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
               +    +M  NGL       NR++ +  +  L+  A+ V+  M   G+     +Y  
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           M+ +YC+ GRV +A   LS M +RG   ++ T  +L+     K   G ++QA  L+EEM+
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKK---GELEQAKGLIEEML 277

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G   + YT+  LI+G C+KG   +AF L  ++V    + P + TY  ++ G CK  ++
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PTLSTYNTLMYGLCKWVQV 336

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
               +    M +    P+  ++ SL+YG+C+ G    A+ L D +      P +  YN +
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTL 396

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GLC  G +  A  L K+   + L  D  TYTIL++   K      A G F  M+  GL
Sbjct: 397 IHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD  AY T I    +      +    +E + AG  P   TY   +    + GN   A  
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY- 587
             + M   G  PD++TY ++I+G  K   L +A + +  M+ KG++P  VT   L + + 
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 588 CKQGDSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            KQ      M   + L+K +   + T N +I  LC  +R+  A  +F ++  K    ++ 
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 646 SLAALKN 652
           S   L N
Sbjct: 637 SYTILIN 643



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 199/421 (47%), Gaps = 4/421 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+  ++ G L++   ++ EM N+GL +   T N ++   C+ GL   A ++ +EM  R 
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                S+Y  ++   C+  +VT      S ML      D  +   L+  +C  G    I 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTG---CIS 372

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L +E+  +   P V T+  LI GLC  G+ + A RL  K +      P++ TYT +
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL-KKEMTDQGLFPDIFTYTIL 431

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G  K   ++ A      M  +GL P+   Y + I G  K+ +   A+ + + M   G 
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN  +  LC++G  +EA +LL+      L  D +TYT +++  +K    ++A  
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G+ P +  YT LI A   ++ +  +  +F + +   +     TY ++I G  
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A KYF  M + G  P+  +Y  LI+  C     +EA + Y  M+ + I P   
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF 671

Query: 579 T 579
           T
Sbjct: 672 T 672



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 5/411 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   E F +V EM N       ST N ++   C+   V      F +M    
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  S+  ++  YCR G ++EA      +  R  +    T   LI   C  G+   + 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY---LD 407

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM  +G  P+++T+T+L++G  K G+   A R F   + S   KP+   Y   
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA-RGFFNEMLSKGLKPDRFAYNTR 466

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K    + A  + E M   G  P+  TY   ++  C+ GNFE A DL++ M  +G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y +II+G  K G +++A E+  +   + +    +TYT+L+  H  +     A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M++  +  ++  Y  +I   C  ++M E+ K+F E    G+ P K +YT +I    
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
             G    A++ ++ M      PD+ T+   +  L +  ++  A Q  ES+I
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESLI 696


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 266/558 (47%), Gaps = 31/558 (5%)

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGF-AKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           Q+  V A LA       A +    A+ F +  RHF+  +I    +  S+     + +++ 
Sbjct: 149 QSFAVAAHLAAVRDPGAARAILVRALRFPSPHRHFVEQFISTYKAFSSD---PVSFDLLL 205

Query: 158 CMVSSFAEIGRLKE-GFSMVIEMTNN---GLPLI-------------TSTLNRVVGIACE 200
             + S   + RL++ G S   E  N     LPL              T + N ++   C 
Sbjct: 206 LCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCT 265

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G ++ A ++FDEM +     D  +Y +MV  YC +  +  A + LS M  RG  L+   
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            T +I   CD+G    +  A  ++E+MV  G   +    T ++ G C+KG    A   F 
Sbjct: 323 YTSVIALLCDEG---QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++ +       V TYTA+I+G C+  ++  AE +L+ M+++GL  +  TYT LI G+CKV
Sbjct: 380 EMQKRGLAADGV-TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A+ + + M ++  TPN+  Y A+ DGLCK+G V  A ELL +   + L+ +  TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++   K    +QA+     M +AGL PD++ YTT+I A C+ K++  +    QE + 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ PT  TY  ++ G+   G +    +  + M +    P+  TY +L+   C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
             + Y+ M+ + + P E T   L   +CK  +   A+     + +K   L   + N LIR
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 618 KLCSEKRVGMAALFFHKL 635
            L  +K+   A   F K+
Sbjct: 679 LLNKKKKFTEARRLFEKM 696



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 6/385 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G++ +   +V +M  +G+ L  +    V+   C  G +  A   FDEM  RG
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y  ++   CR G + EA+R L  M D+G  +D  T T+LI  +C  G    + 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG---KMT 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  +MV+K   PNV T+T L DGLCK+G    A  L  ++  S   + N+ TY ++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC-SKGLELNIFTYNSL 501

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK   + +A   +  M E GL P+  TYT++I   C+    +RA+ L+  M  +G 
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P I  YN +++G C  GRV+    LL+   ++ +  +  TY  L+ ++  +   K    
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M+   + P+ + Y  LI   C+ + MKE+  F  E I  G   T  +Y ++I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 519 RDGNISSAVKYFQRM--NQIGCAPD 541
           +    + A + F++M  +++   PD
Sbjct: 682 KKKKFTEARRLFEKMRKDRLTAEPD 706



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 184/404 (45%), Gaps = 46/404 (11%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A +L +E+  K    N  ++ +L+  LC  G  + A +LF ++       P+V 
Sbjct: 235 RLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP----PDVV 286

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI------------------- 374
           TY  M+ GYC   ++  A  LL  M  +GL  N   YTS+I                   
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 375 ----------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                            G C+ G+   A +  D M K G   +   Y A+I+GLC+ G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA  +L++   + L  D +TYT+L+  + K  +  +A  +  +MV+  + P++  YT L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
               C+Q  +  + +   E  + GL     TY S+I G  + GN+  A++    M++ G 
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  +I  LC+  +LD A    + M+ KGI P  VT   L   +C  G       
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 599 ILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +LE  L+K +   T   N+L+++ C EK +      +  +L ++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 12/336 (3%)

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+    E A +LF +L        N  +Y  ++   C   ++  A  L + M      P
Sbjct: 233 LCRLPLDE-AVQLFQELPEK-----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---P 283

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY  +++G+C +   E A  L+  M   G   N  AY ++I  LC +G+V +A  ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +      +  D   +T ++S   ++ +   A   F  M K GL  D   YT LI   CR 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++KE+E+  QE    GL     TYT +I GY + G ++ A     +M Q    P+ +TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            AL  GLCKQ  +  A +    M  KG+     T  +L    CK G+   AM  +  +D+
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 606 ---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              K  + T  T+I  LC  K +  A     ++L K
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G++ E F +  +M    +     T   +    C+ G V  A E+  EMC++G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+ G + +A R +  M + G   D  T T +I A C       + 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK---ELD 547

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL+EM+ KG KP + T+ VL++G C  G  E   RL L+ +   N  PN  TY ++
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL-LEWMLEKNIHPNTTTYNSL 606

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC E+ M     + + M  Q ++PN NTY  LI GHCK  N + A      M ++G 
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                +YNA+I  L KK +  EA  L +K  +  L A+   Y   +     +   +  L 
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLA 726

Query: 459 LFCRMVKAGL 468
           L   +V+  L
Sbjct: 727 LCDELVEVTL 736



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 14/303 (4%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL R+++ G+ P+  +  +++   C++   E      +L  K  C+     YN ++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEKNTCS-----YNILLKALC 264

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GR+++A++L  +        D +TY I++  +   +E + A+ L   M   GL  +  
Sbjct: 265 TAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           AYT++IA  C + ++ ++ +  ++ +  G+      +T+++ G+ R G++++A  +F  M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G A D +TY ALI+GLC+  +L EA +  + M  KG+    VT   L   YCK G  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 594 ATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A ++   + +K     V T   L   LC +  V  A    H++  K   ++  +  +L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 651 KNA 653
            N 
Sbjct: 502 ING 504


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 266/558 (47%), Gaps = 31/558 (5%)

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGF-AKFRHFMRLYIVCATSLISNG-NFERAHEVM 156
           Q+  V A LA       A +    A+ F +  RHF+  +I    +  S+  +F+    ++
Sbjct: 149 QSFAVAAHLAAVRDPGAARAILVRALRFPSPHRHFVEQFISTYKAFSSDPVSFDL---LL 205

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNN---GLPLI-------------TSTLNRVVGIACE 200
            C+ S+   +   + G S   E  N     LPL              T + N ++   C 
Sbjct: 206 LCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCT 265

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G ++ A ++FDEM +     D  +Y +MV  YC +  +  A + LS M  RG  L+   
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            T +I   CD+G    +  A  ++E+MV  G   +    T ++ G C+KG    A   F 
Sbjct: 323 YTSVIALLCDEG---QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++ +       V TYTA+I+G C+  ++  AE +L+ M+++GL  +  TYT LI G+CKV
Sbjct: 380 EMQKRGLAADGV-TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A+ + + M ++  TPN+  Y A+ DGLCK+G V  A ELL +   + L+ +  TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++   K    +QA+     M +AGL PD++ YTT+I A C+ K++  +    QE + 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ PT  TY  ++ G+   G +    +  + M +    P+  TY +L+   C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
             + Y+ M+ + + P E T   L   +CK  +   A+     + +K   L   + N LIR
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 618 KLCSEKRVGMAALFFHKL 635
            L  +K+   A   F K+
Sbjct: 679 LLNKKKKFTEARRLFEKM 696



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 195/385 (50%), Gaps = 6/385 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G++ +   +V +M  +G+ L  +    V+   C  G +  A   FDEM  RG
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y  ++   CR G + EA+R L  M D+G  +D  T T+LI  +C  G    + 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG---KMT 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  +MV+K   PNV T+T L DGLCK+G    A  L  ++  S   + N+ TY ++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC-SKGLELNIFTYNSL 501

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK   + +A   +  M E GL P+  TYT++I   C+    +RA+ L+  M  +G 
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P I  YN +++G C  GRV+    LL+   ++ +  +  TY  L+ ++  +   K    
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M+   + P+ + Y  LI   C+ + MKE+  F  E I  G   T  +Y ++I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 519 RDGNISSAVKYFQRM--NQIGCAPD 541
           +    + A + F++M   ++   PD
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPD 706



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 184/404 (45%), Gaps = 46/404 (11%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A +L +E+  K    N  ++ +L+  LC  G  + A +LF ++       P+V 
Sbjct: 235 RLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP----PDVV 286

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI------------------- 374
           TY  M+ GYC   ++  A  LL  M  +GL  N   YTS+I                   
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 375 ----------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                            G C+ G+   A +  D M K G   +   Y A+I+GLC+ G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA  +L++   + L  D +TYT+L+  + K  +  +A  +  +MV+  + P++  YT L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
               C+Q  +  + +   E  + GL     TY S+I G  + GN+  A++    M++ G 
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  +I  LC+  +LD A    + M+ KGI P  VT   L   +C  G       
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 599 ILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +LE  L+K +   T   N+L+++ C EK +      +  +L ++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 12/336 (3%)

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+    E A +LF +L        N  +Y  ++   C   ++  A  L + M      P
Sbjct: 233 LCRLPLDE-AVQLFQELPEK-----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---P 283

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY  +++G+C +   E A  L+  M   G   N  AY ++I  LC +G+V +A  ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +      +  D   +T ++S   ++ +   A   F  M K GL  D   YT LI   CR 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++KE+E+  QE    GL     TYT +I GY + G ++ A     +M Q    P+ +TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            AL  GLCKQ  +  A +    M  KG+     T  +L    CK G+   AM  +  +D+
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 606 ---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              K  + T  T+I  LC  K +  A     ++L K
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G++ E F +  +M    +     T   +    C+ G V  A E+  EMC++G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+ G + +A R +  M + G   D  T T +I A C       + 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK---ELD 547

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL+EM+ KG KP + T+ VL++G C  G  E   RL L+ +   N  PN  TY ++
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL-LEWMLEKNIHPNTTTYNSL 606

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC E+ M     + + M  Q ++PN NTY  LI GHCK  N + A      M ++G 
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                +YNA+I  L KK +  EA  L +K  +  L A+   Y   +     +   +  L 
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726

Query: 459 LFCRMVKAGL 468
           L   +V+  L
Sbjct: 727 LCDELVEVTL 736



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 14/303 (4%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL R+++ G+ P+  +  +++   C++   E      +L  K  C+     YN ++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEKNTCS-----YNILLKALC 264

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GR+++A++L  +        D +TY I++  +   +E + A+ L   M   GL  +  
Sbjct: 265 TAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           AYT++IA  C + ++ ++ +  ++ +  G+      +T+++ G+ R G++++A  +F  M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G A D +TY ALI+GLC+  +L EA +  + M  KG+    VT   L   YCK G  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 594 ATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A ++   + +K     V T   L   LC +  V  A    H++  K   ++  +  +L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 651 KNA 653
            N 
Sbjct: 502 ING 504


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 155/547 (28%), Positives = 251/547 (45%), Gaps = 13/547 (2%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS--SFAEIGRLKEG 172
           VAL FF W +    F+    ++      L+ N     A+ VM+ +VS      +  L  G
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAG 160

Query: 173 FSMVI----EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
               +    +M  NGL       NR++ +  +  L+  A+ V+  M   G+     +Y  
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           M+ +YC+ GRV +A   LS M +RG   ++ T  +L+     K   G ++QA  L+EEM+
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKK---GELEQAKGLIEEML 277

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G   + YT+  LI+G C+KG   +AF L  ++V    + P + TY  ++ G CK  ++
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PTLSTYNTLMYGLCKWVQV 336

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
               +    M +    P+  ++ SL+YG+C+ G    A+ L D +      P +  YN +
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTL 396

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GLC  G +  A  L K+   + L  D  TYTIL++   K      A G F  M+  GL
Sbjct: 397 IHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD  AY T I    +      +    +E + AG  P   TY   +    + GN   A  
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY- 587
             + M   G  PD++TY ++I+G  K   L +A + +  M+ KG++P  VT   L + + 
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 588 CKQGDSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            KQ      M   + L+K +   + T N +I  LC  +R+  A  +F ++  K    ++ 
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 646 SLAALKN 652
           S   L N
Sbjct: 637 SYTILIN 643



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 199/421 (47%), Gaps = 4/421 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+  ++ G L++   ++ EM N+GL +   T N ++   C+ GL   A ++ +EM  R 
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                S+Y  ++   C+  +VT      S ML      D  +   L+  +C  G    I 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTG---CIS 372

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L +E+  +   P V T+  LI GLC  G+ + A RL  K +      P++ TYT +
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL-KKEMTDQGLFPDIFTYTIL 431

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G  K   ++ A      M  +GL P+   Y + I G  K+ +   A+ + + M   G 
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN  +  LC++G  +EA +LL+      L  D +TYT +++  +K    ++A  
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G+ P +  YT LI A   ++ +  +  +F + +   +     TY ++I G  
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A KYF  M + G  P+  +Y  LI+  C     +EA + Y  M+ + I P   
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF 671

Query: 579 T 579
           T
Sbjct: 672 T 672



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 5/411 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   E F +V EM N       ST N ++   C+   V      F +M    
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  S+  ++  YCR G ++EA      +  R  +    T   LI   C  G+   + 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY---LD 407

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM  +G  P+++T+T+L++G  K G+   A R F   + S   KP+   Y   
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA-RGFFNEMLSKGLKPDRFAYNTR 466

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K    + A  + E M   G  P+  TY   ++  C+ GNFE A DL++ M  +G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y +II+G  K G +++A E+  +   + +    +TYT+L+  H  +     A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +M++  +  ++  Y  +I   C  ++M E+ K+F E    G+ P K +YT +I    
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
             G    A++ ++ M      PD+ T+   +  L +  ++  A Q  ES+I
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESLI 696


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 234/456 (51%), Gaps = 11/456 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW-L 246
           T   + +V   CEL     A E F  +  +G   +  +   M+  + ++ R   A  W L
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMA--WVL 203

Query: 247 SAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            A + R  I  +  T  ++I   C +G    +K+A E +  M   G KPNV T+  +I G
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEG---KLKKAKEFIGHMETLGVKPNVVTYNTIIHG 260

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            C +G  ++A R+  + ++    +P+ +TY + ISG CKE ++  A  L+ +M E GL+P
Sbjct: 261 HCLRGKFQRA-RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVP 319

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  TY +LI G+C  G+ ++AY   D M  +G   ++  YN  I  L  +GR+ +A  ++
Sbjct: 320 NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMI 379

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           K+  ++ +  D +T+ IL++ + +  + K+A GL   MV  G+ P +  YT+LI    ++
Sbjct: 380 KEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKR 439

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            +MKE++  F +    GL P    + ++I G+  +GNI  A +  + M+ +   PD ITY
Sbjct: 440 NRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITY 499

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             L+ G C++ K++EA Q  + M  +GI P  ++  TL   Y K+GD   A  + + +  
Sbjct: 500 NTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             +   I T N LI+ LC  +    A     +++ K
Sbjct: 560 TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSK 595



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 217/441 (49%), Gaps = 4/441 (0%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           LI    F    E    M+S F ++ R +  + +  EM    +     T N ++ + C+ G
Sbjct: 171 LIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEG 230

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A+E    M   GV  +  +Y  ++  +C  G+   A      M D+G   D  T  
Sbjct: 231 KLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYN 290

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
             I+  C +G    +++A  L+ +M+  G  PN  T+  LIDG C KG  +KA+    ++
Sbjct: 291 SFISGLCKEG---RLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S     ++ TY   I     E +M  A+ +++ M+E+G++P+  T+  LI G+C+ G+
Sbjct: 348 I-SKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            +RA+ L+D M  +G  P +  Y ++I  L K+ R++EA  L  K  Q  L  D I +  
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H       +A  L   M    + PD   Y TL+  +CR+ K++E+ +   E    G
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   +Y ++I GY + G++  A +    M   G  P  +TY ALI GLCK  + + A 
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586

Query: 563 QFYESMIGKGISPCEVTRVTL 583
           +  + M+ KGI+P + T +++
Sbjct: 587 ELLKEMVSKGITPDDSTYLSI 607



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 199/394 (50%), Gaps = 4/394 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+LK+    +  M   G+     T N ++   C  G  + A  +F  M  +G
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y   +   C+ GR+ EA   +  ML+ G + +  T   LI  +C+KG    + 
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKG---DLD 338

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+   +EM+ KG   ++ T+ + I  L  +G    A  + +K +R     P+  T+  +
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM-IKEMREKGMMPDAVTHNIL 397

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+     RA  LL+ M  +G+ P   TYTSLIY   K    + A  L   + +EG 
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  +NA+IDG C  G +  A++LLK+    ++  D+ITY  L+  + ++ + ++A  
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ PD  +Y TLI+ + ++  MK++ +   E +T G  PT  TY ++I G  
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           ++     A +  + M   G  PD+ TY ++I  +
Sbjct: 578 KNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score = 42.4 bits (98), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++S +++ G +K+ F +  EM   G      T N ++   C+    E+AEE+  
Sbjct: 531 HISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLK 590

Query: 213 EMCARGVCADASSYKLMVVA 232
           EM ++G+  D S+Y  ++ A
Sbjct: 591 EMVSKGITPDDSTYLSIIEA 610


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 208/392 (53%), Gaps = 4/392 (1%)

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           E G VE+   V+ EM  R +  +  ++  ++   C++G++ +A   +  M   G   +  
Sbjct: 210 EFGGVEF---VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVV 266

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T   LI  +C  G  G + +A  +L+EMV     PN  T  VLIDG CK      A ++F
Sbjct: 267 TYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVF 326

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++ +S   KP V TY ++++G C E K+N A++LL+ M    L PN  TY +LI G+CK
Sbjct: 327 EEM-QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
               E A +L D +GK+G TPN+  +N ++ G CK G+++EA+ L K   ++    +  T
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+    ++ + ++   L   M   G+  D   Y  LI+A+C +K+ K++ +   E +
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P+  TY  ++ GY  +GN+ +A+   ++M + G   + +TY  LI G C++ KL+
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLE 565

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +A      M+ KG+ P   T   +  E  ++G
Sbjct: 566 DANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 193/359 (53%), Gaps = 7/359 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT---EADRWL 246
           T N V+   C++G +  A +V D+M   G   +  +Y  ++  YC+MGRV    +AD  L
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M++     ++ T  +LI  FC      ++  A ++ EEM  +G KP V T+  L++GL
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKD---ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C +G   +A ++ L  + S N KPNV TY A+I+GYCK++ +  A  L + + +QGL PN
Sbjct: 349 CNEGKLNEA-KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             T+ +L++G+CK G  E A+ L  +M ++G  PN   YN +I G C++G+++E   LL 
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +   R ++AD +TY IL+S   ++ E K+A  L   M+  GL P    Y  L+  +C + 
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++ +    ++    G +    TY  +I GY R G +  A      M + G  P+  TY
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 234/480 (48%), Gaps = 16/480 (3%)

Query: 185 PLITSTLNRVVG--IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           P I S L+  V     C + L+ ++  V    C+   CA++    ++V+AY    +    
Sbjct: 124 PKIRSILDSFVKGETNCSISLIFHSLSV----CSGQFCANSIIADMLVLAYVENSKTVLG 179

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                   D    L   +   L++A   +   G ++  ++   EM+R+   PN+ T   +
Sbjct: 180 LEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYK---EMIRRKISPNLITFNTV 236

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE---KMNRAEMLLERMK 359
           I+GLCK G   KA  + +  ++   + PNV TY  +I GYCK     KM +A+ +L+ M 
Sbjct: 237 INGLCKVGKLNKAGDV-VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           E  + PN+ T+  LI G CK  N   A  + + M  +G  P +  YN++++GLC +G++ 
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  LL +     L+ + ITY  L++ + K+   ++A  LF  + K GL P++  + TL+
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +C+  KM+E+    +  +  G  P   TY  +I G+ R+G +         M   G  
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D +TY  LIS  C++ +  +A +  + M+ KG+ P  +T   L   YC +G+   A+ +
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535

Query: 600 LESLDKK-LW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            + ++K+  W  + T N LI+  C + ++  A    +++L K    +R +   +K    E
Sbjct: 536 RKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 162/315 (51%), Gaps = 4/315 (1%)

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
             +G++ +  +++ EM  N +   + T N ++   C+   +  A +VF+EM ++G+    
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  +V   C  G++ EA   L  ML      +  T   LI  +C K     +++A EL
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL---LEEAREL 395

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            + + ++G  PNV T   L+ G CK G  E+AF L  K++    + PN  TY  +I G+C
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTYNCLIVGFC 454

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           +E KM   + LL  M+ +G+  +T TY  LI   C+    ++A  L+D M  +G  P+  
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN +++G C +G ++ A  L K+  +    A+ +TY +L+  + ++ + + A GL   M
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 464 VKAGLNPDIHAYTTL 478
           ++ GL P+   Y  +
Sbjct: 575 LEKGLIPNRTTYEII 589



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 20/317 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +   L     +  EM + GL     T N +V   C  G +  A+ + DEM +  
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  YC+   + EA      +  +G   +  T   L+  +C     G ++
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK---FGKME 425

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L + M+ KG+ PN  T+  LI G C++G  E+   L L  ++    K +  TY  +
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL-LNEMQCRGVKADTVTYNIL 484

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS +C++++  +A  L++ M ++GL P+  TY  L+ G+C  GN   A +L   M KEG 
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+  YN +I G C+KG++++A  LL +  ++ L  ++ TY I+  E            
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE------------ 592

Query: 459 LFCRMVKAGLNPDIHAY 475
               M++ G  PDI  +
Sbjct: 593 ----MMEKGFLPDIEGH 605



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 5/214 (2%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E+A  +  ++  +  +   ++F     G+ KF      +++    ++  G    A     
Sbjct: 390 EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL-QKVMLEKGFLPNA-STYN 447

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  F   G+++E  +++ EM   G+   T T N ++   CE    + A  + DEM  +
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     +Y +++  YC  G +  A      M   G   +  T  +LI  +C K   G +
Sbjct: 508 GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRK---GKL 564

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           + A  LL EM+ KG  PN  T+ ++ + + +KG+
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 269/559 (48%), Gaps = 40/559 (7%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           +  + +++ GN      V   +V ++ +  +L+EG      + + GL +  +  N ++G 
Sbjct: 12  IVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 71

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             ++G V+ A E++ E+   GV  +  +  +M+ A C+  ++     +LS M ++G   D
Sbjct: 72  LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 131

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-------KG 310
             T   LI A+C +G    +++AFEL++ M  KG KP V+T+  +I+GLCK       KG
Sbjct: 132 VVTYNTLINAYCRQGL---LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 188

Query: 311 WTEKAFR------------LFLKLVRSDNYK---------------PNVHTYTAMISGYC 343
             ++  +            L ++  R+DN                 P++ +++A+I    
Sbjct: 189 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 248

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K   +++A      MK  GL P+   YT LI G C+ G    A  + D M ++GC  ++ 
Sbjct: 249 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 308

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN I++GLCK+  + EA EL  +  +R +  D  T+T L++ + K     +A+ LF  M
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++  L PD+  Y TLI  FC+  +M++  + + + I+  ++P   +Y  +I GY   G +
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A + +  M + G     IT   ++ G C+     +A +F  +M+ KGI P  +T  TL
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              + K+ +   A  ++  ++    +  V   N ++     + R+  A L   K++ +  
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 548

Query: 641 NVDRVSLAALKNACYESNK 659
           N DR +  +L N     N 
Sbjct: 549 NPDRSTYTSLINGHVTQNN 567



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 219/438 (50%), Gaps = 4/438 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   G L+E F ++  M+  GL     T N ++   C+ G    A+ V DEM   G
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D ++Y +++V  CR   + +A+R    M  +G + D  + + LI      G    + 
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG---CLD 254

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +   +M   G  P+   +T+LI G C+ G   +A ++  +++       +V TY  +
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ-GCVLDVVTYNTI 313

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CKE+ ++ A+ L   M E+G+ P+  T+T+LI G+ K GN  +A  L ++M +   
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN +IDG CK   +++  EL      R +  + I+Y IL++ +       +A  
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  MV+ G    I    T++  +CR     ++++F    +  G+ P   TY ++I G++
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ N+  A     +M   G  PD ITY  +++G  +Q ++ EA      MI +G++P   
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 553

Query: 579 TRVTLAYEYCKQGDSATA 596
           T  +L   +  Q +   A
Sbjct: 554 TYTSLINGHVTQNNLKEA 571



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 187/365 (51%), Gaps = 4/365 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+     + + ++G+  + G ++ A + F +M   G+  D   Y +++  +CR G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            ++EA +    ML++G +LD  T   ++   C +     + +A EL  EM  +G  P+ Y
Sbjct: 287 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM---LSEADELFTEMTERGVFPDFY 343

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LI+G  K G   KA  LF  +++  N KP+V TY  +I G+CK  +M +   L   
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + + PN  +Y  LI G+C +G    A+ L D M ++G    I   N I+ G C+ G 
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A E L     + +  D ITY  L++  +K+    +A  L  +M  +GL PD+  Y  
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++  F RQ +M+E+E    + I  G+ P + TYTS+I G++   N+  A +    M Q G
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582

Query: 538 CAPDN 542
             PD+
Sbjct: 583 FVPDD 587



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +   +   F++V +M N+GL     T N ++      G ++ AE +  +M  RG
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           V  D S+Y  ++  +     + EA R    ML RG + D+
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 230/460 (50%), Gaps = 19/460 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F   G +     +V  M + GL     T N +V   C+ G +E A +VFDEM   G
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  +V  YC+ G   EA    + M  +G + D  T T LI   C     G+++
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA---GNLE 307

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+ +M  +G + N  T T LIDG CKKG+ + A  L ++ +R    KP+V  Y A+
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL-LAVRGMRQCRIKPSVVCYNAL 366

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC   +M+ A  LL  M+ +GL P+  TY+++I  +CK  +   A++L   M ++G 
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 426

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+++I  LC++ R+ +A+ L K   +  LQ D+ TYT L+  H K+   ++AL 
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALS 486

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI-C-- 515
           L  +MVKAG+ PD+  Y+ LI    +  +  E+++   +       P    Y +++ C  
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCR 546

Query: 516 ------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                       G+   G ++ A K +Q M       D   Y  LI G C+   + +A  
Sbjct: 547 KAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALS 606

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           F++ M+ +G +P   + ++L     + G    A  +++ L
Sbjct: 607 FHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 238/467 (50%), Gaps = 25/467 (5%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M ++G+     T N ++   C  G  + A  +  +M   G   +  +Y  +V A+ R G 
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V  A+R +  MLD G   +  T   ++   C     G ++ A ++ +EM+R+G  P+  +
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA---GKMEDARKVFDEMMREGLAPDGVS 257

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+ G CK G + +A  +F ++ +     P+V T+T++I   CK   +  A  L+ +M
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC--TPNIYAYNAIIDGLCKKG 416
           +E+GL  N  T+T+LI G CK G  + A  L+ + G   C   P++  YNA+I+G C  G
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDA--LLAVRGMRQCRIKPSVVCYNALINGYCMVG 374

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R+ EA ELL +   + L+ D +TY+ ++S + K  +T  A  L  +M++ G+ PD   Y+
Sbjct: 375 RMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYS 434

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   C +K++ ++   F+  I  GL P + TYTS+I G+ ++GN+  A+    +M + 
Sbjct: 435 SLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA 494

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD +TY  LI+GL K ++  EA Q    +  +   P   T+       C++ +    
Sbjct: 495 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPAN-TKYDALMHCCRKAE---- 549

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
                       +++V  L++  C +  +  A   +  +L ++ N+D
Sbjct: 550 ------------LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLD 584



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 212/422 (50%), Gaps = 7/422 (1%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +T A R+  +ML  G   +  T  +LI A C +G R   K+A  +L +M   G  PNV T
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHR---KEALSILRDMRGAGCGPNVVT 187

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+    + G  + A RL + ++     KPN+ T+ +M++G CK  KM  A  + + M
Sbjct: 188 YNTLVAAFFRAGEVDGAERL-VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +GL P+  +Y +L+ G+CK G    A  +   M ++G  P++  + ++I  +CK G +
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 306

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           + A  L+++  +R LQ +++T+T L+    K+     AL     M +  + P +  Y  L
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  +C   +M E+ +   E    GL P   TY+++I  Y ++ +  SA +  Q+M + G 
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 426

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD ITY +LI  LC++ +L +A   +++MI  G+ P E T  +L   +CK+G+   A+ 
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALS 486

Query: 599 ILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + + + K   +  V T   LI  L    R   A     KL  ++         AL + C 
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCR 546

Query: 656 ES 657
           ++
Sbjct: 547 KA 548



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 169/370 (45%), Gaps = 40/370 (10%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y P+V  Y A++     +  +  A    + M   G+ PN  TY  LI   C  G+ + A 
Sbjct: 112 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 388 DLMDLMGKEGCTPNIYAY-----------------------------------NAIIDGL 412
            ++  M   GC PN+  Y                                   N++++G+
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK G++++A ++  +  +  L  D ++Y  L+  + K   + +AL +F  M + G+ PD+
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +T+LI   C+   ++ +    ++    GL   + T+T++I G+ + G +  A+   + 
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M Q    P  + Y ALI+G C   ++DEA +    M  KG+ P  VT  T+   YCK  D
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 593 SATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
           + +A  + + + +K  +    T ++LIR LC EKR+  A + F  ++      D  +  +
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 650 LKNA-CYESN 658
           L +  C E N
Sbjct: 471 LIDGHCKEGN 480



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 17/326 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +GR+ E   ++ EM   GL     T + ++   C+      A E+  +M  +G
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA +Y  ++   C   R+++A      M+  G   D  T T LI   C +G   +++
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG---NVE 482

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN------- 331
           +A  L ++MV+ G  P+V T++VLI+GL K     +A +L  KL   +    N       
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 332 -------VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                  + +  A++ G+C +  MN A+ + + M ++    + + Y+ LI+GHC+ GN  
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +A      M + G  PN  +  ++I GL + G V EA +++++       AD      L+
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNP 470
             +L +      L +   M K GL P
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLLP 688


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 224/474 (47%), Gaps = 26/474 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC------ELGLVEYAEEVFD 212
           +V S+         + ++  MT  G P      N  +G  C         L++ AE+++ 
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C +G+  +A + +  M+ +G + D +T + +IT  C   
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++AF L +EM   G  P+VYT+T+LID  CK G  E+A  LF ++ RS    P V
Sbjct: 303 ---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTV 358

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MD 391
            TYTA+I  Y K +++ +A  +  RM + G  PN  TY +L+ G CK GN  +A+++   
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 392 LMG---------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           L+G               +    PN+  Y A++DGLCK  +V  A+ELL        + +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            I Y  L+    K  +   A  +F +M K G  P +H YT+LI    +  ++  + K   
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + +     P   TYT+MI G  R G    A+K    M + GC+P+ +TY ALI GL K  
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           K+D +   +  M  KG SP  VT   L    C  G    A ++L  + +  W +
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPK 652



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 220/505 (43%), Gaps = 92/505 (18%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           V++FA     +G+  + F ++ EM   G    TST ++V+   C    VE A  +F EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  D  +Y +++ ++C+ G + +A      M   G      T T LI A+       
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK--- 372

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV------RSDNY- 328
            + QA ++   MV  G +PN  T+  L+DGLCK G   KAF ++ KL+       SD Y 
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 432

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                    PNV TY A++ G CK  K++ A  LL+ M   G  PN   Y +LI G CK 
Sbjct: 433 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 492

Query: 381 GNFERAYD-------------------LMDLMGKEG----------------CTPNIYAY 405
           G  + A +                   L+D M K+G                CTPN+  Y
Sbjct: 493 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
            A+IDGLC+ G  ++A +LL    ++    + +TYT L+    K  +   +L LF +M +
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612

Query: 466 AGLNPDIHAYTTLIAAFCRQK----------KMKES--EKFFQ----------------- 496
            G +P+   Y  LI   C             +MK++   K+ Q                 
Sbjct: 613 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL 672

Query: 497 ----EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALIS 550
               E  + G  P    Y  +I  + + G +  A++  + M ++  +   DN  Y +LI 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
            LC  S+++EA + Y  M  +G  P
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVP 757



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 221/527 (41%), Gaps = 79/527 (14%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA- 248
           T N +V +    G V+    V  EM   G C D  +      A C+ G      RW  A 
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG------RWADAL 95

Query: 249 -MLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
            M++R    LD    T +I+   +  +     +A   L  M      PNV T+  L+ G 
Sbjct: 96  DMIEREDFKLDTVLCTHMISGLMEASY---FDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 307 CKK---GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            KK   GW ++     + ++ ++   PN   + +++  YC E+    A  LL RM   G 
Sbjct: 153 LKKKQLGWCKR----IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 364 LPNTNTYTSL---------------------IYGH--------------------CKVGN 382
            P    Y                        IYG                     C VG 
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F++A+ L+  M ++G  P+   Y+ +I  LC   +V++A+ L ++     +  D  TYTI
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K    +QA  LF  M   G +P +  YT LI A+ + K++ ++   F   + AG
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 503 LFPTKETYTSMICGYLRDGNISSAVK----------------YFQRMNQIGCAPDNITYG 546
             P   TY +++ G  + GNIS A +                YF   ++   AP+ +TYG
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           AL+ GLCK  K+D A +  ++M+  G  P  +    L   +CK G   +A  +   + K 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 607 LWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++ +V+T   LI ++  + R+ +A     ++L      + V+  A+
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 228/545 (41%), Gaps = 44/545 (8%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C   +  + GR  +   M+         L T     ++    E    + A      M   
Sbjct: 80  CFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 136

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               +  +Y+ ++  + +  ++    R ++ M+  G   + +    L+ ++C++      
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK---DY 193

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK------GWTEKAFRLFLKLVRSDNY--K 329
             A++LL  M   G  P    + + I  +C +         + A +++ +++ ++    K
Sbjct: 194 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 253

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            NV  +   +   C   K ++A  L++ M  +G +P+T+TY+ +I   C     E+A+ L
Sbjct: 254 VNVANFARCL---CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 310

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G TP++Y Y  +ID  CK G +++A  L ++          +TYT L+  +LK
Sbjct: 311 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 370

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG------- 502
             +  QA  +F RMV AG  P+   Y  L+   C+   + ++ + + + I          
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430

Query: 503 ---------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                    L P   TY +++ G  +   +  A +    M   GC P++I Y ALI G C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           K  K+D A + +  M   G  P   T  +L     K G    AM +L  + K      V 
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 550

Query: 614 T---LIRKLC----SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           T   +I  LC    SEK + + +L   K  G   NV  V+  AL +   ++ K  L  DL
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEK--GCSPNV--VTYTALIDGLGKAGKIDLSLDL 606

Query: 667 SQRIA 671
             +++
Sbjct: 607 FTQMS 611



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 164/385 (42%), Gaps = 45/385 (11%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L   GN  +A EV   ++ +          F    E  +   P + +    V G+ C+  
Sbjct: 403 LCKAGNISKAFEVYAKLIGTSDSA---DSDFYFPCEDRHTLAPNVVTYGALVDGL-CKAH 458

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V++A E+ D M + G   +   Y  ++  +C+ G++  A      M   G +    T T
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518

Query: 263 LLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            LI    D+ F+ G +  A ++L +M++    PNV T+T +IDGLC+ G +EKA +L L 
Sbjct: 519 SLI----DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL-LS 573

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           L+      PNV TYTA+I G  K  K++ +  L  +M  +G  PN  TY  LI   C  G
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 382 NFERA---------------------------------YDLMDLMGKEGCTPNIYAYNAI 408
             ++A                                   +++ M   G  P    Y  +
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 693

Query: 409 IDGLCKKGRVQEAYELLKKAFQ--RELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ID   K GR++ A EL K+  +    ++ D   Y  L+      ++ ++A  L+  M + 
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKES 491
           G  P++  +  LI      KK  E+
Sbjct: 754 GFVPELSVFVCLIKGLVEVKKWDEA 778



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 145/385 (37%), Gaps = 72/385 (18%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------------------F 319
           G++P+  T+  L+  L   G  +  FR+                                
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L ++  +++K +    T MISG  +    + A   L RM+    +PN  TY +L+ G  K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                    ++++M  EGC PN   +N+++   C +     AY+LL +          + 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 440 YTILLSEHLKQ-----------------------------------------AETKQALG 458
           Y I +     Q                                          +  +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++ G  PD   Y+ +I   C   K++++   FQE    G+ P   TYT +I  + 
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G I  A   F+ M  +GC+P  +TY ALI    K  ++ +A   +  M+  G  P +V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T   L    CK G+ + A  +   L
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKL 419



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLI---TSTLNRVVGI 197
           +++S+G  E  H V   ++  F + G++     + ++MT  G LP +   TS ++R+   
Sbjct: 469 AMLSSG-CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF-- 525

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             + G ++ A +V  +M       +  +Y  M+   CR+G   +A + LS M ++G   +
Sbjct: 526 --KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T T LI      G  G I  + +L  +M RKG  PN  T+ VLI+ LC  G  +KA R
Sbjct: 584 VVTYTALIDGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA-R 639

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L L  ++   +   +  Y   I G+ K    +    +LE M+  G +P    Y  LI   
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCF 697

Query: 378 CKVGNFERAYDL----MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            K G  E A +L    M++        ++YA  ++I  LC   +V+EA+ L  +  +R  
Sbjct: 698 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYA--SLIQALCLASQVEEAFRLYSEMTRRGF 755

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             +   +  L+   ++  +  +AL L   +   G+N
Sbjct: 756 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 791



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 14/298 (4%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + +K+ G  P+  TY +L+      G  +  + +   M + G   + +        LCK+
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           GR  +A +++++    + + D +  T ++S  ++ +   +A+    RM      P++  Y
Sbjct: 89  GRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            TL++ F ++K++   ++     +T G  P    + S++  Y  + + + A K   RM  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 536 IGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            GC P  + Y   I  +C Q K      LD A + Y  M+       +V     A   C 
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 590 QGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFH--KLLGKDQNV 642
            G    A  +++ + +K ++   +T   +I  LC   +V  A L F   K++G   +V
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 201/384 (52%), Gaps = 4/384 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   CE G +E + ++  E+   G   +   Y  ++   C+ G + +A      M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            + +  T T+LI      G +   KQ FE+ E+M   G  PN++T+  +++ LCK G T+
Sbjct: 229 LVANEWTYTVLIHGLFKNGIK---KQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTK 285

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            AF++F ++ R      N+ TY  +I G C+E K N A  ++++MK  G+ PN  TY +L
Sbjct: 286 DAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C V    +A  L   +   G +P++  YN ++ G CKKG    A +++K+  +R +
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +  K+TYTIL+    +    ++A+ L   M + GL PD+H Y+ LI  FC + +M E+ +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F+  +     P +  Y +M+ GY ++G+   A++ F+ M +    P+  +Y  +I  LC
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 554 KQSKLDEACQFYESMIGKGISPCE 577
           K+ K  EA    E MI  GI P +
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPSD 548



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 204/387 (52%), Gaps = 9/387 (2%)

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            +LD  +  ++I   C+ G    I+++F+LL E+   G+ PNV  +T LIDG CKKG  E
Sbjct: 159 VVLDVYSFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA  LF ++ +      N  TYT +I G  K     +   + E+M+E G+ PN +TY  +
Sbjct: 216 KAKDLFFEMGKF-GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           +   CK G  + A+ + D M + G + NI  YN +I GLC++ +  EA E++ +     +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESE 492
             + ITY  L+       +  +AL L CR +K+ GL+P +  Y  L++ FC++     + 
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSL-CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K  +E    G+ P+K TYT +I  + R  N+  A++    M ++G  PD  TY  LI G 
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           C + +++EA + ++SM+ K   P EV   T+   YCK+G S  A+ +   +++K     V
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513

Query: 613 NT---LIRKLCSEKRVGMAALFFHKLL 636
            +   +I  LC E++   A     K++
Sbjct: 514 ASYRYMIEVLCKERKSKEAEGLVEKMI 540



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 4/304 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  K+GF M  +M  +G+     T N V+   C+ G  + A +VFDEM  RGV  +  +Y
Sbjct: 247 GIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTY 306

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR  +  EA+  +  M   G   +  T   LI  FC  G R  + +A  L  +
Sbjct: 307 NTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFC--GVR-KLGKALSLCRD 363

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +  +G  P++ T+ +L+ G CKKG T  A ++ +K +     KP+  TYT +I  + + +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV-VKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M +A  L   M+E GL P+ +TY+ LI+G C  G    A  L   M ++   PN   YN
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G CK+G    A  L ++  ++EL  +  +Y  ++    K+ ++K+A GL  +M+ +
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS 542

Query: 467 GLNP 470
           G+ P
Sbjct: 543 GIGP 546



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 144/282 (51%), Gaps = 5/282 (1%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           +G F   H    C+++   + GR K+ F +  EM   G+     T N ++G  C      
Sbjct: 262 HGVFPNLH-TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A EV D+M + G+  +  +Y  ++  +C + ++ +A      +  RG      T  +L+
Sbjct: 321 EANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILV 380

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
           + FC K   G    A ++++EM  +G KP+  T+T+LID   +    EKA +L   +   
Sbjct: 381 SGFCKK---GDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM-EE 436

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               P+VHTY+ +I G+C + +MN A  L + M E+   PN   Y +++ G+CK G+  R
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYR 496

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           A  L   M ++   PN+ +Y  +I+ LCK+ + +EA  L++K
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 1/122 (0%)

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  +I A+ + + +  S  +F E +  G  P    + +++   +   + +    +F   +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +I    D  ++G +I G C+  +++++      +   G SP  V   TL    CK+G+  
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 595 TA 596
            A
Sbjct: 216 KA 217


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 229/443 (51%), Gaps = 13/443 (2%)

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLD-----RGAILDNATLTL----LITAFCD 270
           C D  SY L VV   R+     A + L  +++        + D  TL+     + ++   
Sbjct: 123 CLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVF 182

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
               G +K+A E +  M   G+KPNV ++  +I G   +G  E A R+ L  +R    +P
Sbjct: 183 DLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI-LDAMRVKGIEP 241

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           + +TY ++ISG CKE ++  A  L ++M E GL+PN  TY +LI G+C  G+ ERA+   
Sbjct: 242 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M K+G  P++  YN ++  L  +GR+ EA +++K+  ++ +  D ITY IL++ + + 
Sbjct: 302 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 361

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              K+A  L   M+  G+ P    YT+LI    R+ +MKE++  F++ +  G+ P    +
Sbjct: 362 GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 421

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            +MI G+  +GN+  A    + M++    PD +T+  L+ G C++ K++EA    + M  
Sbjct: 422 NAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGM 627
           +GI P  ++  TL   Y ++GD   A  + +   S+     + T N LI+ LC  +   +
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 541

Query: 628 AALFFHKLLGKDQNVDRVSLAAL 650
           A     +++ K  + D  +  +L
Sbjct: 542 AEELLKEMVNKGISPDDSTYLSL 564



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 4/382 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A E    M   G   +  SY  ++  Y   G +  A R L AM  +G   D+ T 
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LI+  C +G    +++A  L ++MV  G  PN  T+  LIDG C KG  E+AF    +
Sbjct: 247 GSLISGMCKEG---RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +V+     P+V TY  ++     E +M  A+ +++ M+++G++P+  TY  LI G+ + G
Sbjct: 304 MVKK-GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N +RA+DL + M  +G  P    Y ++I  L ++ R++EA +L +K   + +  D I + 
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++  H      ++A  L   M +  + PD   + TL+   CR+ K++E+     E    
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   +Y ++I GY R G+I  A      M  IG  P  +TY ALI  LCK  + D A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 562 CQFYESMIGKGISPCEVTRVTL 583
            +  + M+ KGISP + T ++L
Sbjct: 543 EELLKEMVNKGISPDDSTYLSL 564



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+LK+    +  M   G      + N ++      G +E A  + D M  +G+  D+ +Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ GR+ EA      M++ G + +  T   LI  +C+KG    +++AF   +E
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG---DLERAFSYRDE 303

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+KG  P+V T+ +L+  L  +G   +A  + +K +R     P+  TY  +I+GY +  
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDM-IKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
              RA  L   M  +G+ P   TYTSLIY   +    + A DL + +  +G +P++  +N
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           A+IDG C  G V+ A+ LLK+  ++ +  D++T+  L+    ++ + ++A  L   M   
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD  +Y TLI+ + R+  +K++     E ++ G  PT  TY ++I    ++     A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            +  + M   G +PD+ TY +LI G+     L E
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 197/372 (52%), Gaps = 7/372 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++  ++  G ++    ++  M   G+   + T   ++   C+ G +E A  +FD+M  
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +A +Y  ++  YC  G +  A  +   M+ +G +   +T  LL+ A   +G  G 
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG- 330

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
             +A ++++EM +KG  P+  T+ +LI+G  + G  ++AF L  +++ S   +P   TYT
Sbjct: 331 --EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEML-SKGIEPTHVTYT 387

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++I    +  +M  A+ L E++ +QG+ P+   + ++I GHC  GN ERA+ L+  M ++
Sbjct: 388 SLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRK 447

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P+   +N ++ G C++G+V+EA  LL +   R ++ D I+Y  L+S + ++ + K A
Sbjct: 448 SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDA 507

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +   M+  G NP +  Y  LI   C+ ++   +E+  +E +  G+ P   TY S+I G
Sbjct: 508 FXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567

Query: 517 YLRDGNISSAVK 528
               GN+ + V+
Sbjct: 568 M---GNVDTLVE 576


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 291/635 (45%), Gaps = 59/635 (9%)

Query: 59  QSLVKTVCSMV-LESYYQ-------QFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANE 110
             +V+ VC ++ L S +        +  LRS  PRL                V A L ++
Sbjct: 131 HPIVREVCRLISLRSNWNPKFEENLRHLLRSLNPRL----------------VCAVLRSQ 174

Query: 111 AGSMVALSFFYWAIGFAKFRH-----FMRLYIVCATSL----------ISNGNFERAHEV 155
               +AL FFYWA    ++RH     +  L I+  T L          ++    ER+ E 
Sbjct: 175 DDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEA 234

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
              ++ S++  G L+    ++  M   G+    S  N  + +  +   +E A    + M 
Sbjct: 235 FSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMK 294

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+  D  SY  ++  YC + R+ +A   ++ M  +G   D  +   ++   C      
Sbjct: 295 VAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDR--- 351

Query: 276 SIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            +++   L+E MV+     P+  T+  LI  L K G  + A  +FL+      +  +   
Sbjct: 352 KVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL-VFLREAEEKGFHIDKVG 410

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+A++  +CK + +++A+ L+  M  +G  P+  TYT++I G C+VG  + A  ++  M 
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMY 470

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K GC PN   Y  +++GLC  G+  EA E++  + +     + ITY+ ++    ++ +  
Sbjct: 471 KHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLS 530

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   M++ G  P+      LI + CR + +  ++K+ +E +  G       +TS+I
Sbjct: 531 EACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVI 590

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ + G++ +A+   + M      PD ITY  L   L K+S+LDEA +    M+GKGI 
Sbjct: 591 YGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGID 650

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLC-------SEKRVG 626
           P  VT   + + +C+ G     M +LE +  +   +TV N +I KLC       +EK +G
Sbjct: 651 PTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLG 710

Query: 627 MAALFFHKLLGKDQN-------VDRVSLAALKNAC 654
                  KL  K  +       +D  +L+A K AC
Sbjct: 711 KVLRTASKLDAKTCHILIESYLIDGNALSAYKVAC 745



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 184/454 (40%), Gaps = 73/454 (16%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  + ++ R+ +   ++ EM   G P    +   V+   C+   VE  + + + M  
Sbjct: 306 NCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ 365

Query: 217 ------------------------------------RGVCADASSYKLMVVAYCRMGRVT 240
                                               +G   D   Y  +V ++C+   + 
Sbjct: 366 NSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNID 425

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +A   +  M  +G   D  T T +I  FC  G    I +A ++L++M + G KPN  T+T
Sbjct: 426 KAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVG---KIDEAKKMLQQMYKHGCKPNTVTYT 482

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           VL++GLC  G + +A R  + +     + PN  TY+A++ G  +E K++ A  L   M E
Sbjct: 483 VLLNGLCHNGKSLEA-REMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIE 541

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G LPN      LI   C+  N   A   ++    +GC  N+  + ++I G C+ G +  
Sbjct: 542 KGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDA 601

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  +L+  +      D ITYT L     K++   +A  L  +M+  G++P    Y  +I 
Sbjct: 602 ALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIH 661

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPT---------------------------------K 507
            FC+  ++ +  K  ++ I    F T                                  
Sbjct: 662 RFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDA 721

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           +T   +I  YL DGN  SA K   +M +    PD
Sbjct: 722 KTCHILIESYLIDGNALSAYKVACQMFRRNLIPD 755



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  +G++ E   M+ +M  +G    T T   ++   C  G    A E+ +      
Sbjct: 449 IIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW 508

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +Y  ++    R G+++EA      M+++G + +   + LLI + C      ++ 
Sbjct: 509 WTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQ---NVV 565

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A + LEE + KG   NV   T +I G C+ G  + A  +   +  S N  P+  TYT +
Sbjct: 566 GAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLS-NKHPDAITYTTL 624

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-G 397
                K+ +++ A  L+ +M  +G+ P   TY ++I+  C+ G   R  D+M L+ K   
Sbjct: 625 FDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWG---RVDDMMKLLEKMIA 681

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P    YN +I+ LC  G  +EA +LL K  +   + D  T  IL+  +L       A 
Sbjct: 682 RQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAY 741

Query: 458 GLFCRMVKAGLNPDI 472
            + C+M +  L PD+
Sbjct: 742 KVACQMFRRNLIPDL 756


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 206/416 (49%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV  +   G L+    ++ EM   GL    +    V+ + C  G V  A  V ++M   G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA  +  ++  +C  G +  A R    M  RG   D  T T LI   C  G    +K
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAG---ELK 409

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L+EMV KG   +V T+TVLIDG CK+G   +AFR+  ++V      PNV TYTA+
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV-GRRVAPNVVTYTAL 468

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
             G CK+  +  A  LL  M  +GL  N  TY SLI G CK GN E+A  +M  M   G 
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++Y Y  +ID LCK G    A+ +L++   + ++    TY +L++        +    
Sbjct: 529 RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKK 588

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++  + P++  Y +L+  +C  K MK + + ++   +  + P + TY  +I G+ 
Sbjct: 589 LLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHC 648

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +  N+  A+ + Q M + G      +Y ALI  L K+ K  EA  F++ M  +G++
Sbjct: 649 KARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLT 704



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 200/379 (52%), Gaps = 4/379 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ +   ++ +MT +G+ L       V+   C  G +  A  +F+EM  RG+ AD  ++
Sbjct: 336 GQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTH 395

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G + EADR L  M+D+G  +D  T T+LI  +C    RG++ +AF +  E
Sbjct: 396 TALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCK---RGNMVEAFRVHNE 452

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +   PNV T+T L DGLCK+G    A  L  ++  +   + NV+TY ++I+G CK  
Sbjct: 453 MVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC-NKGLELNVYTYNSLINGLCKFG 511

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + +A  ++  M+  G   +  TYT+LI   CK G F+RA++++  M  +G  P+I  YN
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYN 571

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++G C  GRV+   +LL+   ++ ++ + +TY  L+ ++      K    ++  M   
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P+ + Y  LI   C+ + MKE+  F QE I  GL  T  +Y+++I    +    S A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691

Query: 527 VKYFQRMNQIGCAPDNITY 545
             +F +M   G   +   Y
Sbjct: 692 RVFFDKMRNEGLTAEPDVY 710



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 216/438 (49%), Gaps = 12/438 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A + FDEM +     D  +Y  MV  YC  G +  A + L  M  +G +  NAT+
Sbjct: 269 GRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKG-LESNATV 324

Query: 262 -TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            T +I   C+KG    +  A  +LE+M   G   +    T +I G C KG    A RLF 
Sbjct: 325 YTSVIALLCNKG---QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFE 381

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++ +       V T+TA+I+G C+  ++  A+ +L+ M ++GL  +  TYT LI G+CK 
Sbjct: 382 EMQKRGLAADRV-THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           GN   A+ + + M      PN+  Y A+ DGLCK+G V+ A ELL +   + L+ +  TY
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTY 500

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++   K    +QA+ +   M  AG   D++ YTTLI   C+  +   +    QE + 
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ P+  TY  ++ G+   G +    K  + M +    P+ +TY +L+   C    +  
Sbjct: 561 KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS 620

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
             + Y+ M  + ++P E T   L   +CK  +   A+   + + +K   L   + + LIR
Sbjct: 621 TTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIR 680

Query: 618 KLCSEKRVGMAALFFHKL 635
            L  +K+   A +FF K+
Sbjct: 681 LLNKKKKFSEARVFFDKM 698



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 4/308 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G + E F +  EM    +     T   +    C+ G V  A E+  EMC +G
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+ G + +A R ++ M   G   D  T T LI   C  G      
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG---EFD 549

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L+EM+ KG KP++ T+ VL++G C  G  E   +L L+ +   N +PNV TY ++
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL-LEWMLEKNVRPNVVTYNSL 608

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC ++ M     + + M  Q + PN NTY  LI GHCK  N + A      M ++G 
Sbjct: 609 MKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                +Y+A+I  L KK +  EA     K     L A+   Y+  +     +   +  + 
Sbjct: 669 RLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTIT 728

Query: 459 LFCRMVKA 466
           L   +V+A
Sbjct: 729 LCDELVEA 736



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 18/200 (9%)

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE--TYTSMICG 516
           L  R+ + GL+P   +   +++       + E+   F+E       P K   ++  ++  
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRE------LPDKNVCSHNILLKA 264

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            L  G +  A ++F  M+     PD +TYG ++ G C + +L+ A +  + M  KG+   
Sbjct: 265 LLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESN 321

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
                ++    C +G  + A+ +LE +      L      T+I   CS+  +  A   F 
Sbjct: 322 ATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFE 381

Query: 634 KLLGKDQNVDRVSLAALKNA 653
           ++  +    DRV+  AL N 
Sbjct: 382 EMQKRGLAADRVTHTALING 401



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 26/207 (12%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y     +L  +G F+RAH ++Q                    EM + G+    +T N ++
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQ--------------------EMLDKGIKPSIATYNVLM 574

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C  G VE  +++ + M  + V  +  +Y  ++  YC    +         M  +   
Sbjct: 575 NGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA 634

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            +  T  +LI   C      ++K+A    +EM+ KG +    +++ LI  L KK    +A
Sbjct: 635 PNENTYNILIKGHCKA---RNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691

Query: 316 FRLFLKLVRSDNY--KPNVHTYTAMIS 340
            R+F   +R++    +P+V+++   IS
Sbjct: 692 -RVFFDKMRNEGLTAEPDVYSFYMDIS 717


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 224/474 (47%), Gaps = 26/474 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC------ELGLVEYAEEVFD 212
           +V S+         + ++  MT  G P      N  +G  C         L++ AE+++ 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C +G+  +A + +  M+ +G + D +T + +IT  C   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++AF L +EM   G  P+VYT+T+LID  CK G  E+A  LF ++ RS    P V
Sbjct: 238 ---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTV 293

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MD 391
            TYTA+I  Y K +++ +A  +  RM + G  PN  TY +L+ G CK GN  +A+++   
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 392 LMG---------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           L+G               +    PN+  Y A++DGLCK  +V  A+ELL        + +
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            I Y  L+    K  +   A  +F +M K G  P +H YT+LI    +  ++  + K   
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + +     P   TYT+MI G  R G    A+K    M + GC+P+ +TY ALI GL K  
Sbjct: 474 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           K+D +   +  M  KG SP  VT   L    C  G    A ++L  + +  W +
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPK 587



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 220/505 (43%), Gaps = 92/505 (18%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           V++FA     +G+  + F ++ EM   G    TST ++V+   C    VE A  +F EM 
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  D  +Y +++ ++C+ G + +A      M   G      T T LI A+       
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK--- 307

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV------RSDNY- 328
            + QA ++   MV  G +PN  T+  L+DGLCK G   KAF ++ KL+       SD Y 
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 367

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                    PNV TY A++ G CK  K++ A  LL+ M   G  PN   Y +LI G CK 
Sbjct: 368 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 427

Query: 381 GNFERAYD-------------------LMDLMGKEG----------------CTPNIYAY 405
           G  + A +                   L+D M K+G                CTPN+  Y
Sbjct: 428 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 487

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
            A+IDGLC+ G  ++A +LL    ++    + +TYT L+    K  +   +L LF +M +
Sbjct: 488 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 547

Query: 466 AGLNPDIHAYTTLIAAFCRQK----------KMKES--EKFFQ----------------- 496
            G +P+   Y  LI   C             +MK++   K+ Q                 
Sbjct: 548 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL 607

Query: 497 ----EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALIS 550
               E  + G  P    Y  +I  + + G +  A++  + M ++  +   DN  Y +LI 
Sbjct: 608 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 667

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
            LC  S+++EA + Y  M  +G  P
Sbjct: 668 ALCLASQVEEAFRLYSEMTRRGFVP 692



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 211/501 (42%), Gaps = 75/501 (14%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKG 272
           M   G C D  +      A C+ GR  +A      M++R    LD    T +I+   +  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA----LDMIEREDFKLDTVLCTHMISGLMEAS 56

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK---GWTEKAFRLFLKLVRSDNYK 329
           +     +A   L  M      PNV T+  L+ G  KK   GW ++     + ++ ++   
Sbjct: 57  Y---FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR----IINMMMTEGCN 109

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI--------------- 374
           PN   + +++  YC E+    A  LL RM   G  P    Y   I               
Sbjct: 110 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 169

Query: 375 ------YGH--------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
                 YG                     C VG F++A+ L+  M ++G  P+   Y+ +
Sbjct: 170 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 229

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I  LC   +V++A+ L ++     +  D  TYTIL+    K    +QA  LF  M   G 
Sbjct: 230 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 289

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +P +  YT LI A+ + K++ ++   F   + AG  P   TY +++ G  + GNIS A +
Sbjct: 290 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 349

Query: 529 ----------------YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
                           YF   ++   AP+ +TYGAL+ GLCK  K+D A +  ++M+  G
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 409

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAA 629
             P  +    L   +CK G   +A  +   + K  ++ +V+T   LI ++  + R+ +A 
Sbjct: 410 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 469

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
               ++L      + V+  A+
Sbjct: 470 KVLSQMLKDSCTPNVVTYTAM 490



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/559 (22%), Positives = 232/559 (41%), Gaps = 44/559 (7%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S   F      + C   +  + GR  +   M+         L T     ++    E   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASY 57

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            + A      M       +  +Y+ ++  + +  ++    R ++ M+  G   + +    
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK------GWTEKAFR 317
           L+ ++C++        A++LL  M   G  P    + + I  +C +         + A +
Sbjct: 118 LVHSYCNEK---DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 174

Query: 318 LFLKLVRSDNY--KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           ++ +++ ++    K NV  +   +   C   K ++A  L++ M  +G +P+T+TY+ +I 
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCL---CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
             C     E+A+ L   M   G TP++Y Y  +ID  CK G +++A  L ++        
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
             +TYT L+  +LK  +  QA  +F RMV AG  P+   Y  L+   C+   + ++ + +
Sbjct: 292 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 351

Query: 496 QEAITAG----------------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            + I                   L P   TY +++ G  +   +  A +    M   GC 
Sbjct: 352 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 411

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P++I Y ALI G CK  K+D A + +  M   G  P   T  +L     K G    AM +
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471

Query: 600 LESLDKKLWIRTVNT---LIRKLC----SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
           L  + K      V T   +I  LC    SEK + + +L   K  G   NV  V+  AL +
Sbjct: 472 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK--GCSPNV--VTYTALID 527

Query: 653 ACYESNKYALFSDLSQRIA 671
              ++ K  L  DL  +++
Sbjct: 528 GLGKAGKIDLSLDLFTQMS 546



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 148/338 (43%), Gaps = 41/338 (12%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V++A E+ D M + G   +   Y  ++  +C+ G++  A      M
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440

Query: 250 LDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
              G +    T T LI    D+ F+ G +  A ++L +M++    PNV T+T +IDGLC+
Sbjct: 441 TKCGYLPSVHTYTSLI----DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G +EKA +L L L+      PNV TYTA+I G  K  K++ +  L  +M  +G  PN  
Sbjct: 497 IGESEKALKL-LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555

Query: 369 TYTSLIYGHCKVGNFERA---------------------------------YDLMDLMGK 395
           TY  LI   C  G  ++A                                   +++ M  
Sbjct: 556 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES 615

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ--RELQADKITYTILLSEHLKQAET 453
            G  P    Y  +ID   K GR++ A EL K+  +    ++ D   Y  L+      ++ 
Sbjct: 616 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQV 675

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           ++A  L+  M + G  P++  +  LI      KK  E+
Sbjct: 676 EEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLI---TSTLNRVVGI 197
           +++S+G  E  H V   ++  F + G++     + ++MT  G LP +   TS ++R+   
Sbjct: 404 AMLSSG-CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF-- 460

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             + G ++ A +V  +M       +  +Y  M+   CR+G   +A + LS M ++G   +
Sbjct: 461 --KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 518

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T T LI      G  G I  + +L  +M RKG  PN  T+ VLI+ LC  G  +KA R
Sbjct: 519 VVTYTALIDGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA-R 574

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L L  ++   +   +  Y   I G+ K    +    +LE M+  G +P    Y  LI   
Sbjct: 575 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCF 632

Query: 378 CKVGNFERAYDL----MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            K G  E A +L    M++        ++YA  ++I  LC   +V+EA+ L  +  +R  
Sbjct: 633 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYA--SLIQALCLASQVEEAFRLYSEMTRRGF 690

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             +   +  L+   ++  +  +AL L   +   G+N
Sbjct: 691 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 12/495 (2%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLI---SNGNFER-AHEVMQCMVSSFAEIGRLKE 171
           AL+FF W      FRH    +      L    +   +ER    ++ C  S  AE  R+  
Sbjct: 73  ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNC--SDTAEDMRVSA 130

Query: 172 GFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
                I  T +  L L     N  +       + EY   V+ ++   G+  D  +Y  M+
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            +YC+ G +T A R    +L+ G   +  T   L+  +C     G +++A  L   M   
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRT---GELRKACWLFLMMPLM 247

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G + N Y++T+LI GLC+     +A  LFL +++ D   PNV  +T +ISG CK  ++  
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFL-MMKRDGCSPNVRAFTFLISGLCKSGRVGD 306

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A +L + M + G++P+  TY ++I G+ K+G    A  + +LM K GC P+ + YN +I 
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC + + +EA ELL  A +       +T+T L++ +    +   AL +  +M+ +    
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  +  LI +  ++ ++KE+++   E    GL P   TYTS+I GY + G +  A++  
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M + GC P+  TY +L+ GL K  KL +A      M   GI P  +T  TL    C +
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 591 GDSATAMIILESLDK 605
            D   A  + E +++
Sbjct: 546 HDFDNAFRLFEMMEQ 560



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 239/567 (42%), Gaps = 94/567 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  ++++GR+ +   +   M  NG      T N ++   C+    E AEE+ +     G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC   +  +A R  + M+     LD      LI +   K     +K
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD---RLK 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A ELL E+   G  PNV T+T +IDG CK G                     WT     
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 504

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   PNV TYT ++ G C E   + A  L E M++ GL
Sbjct: 505 YGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 364 LPNTNTY--------------------------------TSLIYGHCKVGNFERAYDLMD 391
            P+ + Y                                T+LI G  K GN + A  L++
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGCTP+ Y Y+ ++  LCK+ R+ EA  +L +   R ++     YTIL+ E L++ 
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  ++  M  +G  P    YT  I ++C++ +++++E    +    G+ P   TY 
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 512 SMI--CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----------------SGLC 553
            +I  CG++  G I  A    +RM    C P+  TY  L+                SG+ 
Sbjct: 744 ILIDGCGHM--GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI--RT 611
              +LD   Q  E M+  G++P   T  +L   +CK G    A ++L+ +  K       
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGK 638
           + TL+ K C + +    AL F  ++ +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSE 888



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 230/519 (44%), Gaps = 26/519 (5%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   +++S  +  RLKE   ++ E++ NGL     T   ++   C+ G V+ A EV   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   +A +Y  ++    +  ++ +A   L+ M   G I +  T T L+   CD+  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE-- 545

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                 AF L E M + G KP+ + + VL D LCK G  E+A+     +VR       V+
Sbjct: 546 -HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            YT +I G+ K    + A  L+ERM ++G  P++ TY+ L++  CK      A  ++D M
Sbjct: 602 -YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G    I+AY  +ID + ++G+   A  +  +      +    TYT+ ++ + K+   
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  L  +M + G+ PD+  Y  LI        +  +    +  + A   P   TY  +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 514 I-------CGYLRDGNISS---------AVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           +         Y+R  + S            +  +RM + G  P   TY +LI+G CK  +
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMI-ILESLDKKLWIRTVNT 614
           L+EAC   + M GKG+SP E     L    C  K  + A + + I+     +  + +   
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           L+  LC+E         F  LL    N D V+   L + 
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 29/428 (6%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           QC    F    RL   F M   M  NGL         +    C+ G    AEE +  +  
Sbjct: 542 QCDEHDFDNAFRL---FEM---MEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVR 592

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV      Y  ++  + + G    A   +  M+D G   D+ T ++L+ A C +     
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK---R 649

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  +L++M  +G K  ++ +T+LID + ++G  + A R++ ++  S  +KP+  TYT
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYT 708

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+ YCKE ++  AE L+ +M+ +G+ P+  TY  LI G   +G  +RA+  +  M   
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 397 GCTPNIYAYNAIIDGLCKKG----------------RVQEAYELLKKAFQRELQADKITY 440
            C PN + Y  ++  L K                   +   ++LL++  +  L     TY
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + L++   K    ++A  L   M   GL+P+   YT LI   C  K  +++  F      
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G  P  E+Y  ++ G   +G+       F  + ++G   D + +  L  GL K   +D 
Sbjct: 889 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDI 948

Query: 561 ACQFYESM 568
             Q    M
Sbjct: 949 CFQMLSIM 956



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 147/269 (54%), Gaps = 8/269 (2%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           ++ + GLLP+T TY ++I  +CK G+   A+    L+ + G  P  +  NA++ G C+ G
Sbjct: 173 QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTG 232

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            +++A  L         Q ++ +YTIL+    +    ++AL LF  M + G +P++ A+T
Sbjct: 233 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFT 292

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI+  C+  ++ ++   F      G+ P+  TY +MI GY + G ++ A+K  + M + 
Sbjct: 293 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN 352

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSA 594
           GC PD+ TY  LI GLC Q K +EA +   + + +G +P  VT   L   YC  ++ D A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411

Query: 595 TAM--IILES---LDKKLWIRTVNTLIRK 618
             M   ++ S   LD +++ + +N+LI+K
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKK 440



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 55/327 (16%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E   ++ +M+  G+         ++      G  ++A+ +++EM + G    A++Y 
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC+ GR+ +A+  +  M   G   D  T  +LI      G  G I +AF  L+ M
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRM 765

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG------------WT----EKAFRLFLKLVRSDNYKPN 331
           V    +PN +T+ +L+  L K              W     +  ++L  ++V+     P 
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH-GLNPT 824

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI----------------- 374
           V TY+++I+G+CK  ++  A +LL+ M  +GL PN + YT LI                 
Sbjct: 825 VTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVS 884

Query: 375 ------------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
                              G C  G+FE+   L   + + G   +  A+  + DGL K G
Sbjct: 885 IMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944

Query: 417 RVQEAYELLKKAFQRELQADKITYTIL 443
            V   +++L    +R       TY ++
Sbjct: 945 YVDICFQMLSIMEKRYCCISSQTYALV 971



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 7/224 (3%)

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN  +  L +    +    +  +  Q  L  D +TY  ++  + K+ +   A   F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + GL P+      L+  +CR  +++++   F      G    + +YT +I G      + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+  F  M + GC+P+   +  LISGLCK  ++ +A   +++M   G+ P  +T   + 
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 585 YEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEK 623
             Y K G    A+ I E ++K       W  T NTLI  LC +K
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDW--TYNTLIYGLCDQK 372



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 32/177 (18%)

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ ++V+ GL PD   Y T+I ++C++  +  + + F+  +  GL P   T  +++ GY 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F  M  +GC  +  +Y  LI GLC+   + EA   +  M   G SP   
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPN-- 287

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                                         +R    LI  LC   RVG A L F  +
Sbjct: 288 ------------------------------VRAFTFLISGLCKSGRVGDARLLFDAM 314


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 221/460 (48%), Gaps = 7/460 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G    AE +F EM  +G+CA+  +Y +++ ++CR G +  A  +L  M            
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LI  +C  G   + K  F+   EM+ KG  P V T+T LI G C +G   KAF+++ +
Sbjct: 266 NSLINGYCKLGNASAAKYYFD---EMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNE 322

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +  +    PN +T+TA+ISG C+   M  A  L   MKE+ ++P+  TY  +I GHC+ G
Sbjct: 323 MT-AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSG 381

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N   A+ L+D M  +G  P+ Y Y  +I GLC  GRV EA E +    +   + + + Y+
Sbjct: 382 NISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYS 441

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  + K+   K A+     MV+ G+  D+  Y  LI    R+   +      +E    
Sbjct: 442 ALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH 501

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P    YT+MI  + + GN+  A   +  M   GC P+ +TY ALI+GLCK   +D+A
Sbjct: 502 GLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA 561

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKL 619
               +  +   ++P  +T         + G+   A+ +  ++ K     TV  N LIR  
Sbjct: 562 ELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGF 621

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAA-LKNACYESN 658
           C   ++  A    H +   D   D ++ +  +   C  SN
Sbjct: 622 CRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSN 661



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 243/547 (44%), Gaps = 48/547 (8%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV SL        A    +W + F + +  + +Y V    L  +     A E+  C++  
Sbjct: 137 VVRSLCELKDFNKAKEMIHW-MEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQK 195

Query: 163 FAE------IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             E       G+  E   +  EM   GL     T + ++   C  G ++ A    D+M  
Sbjct: 196 GLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
             +      Y  ++  YC++G  + A  +   M+D+G      T T LI+ +C++   G 
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNE---GE 312

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
             +AF++  EM  KG  PN YT T +I GLC+     +A RLF ++ +     P+  TY 
Sbjct: 313 WHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM-KERKIMPSEVTYN 371

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            MI G+C+   ++ A  LL+ M  +G +P+T TY  LI G C VG    A + +D + K+
Sbjct: 372 VMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKD 431

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA----------------------------------- 421
               N   Y+A++ G CK+GR ++A                                   
Sbjct: 432 HHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRAL 491

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           + LLK+     L+ D + YT ++  H K    K+A GL+  MV  G  P++  YT LI  
Sbjct: 492 FGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALING 551

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+   M ++E   +E + + + P   TY   +    R GN+  AV+    M + G    
Sbjct: 552 LCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLAT 610

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            ++Y  LI G C+  K++EA +    M    I P  +T  T+ YE CK+ +   A+ +  
Sbjct: 611 TVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWH 670

Query: 602 S-LDKKL 607
           + LDK L
Sbjct: 671 TMLDKGL 677



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 213/456 (46%), Gaps = 40/456 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + ++G          EM + GL     T   ++   C  G    A +V++EM A+G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   CR   + EA R    M +R  +    T  ++I   C  G   +I 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSG---NIS 384

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF LL+EMV KG+ P+ YT+  LI GLC  G   +A + F+  +  D++K N   Y+A+
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA-KEFVDDLHKDHHKLNNMCYSAL 443

Query: 339 ISGYCKEEKMNRAEM-----------------------------------LLERMKEQGL 363
           + GYCKE +   A                                     LL+ M   GL
Sbjct: 444 VHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGL 503

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   YT++I  H K GN + A+ L D+M  EGC PN+  Y A+I+GLCK G + +A  
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAEL 563

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L K+    ++  + ITY   L    +    ++A+ L   M+K  L   + +Y  LI  FC
Sbjct: 564 LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTV-SYNILIRGFC 622

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R  K++E+ K         + P   TY+++I    +  N+  A+K +  M   G  PD +
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            Y  L+ G C   +L++A +  + MI +G+    VT
Sbjct: 683 AYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 208/472 (44%), Gaps = 32/472 (6%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FD++ +  V  D   Y  +V + C +    +A   +  M      L      +LI   C
Sbjct: 118 LFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLC 177

Query: 270 ----------------DKG-------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                            KG       + G   +A  L +EM  KG   N  T+++LID  
Sbjct: 178 KSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSF 237

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C++G  + A     K+ ++ + +  V+ Y ++I+GYCK    + A+   + M ++GL P 
Sbjct: 238 CRRGEMDNAIGFLDKMTKA-SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPT 296

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TYTSLI G+C  G + +A+ + + M  +G +PN Y + AII GLC+   + EA  L  
Sbjct: 297 VVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFG 356

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  +R++   ++TY +++  H +     +A  L   MV  G  PD + Y  LI+  C   
Sbjct: 357 EMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVG 416

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ E+++F  +            Y++++ GY ++G    AV   + M + G A D + Y 
Sbjct: 417 RVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYA 476

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LI G  ++          + M   G+ P  V    +   + K G+   A  + + +  +
Sbjct: 477 ILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDE 536

Query: 607 LWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
             +  V T   LI  LC    +  A     +LL K+  V  V+   +   C+
Sbjct: 537 GCLPNVVTYTALINGLCKAGLMDKA-----ELLSKETLVSDVTPNHITYGCF 583



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 37/366 (10%)

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +L++  N  P V T +A+++G  +  + N   +L + +    + P+   Y++++   C++
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE----------------- 423
            +F +A +++  M    C  +I  YN +I GLCK  R+ EA E                 
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 424 ---------LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
                    L K+  ++ L A+ ITY+IL+    ++ E   A+G   +M KA +   ++ 
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI  +C+      ++ +F E I  GL PT  TYTS+I GY  +G    A K +  M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G +P+  T+ A+ISGLC+ + + EA + +  M  + I P EVT   +   +C+ G+ +
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            A  +L+ +  K ++    T   LI  LCS  RV  A  F    L KD +        L 
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD-LHKDHH-------KLN 436

Query: 652 NACYES 657
           N CY +
Sbjct: 437 NMCYSA 442


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 226/469 (48%), Gaps = 6/469 (1%)

Query: 149 FERAHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           F   H V  +  +++    +  +    S++ +M   G+    ST N ++   C  G ++ 
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+F+EM  RG   +  SY  ++   C+ G  + A      M   G   D  T   +I 
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           + C       +  A E L EM+ +G  PNV+T+  ++ G C  G   +A RLF ++V  D
Sbjct: 237 SLCKDRL---VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  T T ++ G CKE  ++ A ++ E M E+G+ PN +TY +L+ G+C       A
Sbjct: 294 -VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             + ++M ++GC P +++YN +I+G CK  R+ EA  LL + + + L  D +TY+ L+  
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    K+AL +F  M   GL P++  Y+ L+  FC+   + E+ K  +      L P 
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              +T +I G    G +  A + F ++   G  P   TY  +I GL K+   DEA   + 
Sbjct: 473 IVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFR 532

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
            M   G  P   +   +   + +  DS+TA+ +++ +  K +   ++T 
Sbjct: 533 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTF 581



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 154/321 (47%), Gaps = 1/321 (0%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L  +M   G   NVY+  VLI+ LC+    + A  +  K+ +     P   T+ A+I+G 
Sbjct: 110 LCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKL-GIHPTASTFNALINGL 168

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C E K+  A  L   M  +G  PN  +Y ++I G CK GN   A D+   M + GC P++
Sbjct: 169 CNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN IID LCK   V +A E L +   R +  +  TY  ++       +  +A  LF  
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           MV   + PD    T L+   C++  + E+   F+     G+ P   TY +++ GY     
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ A K F+ M + GCAP   +Y  LI+G CK  ++DEA      M  K ++P  VT  T
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L    C+ G    A+ I + +
Sbjct: 409 LMQGLCQFGRPKEALNIFKEM 429



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 4/341 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A   F ++VR  N +P+V  +   +  + K+++ +    L  +M   G+  N  +   
Sbjct: 70  DDALASFYRMVRM-NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C++ + + A  ++  M K G  P    +NA+I+GLC +G+++EA EL  +  +R 
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + I+Y  +++   K   T  A+ +F +M + G  PD+  Y T+I + C+ + + ++ 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +F  E +  G+ P   TY  M+ G+   G ++ A + F+ M      PD +T   L+ GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           CK+  + EA   +E+M  KG+ P   T   L   YC Q     A  + E + ++     +
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            + N LI   C  +R+  A     ++  K  N D V+ + L
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 159/323 (49%), Gaps = 4/323 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CMV  F  +G+L E   +  EM    +   T TL  +V   C+ G+V  A  VF+ M  
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV  + S+Y  ++  YC    + EA +    M+ +G      +  +LI  FC K  R  
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC-KSRR-- 383

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  LL EM  K   P+  T++ L+ GLC+ G  ++A  +F ++  S    PN+ TY+
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC-SYGLLPNLVTYS 442

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+CK   ++ A  LL+ M+E+ L PN   +T LI G    G  E A +L   +  +
Sbjct: 443 ILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD 502

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P I  Y  +I GL K+G   EAY+L +K        +  +Y +++   L+  ++  A
Sbjct: 503 GIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTA 562

Query: 457 LGLFCRMVKAGLNPDIHAYTTLI 479
           + L   MV    + ++  +  L+
Sbjct: 563 IRLIDEMVGKRFSANLSTFQMLL 585



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 33/284 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G + E   +   MT  G+    ST N ++   C   L+  A++VF+ M  +G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-------- 270
                 SY +++  +C+  R+ EA   L+ M  +    D  T + L+   C         
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423

Query: 271 ----------------------KGF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                  GF   G + +A +LL+ M  K  +PN+  HT+LI+G+
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
              G  E A  LF KL  +D  +P + TYT MI G  KE   + A  L  +M++ G LPN
Sbjct: 484 FIAGKLEVAKELFSKLF-ADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           + +Y  +I G  +  +   A  L+D M  +  + N+  +  ++D
Sbjct: 543 SCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 250/502 (49%), Gaps = 27/502 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG-----------FSMVIE----MT 180
           Y V  + L  + + ++A+EV+  M+ +  +      G           + M IE    M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 181 NNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            NG LP +      ++G+ C    VE A+ +  +M  +G+  +A +Y   +  Y + G +
Sbjct: 514 ANGVLPDLFCYNCLIIGL-CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             A+R+   ML  G + +N   T+LI   CD    G+  +A    + M+ KG  P++  +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCD---VGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           + +I  L K G T++A  +FLK +++    P+V  Y ++ISG+CKE  + +A  L + M 
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKT-GVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 360 EQGLLPNTNTYTSLI--YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
             G+ PN   Y +LI  YG+CK GN   A+ L D M  +G +P+ Y Y  +IDG  K+G 
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +++A  L  +A Q+ + +    +  L+    K  +  +A  LF  MV   L P+I  YT 
Sbjct: 749 LEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI A+ + + M+E+E+ F +  T  + P   TYTS++  Y + GN    +  F+ M   G
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            A D I YG + S  CK+ K  EA +     + +GI   +     L +  CK+   +T +
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927

Query: 598 IILESLDKK---LWIRTVNTLI 616
            +L  + K+   L  +T NTL+
Sbjct: 928 ELLSEMGKEELSLSSKTCNTLL 949



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 234/499 (46%), Gaps = 8/499 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F +  R KE   +   M ++GL     T   ++    + G +E A  + DEM  RG
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+    + G + +A    + ML  G   D  T  LLI  +        + 
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS---HDMA 433

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL EM  +   P+ +T++VLI GLC     +KA  +  +++R +  KPNV  Y  +
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NGVKPNVFMYGTL 492

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y +E +   A  LL+ M   G+LP+   Y  LI G C+    E A  L+  MG++G 
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y A I+   K G +Q A    K      +  + + YTIL+  H     T +AL 
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M++ GL PDI AY+ +I +  +  K KE+   F + +  G+ P    Y S+I G+ 
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC 672

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALIS--GLCKQSKLDEACQFYESMIGKGISPC 576
           ++G+I  A + +  M   G  P+ + Y  LI+  G CK   L EA + ++ MI KGISP 
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHK 634
                 L     K+G+   A+ +     +K    +   N+LI   C   +V  A   F  
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDD 792

Query: 635 LLGKDQNVDRVSLAALKNA 653
           ++ K    + V+   L +A
Sbjct: 793 MVDKKLTPNIVTYTILIDA 811



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 231/485 (47%), Gaps = 42/485 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  ++G + +G  ++ EM     P +  T N  +G  C+ G V+ A EV   M  +G
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEKECKPNLF-TYNAFIGGLCQTGAVDEALEVKKLMMEKG 306

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y L+V  +C+  R  EA     +M   G   +  T T LI  F  +G   +I+
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG---NIE 363

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  + +EM+ +G K NV T+  +I G+ K G   KA  LF +++ +   +P+  TY  +
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA-GIEPDTWTYNLL 422

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K   M +A  LL  MK + L P+  TY+ LI G C   + ++A +++D M + G 
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN++ Y  +I    ++ R + A ELLK      +  D   Y  L+    +  + ++A  
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ P+ H Y   I  + +  +++ +E++F++ +++G+ P    YT +I G+ 
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602

Query: 519 RDGNISSAVKYFQ-----------------------------------RMNQIGCAPDNI 543
             GN   A+  F+                                   +  + G  PD  
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA--YEYCKQGDSATAMIILE 601
            Y +LISG CK+  +++A Q Y+ M+  GI+P  V   TL   Y YCK G+   A  + +
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722

Query: 602 SLDKK 606
            +  K
Sbjct: 723 EMISK 727



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/629 (24%), Positives = 265/629 (42%), Gaps = 76/629 (12%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ-------------------- 157
           +FF+W+        ++  Y + A  L ++G   +A  +++                    
Sbjct: 105 NFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCY 164

Query: 158 ------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
                         +  F  +G L E  S+ I   + G        N ++    +  ++ 
Sbjct: 165 REFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA----------------- 248
              +V+  M    +  D  +Y  ++ A+C++G V +    LS                  
Sbjct: 225 LFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIG 284

Query: 249 -----------------MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
                            M+++G   D  T TLL+  FC    +   K+A  + E M   G
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK---QKRSKEAKLIFESMPSSG 341

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PN +T+T LIDG  K+G  E+A R+  +++ +   K NV TY AMI G  K  +M +A
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMI-TRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L   M   G+ P+T TY  LI G+ K  +  +A +L+  M     TP+ + Y+ +I G
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LC    +Q+A E+L +  +  ++ +   Y  L+  +++++  + A+ L   M+  G+ PD
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y  LI   CR KK++E++    +    G+ P   TY + I  Y + G I  A +YF+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M   G  P+N+ Y  LI G C      EA   ++ M+ KG+ P       + +   K G
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640

Query: 592 DSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
            +  AM +     K   +  V   N+LI   C E  +  A+  + ++L    N + V   
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYN 700

Query: 649 ALKNA---CYESNKYALFSDLSQRIAEGI 674
            L N    C   N    F    + I++GI
Sbjct: 701 TLINDYGYCKSGNLTEAFKLFDEMISKGI 729



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 7/358 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S ++ G+ KE   + ++    G+       N ++   C+ G +E A +++DEM   G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 219 VCADASSYKLMV--VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +  +   Y  ++    YC+ G +TEA +    M+ +G   D     +LI   C K   G+
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG-CGK--EGN 748

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +++A  L  E  +K    ++     LID  CK G   +A  LF  +V      PN+ TYT
Sbjct: 749 LEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMV-DKKLTPNIVTYT 806

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I  Y K E M  AE L   M+ + ++PNT TYTSL+  + ++GN  +   L   M   
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G   +  AY  +    CK+G+  EA +LL K+    ++ +   +  L+    K+ +    
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 926

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           L L   M K  L+       TL+  F +     E+ K        G  PT  + T  I
Sbjct: 927 LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 984


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 266/571 (46%), Gaps = 40/571 (7%)

Query: 47  AFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVAS 106
            FSS S  P     L+  +   + +S  +     S  PRL   +   +  H   +  +  
Sbjct: 35  PFSSWSHFPYKDHDLLCEISEAINDSETKHEKGYSENPRLKRILPSLTPRHVSKLITLNP 94

Query: 107 LANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI 166
           L     S+  LSFF        FRH +  Y      L  +    +AH ++  +VS     
Sbjct: 95  LCLPPSSL--LSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVS----- 147

Query: 167 GRLKEGFSMVIEMTNNGLPLITS---TLNRVVGIACELGLV------EYAEEVFDE---M 214
              ++G       TN+   L +S   T+ R       +GLV       Y +  F      
Sbjct: 148 ---RKG-------TNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQ 197

Query: 215 CARGVCADASSYKL-----MVVAYCRMGRVTEADRW--LSAMLDRGAILDNATLTLLITA 267
           C R V  +     +     ++    R+  V     W     +LD G         +L+  
Sbjct: 198 CFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHG 257

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FC  G  G+ +  F+   E+ ++G +P V +   LI G CK G  E+ FRL   ++ S+ 
Sbjct: 258 FCKAGDVGNARLVFD---EIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL-KGVMESEG 313

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V T++A+I+G CKE +++   +L + M  +GL+PN  T+T+LI G CK G  + A 
Sbjct: 314 VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLAL 373

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
               +M  +G  P++  YNA+I+GLCK G ++EA  L+ +     L+ DKIT+T L+   
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  + + AL +  RMV+ G+  D  A+T LI+  CR+ ++ ++ +   + ++AG  P  
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TYT +I  + + G++    K  + M   G  P  +TY AL++GLCKQ ++  A    ++
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           M+  G++P ++T   L   + K G S    I
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGSSVDVDI 584



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 200/380 (52%), Gaps = 13/380 (3%)

Query: 264 LITAFCDKGFRGSIKQAFELLEE----MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           LI+A+ D GF     Q F L+ +    +  +G + N+    V +    +    E+++ L+
Sbjct: 182 LISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCE-NLLRRVVRL----RPVEIERSWALY 236

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L+++ S  Y P ++ +  ++ G+CK   +  A ++ + + ++GL P   ++ +LI G CK
Sbjct: 237 LEVLDS-GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCK 295

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G+ E  + L  +M  EG  P+++ ++A+I+GLCK+GR+ E   L  +   R L  + +T
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVT 355

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +T L+    K  +   AL  F  M+  G+ PD+  Y  LI   C+   +KE+ +   E  
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            +GL P K T+T++I G  +DG++ SA++  +RM + G   D++ + ALISGLC++ ++ 
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
           +A +    M+  G  P + T   +   +CK+GD      +L+ +        + T N L+
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535

Query: 617 RKLCSEKRVGMAALFFHKLL 636
             LC + ++  A +    +L
Sbjct: 536 NGLCKQGQMKNAKMLLDAML 555



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 191/389 (49%), Gaps = 7/389 (1%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           ++  +++ +E+ ++G P      N ++   C+ G V  A  VFDE+  RG+     S+  
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C+ G V E  R    M   G   D  T + LI   C +   G + +   L +EM 
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKE---GRLDEGSLLFDEMC 345

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            +G  PN  T T LIDG CK G  + A + F +++ +   +P++ TY A+I+G CK   +
Sbjct: 346 GRGLVPNGVTFTTLIDGQCKGGKVDLALKNF-QMMLAQGVRPDLVTYNALINGLCKVGDL 404

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L+  M   GL P+  T+T+LI G CK G+ E A ++   M +EG   +  A+ A+
Sbjct: 405 KEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTAL 464

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GLC++GRV +A  +L        + D  TYT+++    K+ + K    L   M   G 
Sbjct: 465 ISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH 524

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P +  Y  L+   C+Q +MK ++      +  G+ P   TY  ++ G+ + G+ S  V 
Sbjct: 525 VPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS-SVDVD 583

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSK 557
            F   ++ G   D  +Y AL++   K SK
Sbjct: 584 IFN--SEKGLVTDYASYTALVNESSKTSK 610



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 7/321 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G ++EGF +   M + G+     T + ++   C+ G ++    +FDEMC RG
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C+ G+V  A +    ML +G   D  T   LI   C     G +K
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV---GDLK 405

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ EM   G KP+  T T LIDG CK G  E A  +  ++V       +V  +TA+
Sbjct: 406 EARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDV-AFTAL 464

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C+E +++ A  +L  M   G  P+  TYT +I   CK G+ +  + L+  M  +G 
Sbjct: 465 ISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH 524

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YNA+++GLCK+G+++ A  LL       +  + ITY ILL  H K   +   + 
Sbjct: 525 VPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VD 583

Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
           +F    + GL  D  +YT L+
Sbjct: 584 IFNS--EKGLVTDYASYTALV 602



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 17/361 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G +     +  E+   GL     + N ++   C+ G VE    +   M + G
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEG 313

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           VC D  ++  ++   C+ GR+ E       M  RG + +  T T LI   C KG  G + 
Sbjct: 314 VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC-KG--GKVD 370

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +  + M+ +G +P++ T+  LI+GLCK G  ++A RL  ++  S   KP+  T+T +
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS-GLKPDKITFTTL 429

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK+  M  A  +  RM E+G+  +   +T+LI G C+ G    A  ++  M   G 
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK-----ITYTILLSEHLKQAET 453
            P+   Y  +ID  CKKG V+  ++LLK     E+Q+D      +TY  L++   KQ + 
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLK-----EMQSDGHVPGVVTYNALMNGLCKQGQM 544

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K A  L   M+  G+ P+   Y  L+    +     + + F  E    GL     +YT++
Sbjct: 545 KNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE---KGLVTDYASYTAL 601

Query: 514 I 514
           +
Sbjct: 602 V 602



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 7/294 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GRL EG  +  EM   GL     T   ++   C+ G V+ A + F  M A+G
Sbjct: 324 LINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG 383

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++   C++G + EA R ++ M   G   D  T T LI   C     G ++
Sbjct: 384 VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKD---GDME 440

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+   MV +G + +    T LI GLC++G    A R+   ++ S  +KP+  TYT +
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML-SAGFKPDDPTYTMV 499

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +CK+  +     LL+ M+  G +P   TY +L+ G CK G  + A  L+D M   G 
Sbjct: 500 IDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGV 559

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
            PN   YN ++DG  K G   +  ++     ++ L  D  +YT L++E  K ++
Sbjct: 560 APNDITYNILLDGHSKHGSSVDV-DIFNS--EKGLVTDYASYTALVNESSKTSK 610



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 7/230 (3%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L+  E +++  L+  ++ +G  P I+ +  L+  FC+   +  +   F E    GL PT 
Sbjct: 224 LRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTV 283

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            ++ ++I G  + G++    +    M   G  PD  T+ ALI+GLCK+ +LDE    ++ 
Sbjct: 284 VSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDE 343

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKLWIRTVNTLIRKLCSE 622
           M G+G+ P  VT  TL    CK G    A     M++ + +   L   T N LI  LC  
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV--TYNALINGLCKV 401

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             +  A    +++       D+++   L + C +        ++ +R+ E
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVE 451


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 267/547 (48%), Gaps = 20/547 (3%)

Query: 38  NFLANSKQPAFSSTSSSPSPPQS-----LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDI 92
           NFL+ S +  F   S+  +PP S     ++ T+   +  S  +  H  SS  R+     +
Sbjct: 11  NFLS-SPRGGFLCFSTWMTPPTSHCHDPILTTISEAIKVSPTKPLH--SSLKRI-----L 62

Query: 93  DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            SLT    I ++    +       LSFF W      FR  +  Y      L ++     A
Sbjct: 63  PSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEA 122

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
             ++Q +VS   +       F+ V+E    G        + ++    + G    A + F 
Sbjct: 123 QSLLQFVVSRKGK-NSASSVFTSVLEA--RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +    +     S   +     ++   + A  +   +LD G   D     +L+   C + 
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I +A  L  E+ ++G +P V +   LI+G CK G  ++ FRL  + +  +   P+V
Sbjct: 240 ---KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDV 295

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY+ +I+G CKE +++ A  L   M ++GL+PN  T+T+LI GHC  G  +   ++   
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G  P++  YN +I+GLCK G ++EA +L+ +  QR L+ DK TYT+L+    K+ +
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + AL +   MVK G+  D  A+T LI+ FCR+ ++ E+E+  +E + AG+ P   TYT 
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ + G++ +  K  + M   G  P  +TY  L++GLCKQ ++  A    ++M+  G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 573 ISPCEVT 579
           + P ++T
Sbjct: 536 VVPDDIT 542



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 223/426 (52%), Gaps = 9/426 (2%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           +C   + ++A S    VV+  R G+ + +  + S +  RG    N   ++L+ A+ D G+
Sbjct: 113 LCTHKMLSEAQSLLQFVVS--RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGY 170

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                Q F L+    +   +   ++   L D L K   T  A+  + +++    Y P+V 
Sbjct: 171 FSDAIQCFRLVR---KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC-GYPPDVC 226

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +  ++   CKE K+N A++L   + ++GL P   ++ +LI G+CK GN ++ + L   M
Sbjct: 227 KFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM 286

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            +    P+++ Y+ +I+GLCK+G++ +A +L  +   R L  + +T+T L++ H      
Sbjct: 287 MENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA 346

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
              + ++ +M++ G+ PD+  Y TLI   C+   ++E++K   E    GL P K TYT +
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  ++G++ SA++  + M + G   DN+ + ALISG C++ ++ EA +    M+  GI
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESL--DKKL-WIRTVNTLIRKLCSEKRVGMAAL 630
            P + T   + + +CK+GD  T   +L+ +  D  +  + T N L+  LC + ++  A +
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 631 FFHKLL 636
               +L
Sbjct: 527 LLDAML 532



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 158/291 (54%), Gaps = 4/291 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G L +GF +   M  N +     T + ++   C+ G ++ A ++F EMC RG
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C  GR          ML +G   D  T   LI   C  G    ++
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG---DLR 382

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L+ EM ++G KP+ +T+T+LIDG CK+G  E A  +  ++V+      NV  +TA+
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV-AFTAL 441

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+C+E ++  AE  L  M E G+ P+  TYT +I+G CK G+ +  + L+  M  +G 
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            P +  YN +++GLCK+G+++ A  LL       +  D ITY ILL   L+
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQ 552


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 239/507 (47%), Gaps = 8/507 (1%)

Query: 72  SYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAG-SMVALSFFYWAIGFAKFR 130
           S+ Q   +R  PP +     + SL  ++  + V SL  +   S +  + +   I      
Sbjct: 56  SFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLC 115

Query: 131 HFMRLYIVCATSLISNG---NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           H  R ++  A S +        +  H     +++      ++ +   +  E+   G    
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPS 175

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T   ++   C++G    A ++  +M  +G   D  +Y  ++ + C+  R  EA  + S
Sbjct: 176 LITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+D+G   +  T + ++  FC+    G + +A  L ++M+ +   PN  T T+L+DGLC
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCN---LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G   +A R+F +++  +  +P+ +TY+A++ GYC + +M+ A+ L + M  +G  P+ 
Sbjct: 293 KEGMILEARRVF-EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             Y  LI GHCK      A  L+  M     TP+   Y+ ++ G C+ GR Q A +L K+
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                L  D ITY+ILL    K     +A  L   M ++ + P I  Y  LI   C   K
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++ + + F      G+ P+  TYT MI G L++G  + A + F++M   GC P++ TY  
Sbjct: 472 LEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531

Query: 548 LISGLCKQSKLDEACQFYESMIGKGIS 574
            I G  +      A +  E M+G+G S
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMVGRGFS 558



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 206/432 (47%), Gaps = 4/432 (0%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            FS + +M   GL     T   ++   C    +  A ++FDE+   G      +Y  ++ 
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C++G  T A + L  M ++G   D      +I + C K  R +  +A     EMV +G
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLC-KDRRAN--EAMYFFSEMVDQG 241

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV T++ ++ G C  G   +A  LF +++   N  PN  T+T ++ G CKE  +  A
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMI-GRNVMPNTVTFTILVDGLCKEGMILEA 300

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             + E M E G+ P+  TY++L+ G+C     + A  L D+M  +G  P++  YN +I+G
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK  R+ EA  LL + + R+L  D +TY+ L+    +    + A  LF  M   GL PD
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y+ L+   C+   + E+ +  +    + + P    Y  +I G    G + +A + F 
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS 480

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            +   G  P  +TY  +ISGL K+   +EAC+ +  M+  G  P   T       + + G
Sbjct: 481 NLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540

Query: 592 DSATAMIILESL 603
           D + A+ ++E +
Sbjct: 541 DPSNAVRLIEEM 552



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 196/391 (50%), Gaps = 4/391 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +IG       ++ +M   G        N V+   C+      A   F EM  +G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  +C +G++ EA      M+ R  + +  T T+L+   C +G     +
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + FE++ E    G +P+ YT++ L+DG C +   ++A +LF  +V    + P+V  Y  +
Sbjct: 302 RVFEMMTE---NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV-GKGFAPSVRVYNIL 357

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK  ++N A+ LL  M ++ L P+T TY++L+ G C+ G  + A  L   M   G 
Sbjct: 358 INGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ ++DGLCK G + EA+ LLK   + +++     Y IL+       + + A  
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +   G+ P +  YT +I+   ++    E+ + F++ +  G  P   TY   I G+L
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           R+G+ S+AV+  + M   G + D+ T+  L+
Sbjct: 538 RNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 46/285 (16%)

Query: 167 GRLKEGFSMVIE-------MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           G  KEG  M++E       MT NG+     T + ++   C    ++ A+++FD M  +G 
Sbjct: 290 GLCKEG--MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
                 Y +++  +C+  R+ EA   LS M DR    D  T + L+  FC  G R  + Q
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG-RPQVAQ 406

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD------------- 326
             +L +EM   G  P+  T+++L+DGLCK G  ++AFRL   +  S              
Sbjct: 407 --KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464

Query: 327 ---------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
                                  +P+V TYT MISG  KE   N A  +  +M   G LP
Sbjct: 465 GMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           N+ TY   I G  + G+   A  L++ M   G + +   +  ++D
Sbjct: 525 NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 251/552 (45%), Gaps = 23/552 (4%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM--- 159
           ++ +L  +   + AL  F WA     F     +Y      L   G+FE    V++ M   
Sbjct: 67  LIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLS 126

Query: 160 ------------VSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEY 206
                       V S+ +     E   +V  M +   +   T   N ++ +  +   ++ 
Sbjct: 127 GCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKL 186

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
            E     M  R +  D S++ +++ A C+  +V  A   +  M   G   D  T T ++ 
Sbjct: 187 VESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQ 246

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            + + G   ++  A  + E+MV  G      T  VLI+G CK+G  ++A   F++   S+
Sbjct: 247 GYIEGG---NLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS-FIQEAVSE 302

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            ++P+  TY  +++G CK      A  +++ M   GL P+  TY SLI G CK+G  E A
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++D M    C+PN   YNAII  LCK+ RV EA E+ +    + +  D  T+  L+  
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
               +  K A+ LF  M   G  PD   Y  LI + C  +K++E+    +E    G    
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y ++I G+ ++  I  A + F  M   G + D++TY  LI GLCK  ++++A Q  +
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            MI +G+ P + T  +L   +CK GD   A  I++++        I T  TLI  LC   
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602

Query: 624 RVGMAALFFHKL 635
           RV +A+     +
Sbjct: 603 RVQVASRLLRSI 614



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 214/423 (50%), Gaps = 6/423 (1%)

Query: 153 HEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           H+V     ++ +  +  +++    M+ EM + GL    +T   ++    E G ++ A  +
Sbjct: 201 HDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 260

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            ++M   G      +  +++  +C+ GR+ +A  ++   +  G   D  T   L+   C 
Sbjct: 261 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G     K A E+++ M+  G  P++YT+  LI GLCK G  E+A ++  ++V  D   P
Sbjct: 321 IG---HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD-CSP 376

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  TY A+IS  CKE +++ A  +   +  +G+LP+  T+ SLI G C   N + A DL 
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M  +GC P+ + YN +ID LC   +++EA  LLK+        + + Y  L+    K 
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              ++A  +F  M   G++ D   Y TLI   C+ K+++++ +   + I  GL P K TY
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S++  + + G+I  A    Q M   GC PD +TY  LISGLCK  ++  A +   S+  
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616

Query: 571 KGI 573
           KG+
Sbjct: 617 KGM 619



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 227/462 (49%), Gaps = 7/462 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            ST N ++   C+   V  A  + +EM + G+  D +++  ++  Y   G +  A R   
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M++ G    + T+ +LI  FC +G    I QA   ++E V +G++P+ +T+  L++GLC
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQG---RIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G  + A  +   ++      P+++TY ++ISG CK  ++  A  +L++M  +   PN 
Sbjct: 320 KIGHAKHAMEVVDAMLLG-GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY ++I   CK    + A ++  L+  +G  P++  +N++I GLC     + A +L ++
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              +  + D+ TY +L+       + ++AL L   M   G   ++  Y TLI  FC+ K+
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++E+E+ F E    G+     TY ++I G  +   +  A +   +M   G  PD  TY +
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L++  CK   + +A    ++M   G +P  VT  TL    CK G    A  +L S+  K 
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618

Query: 608 WIRT---VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            + T    N +I+ L    R   A   F ++L K +  D ++
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 197/433 (45%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + E G L     +  +M   G P    T+N ++   C+ G ++ A     E  + G
Sbjct: 244 IMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V   C++G    A   + AML  G   D  T   LI+  C     G I+
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK---LGEIE 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L++MV +   PN  T+  +I  LCK+   ++A  +  +L+ S    P+V T+ ++
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI-ARLLTSKGILPDVCTFNSL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C       A  L E MK +G  P+  TY  LI   C     E A +L+  M   GC
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+  YN +IDG CK  R++EA E+  +   + +  D +TY  L+    K    + A  
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  GL PD   Y +L+  FC+   +K++    Q   ++G  P   TY ++I G  
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A +  + +   G       Y  +I  L K+++  EA + +  M+ K   P  +
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659

Query: 579 TRVTLAYEYCKQG 591
           T   +    C  G
Sbjct: 660 TYKIVYRGLCNGG 672



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 202/453 (44%), Gaps = 8/453 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNAT 260
           G  EY   V +EM   G   D   + + V +Y +     E    +  M D   I  D   
Sbjct: 111 GSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRF 170

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +L+    D      ++ A      MVR+  + +V T  +LI  LCK      A  L +
Sbjct: 171 YNVLLNVLVDANKLKLVESAHS---SMVRRRIRHDVSTFNILIKALCKAHQVRPAI-LMM 226

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           + + S    P+  T+T ++ GY +   ++ A  + E+M E G      T   LI G CK 
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  ++A   +     EG  P+ + YN +++GLCK G  + A E++       L  D  TY
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L+S   K  E ++A+ +  +MV    +P+   Y  +I++ C++ ++ E+ +  +   +
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ P   T+ S+I G     N  SA+  F+ M   GC PD  TY  LI  LC   KL+E
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
           A    + M   G +   V   TL   +CK      A  I + ++ +   R   T NTLI 
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            LC  KRV  AA    +++ +    D+ +  +L
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 207/456 (45%), Gaps = 7/456 (1%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           +S Y+ ++    + G      R L  M   G   D     + + ++        +    +
Sbjct: 97  SSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVK 156

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           ++E+  R   KP+   + VL++ L      +        +VR    + +V T+  +I   
Sbjct: 157 VMEDEYR--IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRR-RIRHDVSTFNILIKAL 213

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK  ++  A +++E M   GL P+  T+T+++ G+ + GN + A  + + M + GC    
Sbjct: 214 CKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTD 273

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
              N +I+G CK+GR+ +A   +++A     + D+ TY  L++   K    K A+ +   
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+  GL+PDI+ Y +LI+  C+  +++E+ K   + ++    P   TY ++I    ++  
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A +  + +   G  PD  T+ +LI GLC  S    A   +E M GKG  P E T   
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L    C       A+ +L+ ++     R V   NTLI   C  KR+  A   F ++  + 
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 640 QNVDRVSLAALKNACYESNKYALFSDL-SQRIAEGI 674
            + D V+   L +   +S +    + L  Q I EG+
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 149/307 (48%), Gaps = 8/307 (2%)

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           K+   +P+++ Y  ++    K G+FE    +++ M   GC  +   +   ++   K    
Sbjct: 89  KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148

Query: 419 QEAYELLK-KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            E   ++K    +  ++ D   Y +LL+  +   + K        MV+  +  D+  +  
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI A C+  +++ +    +E  + GL P + T+T+++ GY+  GN+  A++  ++M + G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C   ++T   LI+G CKQ ++D+A  F +  + +G  P + T  TL    CK G +  AM
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 598 -----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
                ++L  LD  ++  T N+LI  LC    +  A     +++ +D + + V+  A+ +
Sbjct: 329 EVVDAMLLGGLDPDIY--TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 653 ACYESNK 659
           +  + N+
Sbjct: 387 SLCKENR 393



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 40/271 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S     +L+E  +++ EM  NG        N ++   C+   +E AEE+FDEM  +G
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y  ++   C+  RV +A + +  M+  G   D  T   L+T FC  G    IK
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG---DIK 570

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++++ M   G  P++ T+  LI GLCK G  + A RL L+ ++        H Y  +
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL-LRSIQMKGMVLTPHAYNPV 629

Query: 339 ISGYCKEEKMNRA-----EMLLE-------------------------------RMKEQG 362
           I    K  + + A     EML +                                M E+G
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +P  +++  L  G C +   +    L+D++
Sbjct: 690 NIPEFSSFVMLAEGLCTLSMDDTLVKLVDMI 720


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 238/474 (50%), Gaps = 15/474 (3%)

Query: 142 SLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           +++ +GN     +++ C  ++  F  +G+ ++   ++  +  +G      T N ++   C
Sbjct: 127 NMVYHGNVP---DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           + G +  A  V D M    V  D  +Y  ++ + C  G++ +A   L  ML R    D  
Sbjct: 184 KAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T T+LI A C D G    + QA +LL+EM  +G  P+V T+ VL++G+CK+G  ++A + 
Sbjct: 241 TYTILIEATCRDSG----VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK- 295

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           FL  + S   +PNV T+  ++   C   +   AE LL  M  +G  P+  T+  LI   C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G   RA D+++ M K GC PN  +YN ++ G CK+ ++  A E L++   R    D +
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +L+   K  + + A+ +  ++   G +P +  Y T+I    +  K  ++ K   E 
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P   TY+S++ G  R+G +  A+K+F    ++G  P+ +T+ +++ GLCK  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRT 611
           D A  F   MI +G  P E +   L      +G +  A+ +L  L +K L  R+
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRS 589



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 216/435 (49%), Gaps = 12/435 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E   +  + M   G   D      ++  +CRMG+  +A + L  +   GA+ D  T 
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            ++I+ +C  G    I  A  +L+ M      P+V T+  ++  LC  G  ++A  +  +
Sbjct: 176 NVMISGYCKAG---EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +++ D Y P+V TYT +I   C++  + +A  LL+ M+++G  P+  TY  L+ G CK G
Sbjct: 230 MLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   ++ M   GC PN+  +N I+  +C  GR  +A +LL    ++      +T+ 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +A+ +  +M K G  P+  +Y  L+  FC++KKM  + ++ +  ++ 
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY +M+    +DG +  AV+   +++  GC+P  ITY  +I GL K  K  +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIR 617
            +  + M  K + P  +T  +L     ++G    A+      + ++ +R    T N+++ 
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGVRPNAVTFNSIML 527

Query: 618 KLCSEKRVGMAALFF 632
            LC  ++   A  F 
Sbjct: 528 GLCKTRQTDRAIDFL 542



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 7/379 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +++ F+ LE MV  G  P++   T LI G C+ G T KA ++ L+++      P+V T
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI-LEVLEGSGAVPDVIT 174

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  MISGYCK  ++N A  +L+RM    + P+  TY +++   C  G  ++A +++D M 
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +  C P++  Y  +I+  C+   V +A +LL +   R    D +TY +L++   K+    
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+     M  +G  P++  +  ++ + C   +  ++EK   + +  G  P+  T+  +I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R G +  A+   ++M + GC P++++Y  L+ G CK+ K+D A ++ E M+ +G  
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  T+    CK G    A+ IL  L  K     + T NT+I  L    + G A   
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 632 FHKLLGKDQNVDRVSLAAL 650
             ++  KD   D ++ ++L
Sbjct: 472 LDEMRAKDLKPDTITYSSL 490



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 6/260 (2%)

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G  E  +  ++ M   G  P+I     +I G C+ G+ ++A ++L+         D I
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY +++S + K  E   AL +  RM    ++PD+  Y T++ + C   K+K++ +     
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +    +P   TYT +I    RD  +  A+K    M   GC PD +TY  L++G+CK+ +L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +F   M   G  P  +T   +    C  G    A  +L  + +K +   + T N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 616 IRKLCSEKRVGMAALFFHKL 635
           I  LC +  +G A     K+
Sbjct: 351 INFLCRKGLLGRAIDILEKM 370



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 10/198 (5%)

Query: 445 SEHLKQ----AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + HL+Q     E ++       MV  G  PDI   TTLI  FCR  K +++ K  +    
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G  P   TY  MI GY + G I++A+    RM+    +PD +TY  ++  LC   KL +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIR 617
           A +  + M+ +   P  +T   L    C+      AM +L+ +  +     + T N L+ 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 618 KLCSEKRVGMAALFFHKL 635
            +C E R+  A  F + +
Sbjct: 283 GICKEGRLDEAIKFLNDM 300



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R G +    K+ + M   G  PD I    LI G C+  K  +A +  E + G G  P  
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   +   YCK G+   A+ +L+ +     + T NT++R LC   ++  A     ++L 
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           +D   D ++   L  A C +S
Sbjct: 233 RDCYPDVITYTILIEATCRDS 253


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 230/477 (48%), Gaps = 24/477 (5%)

Query: 143 LISNGNFERAHEVMQCMV---------------SSFAEIGRLKEG-FSMVIEMTNNGLPL 186
           L+ NG  E   + ++ MV                 F  IG+ K+  + M I   +  +P 
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
           +  T N ++   C+ G ++ A +V D M    V  D  +Y  ++   C  G++ +A   L
Sbjct: 184 VI-TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
              L +    D  T T+LI A C +     + QA +LL+EM  KG KP+V T+ VLI+G+
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKES---GVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK+G  ++A + FL  + S   +PNV T+  ++   C   +   AE LL  M  +G  P+
Sbjct: 297 CKEGRLDEAIK-FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             T+  LI   C+ G   RA D+++ M   GCTPN  +YN ++ G CK+ ++  A E L 
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
               R    D +TY  LL+   K  +   A+ +  ++   G +P +  Y T+I    +  
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K + + K   E    GL P   TY+S++ G  R+G +  A+K+F  +  +G  P+ ITY 
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +++ GLCK  + D A  F   MI K   P E T   L      +G +  A+ +L  L
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 7/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + + G +     ++  M  N  P +  T N ++   C+ G ++ A EV D    + 
Sbjct: 190 LISGYCKSGEIDNALQVLDRM--NVAPDVV-TYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++ A C+   V +A + L  M ++G+  D  T  +LI   C +G    + 
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG---RLD 303

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L  M   G +PNV TH +++  +C  G    A +L   ++R     P+V T+  +
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNIL 362

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C++  + RA  +LE+M   G  PN+ +Y  L++G CK    +RA + +D+M   GC
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN ++  LCK G+V  A E+L +   +      ITY  ++    K  +T++A+ 
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + GL PDI  Y++L++   R+ K+ E+ KFF +    G+ P   TY S++ G  
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +      A+ +   M    C P   TY  LI G+  +    EA      +  +G+
Sbjct: 543 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + +  ++L +M+ RG I D    T LI  FC     G  K+A  ++E + + G  P
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRI---GKTKKATWVMEILEQSGAVP 182

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+ VLI G CK G  + A ++  ++    N  P+V TY  ++   C   K+ +A  +
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+R  ++   P+  TYT LI   CK     +A  L+D M  +G  P++  YN +I+G+CK
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +GR+ EA + L        Q + IT+ I+L           A  L   M++ G +P +  
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   CRQ  +  +    ++    G  P   +Y  ++ G+ ++  +  A++Y   M 
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K+D A +    +  KG SP  +T  T+     K G + 
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            A+ +L+ + +K     I T ++L+  L  E +V  A  FFH L G
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 9/337 (2%)

Query: 306 LCKKGWTEKAFRLFLKLV-RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           L + G  E  F+    +V R D   P++   T++I G+C+  K  +A  ++E +++ G +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGD--IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV 181

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY  LI G+CK G  + A  ++D M      P++  YN I+  LC  G++++A E+
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +  Q+E   D ITYTIL+    K++   QA+ L   M   G  PD+  Y  LI   C+
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + ++ E+ KF     + G  P   T+  ++      G    A K    M + GC+P  +T
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +  LI+ LC+Q  L  A    E M   G +P  ++   L + +CK+     A+  L+ + 
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 605 KKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +     I T NTL+  LC + +V +A    ++L  K
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 7/179 (3%)

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             R  ++++  KF +  +  G  P     TS+I G+ R G    A    + + Q G  PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            ITY  LISG CK  ++D A Q  + M    ++P  VT  T+    C  G    AM +L+
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 602 -SLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE 656
             L K+ +  + T   LI   C E  VG A     ++  K    D V+   L N  C E
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 66/272 (24%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++ +M   G      T N ++   C  GL+  A ++ ++M   G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
              ++ SY  ++  +C+  ++  A  +L  M+ RG   D  T   L+TA C  G      
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G  ++A +LL+EM RKG KP++ T++ L+ GL
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506

Query: 307 CKKGWTEKAFRLF----------------------------------LKLVRSDNYKPNV 332
            ++G  ++A + F                                  L  + S   KP  
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 566

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            TYT +I G   E     A  LL  +  +GL+
Sbjct: 567 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +    K+ + M   G  PD I   +LI G C+  K  +A    E +   G  P  
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   L   YCK G+   A+ +L+ ++    + T NT++R LC   ++  A     + L 
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           K+   D ++   L  A C ES
Sbjct: 245 KECYPDVITYTILIEATCKES 265


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 197/403 (48%), Gaps = 5/403 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           VVG  C  GL+ +A  +F  M  RG    A +Y  ++   C  G V EA    + M   G
Sbjct: 114 VVGY-CRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADG 172

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D      ++   C  G     ++A  LL + + +G++PNV  +  LIDG C  G  E
Sbjct: 173 CAPDPHVYATMVHGLCGAG---RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLE 229

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F ++   +   PNV TYT +ISG+CK  K++RA ML  RM + GL+PN  TYT+L
Sbjct: 230 LAVDVFERM-DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTAL 288

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C  G  + AY L+  M   G  PN +  + +ID LCK  RV EA  LL    Q+ +
Sbjct: 289 IQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGI 348

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + ++I YT L+    K      A  L   +V  G  PD H Y++LI   CRQK++ E+  
Sbjct: 349 KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAML 408

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              + +  G+ P+  TYT +I   +R+     + K   +M   G  PD  TY   +   C
Sbjct: 409 VLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYC 468

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            + ++++A      M+  G+ P  VT   L   Y   G ++ A
Sbjct: 469 HEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQA 511



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/595 (25%), Positives = 249/595 (41%), Gaps = 94/595 (15%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           +SL+  G    +H      V  +   G L     + + M   G      T   ++   C 
Sbjct: 96  SSLLRAGFAPDSHAYTS-FVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCG 154

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G+V  A  VF  M A G   D   Y  MV   C  GR  EA+  LS  +  G   +   
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
              LI  +C+ G    ++ A ++ E M   G  PNV T+T LI G CK    ++A  LF 
Sbjct: 215 YNALIDGYCNVG---DLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFS 271

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT----------- 369
           ++V +    PNV TYTA+I G C + +++ A  LL+ M+  GL+PN  T           
Sbjct: 272 RMVDA-GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKH 330

Query: 370 ------------------------YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
                                   YTSLI G CK G F  A  LM  +  +G  P+ + Y
Sbjct: 331 ERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTY 390

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +++IDGLC++  + EA  +L    ++ +Q   +TYTI++ E +++     +  +  +M+ 
Sbjct: 391 SSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIA 450

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           AG+ PD+  YT  + ++C + +M+++E      +  G+ P   TY ++ICGY   G  S 
Sbjct: 451 AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQ 510

Query: 526 AVKYFQRMNQIGCAPDNITYGAL------------------------------------- 548
           A   F+ M   GC P+  +Y  L                                     
Sbjct: 511 AFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMV 570

Query: 549 --------------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                         ++ LC+  +LDEA      M    ++P E    ++    C+     
Sbjct: 571 KLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLT 630

Query: 595 TAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            A+  ++S+ K  +I  + +   +I  LC E  +  A   F  +L K+ N + ++
Sbjct: 631 EALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIA 685



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 190/404 (47%), Gaps = 7/404 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++ AYC  G +  + R LS++L  G   D+   T  +  +C  G    +  A  L 
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGL---LAHACRLF 130

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M  +G     +T+T L+ GLC  G   +A  +F  + ++D   P+ H Y  M+ G C 
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM-QADGCAPDPHVYATMVHGLCG 189

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +   AE LL     +G  PN   Y +LI G+C VG+ E A D+ + M   GC+PN+  
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +I G CK  ++  A  L  +     L  + +TYT L+       +   A  L   M 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            +GL P+    + LI A C+ +++ E++      I  G+   +  YTS+I G  + G  +
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +A +  Q +   G  PD  TY +LI GLC+Q +L EA    + M+ KG+ P  VT   + 
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 585 YEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRV 625
            E  ++  +  +  IL+ +     K  + T    +R  C E R+
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRM 473



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 171/347 (49%), Gaps = 4/347 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N+ T+T LI+  C  G    + R    L+R+  + P+ H YT+ + GYC+   +  A  L
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRA-GFAPDSHAYTSFVVGYCRAGLLAHACRL 129

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              M  +G +    TYT+L++G C  G    A  +   M  +GC P+ + Y  ++ GLC 
Sbjct: 130 FVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG 189

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            GR +EA  LL  A     + + + Y  L+  +    + + A+ +F RM   G +P++  
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT LI+ FC+ +K+  +   F   + AGL P   TYT++I G   DG +  A +  Q M 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P+  T   LI  LCK  ++ EA     S+I KGI   E+   +L    CK G  A
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 595 TAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            A  ++++L  + ++    T ++LI  LC +K +  A L    ++ K
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 216/486 (44%), Gaps = 58/486 (11%)

Query: 140 ATSLISNG---NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           A +L+S+     FE    V   ++  +  +G L+    +   M  NG      T   ++ 
Sbjct: 196 AETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS 255

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C+   ++ A  +F  M   G+  +  +Y  ++   C  G++  A R L +M + G + 
Sbjct: 256 GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +  T ++LI A C     G   +A  LL  +++KG K N   +T LIDGLCK G    A 
Sbjct: 316 NEWTCSVLIDALCKHERVG---EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI-- 374
           RL   LV S  + P+ HTY+++I G C++++++ A ++L+ M E+G+ P+  TYT +I  
Sbjct: 373 RLMQTLV-SQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDE 431

Query: 375 ---------------------------------YGHCKVGNFERAYDLMDLMGKEGCTPN 401
                                              +C  G  E A  +M  M   G  PN
Sbjct: 432 LVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ----------- 450
           +  YNA+I G    G   +A+   K       + ++ +YT+LL   +K+           
Sbjct: 492 LVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSV 551

Query: 451 -----AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
                AE K   GL   MVK  L  +I  Y   + + CR  ++ E++    E  +A L P
Sbjct: 552 SIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTP 611

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +++ YTS+I    R   ++ A+ +   M + G  P   +Y  +IS LC++  +  A Q +
Sbjct: 612 SEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVF 671

Query: 566 ESMIGK 571
             M+ K
Sbjct: 672 GDMLSK 677



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 152/343 (44%), Gaps = 38/343 (11%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+ TYT +I+ YC    +  ++  L  +   G  P+++ YTS + G+C+ G    A  L 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            LM   GC    + Y A++ GLC  G V+E                              
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVRE------------------------------ 160

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                A+ +F  M   G  PD H Y T++   C   + +E+E    +A+  G  P    Y
Sbjct: 161 -----AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I GY   G++  AV  F+RM+  GC+P+  TY  LISG CK  KLD A   +  M+ 
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGM 627
            G+ P  VT   L    C  G    A  +L+S++    +    T + LI  LC  +RVG 
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           A L    L+ K   V+ +   +L +   ++ ++A    L Q +
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 197/427 (46%), Gaps = 20/427 (4%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L   + ++  M N+GL     T + ++   C+   V  A+ +   +  +G+  +   Y
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ GR   ADR +  ++ +G + D  T + LI   C +     + +A  +L++
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK---ELSEAMLVLDD 412

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ KG +P+  T+T++ID L ++   + + ++  K++ +   KP+V TYT  +  YC E 
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAA-GIKPDVFTYTIFVRSYCHEG 471

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +M  AE ++  M + G+ PN  TY +LI G+  +G   +A+     M   GC PN  +Y 
Sbjct: 472 RMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYT 531

Query: 407 AIIDGLCKK----------------GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            ++  L KK                  ++  + LL++  + +L ++   Y   L+   + 
Sbjct: 532 VLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRV 591

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A  L   M  A L P    YT++IA  CR K + E+  F    + +G  P  E+Y
Sbjct: 592 DRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESY 651

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             +I     +G+I +A + F  M       + I +  LI GL ++  + E       M  
Sbjct: 652 RHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE 711

Query: 571 KGISPCE 577
           K   P +
Sbjct: 712 KNYRPSD 718



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 157/371 (42%), Gaps = 33/371 (8%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-------PLITSTLNRV 194
           +L+S G    AH     ++        L E   ++ +M   G+        +I   L R 
Sbjct: 377 TLVSQGFVPDAH-TYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVRE 435

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           VG        + ++++ D+M A G+  D  +Y + V +YC  GR+ +A+  +  M+D G 
Sbjct: 436 VG-------ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE- 313
             +  T   LI  + + G      QAF   + MV  G KPN  ++TVL+  L KK  +  
Sbjct: 489 CPNLVTYNALICGYANLGL---TSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNN 545

Query: 314 --------------KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                         K     L+ +        +  Y   ++  C+ ++++ A++LL  M+
Sbjct: 546 IPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQ 605

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              L P+ + YTS+I   C++     A   +D M K G  P + +Y  II  LC++G +Q
Sbjct: 606 SANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQ 665

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A ++      +E   ++I + IL+   L++    +   L   M +    P    Y  L 
Sbjct: 666 TAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLT 725

Query: 480 AAFCRQKKMKE 490
                   ++E
Sbjct: 726 GKITDANDIQE 736


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 234/461 (50%), Gaps = 17/461 (3%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG---------RVTE 241
            N++V + C+ GLV  +E +  ++  RGVC +  ++ + V   CR G         RV E
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A+ +L  M++ G   D+ T   +I  +C KG    ++ A  +L++ V KG+KP+ +T+  
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGM---VQDANRVLKDAVFKGFKPDEFTYCS 335

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           LI+G CK G  ++A  +F K       +P++  Y  +I G  ++  +  A  L+  M E 
Sbjct: 336 LINGFCKDGDPDRAMAVF-KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G LPN  TY  +I G CK+G    A  L+D    +GC P+I+ YN +IDG CK+ ++  A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            E++ + + + +  D ITY  LL+   K  ++++ + +F  M + G  P+I  Y  ++ +
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-NQIGCAP 540
            C+ KK+ E+     E  + GL P   ++ ++  G+ + G+I  A + F+RM  Q     
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH 574

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-II 599
              TY  ++S   +Q  ++ A + +  M   G  P   T   +   +CK G+       +
Sbjct: 575 TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFL 634

Query: 600 LESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           LE+++K+    + T   ++  LC + +V  A    H +L K
Sbjct: 635 LENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 203/415 (48%), Gaps = 7/415 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + SF +  R      ++  M   G          VV    + G  ++A E+FDEM AR +
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKGFR 274
           C D  ++  +V   C+ G V E++R L  +L RG   +  T  + +   C     D+  R
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR 272

Query: 275 GS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            S + +A E L +MV  G++P+  T+  +IDG CKKG  + A R+ LK      +KP+  
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV-LKDAVFKGFKPDEF 331

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY ++I+G+CK+   +RA  + +    +GL P+   Y +LI G  + G    A  LM+ M
Sbjct: 332 TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + GC PNI+ YN +I+GLCK G V +A  L+  A  +    D  TY  L+  + KQ + 
Sbjct: 392 AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKL 451

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A  +  RM   G+ PD+  Y TL+   C+  K +E  + F+     G  P   TY  +
Sbjct: 452 DSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNII 511

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +    +   ++ AV     M   G  PD +++G L +G CK   +D A Q +  M
Sbjct: 512 VDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 212/443 (47%), Gaps = 9/443 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E    + +M N G      T N ++   C+ G+V+ A  V  +   +G   D  +Y 
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  +C+ G   + DR ++   D        ++ L  T       +G I  A +L+ EM
Sbjct: 335 SLINGFCKDG---DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G  PN++T+ ++I+GLCK G    A  L    + +    P++ TY  +I GYCK+ K
Sbjct: 392 AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI-AKGCPPDIFTYNTLIDGYCKQLK 450

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  ++ RM  QG+ P+  TY +L+ G CK G  E   ++   M ++GCTPNI  YN 
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA- 466
           I+D LCK  +V EA +LL +   + L+ D +++  L +   K  +   A  LF RM K  
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            +      Y  +++AF  Q  M  + K F     +G  P   TY  +I G+ + GNI+  
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQG 630

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            K+     +    P   T+G +++ LC + K+ EA      M+ KGI P  V  +  A  
Sbjct: 631 YKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEA-- 688

Query: 587 YCKQGDSATAMIILESLDKKLWI 609
              +   A   I++E L KK  I
Sbjct: 689 --DKKVVAAPKILVEDLLKKGHI 709



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 223/519 (42%), Gaps = 17/519 (3%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGL 203
           S   F+      +C+V      G  +E   ++ EM  N    L+       +      G 
Sbjct: 32  SEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGK 91

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A + F+ M          S+  ++      G   +A +    M DRG   D  T T+
Sbjct: 92  VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTI 151

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I +FC          A  LL  M   G   N   +  ++ GL   G  + A  LF +++
Sbjct: 152 RIKSFCKTA---RPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEML 208

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +    P+V  +  ++   CK+  +  +E LL ++ ++G+ PN  T+   + G C+ G  
Sbjct: 209 -ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 384 ERAY---------DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           +RA          + +  M   G  P+   YN+IIDG CKKG VQ+A  +LK A  +  +
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D+ TY  L++   K  +  +A+ +F   +  GL P I  Y TLI    +Q  +  + + 
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             E    G  P   TY  +I G  + G +S A          GC PD  TY  LI G CK
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRT 611
           Q KLD A +    M  +G++P  +T  TL    CK G S   M I +++++K     I T
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            N ++  LC  K+V  A     ++  K    D VS   L
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 209/450 (46%), Gaps = 17/450 (3%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT-LLITAFCDKGFRGSIKQAF 281
           AS+YK +V      G   E ++ LS M +    ++NA L    I A  + G +G +++A 
Sbjct: 40  ASTYKCIVQKLGHHGEFEEMEKLLSEMREN---VNNALLEGAYIEAMKNYGRKGKVQEAV 96

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +  E M      P+V++H  +++ L + G+  +A ++++++ R    + +V+TYT  I  
Sbjct: 97  DTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM-RDRGVQSDVYTYTIRIKS 155

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           +CK  +   A  LL  M E G   N   Y +++ G    G  + A +L D M      P+
Sbjct: 156 FCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPD 215

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL---------LSEHLKQAE 452
           + A+N ++  LCKKG V E+  LL K  +R +  +  T+ I          L   ++ + 
Sbjct: 216 VVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSR 275

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A     +MV  G  PD   Y ++I  +C++  ++++ +  ++A+  G  P + TY S
Sbjct: 276 VVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCS 335

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ +DG+   A+  F+     G  P  + Y  LI GL +Q  +  A Q    M   G
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAA 629
             P   T   +    CK G  + A  +++    K     I T NTLI   C + ++  A 
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSAT 455

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              +++  +    D ++   L N   ++ K
Sbjct: 456 EMVNRMWSQGMTPDVITYNTLLNGLCKAGK 485



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 164/343 (47%), Gaps = 12/343 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++   ++ G +     ++ EM  NG LP I  T N V+   C++G V  A  + D+  A+
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIW-TYNLVINGLCKMGCVSDASHLVDDAIAK 429

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++  YC+  ++  A   ++ M  +G   D  T   L+   C  G    +
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + F+ +EE   KG  PN+ T+ +++D LCK     +A  L L  ++S   KP+V ++  
Sbjct: 490 MEIFKAMEE---KGCTPNIITYNIIVDSLCKAKKVNEAVDL-LGEMKSKGLKPDVVSFGT 545

Query: 338 MISGYCKEEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           + +G+CK   ++ A  L  RM++Q  +   T TY  ++    +  N   A  L  +M   
Sbjct: 546 LFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNS 605

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P+ Y Y  +IDG CK G + + Y+ L +  ++       T+  +L+    + +  +A
Sbjct: 606 GCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEA 665

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +G+   M++ G+ P+     T+   F   KK+  + K   E +
Sbjct: 666 VGIIHLMLQKGIVPE-----TVNTIFEADKKVVAAPKILVEDL 703



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 52/359 (14%)

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE---QGLLPNTNTY 370
           KA  +F      D +K    TY  ++       +    E LL  M+E     LL     Y
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALL--EGAY 79

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
              +  + + G  + A D  + M    C P+++++NAI++ L + G   +A+++  +   
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139

Query: 431 RELQADKITYTILLSEHLKQA-----------------------------------ETKQ 455
           R +Q+D  TYTI +    K A                                   E   
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  LF  M+   L PD+ A+  L+   C++  + ESE+   + +  G+ P   T+   + 
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 516 GYLRDGNISSAVK---------YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           G  R+G +  AV+         Y ++M   G  PD++TY ++I G CK+  + +A +  +
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSE 622
             + KG  P E T  +L   +CK GD   AM +  + L K L    V  NTLI+ L  +
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 250/562 (44%), Gaps = 79/562 (14%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F  +   +  +V    + G+++E  ++V  +   G+       N ++   C+    + AE
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAE 387

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG---------AILDN- 258
            +FD M   G+C +  +Y +++  +CR G++  A  +L  M+D G         ++++  
Sbjct: 388 LLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGH 447

Query: 259 -------------------------ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
                                     T T L+  +C KG    I +A  L  EM  KG  
Sbjct: 448 CKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKG---KINKALRLYHEMTGKGIV 504

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P++YT T L+ GL + G    A +LF ++    N KPN  TY  MI GYC+E  M++A  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW-NVKPNRVTYNVMIEGYCEEGNMSKAFE 563

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            L  M E+G++P+T +Y  LI+G C  G    A   +D + K  C  N   Y  ++ G C
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++G+++EA  + +    R +  D + Y +L+   LK  + K  LGL   M   GL PD  
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YT++I A  +    KE+   +   I  G  P + TYT++I G  + G ++ A     +M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743

Query: 534 NQIGCAPDNITYGA-----------------------------------LISGLCKQSKL 558
                 P+ +TYG                                    LI G C+Q ++
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRM 803

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNT 614
           +EA +    MIG G+SP  +T  T+  E C++ D   A+ +  S+ +K  IR      NT
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK-GIRPDRVAYNT 862

Query: 615 LIRKLCSEKRVGMAALFFHKLL 636
           LI   C    +G A    +++L
Sbjct: 863 LIHGCCVAGEMGKATELRNEML 884



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 221/465 (47%), Gaps = 42/465 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G +    S++ EM N  L     T   ++G  C  G +  A  ++ EM  +G
Sbjct: 443 LINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     ++  ++    R G + +A +  + M +     +  T  ++I  +C++G   ++ 
Sbjct: 503 IVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG---NMS 559

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFE L EM+ KG  P+ Y++  LI GLC  G   +A ++F+  +   N + N   YT +
Sbjct: 560 KAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGL 618

Query: 339 ISGYCKEEKMNRA-----EM------------------------------LLERMKEQGL 363
           + G+C+E K+  A     +M                              LL+ M ++GL
Sbjct: 619 LHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGL 678

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   YTS+I    K G+F+ A+ + DLM  EGC PN   Y A+I+GLCK G V EA  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEI 738

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQ-AETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           L  K        +++TY   L    K   + K+A+ L   ++K GL  +   Y  LI  F
Sbjct: 739 LCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGF 797

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CRQ +M+E+ +     I  G+ P   TYT+MI    R  ++  A++ +  M + G  PD 
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISP-CEVTRVTLAYE 586
           + Y  LI G C   ++ +A +    M+ +G+ P  E +  T++ +
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISND 902



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M N G+         V+   CEL  +  A+E+  +M A G   +   Y +++   C+  
Sbjct: 217 DMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQ 276

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +V EA      +  +    D  T   L+   C        +   E+++EM+R  + P+  
Sbjct: 277 KVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQ---EFEVGLEMIDEMLRLRFSPSEA 333

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
             + L++GL K+G  E+A  L +K V      PN+  Y A+I   CK    + AE+L +R
Sbjct: 334 AVSSLVEGLRKRGKVEEALNL-VKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDR 392

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M + GL PN  TY+ LI   C+ G  + A   +  M   G  P++Y YN++I+G CK G 
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A  L+ +   ++L+   +TYT L+  +  + +  +AL L+  M   G+ P I+ +TT
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L++   R   ++++ K F E     + P + TY  MI GY  +GN+S A ++   M + G
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKG 572

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD  +Y  LI GLC   +  EA  F + +        E+    L + +C++G    A+
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632

Query: 598 IILESL 603
            + + +
Sbjct: 633 SVCQDM 638



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 200/409 (48%), Gaps = 9/409 (2%)

Query: 202 GLVEY-----AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           GLV++     A E+FD+M   G+  D   Y  ++ + C +  ++ A   +  M   G  +
Sbjct: 201 GLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDV 260

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +     +LI   C K     + +A  + +++  K  KP+V T+  L+ GLCK    E   
Sbjct: 261 NIVPYNVLIDGLCKKQ---KVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGL 317

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +  +++R   + P+    ++++ G  K  K+  A  L++R+ E G+ PN   Y +LI  
Sbjct: 318 EMIDEMLRL-RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK  NF+ A  L D MGK G  PN   Y+ +ID  C++G++  A   L +     L+  
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
              Y  L++ H K  +   A  L   M+   L P +  YT+L+  +C + K+ ++ + + 
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    G+ P+  T+T+++ G  R G I  AVK F  M +    P+ +TY  +I G C++ 
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG 556

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            + +A +F   MI KGI P   +   L +  C  G ++ A + ++ L K
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 184/392 (46%), Gaps = 11/392 (2%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M++ G   D    T +I + C+      + +A E++ +M   G   N+  + VLIDGLCK
Sbjct: 218 MINVGIRPDVYIYTGVIRSLCE---LKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCK 274

Query: 309 KG--WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           K   W     +   K +     KP+V TY  ++ G CK ++      +++ M      P+
Sbjct: 275 KQKVWEAVGIK---KDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPS 331

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
               +SL+ G  K G  E A +L+  + + G +PNI+ YNA+ID LCK     EA  L  
Sbjct: 332 EAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFD 391

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  +  L  + +TY+IL+    ++ +   AL     M+  GL P ++ Y +LI   C+  
Sbjct: 392 RMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFG 451

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            +  +E    E I   L PT  TYTS++ GY   G I+ A++ +  M   G  P   T+ 
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            L+SGL +   + +A + +  M    + P  VT   +   YC++G+ + A   L  + +K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571

Query: 607 LWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
             +    +   LI  LC   +   A +F   L
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 3/312 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P V T +A++ G  K      A  L + M   G+ P+   YT +I   C++ +  RA ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M   GC  NI  YN +IDGLCKK +V EA  + K    +EL+ D +TY  L+    K
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E +  L +   M++   +P   A ++L+    ++ K++E+    +     G+ P    
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y ++I    +  N   A   F RM +IG  P+++TY  LI   C++ KLD A  F   MI
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 570 GKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL--WIRTVNTLIRKLCSEKRVG 626
             G+ P      +L   +CK GD SA   ++ E ++KKL   + T  +L+   CS+ ++ 
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 627 MAALFFHKLLGK 638
            A   +H++ GK
Sbjct: 490 KALRLYHEMTGK 501



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 510 YTSMICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +  +I  Y+R   +   V  F+ M  ++   P+  T  AL+ GL K      A + ++ M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 569 IGKGISPCEVTRVTLAYEYCKQGD--SATAMII-LESLDKKLWIRTVNTLIRKLCSEKRV 625
           I  GI P       +    C+  D   A  MI+ +E+    + I   N LI  LC +++V
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 626 GMAALFFHKLLGKDQNVDRVSLAAL 650
             A      L GK+   D V+   L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTL 303


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 224/436 (51%), Gaps = 11/436 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+    + A++VF+EM  R    +  +Y +M+   CR G V EA  +   M+D G   D 
Sbjct: 254 CKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDA 313

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   L+   C KG R  +K+A  LL+EM   G KPN+  +  L+DG  K+G T +AF +
Sbjct: 314 FTYGALMNGLC-KGSR--LKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI 370

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             +++ S   +PN   Y  +I G CK  ++ RA  LL+ M + GL P+T TY  L+ GH 
Sbjct: 371 LKEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +  + + A++L++ M   G  PN+Y+Y  +I+GLC+ G  +EA  LL++     L+ +  
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y  L+  H K+     A     +M KA ++PD+  Y +LI       +M+E+E+++ + 
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL P + TY+ +I GY + GN+  A +  ++M   G  P+  TY  L+ G  K +  
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TL 615
           ++     +SM+G G  P       +     +  +   A ++L  ++K   +  ++   +L
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 616 IRKLCS----EKRVGM 627
           I  LC     EK VG+
Sbjct: 670 ISGLCKIADMEKAVGL 685



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 239/515 (46%), Gaps = 13/515 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S     G ++E F    EM + GL     T   ++   C+   ++ A+ + DEM   G
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG 343

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  +V  + + G+  EA   L  M+  G   +      LI   C  G  G   
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG--- 400

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL+EM++ G +P+ +T+  L+ G  ++   + AF L L  +R+    PNV++Y  M
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFEL-LNEMRNSGILPNVYSYGIM 459

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C+  +   A  LLE M  +GL PN   Y  LI GH K GN   A + ++ M K   
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ YN++I GL   GR++EA E   +  +R L  D+ TY+ L+  + K    ++A  
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+ +GL P+   YT L+  + +    ++     Q  + +G  P    Y  +I    
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 639

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R  N+  A      + + G  PD   Y +LISGLCK + +++A    + M  +G+ P  V
Sbjct: 640 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIV 699

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
               L   +C+ GD + A  + +S+  K  +    T   LI   C    +  A   + ++
Sbjct: 700 CYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEM 759

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           L +    D      L   C ++      +DL Q +
Sbjct: 760 LDRGIAPDAFVYNVLATGCSDA------ADLEQAL 788



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 232/494 (46%), Gaps = 16/494 (3%)

Query: 117 LSFFYWA---IGFAKFRHFMRLYI-VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG 172
           L FFYW+   I       F RL   +CA SL     F +A+ ++  M+ +      +   
Sbjct: 100 LDFFYWSRPRIAPPSADAFARLAASLCAASL-----FPQANGLLHQMILAHPHPPLVLAS 154

Query: 173 FSMVIEMTNN---GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
               I+ T++        T+ L+ +V    + G V  A +V   M   G+         +
Sbjct: 155 IQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGL 214

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +    R   +    +    M   G + D  T +  I A C      + K+ FE   EM R
Sbjct: 215 LKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFE---EMRR 271

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           +    N  T+ V+I GLC+ G  E+AF    ++V      P+  TY A+++G CK  ++ 
Sbjct: 272 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY-GLSPDAFTYGALMNGLCKGSRLK 330

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A+ LL+ M   GL PN   Y +L+ G  K G    A+D++  M   G  PN   Y+ +I
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLCK G++  A +LLK+  +  L+ D  TY  L+  H +Q +   A  L   M  +G+ 
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++++Y  +I   C+  + KE+    +E I+ GL P    Y  +I G+ ++GNIS A + 
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            ++M +    PD   Y +LI GL    +++EA ++Y  +  +G+ P E T   L + YCK
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570

Query: 590 QGDSATAMIILESL 603
            G+   A  +L  +
Sbjct: 571 TGNLEKADQLLRQM 584



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 236/495 (47%), Gaps = 11/495 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +IG+L     ++ EM   GL   T T N ++    +    + A E+ +EM   G
Sbjct: 389 LIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY +M+   C+ G   EA   L  M+  G   +      LI     +G   +I 
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG---NIS 505

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E LE+M +    P+++ +  LI GL   G  E+A   + + V+     P+  TY+ +
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ-VQKRGLVPDEFTYSGL 564

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK   + +A+ LL +M   GL PN +TYT L+ G+ K  ++E+   ++  M   G 
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  +I  L +   ++ A+ +L +  +  L  D   Y+ L+S   K A+ ++A+G
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M K GL P I  Y  LI  FCR   +  +   F   +  GL P   TYT++I G  
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G+I+ A   ++ M   G APD   Y  L +G    + L++A    E M  +G +   +
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL 804

Query: 579 TRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKL 635
              TL + +CK+G    T  ++   +D+++    +TV  ++ +     ++G A   F +L
Sbjct: 805 FN-TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863

Query: 636 LGKDQN---VDRVSL 647
             K  +    DR SL
Sbjct: 864 QQKKASQSATDRFSL 878



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 173/367 (47%), Gaps = 10/367 (2%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---VRSDNYKPN 331
           GS++ A +++  M   G  P         +GL K      A  L  KL   +      P+
Sbjct: 187 GSVRNAAQVVLMMADLGLAPTRRC----CNGLLKDLLRADAMELLWKLKGFMEGAGILPD 242

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V+TY+  I  +CK    + A+ + E M+ +    N  TY  +I G C+ G  E A+   +
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 302

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G +P+ + Y A+++GLCK  R++EA  LL +     L+ + + Y  L+   +K+ 
Sbjct: 303 EMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEG 362

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +T +A  +   M+ AG+ P+   Y  LI   C+  ++  + K  +E I  GL P   TY 
Sbjct: 363 KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYN 422

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++ G+ +  +   A +    M   G  P+  +YG +I+GLC+  +  EA    E MI +
Sbjct: 423 PLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE 482

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
           G+ P       L   + K+G+ + A   LE + K      +   N+LI+ L +  R+  A
Sbjct: 483 GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542

Query: 629 ALFFHKL 635
             ++ ++
Sbjct: 543 EEYYAQV 549



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 6/243 (2%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           M +  +  T +  NG     H +   ++S   +I  +++   ++ EM   GL       N
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLH-IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYN 702

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            ++   C  G +  A  VFD + A+G+  +  +Y  ++   C+ G +T+A      MLDR
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDR 762

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   D     +L T   D      ++QA  L EEM  +G+  NV     L+ G CK+G  
Sbjct: 763 GIAPDAFVYNVLATGCSDA---ADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKL 818

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++  +L L ++      PN  T   ++S + K  K+  A  +   ++++    +     S
Sbjct: 819 QETEKL-LHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFS 877

Query: 373 LIY 375
           L++
Sbjct: 878 LLF 880



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 15/202 (7%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           QA GL  +M+ A      H +  L+ A   Q+ +++++   +        P+      ++
Sbjct: 133 QANGLLHQMILA------HPHPPLVLASI-QRAIQDTDHRSRSP-----SPSTAVLDVLV 180

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G++ +A +    M  +G AP       L+  L +   ++   +    M G GI 
Sbjct: 181 DTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGIL 240

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P   T  T    +CK  D   A  + E + ++   +   T N +I  LC    V  A  F
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
             +++    + D  +  AL N 
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNG 322


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 230/477 (48%), Gaps = 24/477 (5%)

Query: 143 LISNGNFERAHEVMQCMV---------------SSFAEIGRLKEG-FSMVIEMTNNGLPL 186
           L+ NG  E   + ++ MV                 F  IG+ K+  + M I   +  +P 
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
           +  T N ++   C+ G ++ A +V D M    V  D  +Y  ++   C  G++ +A   L
Sbjct: 127 VI-TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
              L +    D  T T+LI A C +     + QA +LL+EM  KG KP+V T+ VLI+G+
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKES---GVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK+G  ++A + FL  + S   +PNV T+  ++   C   +   AE LL  M  +G  P+
Sbjct: 240 CKEGRLDEAIK-FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             T+  LI   C+ G   RA D+++ M   GCTPN  +YN ++ G CK+ ++  A E L 
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
               R    D +TY  LL+   K  +   A+ +  ++   G +P +  Y T+I    +  
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K + + K   E    GL P   TY+S++ G  R+G +  A+K+F  +  +G  P+ ITY 
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +++ GLCK  + D A  F   MI K   P E T   L      +G +  A+ +L  L
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 7/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + + G +     ++  M  N  P +  T N ++   C+ G ++ A EV D    + 
Sbjct: 133 LISGYCKSGEIDNALQVLDRM--NVAPDVV-TYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++ A C+   V +A + L  M ++G+  D  T  +LI   C +G    + 
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG---RLD 246

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L  M   G +PNV TH +++  +C  G    A +L   ++R     P+V T+  +
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNIL 305

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C++  + RA  +LE+M   G  PN+ +Y  L++G CK    +RA + +D+M   GC
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN ++  LCK G+V  A E+L +   +      ITY  ++    K  +T++A+ 
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + GL PDI  Y++L++   R+ K+ E+ KFF +    G+ P   TY S++ G  
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +      A+ +   M    C P   TY  LI G+  +    EA      +  +G+
Sbjct: 486 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + +  ++L +M+ RG I D    T LI  FC     G  K+A  ++E + + G  P
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRI---GKTKKATWVMEILEQSGAVP 125

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+ VLI G CK G  + A ++  ++    N  P+V TY  ++   C   K+ +A  +
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+R  ++   P+  TYT LI   CK     +A  L+D M  +G  P++  YN +I+G+CK
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +GR+ EA + L        Q + IT+ I+L           A  L   M++ G +P +  
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   CRQ  +  +    ++    G  P   +Y  ++ G+ ++  +  A++Y   M 
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K+D A +    +  KG SP  +T  T+     K G + 
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            A+ +L+ + +K     I T ++L+  L  E +V  A  FFH L G
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 9/337 (2%)

Query: 306 LCKKGWTEKAFRLFLKLV-RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           L + G  E  F+    +V R D   P++   T++I G+C+  K  +A  ++E +++ G +
Sbjct: 67  LVRNGELEDGFKFLESMVYRGD--IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV 124

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY  LI G+CK G  + A  ++D M      P++  YN I+  LC  G++++A E+
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +  Q+E   D ITYTIL+    K++   QA+ L   M   G  PD+  Y  LI   C+
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + ++ E+ KF     + G  P   T+  ++      G    A K    M + GC+P  +T
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +  LI+ LC+Q  L  A    E M   G +P  ++   L + +CK+     A+  L+ + 
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 605 KKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +     I T NTL+  LC + +V +A    ++L  K
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 6/175 (3%)

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             R  ++++  KF +  +  G  P     TS+I G+ R G    A    + + Q G  PD
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            ITY  LISG CK  ++D A Q  + M    ++P  VT  T+    C  G    AM +L+
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 602 -SLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             L K+ +  + T   LI   C E  VG A     ++  K    D V+   L N 
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 66/272 (24%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++ +M   G      T N ++   C  GL+  A ++ ++M   G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
              ++ SY  ++  +C+  ++  A  +L  M+ RG   D  T   L+TA C  G      
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G  ++A +LL+EM RKG KP++ T++ L+ GL
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449

Query: 307 CKKGWTEKAFRLF----------------------------------LKLVRSDNYKPNV 332
            ++G  ++A + F                                  L  + S   KP  
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 509

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            TYT +I G   E     A  LL  +  +GL+
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +    K+ + M   G  PD I   +LI G C+  K  +A    E +   G  P  
Sbjct: 68  VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   L   YCK G+   A+ +L+ ++    + T NT++R LC   ++  A     + L 
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           K+   D ++   L  A C ES
Sbjct: 188 KECYPDVITYTILIEATCKES 208


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 196/375 (52%), Gaps = 4/375 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G    A ++   +  R    D   Y  ++   C+   V EA  + + M  RG   D 
Sbjct: 248 CKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDV 307

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI  FC     G +  AF LL EM  K   P+VYT+T+LID LCK+G  ++A  L
Sbjct: 308 ITYSTLICGFC---LAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNL 364

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++  +  KPNV TY+ ++ GYC   +++ A+ +   M +  + P+  +Y  +I G C
Sbjct: 365 -LGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K  + + A +L+  M  +   PN   YN++IDGLCK GR+  A +L+K+   R   AD I
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVI 483

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYT LL    K     +A+ LF +M + G+ P+ + YT LI   C+  ++K ++K FQ  
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G      TY  MI G  ++G +  A+    +M   GC PD +T+  +I  L ++ + 
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEN 603

Query: 559 DEACQFYESMIGKGI 573
           D+A +    MI KG+
Sbjct: 604 DKAEKLLHEMIAKGL 618



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 240/486 (49%), Gaps = 12/486 (2%)

Query: 182 NGLPLITST-----LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           NG+ L+ +T       +++G   ++     A  +  +M  +G+  D  +  +++  +C +
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G++  +   L  +L  G   +   LT L+   C    +G +K++    +++V +G++ N 
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLC---LKGEVKKSLHFHDKVVAQGFQMNQ 237

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            ++  L++GLCK G T  A +L L+++   + +P+V  Y  +I G CK++ +N A     
Sbjct: 238 VSYGTLLNGLCKIGETRCAIKL-LRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYT 296

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M  +G+ P+  TY++LI G C  G    A+ L++ M  +   P++Y Y  +ID LCK+G
Sbjct: 297 EMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +++EA  LL    +  ++ + +TY+ L+  +    E   A  +F  MV+  +NP + +Y 
Sbjct: 357 KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYN 416

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I   C+ K + E+    +E +   + P   TY S+I G  + G I+SA+   + ++  
Sbjct: 417 IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G   D ITY +L+ GLCK   LD+A   +  M  +GI P + T   L    CK      A
Sbjct: 477 GQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             + + +  K   + + T N +I  LC E  +  A     K+       D V+   +  +
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596

Query: 654 CYESNK 659
            +E ++
Sbjct: 597 LFEKDE 602



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G+L   FS++ EMT   +     T   ++   C+ G ++ A+ +   M   G
Sbjct: 313 LICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG 372

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  YC +G V  A +   AM+         +  ++I   C KG   S+ 
Sbjct: 373 VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC-KG--KSVD 429

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL EM+ K   PN  T+  LIDGLCK G    A  L +K +       +V TYT++
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL-MKELHHRGQPADVITYTSL 488

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK + +++A  L  +MKE+G+ PN  TYT+LI G CK    + A  L   +  +GC
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++Y YN +I GLCK+G + EA  +  K        D +T+ I++    ++ E  +A  
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEK 608

Query: 459 LFCRMVKAGL 468
           L   M+  GL
Sbjct: 609 LLHEMIAKGL 618



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 182/470 (38%), Gaps = 90/470 (19%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK----- 344
           KG  PN+ T ++LI+ L   G    +F +  K+++   Y+PN  T T ++ G  +     
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKL-GYQPNSITLTTLMKGETRCAIKL 63

Query: 345 ----EEKMNRAEMLLER-------------------------------------MKEQGL 363
               E++  R  M L                                        +  G+
Sbjct: 64  PRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGM 123

Query: 364 LPNTNTYTSLIYGH-----CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK---- 414
           L   NT + + +G       K+ +F  A  L   M  +G  P++   + +I+  C     
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183

Query: 415 -------------------------------KGRVQEAYELLKKAFQRELQADKITYTIL 443
                                          KG V+++     K   +  Q ++++Y  L
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           L+   K  ET+ A+ L   +      PD+  Y T+I   C+ K + E+  F+ E  + G+
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           FP   TY+++ICG+   G +  A      M      PD  TY  LI  LCK+ KL EA  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLC 620
               M  +G+ P  VT  TL   YC  G+   A  I  ++   +    + + N +I  LC
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
             K V  A     ++L K+   + V+  +L +   +S +     DL + +
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 24/503 (4%)

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ---------------CMVSSF 163
           FF WA     F+H            +++G    A+ V +                ++  F
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
            +  ++ +  +++ EM   G+     T   ++   CEL   + A ++F +M    V  DA
Sbjct: 63  CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SIKQAFE 282
             Y +++   C++ ++  A  +   M+  G + D  T T+L+ +     F+    +Q  +
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL----FKACKWEQGHQ 178

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EEM+ KG  P + T+  +++G CK G  ++A  L  +L +     P+   Y+ +I G 
Sbjct: 179 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL-KGTGRSPSGSLYSTLIDGL 237

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK ++ + A  L E     G + +   YTS I G CK G  + A  +   M + GC P+ 
Sbjct: 238 CKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
            +YN II  LCK  RV EA EL+ +A +R+        T+L+    K    ++A  +  R
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355

Query: 463 MVKAGLN-PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           M++ G   P +  Y+ +I   C+  ++ ++    Q+   AG  P   TYT++I  + + G
Sbjct: 356 MLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVG 415

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A + FQRM++ GCA D + Y  LI G C+ +K+DEA    E M G+GI P  V+  
Sbjct: 416 RLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLS 475

Query: 582 TLAYEYCKQGDSATAMIILESLD 604
           T+    CK+     A +++E ++
Sbjct: 476 TIVDGLCKESRVEEARLLMEKMN 498



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 220/475 (46%), Gaps = 11/475 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T T N ++ +    G    A  VF +        D  +Y  ++  +C+  ++ +A   L 
Sbjct: 17  TYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLG 76

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M   G      T   LI   C+  F     +A ++  +M+    KP+ + +TV+I  LC
Sbjct: 77  EMKAAGITPTIVTFGSLIRKLCELNF---TDKALQIFHQMIDMKVKPDAFLYTVVIGHLC 133

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K    + A   F ++V+S    P+  TYT ++    K  K  +   + E M  +G  P  
Sbjct: 134 KINKLDLAASYFERMVQS-GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY +++ G+CK G  ++A  LM  +   G +P+   Y+ +IDGLCK  R  EA EL + 
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A   ++Q D I YT  +S   K  +  +A  +  +M++AG  PD  +Y  +I + C+  +
Sbjct: 253 A-AGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 310

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC-APDNITYG 546
           + E+++   +A+     P     T ++ G  +   +  A    +RM + G  AP  +TY 
Sbjct: 311 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYS 370

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           A+I GLCK  +LD+A    + M   G  P  VT   +   +CK G    A  + + + ++
Sbjct: 371 AVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHER 430

Query: 607 ---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYES 657
              L +   N LIR  C   +V  A     ++ G+    + VSL+ + +  C ES
Sbjct: 431 GCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKES 485



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           R G++ N YT   L++     G   +A+R+F   + +  ++P+  TY  +I G+CK E++
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVT-LFRPDDFTYGTLIRGFCKAEQI 68

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A  LL  MK  G+ P   T+ SLI   C++   ++A  +   M      P+ + Y  +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I  LCK  ++  A    ++  Q     DK+TYT+L+    K  + +Q   +F  M+  G 
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +P++  Y T++  +C+  ++ ++    +     G  P+   Y+++I G  +      A +
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+     G   D I Y + ISGLCK  KLDEA   +  MI  G +P  V+   + Y  C
Sbjct: 249 LFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306

Query: 589 KQGDSATAMIILE-SLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           K    + A  +++ ++++K    +     L+  LC  +RV  A +   ++L
Sbjct: 307 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + G   N Y  N++++     G  +EAY + K       + D  TY  L+    K  + 
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            QA+ L   M  AG+ P I  + +LI   C      ++ + F + I   + P    YT +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I    +   +  A  YF+RM Q GC PD +TY  L+  L K  K ++  Q +E M+ KG 
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLD---KKLWIRTVNTLIRKLCSEKRVGMAAL 630
           SP  VT  T+   YCK G    A+ ++  L    +       +TLI  LC   R   A  
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 631 FFHKLLGKDQNV 642
            F    G  Q+V
Sbjct: 249 LFEMAAGDVQDV 260



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 5/238 (2%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +S   + G+L E  ++ ++M   G      + N ++   C+   V  A+E+ D+   R  
Sbjct: 267 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 326

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-IK 278
                   ++V   C+  RV EA   L  ML+ G   D A   +  +A  D   +   + 
Sbjct: 327 MPGVPVCTVLVDGLCKSRRVEEACVILERMLETG---DRAPSVVTYSAVIDGLCKADRLD 383

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ +L++M R G  P+V T+T +ID  CK G  ++A  LF ++        +V  Y  +
Sbjct: 384 DAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM-HERGCALDVVAYNIL 442

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           I GYC+  K++ A  ++E M  +G+ PN  + ++++ G CK    E A  LM+ M  E
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 34/204 (16%)

Query: 459 LFCRMVKA--GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           LF +  KA  G   + +   +L+  F      +E+ + F++ +     P   TY ++I G
Sbjct: 2   LFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + +   I  AV     M   G  P  +T+G+LI  LC+ +  D+A Q +  MI   + P 
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKP- 120

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
                                      D  L+      +I  LC   ++ +AA +F +++
Sbjct: 121 ---------------------------DAFLY----TVVIGHLCKINKLDLAASYFERMV 149

Query: 637 GKDQNVDRVSLAALKNACYESNKY 660
                 D+V+   L ++ +++ K+
Sbjct: 150 QSGCLPDKVTYTVLVHSLFKACKW 173


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 266/561 (47%), Gaps = 27/561 (4%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS- 161
           V A L ++A   VAL+FFYWA    ++ H   +Y      L      + A  V++ M   
Sbjct: 170 VCAVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRR 229

Query: 162 --------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                         S++  G+L+    ++  M   G+    S  N  + +  + G +E A
Sbjct: 230 GIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKA 289

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            +  + M   G+  D  +Y  ++  YC + R+ +A   ++ +  +G   D  +   ++  
Sbjct: 290 LKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 349

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWK----PNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            C +     I++   L+E+MV   W     P+  T+  LI  L K G  + A   FLK  
Sbjct: 350 LCKEK---KIEEVKCLMEKMV---WNSNLIPDQVTYNTLIHMLSKHGHADDAL-AFLKEA 402

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +   +  +   Y+A++  +C++ +M+ A+ L+  M  +G  P+  TYT+++ G C++G  
Sbjct: 403 QDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRI 462

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A  ++  M K GC PN  +Y A+++GLC  G+  EA E++  + +     + ITY  +
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAV 522

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    ++ +  +A  L   MV+ G  P       LI + C+ +K+ E++K+ +E +  G 
Sbjct: 523 MHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGC 582

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                 +T++I G+ + G++ +A+     M   G  PD +TY AL   L K+ +LDEA +
Sbjct: 583 AINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAE 642

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSE 622
               M+ KG+ P  VT  ++ + Y + G     + +LE + K+   RTV N +I KLC  
Sbjct: 643 LIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDF 702

Query: 623 KRVGMAALFFHKLLGKDQNVD 643
             +  A     K+L     VD
Sbjct: 703 GNLEEAEKLLGKVLRTASKVD 723



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 203/476 (42%), Gaps = 7/476 (1%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E A+ ++A L ++      +S+ Y  +GF      +         ++ N N         
Sbjct: 322 EDALELIAGLPSKGCPPDKVSY-YTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++   ++ G   +  + + E  + G  +     + +V   C+ G ++ A+ +  +M +R
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  +V  +CR+GR+ EA + L  M   G   +  + T L+   C  G     
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++   + EE     W PN  T+  ++ GL ++G   +A  L  ++V    + P       
Sbjct: 501 REMINVSEE---HWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEK-GFFPTPVEINL 556

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C+ +K+  A+  LE    +G   N   +T++I+G C++G+ E A  ++D M   G
Sbjct: 557 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSG 616

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   Y A+ D L KKGR+ EA EL+ K   + L    +TY  ++  + +       L
Sbjct: 617 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDML 676

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  +M+K    P    Y  +I   C    ++E+EK   + +         T   ++  Y
Sbjct: 677 NLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESY 734

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           L+ G   SA K   RM +    PD      +   L    KL EA       + +GI
Sbjct: 735 LKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 6/268 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L E   +  EM   G       +N ++   C+   V  A++  +E   +G   +  ++
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 589

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +C++G +  A   L  M   G   D  T T L  A    G +G + +A EL+ +
Sbjct: 590 TTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDAL---GKKGRLDEAAELIVK 646

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ KG  P   T+  +I    + G  +    L  K+++   ++     Y  +I   C   
Sbjct: 647 MLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRT---VYNQVIEKLCDFG 703

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  AE LL ++       + NT   L+  + K G    AY +   M +   TP++    
Sbjct: 704 NLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCE 763

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            +   L   G++ EA  L+ +  +R +Q
Sbjct: 764 KVSKKLVLDGKLVEADNLMLRFVERGIQ 791



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G+     A+  ++ ++ R  K++ + +       AG+ P+     + I   ++ G 
Sbjct: 226 MTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGK 285

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A+K+ +RM   G  PD +TY +LI G C  +++++A +    +  KG  P +V+  T
Sbjct: 286 LEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYT 345

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHKL 635
           +    CK+        ++E   K +W         T NTLI  L        A  F  + 
Sbjct: 346 VMGFLCKEKKIEEVKCLME---KMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 402

Query: 636 LGKDQNVDRVSLAAL 650
             K  ++D+V  +A+
Sbjct: 403 QDKGFHIDKVGYSAI 417


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 249/516 (48%), Gaps = 17/516 (3%)

Query: 131 HFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
           H+  +   CA S+I+             +V +  +  R+ +   ++ +M   G      T
Sbjct: 224 HYRDMQRNCAPSVIT----------YTILVDALCKSARISDASLILEDMIEAGCAPNVVT 273

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++   C+LG ++ A  +F++M       D  +Y +++  YC+  R  +  + L  M+
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   +  T   L+ +    G       AF L + M+R+  KP+ +T  ++ID  CK G
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSG---KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 390

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             + A+ LF +L+      P+++TY  MISG C+  +++ A  LLERM E G  P+  TY
Sbjct: 391 QLDLAYELF-QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S++ G CK    + AY++ +++   G   ++   + +IDGLCK  R+ +A +LL++  +
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                D + YTIL+    K  +  ++L  F  M+  G  P +  Y+ +I   C+  ++++
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
                +  +  G+ P    YTS+I G  +  +   A + ++ M Q GCAP  +TY  L+ 
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
            LCK S+LDEA    E M   G  P  VT  ++   + K  +   A  + +++  +    
Sbjct: 630 KLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689

Query: 611 T---VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           T    + L+ KL +E+++  A   + + L    +VD
Sbjct: 690 TPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 242/552 (43%), Gaps = 65/552 (11%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+ FF W  G   ++H                    +     C++S+F    + +E + +
Sbjct: 115 AVKFFDWCTGQPGYKH--------------------SKFTCNCLLSAFVRKKKAQEAYDL 154

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
                       + T + ++   C+    + A  + DEM  RG+    + Y  ++   C 
Sbjct: 155 FKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD 214

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
            GRV  A      M  R       T T+L+ A C       I  A  +LE+M+  G  PN
Sbjct: 215 NGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKS---ARISDASLILEDMIEAGCAPN 270

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V T+  LI+G CK G  ++A  LF +++  ++  P+V TY  +I GYCK+E+      LL
Sbjct: 271 VVTYNTLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCKQERPQDGAKLL 329

Query: 356 ERMKEQGLLPNTNTYTSL-----------------------------------IYGHCKV 380
           + M + G  PN  TY +L                                   I   CKV
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 389

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + AY+L  LM   GC P+IY YN +I G C+  R+ +A +LL++  +     D +TY
Sbjct: 390 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             ++S   K ++  +A  ++  +   G   D+   +TLI   C+ +++ ++EK  +E   
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G  P    YT +I G+ +   +  ++ +F  M   GC P  ITY  +I  LCK +++ +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW----IRTVNTLI 616
            C   ++M+ +G++P  +   ++    CK  DS      L  L K+      + T N L+
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCK-SDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628

Query: 617 RKLCSEKRVGMA 628
            KLC   R+  A
Sbjct: 629 DKLCKVSRLDEA 640



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 193/385 (50%), Gaps = 8/385 (2%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D+ T + LI  FC        +QA+ LL+EM ++G  P+   +  +I GLC  G  + A 
Sbjct: 166 DSITYSTLINGFCKAR---DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             +  + R  N  P+V TYT ++   CK  +++ A ++LE M E G  PN  TY +LI G
Sbjct: 223 VHYRDMQR--NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK+GN + A  L + M +  C+P+++ YN +IDG CK+ R Q+  +LL++  +   + +
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            ITY  L+   +K  +   A  L   M++    P    +  +I  FC+  ++  + + FQ
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                G  P   TY  MI G  R   I  A +  +RM + GC PD +TY +++SGLCK S
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 460

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---N 613
           ++DEA + YE +   G     VT  TL    CK      A  +L  +++      V    
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGK 638
            LI   C   ++  +  FF ++L K
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDK 545



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 147/326 (45%), Gaps = 4/326 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           +KA + F        YK +  T   ++S + +++K   A  L +  +     P++ TY++
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI G CK  +F++AY L+D M K G  P+   YN II GLC  GRV  A  +  +  QR 
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRN 231

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                ITYTIL+    K A    A  +   M++AG  P++  Y TLI  FC+   M E+ 
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F + +     P   TY  +I GY +        K  Q M + GC P+ ITY  L+  L
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K  K  +A    + M+ +   P   T   +   +CK G    A  + + +  +     I
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
            T N +I   C   R+  A     ++
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERM 437



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 4/320 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S      R+ +   ++  MT  G P    T N +V   C+   V+ A EV++ +   G
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +   ++   C+  R+ +A++ L  M   G+  D    T+LI  FC       + 
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD---QLD 533

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           ++     EM+ KG  P V T++++ID LCK         + LK +      P+   YT++
Sbjct: 534 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC-MLLKTMLERGVTPDAIVYTSV 592

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK +  + A  L + MK+ G  P   TY  L+   CKV   + A  L+++M  +GC
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGC 652

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN++ DG  K     +A+ L +    R        Y++LL++ + + +  QA+ 
Sbjct: 653 LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAME 712

Query: 459 LFCRMVKAGLNPDIHAYTTL 478
           ++   ++AG + D     TL
Sbjct: 713 IWEEALEAGADVDPEISRTL 732


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 234/473 (49%), Gaps = 10/473 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+F+EM   G+C D  ++  ++   CR G V E++R L+ +L RG   +  T+ + I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC    R  + +A  LL+  V +G  P+V T+  LI GLCK     +A     K+V ++
Sbjct: 260 GFCQ---RAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV-NE 314

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            Y+P+  TY ++I GYCK   M  A+ +L     +G +P+ +TY SLI G C+ G+ +RA
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            ++ +   ++G  PN+   N ++ GL ++G + +A +L+ +  +     D  TY ++++ 
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVING 434

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K      A  L    +  G  PD+  + TLI  +C++ K+  + +        G+ P 
Sbjct: 435 LCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY S++ G  + G     +  F+ M + GC P+ ITY  L    CK  K++EA    E
Sbjct: 495 VITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIE 554

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL----WIRTVNTLIRKLCSE 622
            M  KG++P  V   TL   +C  GD   A  + + +D++      I T N +I     +
Sbjct: 555 EMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGK 614

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             + MA   F+K+     + D  +   + +  C   N  + +S L  +I +G+
Sbjct: 615 LNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 215/430 (50%), Gaps = 9/430 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M N G      T N ++   C+LG+++ A+++  +   +G   D S+Y  ++   C+ G
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            +  A    +  +++G   +      L+     +G    I QA +L+ EM   G  P+++
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGL---ILQALKLMNEMSENGCSPDIW 426

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+ ++I+GLCK G    A  L +  + +  + P+V T+  +I GYCK+ K++ A  +++R
Sbjct: 427 TYNLVINGLCKIGCVSDADNLVIDAI-AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M   G+ P+  TY S++ G CK G +E       LM ++GC PNI  YN + +  CK  +
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYT 476
           V+EA  L+++   + L  D + +  L+       +   A  LF R+ +    +  I  Y 
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I AF  +  M  +EK F +    G  P   TY  MI G+ + GNI+S   +     + 
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P   T+G +++ LC + ++ EA      M+ KGI P EV  V   +E  K+ + A  
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP-EV--VNTIFEADKK-EVAAP 721

Query: 597 MIILESLDKK 606
            I++E+L KK
Sbjct: 722 KIVVENLMKK 731



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 256/584 (43%), Gaps = 53/584 (9%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ----- 157
           V A +  +   + AL  F        F+H +  Y      L  +G FE   EV+      
Sbjct: 10  VAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMN 69

Query: 158 -----------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                        + ++   G+++E   +   M          + N ++ I  E    + 
Sbjct: 70  IDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQ 129

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +V+  M  +G+  D  ++ + + ++CR  R   A R L+ M  +G          +I 
Sbjct: 130 AHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIG 189

Query: 267 AFCDKGFR--------------------------------GSIKQAFELLEEMVRKGWKP 294
            F ++  R                                G ++++  LL +++++G  P
Sbjct: 190 GFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP 249

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N++T  + I G C++    +A RL   + R     P+V TY  +I G CK  K+  AE  
Sbjct: 250 NLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG--LTPDVITYNTLICGLCKNFKVVEAEHY 307

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L +M  +G  P+  TY S+I G+CK+G  + A  ++     +G  P+   Y ++I+GLC+
Sbjct: 308 LRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQ 367

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G +  A  +  +A ++ L+ + +    L+    +Q    QAL L   M + G +PDI  
Sbjct: 368 DGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWT 427

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  +I   C+   + +++    +AI  G  P   T+ ++I GY +   + +A++   RM 
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G +PD ITY ++++GLCK  K ++    ++ M+ KG  P  +T   L   +CK     
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVE 547

Query: 595 TAMIILESL-DKKLWIRTVN--TLIRKLCSEKRVGMAALFFHKL 635
            A+ ++E + +K L    VN  TL++  C    +  A   F ++
Sbjct: 548 EALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRV 591



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 3/267 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +IG + +  ++VI+    G      T N ++   C+   ++ A E+ D M   G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++   C+ G+  +       M+++G + +  T  +L  +FC       ++
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKAR---KVE 547

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+EEM  KG  P+V     L+ G C  G  + A++LF ++     +   + TY  M
Sbjct: 548 EALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIM 607

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+ +  +  MN AE L  +M E G  P++ TY  +I G CK GN    Y  + +  ++G 
Sbjct: 608 INAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELL 425
            P++  +  +++ LC K RV EA  ++
Sbjct: 668 IPSLTTFGRVLNCLCLKRRVHEAVGII 694



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 111/232 (47%), Gaps = 2/232 (0%)

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           +KG++QEA ++ ++      +    +Y  +++  ++     QA  ++ RM   G+ PD++
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            +T  + +FCR  +   + +      + G   +   Y ++I G+  + +   A + F+ M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +G  PD + +  LI  LC++  + E+ +    ++ +G+SP   T       +C++   
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 594 ATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             A+ +L+ + + L   + T NTLI  LC   +V  A  +  K++ +    D
Sbjct: 268 NEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPD 319


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 210/403 (52%), Gaps = 5/403 (1%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           + EY   V+ ++   G+  D  +Y  M+ +YC+ G +T A R+   +L+ G   +  T  
Sbjct: 48  MTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCN 107

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+  +C     G +++A  L   M   G + N Y++T+LI GLC      KA  LFL +
Sbjct: 108 ALVLGYCRT---GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFL-M 163

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           ++ D   PNV  +T +ISG CK  ++  A +L + M + G++P+  TY ++I G+ K+G 
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A  + +LM K GC P+ + YN +I GLC + + +EA ELL  A +       +T+T 
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 282

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L++ +    +   AL +  +M+ +    D+  +  LI +  ++ ++KE+++   E    G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P   TYTS+I GY + G +  A++  + M + GC P+  TY +L+ GL K  KL +A 
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
                M   GI P  +T  TL    C + D   A  + E +++
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 239/567 (42%), Gaps = 94/567 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  ++++GR+ +   +   M  NG      T N ++   C+    E AEE+ +     G
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 272

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC   +  +A R  + M+     LD      LI +   K     +K
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD---RLK 329

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A ELL E+   G  PNV T+T +IDG CK G                     WT     
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 389

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   PNV TYT ++ G C E   + A  L E M++ GL
Sbjct: 390 YGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448

Query: 364 LPNTNTY--------------------------------TSLIYGHCKVGNFERAYDLMD 391
            P+ + Y                                T+LI G  K GN + A  L++
Sbjct: 449 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 508

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGCTP+ Y Y+ ++  LCK+ R+ EA  +L +   R ++     YTIL+ E L++ 
Sbjct: 509 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 568

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  ++  M  +G  P    YT  I ++C++ +++++E    +    G+ P   TY 
Sbjct: 569 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 628

Query: 512 SMI--CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----------------SGLC 553
            +I  CG++  G I  A    +RM    C P+  TY  L+                SG+ 
Sbjct: 629 ILIDGCGHM--GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 686

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI--RT 611
              +LD   Q  E M+  G++P   T  +L   +CK G    A ++L+ +  K       
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 746

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGK 638
           + TL+ K C + +    AL F  ++ +
Sbjct: 747 IYTLLIKCCCDTKFFEKALSFVSIMSE 773



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 218/489 (44%), Gaps = 46/489 (9%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           ++  +GL   T T N ++   C+ G +  A   F  +   G+  +  +   +V+ YCR G
Sbjct: 58  QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTG 117

Query: 238 RVTEADRWLSAMLD-RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
            + +A  WL  M+   G   +  + T+LI   CD      +++A  L   M R G  PNV
Sbjct: 118 ELRKA-CWLFLMMPLMGCQRNEYSYTILIQGLCDAK---CVRKALVLFLMMKRDGCSPNV 173

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN------- 349
              T LI GLCK G    A RL    +  +   P+V TY AMI GY K  +MN       
Sbjct: 174 RAFTFLISGLCKSGRVGDA-RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE 232

Query: 350 ---------------------------RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                                       AE LL    ++G  P   T+T+LI G+C    
Sbjct: 233 LMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 292

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F+ A  + + M    C  ++  +  +I+ L KK R++EA ELL +     L  + ITYT 
Sbjct: 293 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++  + K  +   AL +   M + G  P+   Y +L+    + KK+ ++     +    G
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TYT+++ G   + +  +A + F+ M Q G  PD   Y  L   LCK  + +EA 
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA- 471

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
             Y  ++ KG++  +V   TL   + K G++  A  ++E +  +       T + L+  L
Sbjct: 472 --YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 529

Query: 620 CSEKRVGMA 628
           C +KR+  A
Sbjct: 530 CKQKRLNEA 538



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 231/520 (44%), Gaps = 28/520 (5%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   +++S  +  RLKE   ++ E++ NGL     T   ++   C+ G V+ A EV   
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   +A +Y  ++    +  ++ +A   L+ M   G I +  T T L+   CD+  
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE-- 430

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                 AF L E M + G KP+ + + VL D LCK G  E+A+     +VR       V+
Sbjct: 431 -HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 486

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            YT +I G+ K    + A  L+ERM ++G  P++ TY+ L++  CK      A  ++D M
Sbjct: 487 -YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G    I+AY  +ID + ++G+   A  +  +      +    TYT+ ++ + K+   
Sbjct: 546 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 605

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  L  +M + G+ PD+  Y  LI        +  +    +  + A   P   TY  +
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CL 664

Query: 514 ICGYLRDGNISSA-----------------VKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +  +L  GN++                    +  +RM + G  P   TY +LI+G CK  
Sbjct: 665 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 724

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMI-ILESLDKKLWIRTVN 613
           +L+EAC   + M GKG+SP E     L    C  K  + A + + I+     +  + +  
Sbjct: 725 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 784

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            L+  LC+E         F  LL    N D V+   L + 
Sbjct: 785 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 824



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 184/425 (43%), Gaps = 52/425 (12%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           R    P  Y     +  L +   TE   R++ +LV+ D   P+  TY  MI  YCKE  +
Sbjct: 28  RLALSPKCYNFA--LRSLARFDMTEYMGRVYSQLVQ-DGLLPDTVTYNTMIKSYCKEGDL 84

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDLMG----------- 394
             A      + E GL P T T  +L+ G+C+ G   +A   + +M LMG           
Sbjct: 85  TTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 144

Query: 395 ---------------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
                                ++GC+PN+ A+  +I GLCK GRV +A  L     Q  +
Sbjct: 145 IQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGV 204

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
               +TY  ++  + K      AL +   M K G +PD   Y TLI   C QK  +E+E+
Sbjct: 205 VPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEE 263

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
               A+  G  PT  T+T++I GY        A++   +M    C  D   +G LI+ L 
Sbjct: 264 LLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLI 323

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-----KLW 608
           K+ +L EA +    +   G+ P  +T  ++   YCK G    A+ +L+ +++       W
Sbjct: 324 KKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAW 383

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV--SLAALKNACYE---SNKYALF 663
             T N+L+  L  +K++  A     K + KD  +  V      L+  C E    N + LF
Sbjct: 384 --TYNSLMYGLVKDKKLHKAMALLTK-MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440

Query: 664 SDLSQ 668
             + Q
Sbjct: 441 EMMEQ 445



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 186/419 (44%), Gaps = 29/419 (6%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           QC    F    RL   F M   M  NGL         +    C+ G    AEE +  +  
Sbjct: 427 QCDEHDFDNAFRL---FEM---MEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVR 477

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV      Y  ++  + + G    A   +  M+D G   D+ T ++L+ A C +     
Sbjct: 478 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK---R 534

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  +L++M  +G K  ++ +T+LID + ++G  + A R++ ++  S  +KP+  TYT
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYT 593

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+ YCKE ++  AE L+ +M+ +G+ P+  TY  LI G   +G  +RA+  +  M   
Sbjct: 594 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 653

Query: 397 GCTPNIYAYNAIIDGLCKKG----------------RVQEAYELLKKAFQRELQADKITY 440
            C PN + Y  ++  L K                   +   ++LL++  +  L     TY
Sbjct: 654 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 713

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + L++   K    ++A  L   M   GL+P+   YT LI   C  K  +++  F      
Sbjct: 714 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 773

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            G  P  E+Y  ++ G   +G+       F  + ++G   D + +  L  GL K   +D
Sbjct: 774 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 832



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 55/327 (16%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E   ++ +M+  G+         ++      G  ++A+ +++EM + G    A++Y 
Sbjct: 534 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 593

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           + + +YC+ GR+ +A+  +  M   G   D  T  +LI      G  G I +AF  L+ M
Sbjct: 594 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRM 650

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG------------WT----EKAFRLFLKLVRSDNYKPN 331
           V    +PN +T+ +L+  L K              W     +  ++L  ++V+     P 
Sbjct: 651 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH-GLNPT 709

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI----------------- 374
           V TY+++I+G+CK  ++  A +LL+ M  +GL PN + YT LI                 
Sbjct: 710 VTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVS 769

Query: 375 ------------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
                              G C  G+FE+   L   + + G   +  A+  + DGL K G
Sbjct: 770 IMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829

Query: 417 RVQEAYELLKKAFQRELQADKITYTIL 443
            V   +++L    +R       TY ++
Sbjct: 830 YVDICFQMLSIMEKRYCCISSQTYALV 856


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 221/435 (50%), Gaps = 16/435 (3%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  +  +  +++ ++C + RV  A   L+ +L  G   D A+ T LI   C   
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC--- 155

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A  L ++M+ +G++P+V  +  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 156 LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRL-LRSMEKGNCQPDV 214

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK+ +  +A  L   M  +G+ PN  T  SL+Y  C +G ++    L++ 
Sbjct: 215 VVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNE 274

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      PN  +   ++D LCK+G V +A++++   FQ  ++ D +TYT L+  H  ++E
Sbjct: 275 MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE 334

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ +F  MV  G  P++ +Y TLI  +C+ ++M ++   F+E     L P   TY +
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G    G +  A+  F+ M   G  PD +TY  L+  LCK   LD+A    +++ G  
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454

Query: 573 ISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEKRVG 626
           + P ++   T+  +  C+ G+   A  +  +L  K     +W  T N +   LC    + 
Sbjct: 455 LDP-DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVW--TYNIMTHGLCKRGLLD 511

Query: 627 MAALFFHKLLGKDQN 641
            A   F ++   D+N
Sbjct: 512 EATKLFMEM---DEN 523



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 215/473 (45%), Gaps = 42/473 (8%)

Query: 148 NFERAHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           +F   H V  +  +++SF  + R+   FS++ ++   G    T++   ++   C  G + 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A  +FD+M   G   D   Y  ++   C+ G  + A R L +M       D      LI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKG--------------------WK------------ 293
            + C    +    QAF L  EM+ KG                    WK            
Sbjct: 222 HSLCKDRQQ---TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 294 ---PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              PN  + T ++D LCK+G   +A  +   + +S   +P+V TYTA+I G+C   +M+ 
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQS-GVEPDVVTYTALIDGHCLRSEMDE 337

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  + + M  +G  PN  +Y +LI G+CK+   ++A  L + M ++   PN   YN +I 
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  GR+Q+A  L ++        D +TY ILL    K     +A+ L   +  + L+P
Sbjct: 398 GLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDP 457

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           DI  YT +I   CR  +++++   F    + GL P   TY  M  G  + G +  A K F
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             M++  C+ D  TY  +  G  + ++   A Q  E M+ +G S C+V+  TL
Sbjct: 518 MEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS-CDVSTTTL 569



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 7/340 (2%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV+T   +I+ +C   ++N A  +L ++ + G  P+T ++T+LI G C  G    A  L 
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M  EG  P++  Y  +I+GLCK G    A  LL+   +   Q D + Y  L+    K 
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +  QA  LF  M+  G++P+I    +L+ A C   + K       E + + + P   + 
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T+++    ++G ++ A      M Q G  PD +TY ALI G C +S++DEA + ++ M+ 
Sbjct: 288 TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGM 627
           KG +P   +  TL   YCK      AM + E +  +KL   TV  NTLI  LC   R+  
Sbjct: 348 KGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQD 407

Query: 628 AALFFHKLLGKDQNVD----RVSLAALKNACYESNKYALF 663
           A   F +++   Q  D    R+ L  L   C+     AL 
Sbjct: 408 AIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALL 447



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 182/392 (46%), Gaps = 51/392 (13%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F EM  +G+  +  +   +V A C +G     +  L+ M+D   + +  +LT ++ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C +G    + QA ++++ M + G +P+V T+T LIDG C +   ++A ++F  +V   
Sbjct: 293 ALCKEGM---VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK- 348

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PNV +Y  +I+GYCK E+M++A  L E M  Q L+PNT TY +LI+G C VG  + A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 387 YDL-------------------MDLMGK--------------EGCT--PNIYAYNAIIDG 411
             L                   +D + K              EG    P+I  Y  +IDG
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 468

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           +C+ G +++A +L      + L+ +  TY I+     K+    +A  LF  M +   + D
Sbjct: 469 MCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSAD 528

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY-- 529
              Y T+   F R  +   + +  +E +  G F    + T+++ G L D  +  +  +  
Sbjct: 529 GCTYNTITQGFLRNNETSRAIQLLEEMLARG-FSCDVSTTTLLVGMLSDDGLDQSEAHKL 587

Query: 530 --------FQRMNQIGCAPDNIT-YGALISGL 552
                    Q  + + C  D+I   G +IS L
Sbjct: 588 EDMFPHLRIQVKDTVFCKEDDINALGKVISDL 619



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 5/334 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +   +G  K   +++ EM ++ +     +L  VV   C+ G+V  A +V D M   G
Sbjct: 255 LVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSG 314

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  +C    + EA +    M+ +G   +  +   LI  +C       + 
Sbjct: 315 VEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE---RMD 371

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L EEM R+   PN  T+  LI GLC  G  + A  LF ++V      P++ TY  +
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI-PDLVTYRIL 430

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK   +++A  LL+ ++   L P+   YT +I G C+ G  E A DL   +  +G 
Sbjct: 431 LDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGL 490

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN++ YN +  GLCK+G + EA +L  +  +    AD  TY  +    L+  ET +A+ 
Sbjct: 491 KPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQ 550

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L   M+  G + D+ + TTL+        + +SE
Sbjct: 551 LLEEMLARGFSCDV-STTTLLVGMLSDDGLDQSE 583



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 3/197 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S++L       AL  F RM+     P I  +  ++ +  + K+        ++  + G+ 
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
               T   +I  +     ++ A     ++ ++GC PD  ++  LI GLC + ++ EA   
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           ++ MI +G  P  V   TL    CK G ++ A+ +L S++K   +  +    TLI  LC 
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 622 EKRVGMAALFFHKLLGK 638
           +++   A   F +++ K
Sbjct: 227 DRQQTQAFNLFSEMITK 243


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 238/486 (48%), Gaps = 18/486 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G +   F +V ++   G+       N ++   C+ G ++ AE +F+ M  +G
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ ++C+ G++  A  +L  M + G        + LI+  C     G ++
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK---LGKLR 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM+  G KPNV  +T LI G CK+G    AFRL+ ++       PN +T+TA+
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT-GKGISPNTYTFTAL 501

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C   +M  A  L   M E  ++PN  TY  LI GHCK GN  RA++L+D M ++G 
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQRELQ------ADKITYTILLSEHLKQ 450
            P+ Y Y  +I GLC  GRV EA E +   +  Q++L        + +TYT L++   K 
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621

Query: 451 AETKQALGLFCR-MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               +A  L CR M+ +   P+ + Y   +     +  ++++ +   + +  G      T
Sbjct: 622 GLMDKA-ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVT 679

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I G+ + G I  A +    M   G +PD I+Y  +I   C++  L EA + +ESM+
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 739

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVG 626
            +G++P  V    L Y  C  G+   A  + + + +   K    T N+LI   C    V 
Sbjct: 740 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVS 799

Query: 627 MAALFF 632
             A +F
Sbjct: 800 STADYF 805



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 225/477 (47%), Gaps = 61/477 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    ++   + G  M+ EM   G     + ++ +V    + G +  A ++ +++   G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           V      Y  ++ + C+ G++ EA+   + M  +G   ++ T ++LI +FC +G      
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 273 --------------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G ++ A  L +EM+  G KPNV  +T LI G 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK+G    AFRL+ ++       PN +T+TA+ISG C   +M  A  L   M E  ++PN
Sbjct: 471 CKEGELHNAFRLYHEMT-GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY  LI GHCK GN  RA++L+D M ++G  P+ Y Y  +I GLC  GRV EA E   
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE--- 586

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
             F  +LQ ++        + L + E              G  P++  YT LI   C+  
Sbjct: 587 --FMNDLQGEQ--------QKLNEIE--------------GCLPNVVTYTALINGLCKIG 622

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            M ++E   +E + +   P + TY   +     +GNI  A++    + + G   + +TY 
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYN 681

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            LI G CK  ++ EA +   +MI  GISP  ++  T+ YEYC++GD   A+ + ES+
Sbjct: 682 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 218/442 (49%), Gaps = 13/442 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++S  + G+L E  S+   M + GL     T + ++   C+ G ++ A     +M
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+ A    Y  ++  +C++G++  A      M+  G   +    T LI+ +C +G  
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG-- 474

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  AF L  EM  KG  PN YT T LI GLC      +A +LF ++V   N  PN  T
Sbjct: 475 -ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEW-NVIPNEVT 532

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLM 393
           Y  +I G+CKE    RA  LL+ M E+GL+P+T TY  LI G C  G    A + M DL 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 394 GK-------EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           G+       EGC PN+  Y A+I+GLCK G + +A  L ++        ++ TY   L  
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
              +   ++A+ L   +++ G   +   Y  LI  FC+  +++E+ +     I +G+ P 
Sbjct: 653 LTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y+++I  Y R G++  A+K ++ M   G  PD + Y  LI G C   +L +A +  +
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 771

Query: 567 SMIGKGISPCEVTRVTLAYEYC 588
            M+ +G+ P   T  +L +  C
Sbjct: 772 DMMRRGVKPNRATYNSLIHGTC 793



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 42/490 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ +  R  +G  +V  M + G+     TL+ V+     +     A  +FDE+ + G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  +V + C +                                  K F     
Sbjct: 211 LRPDVYVYTAVVRSLCEL----------------------------------KDF----I 232

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E++  M   G   +V T+ V I GLCK     +A  +   L+     + +V TY  +
Sbjct: 233 RAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTL 291

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK E+    E ++  M E G +P+    ++L+ G  K GN   A+DL++ + K G 
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ YNA+I+ +CK G++ EA  L      + L  + +TY+IL+    K+ +   AL 
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              +M + G+   ++ Y++LI+  C+  K++ ++  F E I  GL P    YTS+I GY 
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G + +A + +  M   G +P+  T+ ALISGLC  +++ EA + +  M+   + P EV
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L   +CK+G++  A  +L+ + +K  +    T   LI  LCS  RV  A  F + L
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 636 LGKDQNVDRV 645
            G+ Q ++ +
Sbjct: 592 QGEQQKLNEI 601



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P + T + +++G  +  +   A  L + +   GL P+   YT+++   C++ +F RA ++
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M   GC  ++  YN  I GLCK  RV EA E+           + ++Y         
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI----------KNLLSY--------- 278

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                            GL  D+  Y TL+   C+ ++ +  E+   E I  G  P++  
Sbjct: 279 ----------------KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            ++++ G  + GNI SA     ++ + G AP    Y ALI+ +CK  KLDEA   + +M 
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVG 626
            KG+ P +VT   L   +CK+G    A+  L  + +   K  +   ++LI   C   ++ 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            A   F +++      + V   +L +  C E   +  F    +   +GI
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 10/496 (2%)

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
           S F  I      F+ +I M  + LP +    N ++G   ++     A  +  +M  RG+ 
Sbjct: 54  SGFDAIDDAVALFTRLITM--HPLPSVVE-FNMILGSIVKMKHYPTAISLSKQMGLRGIT 110

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
               +  +++  YC +G +  A   L  +L RG  L+  TLT ++   C     G +++A
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLC---INGEVRKA 167

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            E  + +V +G+  +  T+  LI+GLCK G T +AF L  K+      +PNV  Y  ++ 
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM-EGQVVRPNVVIYNMIVD 226

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G CK+  +  A  L   +  +G+ P+  TYT LI+G C +G +     L+  M       
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+Y YN +ID LCKKG + +A+++     +R  + D +T+  L+S +    +  +A  LF
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
               + G+ PD+ +Y  LI  +C+  ++ E+   F +     L P   TY+S+I G  + 
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G IS A + F  ++  G +P+ ITY  ++  LCK   +D+A + +  M  +G++P   + 
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L   YCK      AM + E + ++  +    T N LI  LC   R+  A   F+ +  
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526

Query: 638 KDQNVDRVSLAALKNA 653
               VD ++   L +A
Sbjct: 527 GGPPVDVITYNILFDA 542



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 187/388 (48%), Gaps = 4/388 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +++       +   G  L   T   ++   C++GL   A E+  +M  + V  +   Y
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            ++V   C+ G VTEA    S ++ RG   D  T T LI  FC     G  ++   LL +
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCG---LGQWREVTRLLCD 278

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +    NVYT+ +LID LCKKG   KA  +   L+     +P++ T+  ++SGYC   
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDM-RNLMIERGQRPDLVTFNTLMSGYCLYN 337

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  L +   E G+ P+  +Y  LI G+CK    + A  L + M  +   PNI  Y+
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYS 397

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLCK GR+  A+EL           + ITY I+L    K     +A+ LF  M + 
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER 457

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL P++ +Y  LI  +C+ K++ E+   F+E     L P   TY  +I G  + G IS A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCK 554
            + F  M+  G   D ITY  L     K
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 205/431 (47%), Gaps = 5/431 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +  +G +   FS++  +   G  L   TL  ++   C  G V  A E  D + 
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  +Y  ++   C++G   EA   L  M  +    +     +++   C  G   
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL-- 233

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A +L  ++V +G  P+V+T+T LI G C  G   +  RL   +V   N   NV+TY
Sbjct: 234 -VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV-DRNVNLNVYTY 291

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CK+  + +A  +   M E+G  P+  T+ +L+ G+C   +   A  L D   +
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G TP++++YN +I G CK  R+ EA  L  K   ++L  + +TY+ L+    K      
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  LF  +   G +P++  Y  ++ A C+ + + ++ + F      GL P   +Y  +I 
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           GY +   I  A+  F+ M++    PD++TY  LI GLCK  ++  A + +  M   G  P
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG-PP 530

Query: 576 CEVTRVTLAYE 586
            +V    + ++
Sbjct: 531 VDVITYNILFD 541



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 45/364 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +IG  +E F ++ +M    +       N +V   C+ GLV  A +++ ++  RG
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248

Query: 219 VCADA-----------------------------------SSYKLMVVAYCRMGRVTEAD 243
           +  D                                     +Y +++ A C+ G + +A 
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAH 308

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
              + M++RG   D  T   L++ +C       + +A +L +     G  P+V+++ +LI
Sbjct: 309 DMRNLMIERGQRPDLVTFNTLMSGYC---LYNDVVEARKLFDTFAECGITPDVWSYNILI 365

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYK---PNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            G CK    ++A  LF K+    NYK   PN+ TY+++I G CK  +++ A  L   + +
Sbjct: 366 IGYCKNNRIDEALSLFNKM----NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G  PN  TY  ++   CK+   ++A +L +LM + G TPN+ +YN +I+G CK  R+ E
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDE 481

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  L ++  +R L  D +TY  L+    K      A  LF  M   G   D+  Y  L  
Sbjct: 482 AMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFD 541

Query: 481 AFCR 484
           AF +
Sbjct: 542 AFSK 545



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 156/398 (39%), Gaps = 50/398 (12%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           F +FL+   SD+ K N        SG+   + ++ A  L  R+     LP+   +  ++ 
Sbjct: 35  FSVFLRFF-SDSQKQNAKKK----SGF---DAIDDAVALFTRLITMHPLPSVVEFNMILG 86

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
              K+ ++  A  L   MG  G TP+I   + +I+  C  G +  A+ +L    +R  Q 
Sbjct: 87  SIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQL 146

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           + IT T ++       E ++AL     +V  G   D   Y TLI   C+    +E+ +  
Sbjct: 147 NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELL 206

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG---- 551
            +     + P    Y  ++ G  +DG ++ A   +  +   G  PD  TY  LI G    
Sbjct: 207 HKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL 266

Query: 552 -------------------------------LCKQSKLDEACQFYESMIGKGISPCEVTR 580
                                          LCK+  L +A      MI +G  P  VT 
Sbjct: 267 GQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326

Query: 581 VTLAYEYCKQGDSATAMIILES-----LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            TL   YC   D   A  + ++     +   +W  + N LI   C   R+  A   F+K+
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVW--SYNILIIGYCKNNRIDEALSLFNKM 384

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
             K    + V+ ++L +   +S + +   +L   I +G
Sbjct: 385 NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDG 422



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   ++ A  +F++M  + +  +  +Y  ++   C+ GR++ A    SA+ D G   + 
Sbjct: 369 CKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNV 428

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  +++ A C       + +A EL   M  +G  PNV ++ +LI+G CK    ++A  L
Sbjct: 429 ITYNIMLDALCKIQL---VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNL 485

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R  N  P+  TY  +I G CK  +++ A  L   M + G   +  TY  L     
Sbjct: 486 FEEMHRR-NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFS 544

Query: 379 KV 380
           K+
Sbjct: 545 KI 546


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 233/454 (51%), Gaps = 24/454 (5%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFA--------------EIGRLKEGFSMVIEMTNNGLPL 186
           + L  +G  E+A E  + M  S +              E GR+ +     +E+    +  
Sbjct: 313 SGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
            + T + V+   C+ G V+ A  + + M  RG C D +++ +++   C+  ++ EA  +L
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432

Query: 247 SAMLDRGAILDNATLTL---LITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTHTVL 302
             M DR     +++      L+ + C       + QAF +   MV  + + P+V ++++L
Sbjct: 433 QGM-DRKISSRSSSCFSYNSLLNSLCKAK---KVHQAFAIFSTMVSERSFVPDVVSYSIL 488

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG CK     +A +L+ +++   N  PNV TY A ++G  ++ ++  A+ + E M   G
Sbjct: 489 IDGFCKIDELGRAEKLYKQMI-DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY++LI+G       ++A++L + M   GC PN   YN ++ GLCK+ +  EA+
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           EL +K  +R    D++TYT LL       + +QA+ +F  MV  G +PD+ AY  L+  F
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI-GCAPD 541
            R  K  E+++ FQ  ++    P   ++  MI G  +   +  AV+ F+RM Q  GC+PD
Sbjct: 668 FRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 727

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +TY +LI GLC + +L EA + ++ +    +SP
Sbjct: 728 LVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 227/449 (50%), Gaps = 7/449 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +S   + G++++ F     M  + L       + ++ +  E G ++ AEE   E+  R +
Sbjct: 312 LSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              + +   ++   C+ GRV  A   L  M+ RG   D AT ++LI   C       I++
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD---KIQE 427

Query: 280 AFELLEEMVRK--GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           A E L+ M RK      + +++  L++ LCK     +AF +F  +V   ++ P+V +Y+ 
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+CK +++ RAE L ++M +   +PN  TY + + G  + G    A  + + M   G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+P++  Y+ +I G     +  +A+EL +    R  + + +TY  LL    K+++  +A 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF +MV+ G +PD   YTTL+  FC   K++++ + F E ++ G  P    Y  ++ G+
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM-IGKGISPC 576
            R G    A + FQ M    C PD +++  +I GL K  +LD+A + +E M    G SP 
Sbjct: 668 FRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 727

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDK 605
            VT  +L +  C +   + AM + + +D+
Sbjct: 728 LVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/591 (25%), Positives = 257/591 (43%), Gaps = 78/591 (13%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL+FF W +    F+H +  Y      LI + + ++A +V + MV+     G +  GF+ 
Sbjct: 113 ALTFFRW-LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ----GVVPNGFTY 167

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            +                +V  +C     + A   F EM  +G    ++ Y+ +      
Sbjct: 168 AV----------------LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKA 211

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKGFRGSIKQAFELLEEMVRKGWK 293
            G+  E  R     L++   ++      L+  F   DK    S     +L   MV+ G K
Sbjct: 212 TGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS-----KLFRAMVKSGCK 266

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-- 351
           P+   ++ ++   CK    ++AF+LFL++        N   +TA +SG CK  K+ +A  
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326

Query: 352 ----------------EMLLERMKEQGLL----------------PNTNTYTSLIYGHCK 379
                           +ML+  + E G +                P++ T  S+I   CK
Sbjct: 327 ACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCK 386

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL---QAD 436
            G  + A  L++ M K G  P++  ++ +I+ LCK  ++QEA E L +   R++    + 
Sbjct: 387 AGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL-QGMDRKISSRSSS 445

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
             +Y  LL+   K  +  QA  +F  MV +    PD+ +Y+ LI  FC+  ++  +EK +
Sbjct: 446 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++ I     P   TY + + G +R G I+ A   ++ M   GC+PD ITY  LI G    
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----- 610
            K D+A + +E+MI +G  P  VT   L +  CK+     A      L +K+  R     
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA----HELFRKMVERGCDPD 621

Query: 611 --TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
             T  TL+   C+  ++  A   F +++ K  + D V+   L    + + K
Sbjct: 622 RVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 8/281 (2%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           E+GR ++ +  +I++  N +P +T T N  +      G +  A+ V++EM A G   D  
Sbjct: 497 ELGRAEKLYKQMIDL--NCVPNVT-TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++  +    +  +A      M+ RG   +  T   L+   C +       +A EL 
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKES---KPDEAHELF 610

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +MV +G  P+  T+T L+ G C  G  E+A  +F ++V S  + P+V  Y  ++ G+ +
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV-SKGHDPDVVAYNCLLKGFFR 669

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIY 403
             K   A+ L + M  +   P+T ++  +I G  K    + A ++ + M ++ GC+P++ 
Sbjct: 670 AGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 729

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            YN++I GLC + R+ EA ++ K+  + +L  D   + +LL
Sbjct: 730 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/519 (20%), Positives = 188/519 (36%), Gaps = 149/519 (28%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A      +  + +K +V+T+  L+D L +    ++A ++F K+V +    PN  TY  +
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMV-AQGVVPNGFTYAVL 170

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY---TSLIYGHCKVGNFERAY-------- 387
           +   C E   + A      M ++G  P++  Y   T  +    K G F R +        
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 388 ------------------------DLMDLMGKEGCTPN--IYAY---------------- 405
                                    L   M K GC P+  IY+Y                
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 406 ------------------NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL---- 443
                              A + GLCK G++++A+E   +  Q  L + +  Y +L    
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC-RTMQESLSSSQPVYDMLIRLL 349

Query: 444 -------------------------------LSEHLKQAETKQALGLFCRMVKAGLNPDI 472
                                          + E  K      AL L   M+K G  PD+
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQE--------------------------------AIT 500
             ++ LI   C+  K++E+++F Q                                 AI 
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 501 AGL------FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           + +       P   +Y+ +I G+ +   +  A K +++M  + C P+  TY A ++GL +
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRT 611
           + ++ +A   YE M+  G SP  +T  TL + +        A  + E++     +    T
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVT 589

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            N L+  LC E +   A   F K++ +  + DRV+   L
Sbjct: 590 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 54/244 (22%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           GK  C   +    A+I  L   G   EA    +    R  + D  TY  LL + ++  + 
Sbjct: 92  GKSSCRETV---GAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDL 145

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY--- 510
           KQA  +F +MV  G+ P+   Y  L+ + C ++   E+ +FF E +  G  P+   Y   
Sbjct: 146 KQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV 205

Query: 511 TSMICGYLRDGNIS--------------------------------SAVKYFQRMNQIGC 538
           T  +    ++G  S                                 A K F+ M + GC
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGC 265

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-------------CEVTRVTLAY 585
            PD   Y  ++   CK   LDEA + +  M  +  +P             C+  ++  A+
Sbjct: 266 KPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAF 325

Query: 586 EYCK 589
           E C+
Sbjct: 326 EACR 329


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 278/577 (48%), Gaps = 55/577 (9%)

Query: 113 SMVALSFFYWAIGF--AKFRHFMRLYIVCAT---SLISNGNFERAHEVMQCMVSSFAEIG 167
           SM A S F  A G      R +    +V A+   +L  +G+  R+  V+  +V ++ + G
Sbjct: 4   SMCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGH--RSPAVLDVLVDTYKKSG 61

Query: 168 RLKEGFSMVIEMTNNGL-PLI----------------------------------TSTLN 192
           R+++   +V+ M + GL P I                                    T +
Sbjct: 62  RVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYS 121

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            ++   C++   + A++V  EM  RG   +  +Y +++   CR G V EA  +   M D 
Sbjct: 122 TLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 181

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G + D  T   LI   C K  R +  +A  LL+EM     KPNV  +  LIDG  ++G  
Sbjct: 182 GLVPDGFTYGALINGLC-KSRRSN--EAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++AF++  ++V +   +PN  TY  ++ G CK  +M+RA +LL++M      P+T TY  
Sbjct: 239 DEAFKMIKEMVAA-GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I GH +  N + A+ L+  M   G +PN+Y Y+ +I GLC+ G  ++A +LL++   + 
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L+ +   Y  L+S + ++     A  +F +M K  + PD++ Y +LI    +  +++ES 
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K+F +    GL P + TY+ +I GYL++G++ SA +  QRM   G  P+++ Y  L+   
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            K   +++    ++SM+ +G+         L +     G+   A  +L  ++K   +  V
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537

Query: 613 N---TLIRKLCS----EKRVGMAALFFHKLLGKDQNV 642
           +   +LI  LC     EK  G+      K  G D N+
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKK--GVDPNI 572



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 237/520 (45%), Gaps = 10/520 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G   E F M+ EM   G+     T + +V   C++G ++ A  +  +M    
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y L++  + R     +A R LS M + G   +  T +++I   C  G     +
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG---EPE 344

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LLEEM  KG KPN + +  LI G C++G    A  +F K+ +  N  P+++ Y ++
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSL 403

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K  ++  +     +M+E+GLLPN  TY+ LI+G+ K G+ E A  L+  M   G 
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +++   K   +++     K    + +  D   Y IL+         + A  
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   + K G  PD+H Y++LI+  C+    +++     E    G+ P    Y ++I G  
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+IS A   F  +   G  P+ +TY +LI G CK   +  A   Y  M+  GI+P   
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 579 TRVTLAYEYCKQGDSATAMIILES--LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               L       GD   AM ++E   L     I + N L+   C   ++       H ++
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM 703

Query: 637 GKDQNVDRVSLAALKNACYESNK----YALFSDLSQRIAE 672
           G+    + +++  + +   E+ K    + +F +L Q+ +E
Sbjct: 704 GRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 743



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 242/534 (45%), Gaps = 42/534 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++        +++EM   G  L T T N ++   C  G VE A     +M   G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y  ++   C+  R  EA     A+LD  +  +     ++     D   R G+ 
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEA----KALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------------ 325
            +AF++++EMV  G +PN  T+  L+ GLCK G  ++A  L  ++VR             
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 326 -----------DNYK-----------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                      D ++           PNV+TY+ MI G C+  +  +A  LLE M  +GL
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   Y  LI G+C+ GN   A ++ D M K    P++Y YN++I GL K GRV+E+ +
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
              +  +R L  ++ TY+ L+  +LK  + + A  L  RM+  GL P+   Y  L+ ++ 
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   +++    F+  +  G+      Y  +I      GN+ +A +    + + G  PD  
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            Y +LISGLCK +  ++A    + M  KG+ P  V    L    CK GD + A  +  S+
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 604 DKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             K  +    T  +LI   C    +  A   ++++L      D    + L   C
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 224/532 (42%), Gaps = 60/532 (11%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           FRH  +       S + N            M+    + G  ++   ++ EMT  GL    
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                ++   C  G V  A E+FD+M    V  D   Y  ++    ++GRV E+ ++ + 
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M +RG + +  T + LI  +   G    ++ A +L++ M+  G KPN   +  L++   K
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNG---DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 479

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               EK    F  ++       N   Y  +I        M  A  +L  +++ G +P+ +
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDN-RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+SLI G CK  + E+A+ ++D M K+G  PNI  YNA+IDGLCK G +  A  +    
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD----------------- 471
             + L  + +TYT L+    K  +   A  L+  M+  G+ PD                 
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 658

Query: 472 -----------------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
                            I ++  L+  FC++ KM+E+ K     +  GL P   T  ++I
Sbjct: 659 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 718

Query: 515 CGYLRDGNIS---------------SAVKYFQRM-----NQIGCAPDNITYGALISGLCK 554
            G    G +S               SA ++F  +     NQ G  P ++    +I   CK
Sbjct: 719 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ-GKIPLDVV-DDMIRDHCK 776

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           +  LD+A    + ++ K       + + +    C++G  + A+ +L+ +DK+
Sbjct: 777 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 145/356 (40%), Gaps = 57/356 (16%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E     F  M  +GV  D   Y +++      G +  A R LS +   G++ D    + 
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI+  C    R   ++AF +L+EM +KG  PN+  +  LIDGLCK G    A  +F  ++
Sbjct: 543 LISGLCKTADR---EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 599

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT---------------- 367
            +    PN  TYT++I G CK   ++ A  L   M   G+ P+                 
Sbjct: 600 -AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 658

Query: 368 ------------------NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
                             +++ +L+ G CK G  +    L+ ++   G  PN      II
Sbjct: 659 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 718

Query: 410 DGLCKKGRVQEAY----ELLKKA-----------FQRELQADKITYTI---LLSEHLKQA 451
            GL + G++ E +    EL +K            F   +   KI   +   ++ +H K+ 
Sbjct: 719 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEG 778

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPT 506
              +AL L   +V         +Y  ++   CR+ K+ E+    +E    G L PT
Sbjct: 779 NLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPT 834



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 18/280 (6%)

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR--- 462
           + ++D   K GRVQ+A E++     R L         LL + L+      A+ L  +   
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA----DAMALLWKVRE 106

Query: 463 -MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            MV AG++PD++ Y+TLI A+C+ ++   ++K   E    G      TY  +I G  R G
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A  + + M   G  PD  TYGALI+GLCK  + +EA    + M    + P  V   
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226

Query: 582 TLAYEYCKQGDSATAMIILESL------DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            L   + ++G++  A  +++ +        K+   T + L+R LC   ++  A+L   ++
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKI---TYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 636 LGKDQNVDRVSLAALKNACY-ESNKYALFSDLSQRIAEGI 674
           +      D ++   +    +   NK   F  LS+    GI
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 223/446 (50%), Gaps = 7/446 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V Q ++ + ++  R+ E   ++ EM   G      T N V+   C L  +    ++ D M
Sbjct: 245 VYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRM 304

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   +  +Y +++   CR+G+V EA      +L++    ++   T+LI  +   G R
Sbjct: 305 LFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSG-R 359

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
                AF L ++M++ G +P+V+T   LI GLCKKG    A  + +  + ++   PN+ T
Sbjct: 360 LDEANAF-LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM-VNDMSANGCTPNLIT 417

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++ G+CK+ ++  A  +L  M  +G   N   Y  L+   CK G   +A D++  M 
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P+I+ +N +I GLCK  R ++A  L +      + A+ +TY  L+   L+    +
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M+  G   D   Y  LI AFC+    +++   F E +   L P+  +   +I
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R G + +A++  + M   G APD +TY +LI+GLCK   + EA   +  +  +GI 
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQ 657

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL 600
           P  +T  TL   +C+ G    A ++L
Sbjct: 658 PDAITYNTLICWHCRAGMFDDAYLLL 683



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 234/522 (44%), Gaps = 50/522 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+ I         A  VF EM ++GV     ++ +++ A C +  V  A   L  M  
Sbjct: 177 NVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTK 236

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE------------------------- 286
            G + ++     LI A      R  + +A +LLEE                         
Sbjct: 237 HGCVPNSVVYQTLIHALSK---RDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 287 ----------MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
                     M+ +G+ PN  T+ VL++GLC+ G  ++A  L  K+       PN   +T
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP-----TPNDVHFT 348

Query: 337 AMISGYCKEEKMNRAEMLL-ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            +I+GY K  +++ A   L ++M + G  P+  T+ +LI+G CK G    A D+++ M  
Sbjct: 349 ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA 408

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GCTPN+  Y  ++DG CKK +++EA  +L +   +  + + + Y +LL    K  +  +
Sbjct: 409 NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK 468

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +   M   G  PDI  + TLI   C+  + +++   +++ +  G+     TY ++I 
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIH 528

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +LR G I  A+K    M   GC  D ITY  LI   CK    ++A   ++ M+ K + P
Sbjct: 529 AFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP 588

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
             ++   L    C+ G    A+ +L  +  +     + T N+LI  LC    +  A   F
Sbjct: 589 SNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLF 648

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
           +KL  +    D ++   L   C+   +  +F D    +  G+
Sbjct: 649 NKLQAEGIQPDAITYNTL--ICWHC-RAGMFDDAYLLLLRGV 687



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 9/348 (2%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +P   ++ V++D L        A  +F +++ S    P V+T+  ++   C   +++ A 
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEML-SKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            LL  M + G +PN+  Y +LI+   K      A  L++ M   GC P++  +N +I GL
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C+  R+ E  +L+ +   R    + ITY +L++   +  +  +A  L  ++       D+
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN---DV 345

Query: 473 HAYTTLIAAFCRQKKMKESEKF-FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           H +T LI  + +  ++ E+  F + + I  G  P   T+ ++I G  + G + SAV    
Sbjct: 346 H-FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M+  GC P+ ITY  L+ G CK+++L+EA      M  KG     +    L    CK G
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 592 DSATAMIIL-ESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               A+ +L E  DK  K  I T NTLI  LC   R   A   +  +L
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 8/319 (2%)

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A R+ L +      +P   +Y  ++         + A  +   M  +G++P   T+  +
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           +   C V   + A  L+  M K GC PN   Y  +I  L K+ RV EA +LL++ F    
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D  T+  ++    +     +   L  RM+  G  P+   Y  L+   CR  K+ E++ 
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY-FQRMNQIGCAPDNITYGALISGL 552
              +  T    P    +T +I GY++ G +  A  + + +M + GC PD  T+  LI GL
Sbjct: 335 LLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGL 390

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           CK+  +  A      M   G +P  +T  TL   +CK+     A  +L  +  K   L I
Sbjct: 391 CKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNI 450

Query: 610 RTVNTLIRKLCSEKRVGMA 628
              N L+R LC   +V  A
Sbjct: 451 MGYNVLLRALCKNGKVPKA 469



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 136/307 (44%), Gaps = 21/307 (6%)

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI--YGHCKV-GNFERAYDLM 390
            Y  +I      ++    + LL ++KE+G+    + +  ++  YG   + G   R   L+
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRM--LL 161

Query: 391 DLMGKEGCTPNIYAYNAIIDGL----CKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           D+ G   C P   +YN ++D L    C        YE+L K     +     T+ +++  
Sbjct: 162 DMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVY----TFGVVMKA 217

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
                E   A  L   M K G  P+   Y TLI A  ++ ++ E+ K  +E    G  P 
Sbjct: 218 LCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
            +T+  +I G  R   I    K   RM   G  P++ITYG L++GLC+  K+DEA    +
Sbjct: 278 VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----Q 333

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK--KLWIRTVNTLIRKLCSE 622
            ++ K  +P +V    L   Y K G  D A A +  + +    +  + T NTLI  LC +
Sbjct: 334 VLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393

Query: 623 KRVGMAA 629
             +G A 
Sbjct: 394 GLMGSAV 400


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 214/422 (50%), Gaps = 17/422 (4%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A+ +F EM  +G+  D  +Y  M+V +C  GR ++A++ L  ML+R 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T   LI AF  +G      +A EL +EM+ +G  PN  T+  +IDG CK+   +
Sbjct: 321 ISPDVVTYNALINAFVKEG---KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  +F  L+ +    P+V T+T +I GYC  ++++    LL  M  +GL+ NT TY +L
Sbjct: 378 AAEDMFY-LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE- 432
           I+G C VG+   A DL   M   G  P+I   N ++DGLC  G++++A E+ K A Q+  
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSK 495

Query: 433 -----------LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                      ++ D +TY IL+   + + +  +A  L+  M   G+ PD   Y+++I  
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+Q ++ E+ + F    +    P   T+ ++I GY + G +   ++ F  M + G   D
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            I Y  LI G  K   ++ A   ++ MI  G+ P  +T   +   +  + +   A+ +LE
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675

Query: 602 SL 603
            L
Sbjct: 676 DL 677



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 217/479 (45%), Gaps = 49/479 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    +L    S   ++T  GL     T   ++   C    V  A + F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++   CR GR+ EA   L  M++ G      T   ++   C KG   S  
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                +EE+      PNV  ++ +ID LCK G    A  LF ++     + P++ TY +M
Sbjct: 240 NLLRKMEEVSH--IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSM 296

Query: 339 ISGYCKEEKMNRAEMLLERMKE-----------------------------------QGL 363
           I G+C   + + AE LL+ M E                                   +G+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +PNT TY S+I G CK    + A D+  LM  +GC+P+++ +  +IDG C   R+ +  E
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL +  +R L A+ +TY  L+       +   AL L  +M+ +G+ PDI    TL+   C
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476

Query: 484 RQKKMKESEKFFQEAITA-----------GLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
              K+K++ + F+    +           G+ P   TY  +ICG + +G    A + ++ 
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 536

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           M   G  PD ITY ++I GLCKQS+LDEA Q + SM  K  SP  VT  TL   YCK G
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 595



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 237/505 (46%), Gaps = 23/505 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C    + +A   F ++   G+  D  ++  ++   C   RV+EA  +   M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +     +  T T L+   C +G    I +A  LL+ M+  G +P   T+  ++DG+CKK
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREG---RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G T  A  L  K+    +  PNV  Y+A+I   CK+ + + A+ L   M+E+G+ P+  T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y S+I G C  G +  A  L+  M +   +P++  YNA+I+   K+G+  EA EL  +  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R +  + ITY  ++    KQ     A  +F  M   G +PD+  +TTLI  +C  K++ 
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +  +   E    GL     TY ++I G+   G++++A+   Q+M   G  PD +T   L+
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 550 SGLCKQSKLDEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMI 598
            GLC   KL +A + +++M              G+ P  +T   L      +G    A  
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532

Query: 599 ILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + E +  +  +    T +++I  LC + R+  A   F  +  K  + + V+   L N   
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592

Query: 656 ESNKY----ALFSDLSQR--IAEGI 674
           ++ +      LF ++ +R  +A+ I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAI 617



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM   G+   T T N ++   C+   ++ AE++F  M  +G
Sbjct: 331 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC   R+ +    L  M  RG + +  T   LI  FC     G + 
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC---LVGDLN 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +L ++M+  G  P++ T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +I G   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   MG +  +PN+  +N +I+G CK GRV +  EL  +  +R + AD I Y  L+    
Sbjct: 568 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           K      AL +F  M+ +G+ PD      ++  F  +++++ +    ++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 18/384 (4%)

Query: 269 CDKGFRG-------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           C+ GF G              ++ A +L  +M+R    P+V     L+  + +    +  
Sbjct: 39  CEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
             L+ K+ R    + +++++  +I  +C   K+  A     ++ + GL P+  T+T+L++
Sbjct: 99  ISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C       A D    M +  C PN+  +  +++GLC++GR+ EA  LL +  +  LQ 
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +ITY  ++    K+ +T  AL L  +M +   + P++  Y+ +I + C+  +  +++  
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G+FP   TY SMI G+   G  S A +  Q M +   +PD +TY ALI+   K
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRT 611
           + K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A  M  L +       + T
Sbjct: 338 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 397

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
             TLI   C  KR+       H++
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEM 421



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 15/386 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F   GR  +   ++ EM    +     T N ++    + G    A E++DEM  RG
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  +C+  R+  A+     M  +G   D  T T LI  +C       I 
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK---RID 412

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              ELL EM R+G   N  T+  LI G C  G    A  L  +++ S    P++ T   +
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTL 471

Query: 339 ISGYCKEEKMNRAEMLLERMKE-----------QGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + G C   K+  A  + + M++            G+ P+  TY  LI G    G F  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 531

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L + M   G  P+   Y+++IDGLCK+ R+ EA ++      +    + +T+  L++ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K       L LFC M + G+  D   Y TLI  F +   +  +   FQE I++G++P  
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRM 533
            T  +M+ G+     +  AV   + +
Sbjct: 652 ITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 4/289 (1%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + +  R      L +K  +++++ 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  ++ IL+      ++   AL  F ++ K GL+PD+  +TTL+   C + ++ E+  FF
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G I  AV    RM + G  P  ITYG ++ G+CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
                A      M     I P  V    +    CK G  + A  +   + +K     + T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N++I   CS  R   A     ++L +  + D V+  AL NA  +  K+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+  E   +  EM + G+   T T + ++   C+   ++ A ++F  M ++    +  ++
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GSIKQAFELL 284
             ++  YC+ GRV +       M  RG + D      LI      GFR  G+I  A ++ 
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI-----YGFRKVGNINGALDIF 639

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
           +EM+  G  P+  T   ++ G   K   E+A  +   L  S  Y+
Sbjct: 640 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQ 684


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 237/514 (46%), Gaps = 43/514 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++A  GRL+        M     P      N ++         + A +V+  M A GV
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSA------------------------------- 248
             DA ++ + + ++C  GR   A R L +                               
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 249 ----MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
               ML R    D AT   ++ A C KG    + ++  LL +++++G   N +T  + I 
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKG---DVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC+ G  E+A  L  ++       P+V TY  ++ G CK+ K+  A   L RM  QG +
Sbjct: 255 GLCEDGRLEEAVALVERM--GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY ++I G+CK G  + A +L+     +G  P+   Y ++I+GLC +G ++ A EL
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +A  ++L+ D + Y  L+    +Q     AL +   MV+ G +PDI  Y  +I   C+
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              + ++     +AI  G  P   T+ ++I GY +   + SA++  +RM   G APD IT
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATAMIILES 602
           Y ++++GLCK  K  E  + +E MI KG  P  +T   L   +CK  Q + A+ +I+   
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552

Query: 603 LDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKL 635
            D  +    + NTLI   C    +  A L F KL
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKL 586



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 233/471 (49%), Gaps = 9/471 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +FDEM  R V  D +++  ++ A C+ G V E+   L+ +L RG   +  T  + I 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C+ G    +++A  L+E M      P+V T+  L+ GLCK    ++A + +L  + + 
Sbjct: 255 GLCEDG---RLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQ-YLGRMMNQ 309

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  TY  +I GYCK   +  A  LL+    +G +P+  TY SLI G C  G+ ERA
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L +    +   P++  YN+++ GLC++G +  A +++ +  +     D  TY I+++ 
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K      A  +    +  G  PD+  + TLI  +C++ K+  + +  +   T G+ P 
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY S++ G  + G      + F+ M   GC P+ ITY  LI   CK ++L+EA     
Sbjct: 490 VITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 549

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEK 623
            M   G+ P  V+  TL + +C+ GD   A ++ + LD+K +  T +T   LI    S+ 
Sbjct: 550 RMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKL 609

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
            + MA   F +++ K    D  +   L +  C  +N    ++ L++ I++G
Sbjct: 610 NMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 207/420 (49%), Gaps = 5/420 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E GRL+E  ++V  M     P +  T N ++   C+   V+ A +    M  +G 
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAYVAPDVV-TYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++  YC+ G + EA   L   + +G + D  T   LI   C +G    I++
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG---DIER 368

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A EL  E   K  KP++  +  L+ GLC++G    A ++  ++V  +   P++ TY  +I
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV-EEGCHPDIWTYNIII 427

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK   ++ A +++     +G LP+  T+ +LI G+CK    + A  L++ M   G  
Sbjct: 428 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA 487

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  YN++++GLCK G+ +E  E  ++   +  + + ITY IL+    K  + ++A G+
Sbjct: 488 PDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 547

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             RM + GL PD  ++ TLI  FCR   +  +   FQ+    G   T +T+  +I  Y  
Sbjct: 548 IVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 607

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             N+  A K F  M   G  PD  TY  L+ GLCK + +D A      MI KG  P   T
Sbjct: 608 KLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMAT 667



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 239/481 (49%), Gaps = 8/481 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G + E  +++ ++   G+     T N  +   CE G +E A  + + M A  
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY- 275

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++   C+  +V EA ++L  M+++G I D+ T   +I  +C  G    ++
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGM---LQ 332

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL++ V KG+ P+  T+  LI+GLC +G  E+A  LF +  ++ + KP++  Y ++
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE-AQAKDLKPDLVVYNSL 391

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C++  +  A  ++  M E+G  P+  TY  +I G CK+GN   A  +M+    +G 
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ +N +IDG CK+ ++  A +L+++ +   +  D ITY  +L+   K  + K+   
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M+  G  P+   Y  LI  FC+  +++E+          GL P   ++ ++I G+ 
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+G++  A   FQ++++ G +    T+  LI     +  +  A + +  MI KG  P   
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK---LCSEKRVGMAALFFHKL 635
           T   L    CK  +   A   L  +  K ++ ++ T  R    L    RV  A    H +
Sbjct: 632 TYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691

Query: 636 L 636
           +
Sbjct: 692 V 692



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 11/419 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y+ ++      GR+ + D  L++   R  +  ++   L + +       G ++ A +  
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASA--RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAF 94

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E M      P    +  ++D L    + ++A +++++++ +    P+  T+T  +  +C 
Sbjct: 95  ERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA-GVAPDARTHTVRLKSFCL 153

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             + + A  LL  + E+G       Y +++ G    G+   A  L D M      P++  
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N ++  LC+KG V E+  LL K  +R + A+K T  I +    +    ++A+ L  RM 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM- 272

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            A + PD+  Y TL+   C+  K++E+ ++    +  G  P   TY ++I GY + G + 
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +  +     G  PD +TY +LI+GLC +  ++ A + +     K + P  V   +L 
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 585 YEYCKQGDSATAMIIL-----ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              C+QG    A+ ++     E     +W  T N +I  LC    +  AA+  +  + K
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIW--TYNIIINGLCKMGNISDAAVVMNDAIVK 449



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 8/352 (2%)

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D+ +P    Y A I  Y +  ++  A    ERM      P    Y +++         ++
Sbjct: 68  DSLQP---LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A+ +   M   G  P+   +   +   C  GR   A  LL+   +R   A    Y  ++ 
Sbjct: 125 AHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVR 184

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
                     A  LF  M+   + PD+  +  ++ A C++  + ES     + +  G+  
Sbjct: 185 GLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSA 244

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
            K T    I G   DG +  AV   +RM     APD +TY  L+ GLCK SK+ EA Q+ 
Sbjct: 245 NKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYL 303

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSE 622
             M+ +G  P + T  T+   YCK G    A  +L+    K ++    T  +LI  LC+E
Sbjct: 304 GRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAE 363

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEG 673
             +  A   F++   KD   D V   +L K  C +         +++ + EG
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 222/466 (47%), Gaps = 41/466 (8%)

Query: 185 PLITSTLNRVVGIACELGLVEY---------------------AEEVFDEMCARGVCADA 223
           P     LNR+ G  C  G V Y                     AE+V++EM A     + 
Sbjct: 361 PYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNK 420

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +        C MG+  +A + +  M+ +G + D +T + +IT  C+      +++AF L
Sbjct: 421 VNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM---KVEKAFLL 477

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            +EM   G  P+VYT+T+LID  CK G  E+A R +   + S    P+V TYTA++  Y 
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA-RSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-------DLMGKE 396
           K +++ +A  +  RM + G  PNT TY++L+ G CK G  ++A ++        D +G +
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSD 596

Query: 397 ---------GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
                       PN+  Y A+IDGLCK  +V +A ELL        + + I Y  L+   
Sbjct: 597 FYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGF 656

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +   A  +F RM K G  P +H YT+LI A  + +++  + K   + + +   P  
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNV 716

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TYT+MI G  R G    A+K    M + GC P+ +TY +LI GL K  K+D + Q +  
Sbjct: 717 VTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQ 776

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           MI +G +P  VT   L    C  G    A  +L  + +  W + V 
Sbjct: 777 MITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQ 822



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 219/502 (43%), Gaps = 69/502 (13%)

Query: 140 ATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGL 184
           A  L   G F++A ++++ M               ++   E  ++++ F +  EM + G+
Sbjct: 427 ARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 486

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++   C++GL+E A   FDEM + G      +Y  ++ AY +  +V +A  
Sbjct: 487 IPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASD 546

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKG------------------------FRGS---- 276
               M+D G   +  T + L+   C  G                        F G     
Sbjct: 547 IFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606

Query: 277 --------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                               +  A ELL+ M   G +PN   +  LIDG CK G  + A 
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +F ++ +   Y P VHTYT++I    K+ +++ A  +L +M E    PN  TYT++I G
Sbjct: 667 EVFFRMSKC-GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDG 725

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C++G  ++A  L+ +M K GC PN+  Y ++IDGL K G+V  + +L  +   +    +
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY +L++         +A  L   M +      +  Y +++  F   KK   S    +
Sbjct: 786 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLE 843

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD---NITYGALISGLC 553
           E  + G+      Y  +I  + + G +  A++  + M ++  + +     TY +LI  LC
Sbjct: 844 ELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALC 903

Query: 554 KQSKLDEACQFYESMIGKGISP 575
             S+L++A + Y  +  KG+ P
Sbjct: 904 LASQLEKAFELYSEITRKGVVP 925



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 219/510 (42%), Gaps = 68/510 (13%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            VVA L +     + + FF WA     + H         T    N   E  H        
Sbjct: 106 VVVAVLRSVRTPELCVRFFLWAERQVGYSH---------TGACYNALAEVLH-------- 148

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            F +  R  E   ++ E+  +   ++   LN +V   C  G    A E    +   G   
Sbjct: 149 -FDDRARTTE--RLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRP 205

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
             ++Y  +V      G++    R    M + G   D  T+     A C +G R S   A 
Sbjct: 206 SGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG-RWS--DAL 262

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            ++E   R+ +K +    T +I GL +    ++A   FL  +R ++  PNV TY  +++G
Sbjct: 263 VMIE---REDFKLDTVLCTQMISGLMEASLFDEAIS-FLHRMRCNSCIPNVVTYRTLLAG 318

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           + K++++   + ++  M  +G  PN + + SL++ +C   ++  AY L++ M   GC P 
Sbjct: 319 FLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPG 378

Query: 402 IYAYNAIIDG-----------------------------------------LCKKGRVQE 420
              YN  I                                           LC  G+  +
Sbjct: 379 YVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDK 438

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A++++K   ++    D  TY+ +++   +  + ++A  LF  M   G+ PD++ YT LI 
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           +FC+   ++++  +F E  + G  P+  TYT+++  YL+   +  A   F RM   GCAP
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIG 570
           + ITY AL+ GLCK  +  +AC+ Y  MIG
Sbjct: 559 NTITYSALVDGLCKAGESQKACEVYAKMIG 588



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/553 (23%), Positives = 227/553 (41%), Gaps = 85/553 (15%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +  E+GRLK+           G     +T N +V +    G ++    V  EM   G C 
Sbjct: 191 ALEELGRLKD----------FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCT 240

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQA 280
           D  +      A C+ GR ++A      M++R    LD    T +I+   +        +A
Sbjct: 241 DKFTVGCFAQALCKEGRWSDA----LVMIEREDFKLDTVLCTQMISGLMEASL---FDEA 293

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKK---GWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
              L  M      PNV T+  L+ G  KK   GW ++     + ++ ++   PN   + +
Sbjct: 294 ISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR----IISMMMNEGCNPNPSLFNS 349

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT----SLIYGH---------------- 377
           ++  YC       A  LL RM   G  P    Y     S+  G                 
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 378 ---------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
                                C +G F++A+ ++ LM ++G  P+   Y+ +I  LC+  
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +V++A+ L ++     +  D  TYTIL+    K    +QA   F  M   G +P +  YT
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--- 533
            L+ A+ + K++ ++   F   + AG  P   TY++++ G  + G    A + + +M   
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589

Query: 534 -NQIGC------------APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
            + +G             AP+ +TYGALI GLCK  K+ +A +  + M   G  P  +  
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLG 637
             L   +CK G    A  +   + K  ++ TV+T   LI  +  ++R+ +A     ++L 
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709

Query: 638 KDQNVDRVSLAAL 650
                + V+  A+
Sbjct: 710 SSCTPNVVTYTAM 722



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 44/352 (12%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++S+   E  H +   ++  F ++G+L                                 
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKL--------------------------------- 662

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
             + A+EVF  M   G      +Y  ++ A  +  R+  A + LS ML+     +  T T
Sbjct: 663 --DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYT 720

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   C     G  ++A +LL  M ++G  PNV T+T LIDGL K G  + + +LF ++
Sbjct: 721 AMIDGLCRI---GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM 777

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PN  TY  +I+  C    ++ A  LL  MK+         Y S++ G  K   
Sbjct: 778 I-TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--K 834

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD---KIT 439
           F  +  L++ +   G       Y  +ID   K GR+++A EL K+  +     +   K T
Sbjct: 835 FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT 894

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           YT L+      ++ ++A  L+  + + G+ P++ A+  LI    +  K  E+
Sbjct: 895 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEA 946



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 48/117 (41%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G  + A++   R+   G  P   TY AL+  L    ++D   +  + M   G    + 
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T    A   CK+G  + A++++E  D KL       +I  L        A  F H++
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 300


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 255/530 (48%), Gaps = 17/530 (3%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS--SFAEIGRLKEG 172
           +AL FF   +    F+     +      L+ N   + A+ VM+ ++S   +  +  L  G
Sbjct: 121 IALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIVDVLIGG 180

Query: 173 FS-----MVIE--MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +      +V E  M N  LP + +  NR++ I  +  L+  A EV+  M   G+    ++
Sbjct: 181 YLNYQCLLVFEKMMRNRFLPDVKNC-NRILKILRDKNLLVKALEVYRMMGEYGIRPTVTT 239

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+ ++C+ G V  A   +  M +RG      T  +LI     K   G ++QA  L++
Sbjct: 240 YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKK---GELQQAKGLIQ 296

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM + G + + YT+  LI G CKKG   +A  L+ ++V +    P V ++  ++ G+CKE
Sbjct: 297 EMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV-TRGVSPTVASHNTIMYGFCKE 355

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            KM+ A   L  M ++ L+P+  +Y +LIYG C++GN   A+ L+D +     + NI  Y
Sbjct: 356 GKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +IDGLC+ G ++ A +L +    R +  D +TYT+L++   K      A   F  M+ 
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL PD  AYT  I    +     ++ K  +E +T G  P   TY   + G  + GN+  
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEE 535

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +  Q+M + G  PD++TY + +    +   L E  + +  M+ +G +P  VT   L +
Sbjct: 536 AGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIH 595

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFF 632
            +   G    AM     + +K  +  V   N LI   C  +++  A  FF
Sbjct: 596 AHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 238/490 (48%), Gaps = 11/490 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ SF + G ++    +V +M   G      T N ++    + G ++ A+ +  EM   G
Sbjct: 243 MLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAG 302

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++  YC+ G + EA      M+ RG     A+   ++  FC +G    + 
Sbjct: 303 LRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEG---KMS 359

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A + L +M++K   P++ ++  LI G C+ G   +AF + L  +R  N   N+ TY  +
Sbjct: 360 DARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF-ILLDELRFRNLSFNIVTYNTL 418

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+   +  A  L E M  +G+ P+  TYT L+ G CK+GN   A +  D M   G 
Sbjct: 419 IDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +AY A I G  K G   +A++L ++   +    D ITY + ++   K    ++A  
Sbjct: 479 APDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGE 538

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  PD   YT+ + A      ++E  + F + ++ G  PT  TYT +I  + 
Sbjct: 539 LLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHA 598

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A+ YF  M + G  P+ ITY  LI+G CK  K+D+AC+F+  M  KGI P + 
Sbjct: 599 LNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKY 658

Query: 579 TRVTLAYEYCKQGDSATAM-IILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFH 633
           T   L  E C  G    A+ +  + L K+  IR    T   L++KL  + +V        
Sbjct: 659 TYTILINENCNMGKWQEALRLYAQMLGKR--IRPDSCTHGALLKKLDKDYKVQAVQFIES 716

Query: 634 KLLGKDQNVD 643
            +L  D+ +D
Sbjct: 717 LILDGDRTID 726



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 179/382 (46%), Gaps = 4/382 (1%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q   + E+M+R  + P+V     ++  L  K    KA  ++ +++     +P V TY  M
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVY-RMMGEYGIRPTVTTYNTM 243

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +CK  ++ RA  L+ +M+E+G  P+  T+  LI G  K G  ++A  L+  M K G 
Sbjct: 244 LHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGL 303

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             + Y YN +I G CKKG + EA  L ++   R +     ++  ++    K+ +   A  
Sbjct: 304 RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQ 363

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M+K  L PDI +Y TLI  FCR   + E+     E     L     TY ++I G  
Sbjct: 364 QLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC 423

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G++ +A+K  + M   G  PD +TY  L++G CK   +  A +F++ M+  G++P + 
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQF 483

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
                     K GD+A A  + E +  K +   + T N  +  LC    +  A     K+
Sbjct: 484 AYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543

Query: 636 LGKDQNVDRVSLAALKNACYES 657
           +      D V+  +  +A  E+
Sbjct: 544 IRDGHVPDHVTYTSFMHAHMEN 565



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV-----------SSFA----EIGRLKEGFSMVIEMT 180
           Y V    L   GN E A E++Q M+           +SF     E G L+EG  +  +M 
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G      T   ++      G +++A   F EM  +GV  +  +Y +++  +C++ ++ 
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMD 639

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +A ++   M ++G   +  T T+LI   C+    G  ++A  L  +M+ K  +P+  TH 
Sbjct: 640 QACKFFIEMQEKGIFPNKYTYTILINENCN---MGKWQEALRLYAQMLGKRIRPDSCTHG 696

Query: 301 VLIDGLCK 308
            L+  L K
Sbjct: 697 ALLKKLDK 704


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 234/476 (49%), Gaps = 9/476 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G    A ++FD+M    V  + +++  ++ A C+ G V EA   L  ++ RG  ++  T 
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 227

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C+ G    + +A  L++ M R    P+V T+  LI GLCKK   ++A   +L+
Sbjct: 228 NIWIRGLCEAG---RLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMH-YLR 282

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            + +    P+  TY  +I GYCK   +  A  LL+    +G +P+  TY SLI G C  G
Sbjct: 283 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 342

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + ERA +L +    +G  P+I  YN+++ GLC +G +  A +++ +  +     D  TY 
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           I+++   K      A  +    +  G  PD+  + TLI  +C++ K+  + +  +     
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY S++ G  + G ++   + FQ M   GC P+ ITY  LI   C+ +K++EA
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
            +    M  +G+ P  V+  TL Y +C+ GD   A ++ + L++K +     T NTLI  
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEG 673
              +  + MA   F ++L K    D  +   L   +C  +N    +  L + I +G
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 638



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 203/416 (48%), Gaps = 5/416 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E GRL E   +V  M    +P +  T N ++   C+  + + A      M  +G 
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++  YC++  V EA   L   + +G + D  T   LI   C +G    +++
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVER 346

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A EL  E   KG KP++  +  L+ GLC +G    A ++  ++   +   P++ TY  +I
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA-EEGCHPDIQTYNIVI 405

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK   ++ A +++     +G LP+  T+ +LI G+CK    + A  L++ M + G  
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 465

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+   YN++++GLCK G+V E  E  ++   +    + ITY IL+    +  + ++A  +
Sbjct: 466 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 525

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M + GL+PD  ++ TLI  FCR   ++ +   FQ+    G   T +T+ ++I  +  
Sbjct: 526 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 585

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             N+  A K F  M   G   D+ TY  LI G CK + +D A      MI KG  P
Sbjct: 586 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 641



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 234/473 (49%), Gaps = 8/473 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ ++   G+ +   T N  +   CE G +  A  + D M A  V  D  +Y
Sbjct: 203 GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 261

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+     EA  +L  M+++G + D+ T   +I  +C       +++A ELL++
Sbjct: 262 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM---VQEATELLKD 318

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            V KG+ P+  T+  LI+GLC +G  E+A  LF +  ++   KP++  Y +++ G C + 
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  ++  M E+G  P+  TY  +I G CK+GN   A  +M+    +G  P+++ +N
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG CK+ ++  A +L+++ ++  +  D ITY  +L+   K  +  +    F  M+  
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G +P+   Y  LI  FCR  KM+E+ K   +    GL P   ++ ++I G+ R+G++  A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              FQ++ + G +    T+  LI     +  +  A + ++ M+ KG      T   L   
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
            CK  +   A + L  + KK +I +++T   +I  L    RV  A    H ++
Sbjct: 618 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 172/383 (44%), Gaps = 4/383 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +I  ++E   ++ +    G      T   ++   C  G VE A E+F+E  A+G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  +V   C  G +  A + ++ M + G   D  T  ++I   C     G+I 
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM---GNIS 415

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  ++ + + KG+ P+V+T   LIDG CK+   + A +L  ++       P+  TY ++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSV 474

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK  K+N      + M  +G  PN  TY  LI   C+    E A  ++  M +EG 
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  ++N +I G C+ G ++ AY L +K  ++   A   T+  L+     +     A  
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G   D + Y  LI   C+   +  +     E I  G  P+  T+  +I    
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654

Query: 519 RDGNISSAVKYFQRMNQIGCAPD 541
            +  +  AV     M +IG  P+
Sbjct: 655 VNHRVFQAVGIIHIMVKIGVVPE 677



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 12/406 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y   + AY R GR+ +A      M              ++ A  D  +     QA ++  
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYH---DQAHKVYV 112

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+  G  P+++THT+ +   C       A RL     R+  ++  V  Y  ++ G    
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL----RALPHRGAV-AYCTVVCGLYAH 167

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
              + A  L ++M    + PN   +  +++  CK G+   A  L+  + + G + N++ Y
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 227

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  I GLC+ GR+ EA  L+    +     D +TY  L+    K++  ++A+    RM+ 
Sbjct: 228 NIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PD   Y T+I  +C+   ++E+ +  ++A+  G  P + TY S+I G   +G++  
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F      G  PD + Y +L+ GLC Q  +  A Q    M  +G  P   T   +  
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMA 628
             CK G+ + A +++     K ++    T NTLI   C   ++  A
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 7/369 (1%)

Query: 140 ATSLISNGNFER--AHEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           AT L+ +  F+     +V  C +++     G ++    +  E    G+       N +V 
Sbjct: 312 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 371

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C  GL+ +A +V +EM   G   D  +Y +++   C+MG +++A   ++  + +G + 
Sbjct: 372 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 431

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T   LI  +C    R  +  A +L+E M   G  P+  T+  +++GLCK G   +  
Sbjct: 432 DVFTFNTLIDGYCK---RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             F +++    + PN  TY  +I  +C+  KM  A  ++ +M ++GL P+  ++ +LIYG
Sbjct: 489 ETFQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C+ G+ E AY L   + ++G +     +N +I     K  +  A ++  +   +  +AD
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY +L+    K A   +A      M+K G  P +  +  +I +     ++ ++     
Sbjct: 608 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 667

Query: 497 EAITAGLFP 505
             +  G+ P
Sbjct: 668 IMVKIGVVP 676



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 17/285 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +  +L     +V  M   G+   T T N V+   C+ G V    E F EM  +G
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++  +CR  ++ EA + +  M   G   D  +   LI  FC     G ++
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN---GDLE 555

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ L +++  KG+     T   LI     K     A ++F +++ S  ++ + +TY  +
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML-SKGHRADSYTYRVL 614

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK   ++RA M L  M ++G +P+ +T+  +I          +A  ++ +M K G 
Sbjct: 615 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674

Query: 399 TP------------NIYAYNAIIDGLCKKGRVQ-EAYELLKKAFQ 430
            P             I A   +++ L KKG +    YE+L +  +
Sbjct: 675 VPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVR 719


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 235/469 (50%), Gaps = 15/469 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++       RL++  + + E           + N ++   C++G V+ A+  F  M   G
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
           +  D  SY +++   C  G + EA  + + M + G   D  T  +L       GFR  G 
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-----GFRILGL 355

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I  A+++++ M+  G  P++ T+T+LI G C+ G  E++F+L  K++ S   K ++ TYT
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML-SQGLKLSIVTYT 414

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++S  CK  +++ A +LL  M+  GL P+  TY+ LI+G CK G  E A +L + M  +
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSK 474

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN +  +AII GL +KG + EA        + ++  + I Y I++  + K     +A
Sbjct: 475 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 534

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +  + ++++ G++P I  + +LI  FC++ K+ E+ K        GL PT  TYT+++ G
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 594

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y  +G++ S       M      P  ITY  ++ GLCK+ +L E+ Q  + M  +G+ P 
Sbjct: 595 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 654

Query: 577 EVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLC 620
           ++T  T+   +CK  D   A      ++  SL       T N LI  LC
Sbjct: 655 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS--PVTYNVLINGLC 701



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 247/505 (48%), Gaps = 11/505 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E      +M N+G+     T N +      LGL+  A +V   M   G+  D  +Y
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +C+MG + E+ +    ML +G  L   T T+L+++ C  G    I +A  LL E
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSG---RIDEAVILLHE 435

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G KP++ T++VLI GLCK+G  E+A  L+ ++     Y PN    +A+ISG  ++ 
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY-PNSFVCSAIISGLFEKG 494

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A+M  + + +  +      Y  +I G+ K+GN   A      + ++G +P I  +N
Sbjct: 495 AISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFN 554

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I G CKKG++ EA +LL       L    +TYT L++ + ++ +      +   M   
Sbjct: 555 SLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 614

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P    YT ++   C++ ++ ES +  +     GLFP + TY ++I  + +  ++  A
Sbjct: 615 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 674

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            +   +M Q    P  +TY  LI+GLC    L +A +   ++  + I   +V   T+   
Sbjct: 675 FQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 734

Query: 587 YCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK----D 639
           +C +GD   A++    + ++   + IR  + +I +LC    +  A  FF  +L      D
Sbjct: 735 HCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794

Query: 640 QNVDRVSLAALKNACYESNKYALFS 664
           Q++  V L A   +   ++ + +F+
Sbjct: 795 QDICLVMLNAFHRSGDPNSVFEIFA 819



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 39/380 (10%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           +++  E+   G   N YT+ +LIDGLC++   + A   FL+    + + P+V ++ A++S
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVT-FLRETGGEEFGPSVVSFNALMS 278

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G+CK   ++ A+     M + GLLP+  +Y  L++G C  G+ E A +  + M   G  P
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 401 NIYAYNAIIDGL-----------------------------------CKKGRVQEAYELL 425
           +I  YN + +G                                    C+ G ++E+++L 
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +K   + L+   +TYT+LLS   K     +A+ L   M   GL PD+  Y+ LI   C++
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             ++E+ + ++E  +  ++P     +++I G    G IS A  YF  + +   A + I Y
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             +I G  K   + EA + Y+ +I KGISP  VT  +L Y +CK+G  A A+ +L+++  
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578

Query: 606 KLWIR---TVNTLIRKLCSE 622
              +    T  TL+   C E
Sbjct: 579 HGLVPTSVTYTTLMNGYCEE 598



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 39/417 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS  + GR+ E   ++ EM   GL     T + ++   C+ G VE A E+++EMC++ 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 219 ------VCADASS-----------------------------YKLMVVAYCRMGRVTEAD 243
                 VC+   S                             Y +M+  Y ++G + EA 
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R    ++++G      T   LI  FC KG    + +A +LL+ +   G  P   T+T L+
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKG---KLAEAVKLLDTIKVHGLVPTSVTYTTLM 592

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           +G C++G     F + L  + +   KP   TYT ++ G CKE +++ +  LL+ M  +GL
Sbjct: 593 NGYCEEGDMHSMFDM-LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 651

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TY ++I   CK  + ++A+ L + M +    P+   YN +I+GLC  G +++A  
Sbjct: 652 FPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADR 711

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL     + ++  K+ YT ++  H  + + + AL  F +MV+ G    I  Y+ +I   C
Sbjct: 712 LLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC 771

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           ++  + +++ FF   +T G+ P ++    M+  + R G+ +S  + F  M + G  P
Sbjct: 772 KRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 148/315 (46%), Gaps = 6/315 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           ++  N   +  +   Y + E ++ A  +L +MK   L  +  TY SL+Y    + + +  
Sbjct: 163 DWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIM 219

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           +D+ + +   G   N Y    +IDGLC++ R+Q+A   L++    E     +++  L+S 
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K      A   FC M+K GL PD+++Y  L+   C    M+E+ +F  +    G+ P 
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY  +  G+   G IS A K  QRM   G  PD +TY  LI G C+   ++E+ +  E
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKE 399

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRTVNTLIRKLCSEK 623
            M+ +G+    VT   L    CK G    A+I+L   E +  K  + T + LI  LC   
Sbjct: 400 KMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRG 459

Query: 624 RVGMAALFFHKLLGK 638
            V  A   + ++  K
Sbjct: 460 AVEEAIELYEEMCSK 474


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 227/460 (49%), Gaps = 19/460 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F   G +     +V  M   GL     T N +V   C+ G +E A +VFDEM   G
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  +V  YC+ G   EA    + M  +G + D  T T LI   C     G+++
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA---GNLE 347

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ +M  +G + N  T T LIDG CKKG+ + A  L ++ ++    KP+V  Y A+
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL-LAVRGMKQCRIKPSVVCYNAL 406

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC   +M+ A  LL  M+ +GL P+  TY+++I  +CK  +   A++L   M ++G 
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+++I  LC + R+ +A+ L K   +  LQ D+ TYT L+  H K+   + AL 
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI-C-- 515
           L  +MVKAG+ PD+  Y+ LI    +  +  E+++   +       P    Y +++ C  
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCR 586

Query: 516 ------------GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                       G+   G ++ A K +Q M       D   Y  LI G C+   + +A  
Sbjct: 587 KAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALS 646

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           F++ M+  G +P   + ++L     + G    A  +++ L
Sbjct: 647 FHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 227/473 (47%), Gaps = 58/473 (12%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A   FD M + GV  +  +Y ++V A C  G   EA   L  M   G   +  T   L+ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 267 AFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
           AF    FR G +  A  L+  M   G KPN+ T   +++G+CK G  E A ++F ++VR 
Sbjct: 234 AF----FRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR- 288

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           +   P+  +Y  ++ GYCK    + A  +   M ++G++P+  T+TSLI+  CK GN ER
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348

Query: 386 AYDLMDLMGKEG-----------------------------------CTPNIYAYNAIID 410
           A  L+  M + G                                     P++  YNA+I+
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G C  GR+ EA ELL +   + L+ D +TY+ ++S + K  +T  A  L  +M++ G+ P
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   Y++LI   C +K++ ++   F+  I  GL P + TYTS+I G+ ++GN+ SA+   
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            +M + G  PD +TY  LI+GL K ++  EA Q    +  +   P   T+       C++
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN-TKYDALMHCCRK 587

Query: 591 GDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            +                +++V  L++  C +  +  A   +  +L ++ N+D
Sbjct: 588 AE----------------LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLD 624



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 213/422 (50%), Gaps = 7/422 (1%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +T A R+  +ML  G   +  T  +L+ A C +G R   K+A  +L +M   G  PNV T
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR---KEALSILRDMRGAGCGPNVVT 227

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+    + G  + A RL + ++R    KPN+ T+ +M++G CK  KM  A  + + M
Sbjct: 228 YNTLVAAFFRAGEVDGAERL-VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +GL P+  +Y +L+ G+CK G    A  +   M ++G  P++  + ++I  +CK G +
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           + A  L+++  +R LQ +++T+T L+    K+     AL     M +  + P +  Y  L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  +C   +M E+ +   E    GL P   TY+++I  Y ++ +  SA +  Q+M + G 
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD ITY +LI  LC + +L +A   +++MI  G+ P E T  +L   +CK+G+  +A+ 
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526

Query: 599 ILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + + + K   +  V T   LI  L    R   A     KL  +D         AL + C 
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCR 586

Query: 656 ES 657
           ++
Sbjct: 587 KA 588



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 206/443 (46%), Gaps = 53/443 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+   + G++++   +  EM   GL     + N +VG  C+ G    A  VF EM  +G
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
           +  D  ++  ++   C+ G +  A   +  M +RG  ++  T T LI  FC KGF     
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G + +A ELL EM  KG KP+V T++ +I   
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK   T  AF L  +++      P+  TY+++I   C E++++ A +L + M + GL P+
Sbjct: 446 CKNCDTHSAFELNQQMLEK-GVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPD 504

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TYTSLI GHCK GN E A  L D M K G  P++  Y+ +I+GL K  R  EA +LL 
Sbjct: 505 EFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLF 564

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K +  +       Y  L+    ++AE K  L                    L+  FC + 
Sbjct: 565 KLYHEDPIPANTKYDALM-HCCRKAELKSVL-------------------ALLKGFCMKG 604

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            M E++K +Q  +          Y+ +I G+ R GN+  A+ + ++M Q G AP++ +  
Sbjct: 605 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTI 664

Query: 547 ALISGLCKQSKLDEACQFYESMI 569
           +LI GL +   + EA Q  + ++
Sbjct: 665 SLIRGLFENGMVVEADQVIQQLL 687



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 175/386 (45%), Gaps = 40/386 (10%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y P+V  Y A++     +  +  A    + M   G+ PN  TY  L+   C  G+ + A 
Sbjct: 152 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210

Query: 388 DLMDLMGKEGCTPNIYAY-----------------------------------NAIIDGL 412
            ++  M   GC PN+  Y                                   N++++G+
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK G++++A ++  +  +  L  D ++Y  L+  + K   + +AL +F  M + G+ PD+
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +T+LI   C+   ++ +    ++    GL   + T+T++I G+ + G +  A+   + 
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M Q    P  + Y ALI+G C   ++DEA +    M  KG+ P  VT  T+   YCK  D
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450

Query: 593 SATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
           + +A  + + + +K  +    T ++LIR LC EKR+  A + F  ++      D  +  +
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510

Query: 650 LKNA-CYESNKYALFSDLSQRIAEGI 674
           L +  C E N  +  S   + +  G+
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGV 536



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 19/387 (4%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E+A+T+V  +      M  ++F     GF K + F+   ++ A   +     + +     
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCK-KGFLDDALL-AVRGMKQCRIKPSVVCYN 404

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            +++ +  +GR+ E   ++ EM   GL     T + ++   C+      A E+  +M  +
Sbjct: 405 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 464

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  DA +Y  ++   C   R+++A      M+  G   D  T T LI   C +G   ++
Sbjct: 465 GVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG---NV 521

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN------ 331
           + A  L ++MV+ G  P+V T++VLI+GL K     +A +L  KL   D    N      
Sbjct: 522 ESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDAL 581

Query: 332 --------VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                   + +  A++ G+C +  MN A+ + + M ++    + + Y+ LI+GHC+ GN 
Sbjct: 582 MHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 641

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            +A      M + G  PN  +  ++I GL + G V EA +++++       AD      L
Sbjct: 642 MKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKAL 701

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNP 470
           +  +L +      L +   M K GL P
Sbjct: 702 IDLNLNEGNVDAVLDVLHGMAKDGLLP 728


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 194/350 (55%), Gaps = 4/350 (1%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           +LD G   +     +L+  FC  G  GS +  F+   E+ ++G +P V +   LI G CK
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFD---EIPKRGLRPTVVSFNTLISGCCK 189

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  E+ FRL   ++ S+   P+V T++A+I+G CKE +++   +L + M  +GL+PN  
Sbjct: 190 AGAVEEGFRL-KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+T LI G CK G  + A     +M  +G  P++  YNA+I+GLCK G ++EA  L+ + 
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
               L+ D+IT+T L+    K  + + AL +  RMV+ G+  D  A+T LI+  CR  ++
Sbjct: 309 SASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRV 368

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            ++E+  ++ ++AG  P   TYT ++  + + GN+    K  + M   G  P  +TY AL
Sbjct: 369 HDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNAL 428

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           ++GLCKQ ++  A    ++M+  G++P ++T   L   + K G S    I
Sbjct: 429 MNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDI 478



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 188/389 (48%), Gaps = 7/389 (1%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L+  ++  +E+ ++G P      N ++   C++G V  A  VFDE+  RG+     S+  
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C+ G V E  R    M       D  T + LI   C +   G + +   L +EM 
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKE---GRLDEGSLLFDEMC 239

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            KG  PN  T TVLIDG CK G  + A + F +++ +   +P++ TY A+I+G CK   +
Sbjct: 240 GKGLVPNGVTFTVLIDGQCKGGKVDLALKNF-QMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L+  M   GL P+  T+T+LI G CK G+ E A ++   M +EG   +  A+  +
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GLC+ GRV +A  +L+       + D  TYT+++    K+        L   M   G 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P +  Y  L+   C+Q ++K ++      +  G+ P   TY  ++ G+ + G+ S  V 
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS-SVDVD 477

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSK 557
            F   ++ G   D  +Y AL++   K SK
Sbjct: 478 IFN--SEKGLVKDYASYTALVNESSKTSK 504



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 172/327 (52%), Gaps = 4/327 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E+++  +L+++ S  Y PN   +  ++ G+CK   +  A ++ + + ++GL P   ++ +
Sbjct: 124 ERSWAFYLEVLDS-GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI G CK G  E  + L  +M  E   P+++ ++A+I+GLCK+GR+ E   L  +   + 
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L  + +T+T+L+    K  +   AL  F  M+  G+ PD+  Y  LI   C+   +KE+ 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +   E   +GL P + T+T++I G  + G++ SA++  +RM + G   D++ +  LISGL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           C+  ++ +A +    M+  G  P + T   +   +CK+G+      +L+ +        +
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLL 636
            T N L+  LC + +V  A +    +L
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAML 449



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 7/321 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G ++EGF +   M +  +     T + ++   C+ G ++    +FDEMC +G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++ +++   C+ G+V  A +    ML +G   D  T   LI   C     G +K
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV---GDLK 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ EM   G +P+  T T LIDG CK G  E A  +  ++V       +V  +T +
Sbjct: 300 EARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDV-AFTVL 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C++ +++ AE +L  M   G  P+  TYT ++   CK GN    + L+  M  +G 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YNA+++GLCK+G+V+ A  LL       +  + ITY ILL  H K   +   + 
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VD 477

Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
           +F    + GL  D  +YT L+
Sbjct: 478 IFNS--EKGLVKDYASYTALV 496



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 11/296 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GRL EG  +  EM   GL     T   ++   C+ G V+ A + F  M A+G
Sbjct: 218 LINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQG 277

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++   C++G + EA R ++ M   G   D  T T LI   C     G ++
Sbjct: 278 VRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK---YGDME 334

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+   MV +G + +    TVLI GLC+ G    A R+ L+ + S  +KP+  TYT +
Sbjct: 335 SALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERM-LRDMLSAGFKPDDPTYTMV 393

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +CK+  +     LL+ M+  G +P   TY +L+ G CK G  + A  L+D M   G 
Sbjct: 394 VDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGV 453

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE--LQADKITYTILLSEHLKQAE 452
            PN   YN +++G  K G   +        F  E  L  D  +YT L++E  K ++
Sbjct: 454 APNDITYNILLEGHSKHGSSVDV-----DIFNSEKGLVKDYASYTALVNESSKTSK 504



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 7/230 (3%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L+  E +++   +  ++ +G  P+   +  L+  FC+   +  +   F E    GL PT 
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            ++ ++I G  + G +    +    M      PD  T+ ALI+GLCK+ +LDE    ++ 
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKLWIRTVNTLIRKLCSE 622
           M GKG+ P  VT   L    CK G    A     M++ + +   L   T N LI  LC  
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV--TYNALINGLCKV 295

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             +  A    +++       DR++   L + C +        ++ +R+ E
Sbjct: 296 GDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVE 345


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 232/470 (49%), Gaps = 41/470 (8%)

Query: 170 KEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           ++   ++ EM  NG  P + +    + G+ C +G VE A +    + +     +   Y  
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGL-CRVGYVESALDFVRSLISANGLVNVYCYNA 330

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C+ G + EA + L  M   G   D  T ++LI  FC +G    +++   L+EEM 
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG---DVEKGLYLIEEMK 387

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
               +P++ +++ L  GLCKK  ++ +  +F  L  +  YK +   Y+ +I G+C +  +
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL-GAAGYKYDQTAYSILIKGFCMQGDL 446

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYG-------------------------------- 376
           + A  L+E M    L P+ + + SL++G                                
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506

Query: 377 ---HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
              HC+ G  E A +LM+ M  +G  PN++ YNA+I+ LCK+ + + A EL     +R +
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
               + Y+ L+    KQ+ +++AL L+ RM+K G+ PD+ AYT LI   C + +M E+  
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F++    G+ P K +YTS+I G+ R G++  A   F  M Q G  P  +TY +L+ G C
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           K +++D A    + M  KGI+P  VT   L   + ++G+   A+ +L  +
Sbjct: 687 KMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 200/429 (46%), Gaps = 39/429 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE---------- 241
           N ++   C+ G ++ A +V +EM + G+  D  +Y +++  +C+ G V +          
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 242 ----------------------ADRWLSAMLDRGAI---LDNATLTLLITAFCDKGFRGS 276
                                 +D  L    D GA     D    ++LI  FC    +G 
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC---MQGD 445

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A +L+EEMVR    P+      L+ G CK G    A   F  ++      P++ T  
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFF-NMMLEGGILPSIATCN 504

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I  +C+E ++  A  L+  M+ QG+ PN  TY ++I   CK    ERA +L  LM K 
Sbjct: 505 VIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++  Y+ +IDG  K+   Q+A  L  +  +  +  D + YTIL++    ++   +A
Sbjct: 565 NVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEA 624

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF +M + G+ PD  +YT++IA FCR   M+++   F E +  G  PT  TYTS++ G
Sbjct: 625 YNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y +   I  A      M + G  PD +TY  LI+   ++  LD+A +    M   G+ P 
Sbjct: 685 YCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744

Query: 577 EVTRVTLAY 585
            +T + L +
Sbjct: 745 HMTYMMLEW 753



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 237/501 (47%), Gaps = 13/501 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE------YAEEVFD 212
           ++   AE  R +   S+  EM + G P    T   ++   C+    E       A E+ +
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM   G      +Y   +   CR+G V  A  ++ +++    +++      +I   C KG
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A ++LEEM   G  P+VYT+++LI G CK+G  EK   L ++ ++  N +P++
Sbjct: 340 ---ELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL-IEEMKYSNMEPSL 395

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+++  G CK+   + +  +   +   G   +   Y+ LI G C  G+ + A+ LM+ 
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M +    P+   + +++ G CK G    A E      +  +     T  +++  H ++  
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++AL L   M   G+ P++  Y  +I   C+++K + + + F   +   + P+   Y++
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ +  N   A+  + RM +IG  PD + Y  LI+ LC +S++ EA   ++ M   G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAA 629
           ++P +++  ++   +C+ GD   A  +   + ++  + TV T   L+   C   R+ +A 
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIAD 695

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
           +   ++  K    D V+   L
Sbjct: 696 MLIDEMKRKGITPDVVTYNVL 716



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 154/403 (38%), Gaps = 54/403 (13%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE-KAFRLFLKLVRS-DNYK 329
           GF  SI     ++  +   G    VY   +L D +C        AF LF  L+ S  +  
Sbjct: 119 GFSRSIDAFRTVVNVLALAGMHMEVYA--LLRDIVCYYNKVNLDAFELFPILLESPKDAA 176

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +V  +  +I  +     +  A  +  + K+ GL  +T +   L+    +    E    L
Sbjct: 177 RSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 390 MDLMGKEGCTPNIYAYNAIID--------------------------------------- 410
            + M   G  PN++ Y  +++                                       
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 411 --GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
             GLC+ G V+ A + ++         +   Y  ++    K+ E  +AL +   M   G+
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +PD++ Y+ LI  FC+Q  +++     +E   + + P+  +Y+S+  G  +      ++ 
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+ +   G   D   Y  LI G C Q  LD A +  E M+   ++P      +L + +C
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476

Query: 589 KQGDSATAMIILESLDKKLW------IRTVNTLIRKLCSEKRV 625
           K G    A   LE  +  L       I T N +I   C E RV
Sbjct: 477 KMGLWVNA---LEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 128/331 (38%), Gaps = 65/331 (19%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--------------KAFQRELQADK- 437
           M K G + +I A+  +++ L   G   E Y LL+              + F   L++ K 
Sbjct: 115 MKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKD 174

Query: 438 -----ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                I + +L+      +  + A+ +F +  K GL     +   L+       + +   
Sbjct: 175 AARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLR 234

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLR------DGNISSAVKYFQRMNQIGCAPDNIT-- 544
             F+E  + G  P   TYT M+  Y +      D +   A +  + M + G +P  +T  
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 545 ---------------------------------YGALISGLCKQSKLDEACQFYESMIGK 571
                                            Y A+I GLCK+ +LDEA +  E M   
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMA 628
           GISP   T   L + +CKQGD    + ++E +   + +  + + ++L   LC ++   ++
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414

Query: 629 ALFFHKLLGKDQNVDRVSLAAL-KNACYESN 658
              F  L       D+ + + L K  C + +
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 204/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   G L      +  +   GL   +      V   C  GL  +A  +F  M  RG
Sbjct: 80  LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG 139

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++   C  G V EA    + M   G   D+   ++++   C  G  G   
Sbjct: 140 CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG--- 196

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL + + KG+ PNV  +  LIDG C  G  E A  +F K ++S    PNV TYT +
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF-KGMQSKGCLPNVRTYTQL 255

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK  K+ RA +L  RM E GL PN  TYT+LI G C  G+ E A+ L+  M   G 
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN +    +ID LCK GR++EA + L    Q+ ++ +++ YT ++    K  +   A  
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +++  G  PD H Y++LI   CR+ K+ E+     + I +G+      +T +I  +L
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+    S      RM   G  PD +TY   I   C+  ++++A      MI  G+ P   
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495

Query: 579 TRVTLAYEYCKQG 591
           T  TL   Y   G
Sbjct: 496 TYNTLIKGYANLG 508



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 198/411 (48%), Gaps = 46/411 (11%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G+V  A  VF  M   G   D+  Y +MV   C  GR  EA   L+  + +G + + 
Sbjct: 155 CGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNV 214

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A    LI  +C  G    ++ A ++ + M  KG  PNV T+T LI G CK G  E+A  L
Sbjct: 215 AVYNALIDGYCSTG---DLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVL 271

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT--------- 369
           + +++ +    PNV TYT +I G C E  +  A  LL  M+  GL PN  T         
Sbjct: 272 YSRMIEA-GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330

Query: 370 --------------------------YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
                                     YTS+I   CK G F+ A++LM  +  EG  P+ +
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y+++IDGLC++ ++ EA  LL    +  +QA+ + +TIL+ +HL++  +     +  RM
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRM 450

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
             AG+ PD+  YT  I ++C+  +M+++E    + I  G+ P   TY ++I GY   G +
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           S A    + M   GC P++ +Y  L+  L K++        Y  ++   IS
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS-------YHDLVADSIS 554



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 161/348 (46%), Gaps = 4/348 (1%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+HTYT +I+ YC    +  A+  L  +   GL P+++ YTS + G+C+ G F  A  L 
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            LM + GC    + Y A++ GLC  G V+EA  +    +      D   Y+I++      
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A+ L    +  G  P++  Y  LI  +C    ++ +   F+   + G  P   TY
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T +ICG+ + G +  A+  + RM + G AP+ +TY  LI G C +  L+ A +   SM  
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGM 627
            G++P E T + L    CK G    A   L SL  K + +  V   ++I  LC   +   
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDG 372

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           A     K++ +    D    ++L +  C E+      S L+  I  G+
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/554 (22%), Positives = 214/554 (38%), Gaps = 108/554 (19%)

Query: 108 ANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM-------- 159
           A  AG  VAL       GF      + +Y        S G+ E A ++ + M        
Sbjct: 192 AGRAGEAVALLTDAMGKGFVPN---VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPN 248

Query: 160 -------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
                  +  F + G+++    +   M   GL     T   ++   C  G +E+A  +  
Sbjct: 249 VRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLH 308

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M A G+  +  +  +++ A C+ GR+ EA ++L +++ +G  ++    T +I A C  G
Sbjct: 309 SMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSG 368

Query: 273 -FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF------------ 319
            F G    A  L+++++ +G+ P+ + ++ LIDGLC++    +A  L             
Sbjct: 369 KFDG----AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANA 424

Query: 320 ----------LKLVRSDN------------YKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
                     L+  RSD+             KP+V TYT  I  YC++ +M  AE ++ +
Sbjct: 425 VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQ 484

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN---------------- 401
           M + G+ PN  TY +LI G+  +G   +A+  +  M   GC PN                
Sbjct: 485 MIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544

Query: 402 -----------------------------------IYAYNAIIDGLCKKGRVQEAYELLK 426
                                               Y Y+  I  L K  R++EA   L 
Sbjct: 545 YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 L   +  YT ++    +    K+AL     MVK    P + +Y  +I A C + 
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
               ++  F + ++      +  +  +I G L+ GN +   +    M +  C P +  Y 
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724

Query: 547 ALISGLCKQSKLDE 560
            L   +   S+  E
Sbjct: 725 RLTGEITVTSEAQE 738


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 236/468 (50%), Gaps = 8/468 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LGL + A+  F  M   G+  D  SY +++      G + EA    + M
Sbjct: 187 SFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDM 246

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTHTVLIDGLCK 308
             +G   D  T  ++   F      G +  A E++++M+  +G KP++ T+TVLI G C+
Sbjct: 247 EKQGLQPDMVTYKIVAKGF---HLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQ 303

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  E+A RL   L+ S  ++ NV  Y+ ++S  CK  +++ A  LL  M+   L P+  
Sbjct: 304 MGNIEEALRLRRDLL-SSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY+ LI+G CK G  ++A  L   M      PN +A++ I+ GLC+KG + +A       
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
               L+ D   Y I++  ++K  + ++A+ L+ R+    + P I  + +LI  FC+ +K+
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+ +  +     GL P+  TYT+++  Y  +GNI+   +    MN     P  +TY  +
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DK 605
           I GLCKQ KL+E+ Q  E M  KG++P ++T  T+   +CK  D   A  +L+ +   + 
Sbjct: 543 IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +    T N LI  LC    V  A      L  ++ N+ +V+   +  A
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKA 650



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 211/417 (50%), Gaps = 4/417 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++G ++E   +  ++ ++G  L     + ++   C+ G V+ A ++  EM A  
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++   C+ G+V +A +    M       ++   + ++   C+KG     +
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F+    ++    +P+V  + ++IDG  K G  E+A RL+ +L R     P++ T+ ++
Sbjct: 417 MYFD---SLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL-RDKAITPSIVTFNSL 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK  K+  A  LLE +K  GL P+  TYT+L+  +C+ GN  + ++L+  M  +  
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  Y  +I GLCK+ +++E+ +LL+    + L  D+ITY  ++    K  + ++A  
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+   L P    Y  LI   CR   ++++++         +  TK  YT+MI  + 
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             G+   AVK F +M + G       Y A+I+ LCK+  ++EA  ++  M+  G+SP
Sbjct: 653 VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSP 709



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 203/422 (48%), Gaps = 19/422 (4%)

Query: 135 LYIVCATSLISNGNFERAHEVM---------------QCMVSSFAEIGRLKEGFSMVIEM 179
           LY V  +SL   G  + A +++                 ++    + G++++   +  EM
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
             N +   +   + ++   CE G++  A   FD +    +  D + Y +M+  Y ++G V
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            EA R    + D+       T   LI  FC       + +A  LLE +   G +P+  T+
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR---KVVEARRLLESIKLHGLEPSAVTY 504

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T L++  C++G   K   L L++   D  +P V TYT +I G CK+ K+  +  LLE M+
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKD-IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +GL P+  TY ++I   CK  +  +A++L+D M      P    YN +IDGLC+ G V+
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  +L     R +   K+ YT ++  H  + + ++A+ +F +MV+ G    I  Y+ +I
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C++  + E++ +F   ++ G+ P +E +  M+  + R G++ S  +    M + G  
Sbjct: 684 NRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743

Query: 540 PD 541
            D
Sbjct: 744 HD 745



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 19/335 (5%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +L +M  +  +P++ T+  L+  L         +      ++      +  T +
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVY----NDIKDSGTPQSARTSS 154

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G C + +   A + L +   +   P+  ++ +++  +CK+G  + A     +M K 
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ Y+YN +I GL   G ++EA EL     ++ LQ D +TY I+       A+    
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIV-------AKGFHL 267

Query: 457 LGLFC--------RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           LGL           +   GL PD+  YT LI   C+   ++E+ +  ++ +++G      
Sbjct: 268 LGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVI 327

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+ ++    + G +  A++    M      PD +TY  LI GLCKQ K+ +A Q Y+ M
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
               I P       +    C++G  + A +  +SL
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 144/318 (45%), Gaps = 7/318 (2%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           L R   +K        M+        ++ A  +L +MKEQ L P+  TY SL+Y    + 
Sbjct: 73  LARKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYN---LR 129

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + +  +D+ + +   G   +    + I+DGLC + R ++A   L++   +E     +++ 
Sbjct: 130 HTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFN 189

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++S + K      A   FC M+K G+ PD ++Y  LI        M+E+ +   +    
Sbjct: 190 TIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ 249

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDE 560
           GL P   TY  +  G+   G +S A +  Q+M    G  PD +TY  LI G C+   ++E
Sbjct: 250 GLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEE 309

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRTVNTLIR 617
           A +    ++  G     +    L    CK+G    A+ +L   E+ + +  + T + LI 
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIH 369

Query: 618 KLCSEKRVGMAALFFHKL 635
            LC + +V  A   + ++
Sbjct: 370 GLCKQGKVQQAIQLYKEM 387


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 234/476 (49%), Gaps = 9/476 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G    A ++FD+M    V  + +++  ++ A C+ G V EA   L  ++ RG  ++  T 
Sbjct: 166 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 225

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C+ G    + +A  L++ M R    P+V T+  LI GLCKK   ++A   +L+
Sbjct: 226 NIWIRGLCEAG---RLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMH-YLR 280

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            + +    P+  TY  +I GYCK   +  A  LL+    +G +P+  TY SLI G C  G
Sbjct: 281 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 340

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + ERA +L +    +G  P+I  YN+++ GLC +G +  A +++ +  +     D  TY 
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           I+++   K      A  +    +  G  PD+  + TLI  +C++ K+  + +  +     
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY S++ G  + G ++   + FQ M   GC P+ ITY  LI   C+ +K++EA
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
            +    M  +G+ P  V+  TL Y +C+ GD   A ++ + L++K +     T NTLI  
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEG 673
              +  + MA   F ++L K    D  +   L   +C  +N    +  L + I +G
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 636



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 203/416 (48%), Gaps = 5/416 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E GRL E   +V  M    +P +  T N ++   C+  + + A      M  +G 
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++  YC++  V EA   L   + +G + D  T   LI   C +G    +++
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVER 344

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A EL  E   KG KP++  +  L+ GLC +G    A ++  ++   +   P++ TY  +I
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE-EGCHPDIQTYNIVI 403

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK   ++ A +++     +G LP+  T+ +LI G+CK    + A  L++ M + G  
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+   YN++++GLCK G+V E  E  ++   +    + ITY IL+    +  + ++A  +
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M + GL+PD  ++ TLI  FCR   ++ +   FQ+    G   T +T+ ++I  +  
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 583

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             N+  A K F  M   G   D+ TY  LI G CK + +D A      MI KG  P
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 234/473 (49%), Gaps = 8/473 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ ++   G+ +   T N  +   CE G +  A  + D M A  V  D  +Y
Sbjct: 201 GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 259

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+     EA  +L  M+++G + D+ T   +I  +C       +++A ELL++
Sbjct: 260 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM---VQEATELLKD 316

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            V KG+ P+  T+  LI+GLC +G  E+A  LF +  ++   KP++  Y +++ G C + 
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKPDIVVYNSLVKGLCLQG 375

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  ++  M E+G  P+  TY  +I G CK+GN   A  +M+    +G  P+++ +N
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG CK+ ++  A +L+++ ++  +  D ITY  +L+   K  +  +    F  M+  
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G +P+   Y  LI  FCR  KM+E+ K   +    GL P   ++ ++I G+ R+G++  A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              FQ++ + G +    T+  LI     +  +  A + ++ M+ KG      T   L   
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
            CK  +   A + L  + KK +I +++T   +I  L    RV  A    H ++
Sbjct: 616 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 668



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 172/383 (44%), Gaps = 4/383 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +I  ++E   ++ +    G      T   ++   C  G VE A E+F+E  A+G
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  +V   C  G +  A + ++ M + G   D  T  ++I   C     G+I 
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK---MGNIS 413

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  ++ + + KG+ P+V+T   LIDG CK+   + A +L  ++       P+  TY ++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSV 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK  K+N      + M  +G  PN  TY  LI   C+    E A  ++  M +EG 
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  ++N +I G C+ G ++ AY L +K  ++   A   T+  L+     +     A  
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G   D + Y  LI   C+   +  +     E I  G  P+  T+  +I    
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 519 RDGNISSAVKYFQRMNQIGCAPD 541
            +  +  AV     M +IG  P+
Sbjct: 653 VNHRVFQAVGIIHIMVKIGVVPE 675



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 184/413 (44%), Gaps = 12/413 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y   + AY R GR+ +A      M              ++ A  D  +     QA ++  
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYH---DQAHKVYV 110

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+  G  P+++THT+ +   C       A RL    +R+  ++  V  Y  ++ G    
Sbjct: 111 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL----LRALPHRGAV-AYCTVVCGLYAH 165

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
              + A  L ++M    + PN   +  +++  CK G+   A  L+  + + G + N++ Y
Sbjct: 166 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 225

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  I GLC+ GR+ EA  L+    +     D +TY  L+    K++  ++A+    RM+ 
Sbjct: 226 NIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 284

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PD   Y T+I  +C+   ++E+ +  ++A+  G  P + TY S+I G   +G++  
Sbjct: 285 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 344

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F      G  PD + Y +L+ GLC Q  +  A Q    M  +G  P   T   +  
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
             CK G+ + A +++     K ++    T NTLI   C   ++  A     ++
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 457



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 7/369 (1%)

Query: 140 ATSLISNGNFER--AHEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           AT L+ +  F+     +V  C +++     G ++    +  E    G+       N +V 
Sbjct: 310 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 369

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C  GL+ +A +V +EM   G   D  +Y +++   C+MG +++A   ++  + +G + 
Sbjct: 370 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 429

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T   LI  +C    R  +  A +L+E M   G  P+  T+  +++GLCK G   +  
Sbjct: 430 DVFTFNTLIDGYCK---RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             F +++    + PN  TY  +I  +C+  KM  A  ++ +M ++GL P+  ++ +LIYG
Sbjct: 487 ETFQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C+ G+ E AY L   + ++G +     +N +I     K  +  A ++  +   +  +AD
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY +L+    K A   +A      M+K G  P +  +  +I +     ++ ++     
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665

Query: 497 EAITAGLFP 505
             +  G+ P
Sbjct: 666 IMVKIGVVP 674



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 17/285 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +  +L     +V  M   G+   T T N V+   C+ G V    E F EM  +G
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++  +CR  ++ EA + +  M   G   D  +   LI  FC     G ++
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN---GDLE 553

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ L +++  KG+     T   LI     K     A ++F +++ S  ++ + +TY  +
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML-SKGHRADSYTYRVL 612

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK   ++RA M L  M ++G +P+ +T+  +I          +A  ++ +M K G 
Sbjct: 613 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 672

Query: 399 TP------------NIYAYNAIIDGLCKKGRVQ-EAYELLKKAFQ 430
            P             I A   +++ L KKG +    YE+L +  Q
Sbjct: 673 VPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQ 717


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 4/430 (0%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    ++S F ++ R +  + +  EM    +     T N ++ + C+ G ++ A++    
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV  +  +Y  +V  YC  GRV  AD  L+ M  +    D+ T   LI+  C +G 
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG- 305

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +++A ++ EEMV+KG +P+   +  LIDG C KG  + A     ++++     P + 
Sbjct: 306 --RLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK-GISPTMS 362

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY ++I     E++ + AE +++ ++E+G+ P+  TY  LI G+C+  N ++A+ L D M
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  P    Y +++  L KK R++EA +L KK     +  D I +  L+  H   +  
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K A  L   M +  + PD   + T++   CR+ K++E+ + F E    G+ P   ++ ++
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I GY R G+I  A +    M   G  P  +TY AL+ GLCK  + D A +  + M+ KG+
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 574 SPCEVTRVTL 583
           +P + T  TL
Sbjct: 603 TPDDTTYFTL 612



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 231/456 (50%), Gaps = 9/456 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++   + A E F  M  +GV     +   ++  + ++ R TEA   L A + R  I  +
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNR-TEAAWVLYAEMFRLRIKSS 220

Query: 259 A-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  ++I   C +G    +K+A + +  M   G KPN+ T+  ++ G C  G  E A  
Sbjct: 221 VYTFNIMINVLCKEG---KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +   + R    +P+  TY ++ISG CK+ ++  A  + E M ++GL P+   Y +LI G 
Sbjct: 278 ILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C  GN + A    D M K+G +P +  YN++I  L  + R  EA  ++K+  ++ +  D 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY IL++ + + A  K+A  L   M+ +G+ P    YT+L+    ++ +MKE++  F++
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + G+ P    + ++I G+  + N+  A +  + M+++   PD +T+  ++ G C++ K
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL--WIRTVNT 614
           ++EA + ++ M  +GI P  ++  TL   Y ++GD   A  +  E LD      + T N 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           L++ LC  +   +A     +++ K    D  +   L
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 202/402 (50%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+LK+    V  M  +G+     T N +V   C  G VE A+ +   M  + 
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ +Y  ++   C+ GR+ EA +    M+ +G          LI  FC+KG   ++ 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG---NLD 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A    +EM++KG  P + T+  LI  L  +  T++A    +K ++     P+  TY  +
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA-ECMIKEIQEKGISPDAITYNIL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+     +A +L + M   G+ P   TYTSL++   K    + A DL   +  EG 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   +NA+IDG C    V+ A+ELLK   + ++  D++T+  ++  H ++ + ++A  
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + G+ PD  ++ TLI+ + R+  +K++ +   E +  G  PT  TY +++ G  
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++     A +  + M   G  PD+ TY  LI G+ K +  DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 192/425 (45%), Gaps = 36/425 (8%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           +  ++ + C M R  EA      M ++G +    T   L++ F         + A+ L  
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLK---LNRTEAAWVLYA 210

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM R   K +VYT  ++I+ LCK+G  +KA + F+  + +   KPN+ TY  ++ GYC  
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKA-KDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            ++  A+ +L  MK Q + P++ TY SLI G CK G  E A  + + M ++G  P+   Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +IDG C KG +  A     +  ++ +     TY  L+     +  T +A  +   + +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G++PD   Y  LI  +CR    K++     E + +G+ PTK+TYTS++    +   +  
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A   F+++   G  PD I + ALI G C  S +  A +  + M    + P EVT      
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT------ 503

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
                                      NT+++  C E +V  A   F ++  +    D +
Sbjct: 504 --------------------------FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 646 SLAAL 650
           S   L
Sbjct: 538 SFNTL 542



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 8/277 (2%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            ++ +I   C   R  EA+E      ++ +     T   LLS  LK   T+ A  L+  M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            +  +   ++ +  +I   C++ K+K+++ F     T+G+ P   TY +++ GY   G +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A      M +    PD+ TYG+LISG+CKQ +L+EA + +E M+ KG+ P  V   TL
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C +G+   A    + + KK     + T N+LI  L  E+R   A     ++  K  
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 641 NVDRVSLAALKNA---CYESNKYALFSDLSQRIAEGI 674
           + D ++   L N    C  + K  L  D  + +A GI
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHD--EMLASGI 427



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 4/309 (1%)

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +  LI   C +   + A++    M ++G  P I   N+++    K  R + A+ L  + F
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +++   T+ I+++   K+ + K+A      M  +G+ P+I  Y T++  +C   +++
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            ++          + P   TY S+I G  + G +  A K F+ M Q G  P  + Y  LI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLW 608
            G C +  LD A  + + M+ KGISP   T  +L +  + +Q       +I E  +K + 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 609 IR--TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
               T N LI   C       A L   ++L       + +  +L +   + N+     DL
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 667 SQRI-AEGI 674
            ++I +EG+
Sbjct: 454 FKKITSEGV 462


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 211/427 (49%), Gaps = 4/427 (0%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A ++FDEM   G   D  +Y  ++   C+MG  T A + L  M ++G   +    + +I 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           + C       I +A E L EMV +G  PNV T++ ++ G C  G + +A  LF ++V   
Sbjct: 126 SLCKDKL---ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER- 181

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+  T+  ++ G  KE  +  A+ + E M E+G+ PN NTY +L+ G+C     + A
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L ++M ++GC P++ +YN +I G CK GR+ EA  LL +   + L  D +TY+ L+  
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    + A  L   M   GL PD+  Y+ ++   C+Q  + E+ +  +    + + P 
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              YT +I G    G + +A + F  +   G  PD +TY  +ISGL K    +EAC+ + 
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFR 421

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
            M   G  P   T   +   + + GD++ A  ++E +  + +    +T       E R  
Sbjct: 422 DMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDE 481

Query: 627 MAALFFH 633
           + +LF H
Sbjct: 482 IISLFMH 488



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 4/422 (0%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++  +   ++ +   +  EM   G      T + ++   C++G    A ++  
Sbjct: 47  HVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLK 106

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G   +   Y  ++ + C+   +TEA  +LS M++RG   +  T + ++  FC+  
Sbjct: 107 KMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN-- 164

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G   +A  L ++MV +   P+  T  +L+DGL K+G   +A  +F  ++     +PNV
Sbjct: 165 -LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK-GVEPNV 222

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +TY A++ GYC + +M+ A+ L   M  +G  P+  +Y  LI GHCK G  + A  L+  
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +  TP+   Y+ ++ G C+ GR Q+A +LL++     L  D +TY+I+L    KQ  
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  L   M ++ + P+I  YT LI   C   K++ + + F      G+ P   TYT 
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           MI G L+ G  + A + F+ M   GC P++ TY  +I G  +      A +  E M+G+G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 573 IS 574
            S
Sbjct: 463 FS 464



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 13/420 (3%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  TLT+LI  FC          AF +L  M + G +PN  T + L++GL  K     A 
Sbjct: 9   DVYTLTILINCFCHSN-HDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           +LF ++V+   Y+P+V TY+ +I+G CK      A  LL++M+E+G  PN   Y+++I  
Sbjct: 68  KLFDEMVKM-GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK      A + +  M   G +PN+  Y++I+ G C  GR  EA  L K+  +R +  D
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +T+ IL+    K+    +A  +F  M++ G+ P+++ Y  L+  +C Q +M E++K F 
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             +  G  P+  +Y  +I G+ + G I  A      M+     PD +TY  L+ G C+  
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRT 611
           +  +A +  E M   G+ P  +T   +    CKQG    A  +L+++     +  ++I T
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYT 366

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLS 667
           +  LI+ +C+  ++  A   F  L  K    D V+    ++ L      +    LF D++
Sbjct: 367 I--LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 37/314 (11%)

Query: 327 NYKPNVHTYTAMISGYC-------------------------------------KEEKMN 349
           N +P+V+T T +I+ +C                                      + K+ 
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  L + M + G  P+  TY+++I G CK+G+   A  L+  M ++GC PN+  Y+ II
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           D LCK   + EA E L +   R +  + +TY+ +L        + +A  LF +MV+  + 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD   +  L+    ++  + E++  F+  I  G+ P   TY +++ GY     +  A K 
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F  M + GCAP   +Y  LI G CK  ++DEA      M  K ++P  VT  TL   +C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 590 QGDSATAMIILESL 603
            G    A  +LE +
Sbjct: 305 DGRPQDAQKLLEEM 318



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 43/234 (18%)

Query: 466 AGLNPDIHAYTTLIAAFCR-------------------------------------QKKM 488
           + + PD++  T LI  FC                                      + K+
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            ++ K F E +  G  P   TY+++I G  + G+ + A++  ++M + GC P+ + Y  +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKL 607
           I  LCK   + EA +F   M+ +GISP  VT  ++ + +C  G S  A  + + + ++ +
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 608 WIRTV--NTLIRKLCSEKRVGMAALFFHKLL--GKDQNVDRVSLAALKNACYES 657
              TV  N L+  L  E  +  A   F  ++  G + NV+  + A +   C +S
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN-ALMDGYCSQS 236


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 260/538 (48%), Gaps = 42/538 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ ++ +  +L+E       + + G  +     N ++G    +G VE A  V+ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  +  +  +MV A C+ G++ +   +LS + ++G   D  T   LI+A+  KG  
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL- 285

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-------- 326
             +++AFEL+  M  KG+ P VYT+  +I+GLCK G  E+A  +F +++RS         
Sbjct: 286 --MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 327 --------------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                                     +  P++  +++M+S + +   +++A M    +KE
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            GL+P+   YT LI G+C+ G    A +L + M ++GC  ++  YN I+ GLCK+  + E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +  +R L  D  T TIL+  H K    + A+ LF +M +  +  D+  Y TL+ 
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            F +   +  +++ + + ++  + PT  +Y+ ++      G+++ A + +  M      P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
             +   ++I G C+     +   F E MI +G  P  ++  TL Y + ++ + + A  ++
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643

Query: 601 ESLDKKLW-----IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + ++++       + T N+++   C + ++  A +   K++ +  N DR +   + N 
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 223/447 (49%), Gaps = 6/447 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+++  G ++E F ++  M   G      T N V+   C+ G  E A+EVF EM   G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+++Y+ +++  C+ G V E ++  S M  R  + D    + +++ F   G   ++ 
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG---NLD 392

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A      +   G  P+   +T+LI G C+KG    A  L  ++++      +V TY  +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTI 451

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK + +  A+ L   M E+ L P++ T T LI GHCK+GN + A +L   M ++  
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  YN ++DG  K G +  A E+      +E+    I+Y+IL++    +    +A  
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M+   + P +    ++I  +CR     + E F ++ I+ G  P   +Y ++I G++
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631

Query: 519 RDGNISSAVKYFQRMN--QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           R+ N+S A    ++M   Q G  PD  TY +++ G C+Q+++ EA      MI +G++P 
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
             T   +   +  Q +   A  I + +
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEM 718



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 224/468 (47%), Gaps = 19/468 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI------- 277
           S   M+    R GR+++A   L  M+ R  +     +  L + F + G   S+       
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174

Query: 278 -------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                  ++A E    +  KG+  ++     LI  L + GW E A+ ++ ++ RS     
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS-GVGI 233

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV+T   M++  CK+ KM +    L +++E+G+ P+  TY +LI  +   G  E A++LM
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M  +G +P +Y YN +I+GLCK G+ + A E+  +  +  L  D  TY  LL E  K+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +  +   +F  M    + PD+  ++++++ F R   + ++  +F     AGL P    Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T +I GY R G IS A+     M Q GCA D +TY  ++ GLCK+  L EA + +  M  
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGM 627
           + + P   T   L   +CK G+   AM + + + +K   L + T NTL+        +  
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           A   +  ++ K+     +S + L NA C + +    F    + I++ I
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 158/379 (41%), Gaps = 55/379 (14%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N+K    + +AMI    +  +++ A+  L RM  +  +       SL       G+ +  
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167

Query: 387 YDLM---------------------------------DLMG------------------- 394
           +DL+                                  L+G                   
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   N+Y  N +++ LCK G++++    L +  ++ +  D +TY  L+S +  +   +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   M   G +P ++ Y T+I   C+  K + +++ F E + +GL P   TY S++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G++    K F  M      PD + + +++S   +   LD+A  ++ S+   G+ 
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  V    L   YC++G  + AM +   + ++   + + T NT++  LC  K +G A   
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           F+++  +    D  +L  L
Sbjct: 468 FNEMTERALFPDSYTLTIL 486


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 216/437 (49%), Gaps = 17/437 (3%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           A +    ++    + GR    + +  +M   G      T   ++   C  G    A  +F
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           DEM  + +      Y +++   C   R++EA+     M + G + +  T   ++  +C  
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +K+A EL +EM+  G  PNV T  +LIDGLCK      A R FL  + S    PN
Sbjct: 277 ---AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA-RKFLIDMASFGVVPN 332

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           +  Y  +I GYCK   ++ A  L   +++  +LP+  TY+ LI G C V   E A  L+ 
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K+G  PN   YN +IDG CK+G +++A E+  +  ++ ++ + IT++ L+  + K  
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + + A+GL+  MV  GL PD+ AYT LI    +    KE+ +  +E   AGL P   T +
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 512 SMICGYLRDGNISSAVKYF----------QRMNQIG---CAPDNITYGALISGLCKQSKL 558
            +I G  +DG IS A+K F           + N++    C+P+++ Y ALI GLC   ++
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572

Query: 559 DEACQFYESMIGKGISP 575
            +A +F+  M   G+ P
Sbjct: 573 FKASKFFSDMRCSGLRP 589



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F+E+G ++E   +  +M  + LP + +  N V+    + G  +   +V+ +M
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKM--DVLPAMQAC-NMVLDGLVKKGRFDTMWKVYGDM 184

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ARG   +  +Y  ++   CR G   +A R    M+++         T+LI   C +   
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGES-- 242

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I +A  +   M   G  PN+YT+  ++DG CK    +KA  L+ +++  D   PNV T
Sbjct: 243 -RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML-GDGLLPNVVT 300

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I G CK ++M  A   L  M   G++PN   Y  LI G+CK GN   A  L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K    P+++ Y+ +I GLC   R++EA  LL++  ++    + +TY  L+  + K+   +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ +  +M + G+ P+I  ++TLI  +C+  KM+ +   + E +  GL P    YT++I
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            G+ +DGN   A +  + M + G  P+  T   LI GLCK  ++ +A + + +  G
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 197/413 (47%), Gaps = 17/413 (4%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  AE +F  M   G+  +  +Y  M+  YC++  V +A      ML  G + +  T  +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C       +  A + L +M   G  PN++ +  LIDG CK G   +A  L  ++ 
Sbjct: 304 LIDGLCKTD---EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           + +   P+V TY+ +I G C  ++M  A+ LL+ MK++G LPN  TY +LI G+CK GN 
Sbjct: 361 KHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E+A ++   M ++G  PNI  ++ +IDG CK G+++ A  L  +   + L  D + YT L
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF-------- 495
           +  H K   TK+A  L   M +AGL+P++   + LI   C+  ++ ++ K F        
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT 539

Query: 496 -----QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
                 E   +   P    YT++I G   DG I  A K+F  M   G  PD  T   +I 
Sbjct: 540 TGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQ 599

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           G  +   L +       ++  GI P       LA  Y + G   +A+   E L
Sbjct: 600 GHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 203/433 (46%), Gaps = 8/433 (1%)

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           E+GLVE A  V+ +M    V     +  +++    + GR     +    M+ RGA  +  
Sbjct: 138 EMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV 194

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T   LI   C +G      +AF L +EM+ K   P V  +T+LI GLC +    +A  +F
Sbjct: 195 TYGTLIDGCCRQG---DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            + +R+    PN++TY  M+ GYCK   + +A  L + M   GLLPN  T+  LI G CK
Sbjct: 252 -RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                 A   +  M   G  PNI+ YN +IDG CK G + EA  L  +  + E+  D  T
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+IL+         ++A GL   M K G  P+   Y TLI  +C++  M+++ +   +  
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+ P   T++++I GY + G + +A+  +  M   G  PD + Y ALI G  K     
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTVNTLIRK 618
           EA + ++ M   G+ P   T   L    CK G  + A+ + L            N L R 
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 619 LCSEKRVGMAALF 631
           LCS   V   AL 
Sbjct: 551 LCSPNHVMYTALI 563



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 186/399 (46%), Gaps = 17/399 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + +I  +K+   +  EM  +GL     T   ++   C+   +  A +   +M + G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y  ++  YC+ G ++EA    S +     + D  T ++LI   C       ++
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD---RME 385

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL+EM +KG+ PN  T+  LIDG CK+G  EKA  +  ++      +PN+ T++ +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTL 444

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK  KM  A  L   M  +GLLP+   YT+LI GH K GN + A+ L   M + G 
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELL------------KKAFQREL-QADKITYTILLS 445
            PN++  + +IDGLCK GR+ +A +L                  R L   + + YT L+ 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
                    +A   F  M  +GL PD+     +I    R   +++      + +  G+ P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
               Y  +  GY   G + SA++  + ++ IG    N+ 
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCSNLN 663



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           T   +  +I  +   G +  A+  + +M+ +   P       ++ GL K+ + D   + Y
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVY 181

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSE 622
             M+ +G SP  VT  TL    C+QGD   A  +  E ++KK++   V    LIR LC E
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 623 KRVGMAALFFHKL 635
            R+  A   F  +
Sbjct: 242 SRISEAESMFRTM 254


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 240/531 (45%), Gaps = 49/531 (9%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           F+ +I+M     P I+S  N ++G   ++        ++  M   G+  D  +  +++  
Sbjct: 80  FNHLIDMQPT--PPISS-FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINC 136

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC + +V      L  ML RG   +  T T L+   C       I +A  LL +MVR G+
Sbjct: 137 YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC---LGSRISEATGLLRKMVRMGY 193

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN-----YKPNVHTYTAMISGYCKEEK 347
           +PNV T+  L++GLC  G T  A +L  +++  +       KPN+  Y  +I   CK+  
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +++ + L   MK +G+ P+   Y+S+I+G C  G +E A  L + M  EG  PN+  +N 
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +ID LCK G+++EA  LLK   QR    D  TY  L+     +     A  LF  M   G
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +  D  +Y  LI  +C+  +M E++K ++E +   + PT  TY +++ G  R+G +  A 
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA---------------CQFYESMIG-- 570
             F  M      P++ TY  L+ GLCK + L EA                Q +  +I   
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493

Query: 571 ------------------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
                             +G+ P  +T   + +  CK G    A  +   +++K     +
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            T NTL+R  C    +        ++  KD + D  +++ + +   +  KY
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ GL++  +E+F EM  RG+  D  +Y  ++   C  GR   A    + M+D G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              +  T  +LI A C  G    +++A  LL+ M+++G  P+ +T+  LIDG C +G  +
Sbjct: 304 VHPNVVTFNVLIDALCKAG---KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  LF+ +  S   + +  +Y  +I+GYCK  +M  A+ L   M  + ++P   TY +L
Sbjct: 361 DARDLFVSM-ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G  + G    A++L   M     TP    YN ++DGLCK   + EA EL       + 
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           Q     +  L+    K  + + A  LF R+   GL P++  YT +I   C+  +++ ++ 
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F      G  P   T+ +++ G+ ++  +   V+  Q M +   +PD  T   ++  L 
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLS 599

Query: 554 KQSKLDEACQFYESMIGKG 572
           K  K  E      +   +G
Sbjct: 600 KDEKYREYLHLLPTFPAQG 618



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 156/303 (51%), Gaps = 6/303 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G+++E   ++  M   G    T T N ++   C  G ++ A ++F  M ++G
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  DA SY +++  YC+ GR+ EA +    M+ +  +    T   L+T      FR G +
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL----FREGKV 429

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A+ L  EM      P   T+ +L+DGLCK     +A  LF  L   D ++P++  +  
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD-FQPSIQIFNC 488

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K+  A  L  R+  +GL PN  TYT +I+G CK G  E A DL   M ++G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  +N ++ G C+   +Q+  ELL++  +++   D  T +I++    K  + ++ L
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608

Query: 458 GLF 460
            L 
Sbjct: 609 HLL 611


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 234/476 (49%), Gaps = 9/476 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G    A ++FD+M    V  + +++  ++ A C+ G V EA   L  ++ RG  ++  T 
Sbjct: 165 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 224

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C+ G    + +A  L++ M R    P+V T+  LI GLCKK   ++A   +L+
Sbjct: 225 NIWIRGLCEAG---RLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMH-YLR 279

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            + +    P+  TY  +I GYCK   +  A  LL+    +G +P+  TY SLI G C  G
Sbjct: 280 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 339

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + ERA +L +    +G  P+I  YN+++ GLC +G +  A +++ +  +     D  TY 
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           I+++   K      A  +    +  G  PD+  + TLI  +C++ K+  + +  +     
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TY S++ G  + G ++   + FQ M   GC P+ ITY  LI   C+ +K++EA
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
            +    M  +G+ P  V+  TL Y +C+ GD   A ++ + L++K +     T NTLI  
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEG 673
              +  + MA   F ++L K    D  +   L   +C  +N    +  L + I +G
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 635



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 203/416 (48%), Gaps = 5/416 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E GRL E   +V  M    +P +  T N ++   C+  + + A      M  +G 
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++  YC++  V EA   L   + +G + D  T   LI   C +G    +++
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVER 343

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A EL  E   KG KP++  +  L+ GLC +G    A ++  ++   +   P++ TY  +I
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE-EGCHPDIQTYNIVI 402

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK   ++ A +++     +G LP+  T+ +LI G+CK    + A  L++ M + G  
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+   YN++++GLCK G+V E  E  ++   +    + ITY IL+    +  + ++A  +
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M + GL+PD  ++ TLI  FCR   ++ +   FQ+    G   T +T+ ++I  +  
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             N+  A K F  M   G   D+ TY  LI G CK + +D A      MI KG  P
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 234/473 (49%), Gaps = 8/473 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ ++   G+ +   T N  +   CE G +  A  + D M A  V  D  +Y
Sbjct: 200 GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 258

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+     EA  +L  M+++G + D+ T   +I  +C       +++A ELL++
Sbjct: 259 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM---VQEATELLKD 315

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            V KG+ P+  T+  LI+GLC +G  E+A  LF +  ++   KP++  Y +++ G C + 
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKPDIVVYNSLVKGLCLQG 374

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  ++  M E+G  P+  TY  +I G CK+GN   A  +M+    +G  P+++ +N
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG CK+ ++  A +L+++ ++  +  D ITY  +L+   K  +  +    F  M+  
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G +P+   Y  LI  FCR  KM+E+ K   +    GL P   ++ ++I G+ R+G++  A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              FQ++ + G +    T+  LI     +  +  A + ++ M+ KG      T   L   
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
            CK  +   A + L  + KK +I +++T   +I  L    RV  A    H ++
Sbjct: 615 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 667



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 172/383 (44%), Gaps = 4/383 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +I  ++E   ++ +    G      T   ++   C  G VE A E+F+E  A+G
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  +V   C  G +  A + ++ M + G   D  T  ++I   C     G+I 
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK---MGNIS 412

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  ++ + + KG+ P+V+T   LIDG CK+   + A +L  ++       P+  TY ++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSV 471

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK  K+N      + M  +G  PN  TY  LI   C+    E A  ++  M +EG 
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  ++N +I G C+ G ++ AY L +K  ++   A   T+  L+     +     A  
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+  G   D + Y  LI   C+   +  +     E I  G  P+  T+  +I    
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 519 RDGNISSAVKYFQRMNQIGCAPD 541
            +  +  AV     M +IG  P+
Sbjct: 652 VNHRVFQAVGIIHIMVKIGVVPE 674



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 193/437 (44%), Gaps = 12/437 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y   + AY R GR+ +A      M              ++ A  D  +     QA ++  
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYH---DQAHKVYV 109

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+  G  P+++THT+ +   C       A RL    +R+  ++  V  Y  ++ G    
Sbjct: 110 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL----LRALPHRGAV-AYCTVVCGLYAH 164

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
              + A  L ++M    + PN   +  +++  CK G+   A  L+  + + G + N++ Y
Sbjct: 165 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 224

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  I GLC+ GR+ EA  L+    +     D +TY  L+    K++  ++A+    RM+ 
Sbjct: 225 NIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 283

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  PD   Y T+I  +C+   ++E+ +  ++A+  G  P + TY S+I G   +G++  
Sbjct: 284 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 343

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++ F      G  PD + Y +L+ GLC Q  +  A Q    M  +G  P   T   +  
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             CK G+ + A +++     K ++    T NTLI   C   ++  A     ++       
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463

Query: 643 DRVSLAALKNACYESNK 659
           D ++  ++ N   ++ K
Sbjct: 464 DTITYNSVLNGLCKAGK 480



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 7/369 (1%)

Query: 140 ATSLISNGNFER--AHEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           AT L+ +  F+     +V  C +++     G ++    +  E    G+       N +V 
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 368

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C  GL+ +A +V +EM   G   D  +Y +++   C+MG +++A   ++  + +G + 
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 428

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T   LI  +C    R  +  A +L+E M   G  P+  T+  +++GLCK G   +  
Sbjct: 429 DVFTFNTLIDGYCK---RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             F +++    + PN  TY  +I  +C+  KM  A  ++ +M ++GL P+  ++ +LIYG
Sbjct: 486 ETFQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C+ G+ E AY L   + ++G +     +N +I     K  +  A ++  +   +  +AD
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY +L+    K A   +A      M+K G  P +  +  +I +     ++ ++     
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664

Query: 497 EAITAGLFP 505
             +  G+ P
Sbjct: 665 IMVKIGVVP 673



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 17/285 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +  +L     +V  M   G+   T T N V+   C+ G V    E F EM  +G
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++  +CR  ++ EA + +  M   G   D  +   LI  FC     G ++
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN---GDLE 552

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ L +++  KG+     T   LI     K     A ++F +++ S  ++ + +TY  +
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML-SKGHRADSYTYRVL 611

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK   ++RA M L  M ++G +P+ +T+  +I          +A  ++ +M K G 
Sbjct: 612 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 671

Query: 399 TP------------NIYAYNAIIDGLCKKGRVQ-EAYELLKKAFQ 430
            P             I A   +++ L KKG +    YE+L +  Q
Sbjct: 672 VPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQ 716


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 241/522 (46%), Gaps = 22/522 (4%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +C   SF+        F+ ++ M  N  P IT   N+++     +   +    ++ +M  
Sbjct: 76  KCKGGSFSNFDDALAYFNQMVHM--NPFPCITQ-FNQLLAALVRMKHYDSVVSIYRKMEF 132

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            GV     +  +++   C +  V      L  +   G      T   LI   C     G 
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLC---IEGR 189

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +A E L+ ++ +G++P VYTHT++++GLCK G T  A     K+V  D  +P V +Y+
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD-CEPEVVSYS 248

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK   +N A  L   M+  G+ P   TY SLIYG C  G +++A  L   M + 
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++  ++ ++D LCK+G V EA  +  K  Q  ++ D +TY+ L+    K +  K++
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L   M+   + PD+  ++  +  FC++  + E++      I  GL P   TY S++ G
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDG 428

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y     +  A K F  M   GCAPD ++Y  LI G CK  ++DEA Q ++ M  KG++P 
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW-------IRTVNTLIRKLCSEKRVGMAA 629
            +T  TL    C+ G    A    + L KK+        + T +TL+   C    +  A 
Sbjct: 489 SITHTTLISGLCQAGRPYAA----KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544

Query: 630 LFFHKL----LGKDQNVDRVSLAALKNACYESNKYALFSDLS 667
             F  L    L  +  + ++ L  +  A    +   LFS LS
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLS 586



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 209/436 (47%), Gaps = 33/436 (7%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
           GFS++ ++   G      T N ++   C  G +  A E  D + +RG      ++ ++V 
Sbjct: 158 GFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVN 217

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------ 273
             C++G+ + A  W+  M++     +  + +++I + C                      
Sbjct: 218 GLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISP 277

Query: 274 --------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
                          G  KQA  L +EM+    KP+V T ++L+D LCK+G   +A  +F
Sbjct: 278 TVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVF 337

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            K+++    +P++ TY+++I G CK      +  LL  M  + + P+  T++  +   CK
Sbjct: 338 GKMIQI-AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK 396

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G    A  +++LM + G  PN+  YN+++DG C   ++ EA ++      +    D ++
Sbjct: 397 KGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y IL+  + K     +A  LF  M   GL P+   +TTLI+  C+  +   +++ F++  
Sbjct: 457 YNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           + G  P   TY++++ G+ + G++  A+  F+ + +    P+++    L+ G+CK  KL+
Sbjct: 517 SHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLE 576

Query: 560 EACQFYESMIGKGISP 575
           +A + + S+  + + P
Sbjct: 577 DAKELFSSLSIEELQP 592



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+  LV  A ++F  M + G+     +Y  ++   C  G+  +A      ML+  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-WT 312
              D  T ++L+ A C +G    + +A  +  +M++   +P++ T++ LI G+CK   W 
Sbjct: 310 MKPDVVTFSILVDALCKEGV---VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E +    L  + S N +P+V T++  +  +CK+  ++ A+ ++  M E+GL PN  TY S
Sbjct: 367 ESS--TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+ G+C     + A  + D+M  +GC P++ +YN +I G CK  R+ EA +L  +   + 
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L  + IT+T L+S   +      A  LF +M   G  PD+  Y+TL++ FC+   + E+ 
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             F+    + L P       ++ G  + G +  A + F  ++     PD
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 4/306 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ K+   +  EM    +     T + +V   C+ G+V  A  VF +M    +  D  +Y
Sbjct: 293 GQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY 352

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+     E+   L+ ML R    D  T ++ +  FC KG    + +A  ++  
Sbjct: 353 SSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM---VSEAQSIINL 409

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +G +PNV T+  L+DG C     ++A ++F  ++ +    P+V +Y  +I GYCK E
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF-DIMVNKGCAPDVLSYNILIKGYCKSE 468

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A+ L + M  +GL PN+ T+T+LI G C+ G    A +L   MG  GC P++  Y+
Sbjct: 469 RIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYS 528

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G CK G + EA  L +   + +L+ + +   ILL    K  + + A  LF  +   
Sbjct: 529 TLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIE 588

Query: 467 GLNPDI 472
            L PD+
Sbjct: 589 ELQPDV 594


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 4/430 (0%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    ++S F ++ R +  + +  EM    +     T N ++ + C+ G ++ A++    
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV  +  +Y  +V  YC  GRV  AD  L+ M  +    D+ T   LI+  C    
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK--- 303

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           +G +++A ++ EEMV+KG +P+   +  LIDG C KG  + A     ++++     P + 
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK-GISPTMS 362

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY ++I     E++ + AE +++ ++E+G+ P+  TY  LI G+C+  N ++A+ L D M
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  P    Y +++  L KK R++EA +L KK     +  D I +  L+  H   +  
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K A  L   M +  + PD   + T++   CR+ K++E+ + F E    G+ P   ++ ++
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I GY R G+I  A +    M   G  P  +TY AL+ GLCK  + D A +  + M+ KG+
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 574 SPCEVTRVTL 583
           +P + T  TL
Sbjct: 603 TPDDTTYFTL 612



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 231/456 (50%), Gaps = 9/456 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++   + A E F  M  +GV     +   ++  + ++ R TEA   L A + R  I  +
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNR-TEAAWVLYAEMFRLRIKSS 220

Query: 259 A-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  ++I   C +G    +K+A + +  M   G KPN+ T+  ++ G C  G  E A  
Sbjct: 221 VYTFNIMINVLCKEG---KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +   + R    +P+  TY ++ISG CK+ ++  A  + E M ++GL P+   Y +LI G 
Sbjct: 278 ILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C  GN + A    D M K+G +P +  YN++I  L  + R  EA  ++K+  ++ +  D 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY IL++ + + A  K+A  L   M+ +G+ P    YT+L+    ++ +MKE++  F++
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + G+ P    + ++I G+  + N+  A +  + M+++   PD +T+  ++ G C++ K
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL--WIRTVNT 614
           ++EA + ++ M  +GI P  ++  TL   Y ++GD   A  +  E LD      + T N 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           L++ LC  +   +A     +++ K    D  +   L
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+LK+    V  M  +G+     T N +V   C  G VE A+ +   M  + 
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ +Y  ++   C+ GR+ EA +    M+ +G          LI  FC+KG   ++ 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG---NLD 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A    +EM++KG  P + T+  LI  L  +  T++A    +K ++     P+  TY  +
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA-ECMIKEIQEKGISPDAITYNIL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+     +A +L + M   G+ P   TYTSL++   K    + A DL   +  EG 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  +NA+IDG C    V+ A+ELLK   + ++  D++T+  ++  H ++ + ++A  
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + G+ PD  ++ TLI+ + R+  +K++ +   E +  G  PT  TY +++ G  
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++     A +  + M   G  PD+ TY  LI G+ K +  DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 192/425 (45%), Gaps = 36/425 (8%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           +  ++ + C M R  EA      M ++G +    T   L++ F         + A+ L  
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLK---LNRTEAAWVLYA 210

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM R   K +VYT  ++I+ LCK+G  +KA + F+  + +   KPN+ TY  ++ GYC  
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKA-KDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            ++  A+ +L  MK Q + P++ TY SLI G CK G  E A  + + M ++G  P+   Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +IDG C KG +  A     +  ++ +     TY  L+     +  T +A  +   + +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G++PD   Y  LI  +CR    K++     E + +G+ PTK+TYTS++    +   +  
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A   F+++   G  PD I + ALI G C  S +  A +  + M    + P EVT      
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT------ 503

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
                                      NT+++  C E +V  A   F ++  +    D +
Sbjct: 504 --------------------------FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 646 SLAAL 650
           S   L
Sbjct: 538 SFNTL 542



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 10/331 (3%)

Query: 348 MNRAEMLLE---RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           MNRA+   E    MKE+G+LP   T  SL+    K+   E A+ L   M +     ++Y 
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N +I+ LCK+G++++A + +       ++ + +TY  ++  +      + A  +   M 
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +  + PD   Y +LI+  C+Q +++E+ K F+E +  GL P+   Y ++I G+   GN+ 
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A  Y   M + G +P   TY +LI  L  + + DEA    + +  KGISP  +T   L 
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 585 YEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             YC+  ++  A ++ + +     K   +T  +L+  L  + R+  A   F K+  +   
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 642 VDRVSLAALKNA-CYESN---KYALFSDLSQ 668
            D +   AL +  C  SN    + L  D+ +
Sbjct: 464 PDVIMFNALIDGHCSNSNVKGAFELLKDMDR 494



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 8/277 (2%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            ++ +I   C   R  EA+E      ++ +     T   LLS  LK   T+ A  L+  M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            +  +   ++ +  +I   C++ K+K+++ F     T+G+ P   TY +++ GY   G +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A      M +    PD+ TYG+LISG+CKQ +L+EA + +E M+ KG+ P  V   TL
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C +G+   A    + + KK     + T N+LI  L  E+R   A     ++  K  
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 641 NVDRVSLAALKNA---CYESNKYALFSDLSQRIAEGI 674
           + D ++   L N    C  + K  L  D  + +A GI
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHD--EMLASGI 427



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 4/309 (1%)

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +  LI   C +   + A++    M ++G  P I   N+++    K  R + A+ L  + F
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +++   T+ I+++   K+ + K+A      M  +G+ P+I  Y T++  +C   +++
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            ++          + P   TY S+I G  + G +  A K F+ M Q G  P  + Y  LI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLW 608
            G C +  LD A  + + M+ KGISP   T  +L +  + +Q       +I E  +K + 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 609 IR--TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
               T N LI   C       A L   ++L       + +  +L +   + N+     DL
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 667 SQRI-AEGI 674
            ++I +EG+
Sbjct: 454 FKKITSEGV 462


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 226/453 (49%), Gaps = 7/453 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +F  M   G+ ++  +  +++ +YC + ++  A    + +L  G   D  T T LI   
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C     G +K++    + +V +G K +  ++  LI+GLCK G T  A RL L+ +  +  
Sbjct: 130 C---LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRL-LRKIEGEIC 185

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V  Y  +I G CK++ +  A  L   M E+ + PN  TYTSLIYG C VG  ++A+ 
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L++ M  +   PN+  +N ++DGLCK+G+++EA  L+    +  +  D  TY  L+  + 
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              E  +A  +F  M + G+  D+H+Y+ +I+   + K + E+   F+      + P   
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV 365

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+S+I G  + G I+SA+KY   M+  G  P+ ITY +LI  LCK  ++D+A    + +
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
             +GI     T   L    CK G    A  + + L  K   + + T + +I  LC E   
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
             A     K+  K    D ++   + NA +E +
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKD 518



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++KE  +    + + G+ L   +   ++   C++G    A  +  ++       D   Y
Sbjct: 133 GQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMY 192

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+   V +A      M ++    +  T T LI  FC     G + +AF LL E
Sbjct: 193 NTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFC---IVGQLDKAFGLLNE 249

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV K   PNV T   L+DGLCK+G   +A  L   +++ +   P+V TY A++ GY   +
Sbjct: 250 MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMK-EGVGPDVFTYNALMDGYFLVK 308

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +  +A+ +   M + G+  + ++Y+ +I G  K+   + A DL + M  E   P++ AY+
Sbjct: 309 EAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYS 368

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLCK GR+  A + + +   R    + ITYT L+    K  +  +A+ L  ++   
Sbjct: 369 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ 428

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+  +++ Y  L+   C+  ++ +++K FQ+ +  G      TY+ MI G  ++     A
Sbjct: 429 GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 488

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +    +M   GC PD I Y  +I+   ++   D+A +    MI
Sbjct: 489 LTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  +G+L + F ++ EM    +     T N +V   C+ G +  A+ +   M   G
Sbjct: 230 LIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEG 289

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  Y  +    +A    + M   G   D  + +++I+          + 
Sbjct: 290 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKM---LD 346

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L E M  +   P+V  ++ LIDGLCK G    A + ++  +      PNV TYT++
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK-YVDEMHDRGQPPNVITYTSL 405

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK  ++++A  LL+++K+QG+  N  TY  L+ G CK G    A  +   +  +G 
Sbjct: 406 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  Y+ +I+GLCK+    EA  LL K   +    D I Y  +++   ++    +A  
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEK 525

Query: 459 LFCRMV 464
           L   M+
Sbjct: 526 LLREMI 531



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           M++ R +   ++PN+    S  + H  + N   A D  + M +    P I  +  I+  L
Sbjct: 1   MVILRFRFHSIIPNSTLLLSHTHFH-SLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSL 59

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            K         L ++     +Q++ IT  IL++ +    +   A  +F +++K G  PDI
Sbjct: 60  VKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDI 119

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YTTLI   C   ++KES  F    ++ G+     +Y ++I G  + G    A++  ++
Sbjct: 120 ITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK 179

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG- 591
           +    C PD + Y  +I GLCK   + +A   Y  M  K + P  VT  +L Y +C  G 
Sbjct: 180 IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQ 239

Query: 592 -DSATAMI---ILESLDKKLWIRTVNTLIRKLCSEKRV----GMAALFFHKLLGKD 639
            D A  ++   +L++++    + T NTL+  LC E ++     + A+   + +G D
Sbjct: 240 LDKAFGLLNEMVLKNVNPN--VCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+      V EM + G P    T   ++   C+   V+ A  +  ++  +G
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+  +Y ++V   C+ GR+T+A +    +L +G  +D  T +++I   C +       
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESL---FD 486

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL +M  KG  P+   +  +I+   +K   +KA +L  +++   +YK N  T    
Sbjct: 487 EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDTCDQY 546

Query: 339 ISGYCK 344
               CK
Sbjct: 547 DEFICK 552


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 218/435 (50%), Gaps = 10/435 (2%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           ++ +M + G+  +  +  +++ ++C + R+  A   L  +L  G     AT T LI   C
Sbjct: 76  LYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 135

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                G I +A +L ++M  +G++P+V T+  LI+GLCK G T  A R FL+ +   N +
Sbjct: 136 ---VEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR-FLRSMEQRNCR 191

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P V  Y+ +I   CK+ ++  A  L   M  +G+ PN  TY+SLI+G C +G+++ A  L
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M      P+   +N ++D LCK+G V +A+ ++    Q +L+ D +TY  L+  H  
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           ++E  + + +F  MV+ G  P + +YTTLI  +C+ + M ++   F+E    GL P   T
Sbjct: 312 RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y ++I G    G +  A+  F  M   G  PD +TY  L   LCK  +L EA    + + 
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
           G  + P       +    C+ G+   A  +   L  K     +RT   +I  LC +  + 
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 491

Query: 627 MAALFFHKLLGKDQN 641
            A+  F ++   D+N
Sbjct: 492 EASKLFGEM---DEN 503



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 221/465 (47%), Gaps = 38/465 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++SF  + RL   FS++ ++   G    T+T   ++   C  G +  A ++FD+M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y  ++   C++G  + A R+L +M  R         + +I + C      
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR--- 208

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR----------- 324
            + +A  L  +M+ KG  PN +T++ LI GLC  G  ++A RLF  ++            
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268

Query: 325 -----------------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                                    + KP+V TY +++ G+C   +M +   + + M  +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G +P+  +YT+LI G+CK+   ++A  L + M ++G  P+   YN +I GLC  GR+++A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L  +        D +TY IL     K     +A+ L   +    L+PDIH Y+ ++  
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDG 448

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            CR  +++ +   F +  + GL P   TYT MI G  + G ++ A K F  M++ GC+P+
Sbjct: 449 MCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPN 508

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
             TY  +  G  + ++   A Q ++ M+ +G S  +V+  TL  E
Sbjct: 509 ACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS-IDVSTTTLLVE 552



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 185/365 (50%), Gaps = 10/365 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F +M A+G+  +  +Y  ++   C +G   EA R   AM+ R  + D  T   L+ 
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C +G    + +A  +++ M++   KP+V T+  L+DG C +    K   +F  +VR  
Sbjct: 273 ALCKEGM---VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK- 328

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V +YT +I+GYCK + M++A  L E M +QGL+P+T TY +LI+G C VG    A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L   M   G  P++  Y  + D LCK  R+ EA  LLK      L  D   Y+I++  
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDG 448

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +  E + A  LF ++   GL+PD+  YT +I   C+Q  + E+ K F E    G  P 
Sbjct: 449 MCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPN 508

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA----- 561
             TY  +  G+LR+     A++ FQ M   G + D ++   L+  +     LD++     
Sbjct: 509 ACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID-VSTTTLLVEMLSDDGLDQSVKQIL 567

Query: 562 CQFYE 566
           C+F +
Sbjct: 568 CEFVQ 572



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 4/389 (1%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +I  A  L   M+R    P++   + L+  + +         L+ K + S     N +T 
Sbjct: 34  TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLY-KQMDSFGIPHNTYTL 92

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+ +C   ++  A  +L  + + G  P+T T+T+LI G C  G    A  L D M  
Sbjct: 93  NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EG  P++  Y  +I+GLCK G    A   L+   QR  +   + Y+ ++    K  +  +
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF  M+  G++P+   Y++LI   C     KE+ + F   I   + P + T+ +++ 
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              ++G +  A      M Q    PD +TY +L+ G C +S++ +    +++M+ KG  P
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP 332

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFF 632
             ++  TL   YCK      AM + E + ++  I    T NTLI  LC   R+  A   F
Sbjct: 333 SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNKYA 661
           H+++   Q  D V+   L +   ++++ A
Sbjct: 393 HEMVVYGQIPDLVTYRILFDYLCKNHRLA 421



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 3/278 (1%)

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            V   + A  L + M +    P+I  ++ ++  + +         L K+     +  +  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T  IL++          A  +   ++K G  P    +TTLI   C + K+ E+ + F + 
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   TY ++I G  + GN S+A+++ + M Q  C P  + Y  +I  LCK  +L
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTL 615
            EA   +  M+ KGISP   T  +L +  C  G    A+ +  ++  +  +    T NTL
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +  LC E  V  A      ++  D   D V+  +L + 
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+ L       AL LF RM++    P I  ++ L+ +  R K        +++  + G+ 
Sbjct: 27  SKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIP 86

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
               T   +I  +     +  A      + ++G  P   T+  LI GLC + K+ EA Q 
Sbjct: 87  HNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQL 146

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCS 621
           ++ M G+G  P  +T  TL    CK G+++TA+  L S++++    TV   +T+I  LC 
Sbjct: 147 FDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK 206

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           ++++  A   F  +L K  + +  + ++L
Sbjct: 207 DRQLTEALSLFSDMLAKGISPNNFTYSSL 235



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I   N +    +   ++      G L+    +  ++++ GL     T   ++   C+ G
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L+  A ++F EM   G   +A +Y L+   + R      A +    ML RG  +D +T T
Sbjct: 489 LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTT 548

Query: 263 LLITAFCDKGFRGSIKQ 279
           LL+    D G   S+KQ
Sbjct: 549 LLVEMLSDDGLDQSVKQ 565



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 3/139 (2%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           L    I  A+  F RM ++   P  + +  L++ + +          Y+ M   GI    
Sbjct: 30  LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            T   L   +C       A  +L  + K  +     T  TLIR LC E ++G A   F K
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149

Query: 635 LLGKDQNVDRVSLAALKNA 653
           + G+    D ++   L N 
Sbjct: 150 MTGEGFQPDVLTYGTLING 168


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 232/488 (47%), Gaps = 26/488 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +M+C    F    +L    S   ++T  G      T + ++   C    +  A ++F +M
Sbjct: 119 LMKC----FCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
           C   V     ++  ++   CR GRV EA   L  ML+ G   +  T   ++   C  G  
Sbjct: 175 CKPNVV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230

Query: 275 GSIKQAFELLEEMVRKGWKPNVYT-----HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            S       +EE+     KPNV        T +I+G C  G   +A +L  +++      
Sbjct: 231 VSALNLLRKMEEVSH--IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V TY A+I+ + KE K   AE L + M  +G++P+T TY+S+I G CK    + A  +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
             LM  +GC+P+I  +N +I G C+  RV +  +LL +  +  L A+ ITYT L+    +
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-------- 501
             +   A  L   MV +G+ P++    TL+   C   K+K++ + F+    +        
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468

Query: 502 ---GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P  +TY  +I G + +G    A + ++ M   G  PD ITY ++I GLCKQS+L
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
           DEA Q ++SM  K  SP  VT  TL   YCK G     + +   + ++  +    T I  
Sbjct: 529 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588

Query: 619 LCSEKRVG 626
           +   ++VG
Sbjct: 589 IHGFRKVG 596



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 247/519 (47%), Gaps = 39/519 (7%)

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI----- 166
           G +  L F    + F+   H +     C    IS    +  H++ +  V +F  +     
Sbjct: 137 GKITKLGFHPTVVTFSTLLHGL-----CVEDRISEA-LDLFHQMCKPNVVTFTTLMNGLC 190

Query: 167 --GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG-------LVEYAEEVFDEMCAR 217
             GR+ E  +++  M  +GL     T   +V   C++G       L+   EEV   +   
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV-SHIKPN 249

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGS 276
            V         M+  +C  GR +EA + L  ML+R  I  D  T   LI AF  +G    
Sbjct: 250 VVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG---K 306

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
             +A EL +EM+ +G  P+  T++ +IDG CK+   + A  +F  L+ +    P++ T+ 
Sbjct: 307 FFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPDIITFN 365

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+GYC+ ++++    LL  M E GL+ NT TYT+LI+G C+VG+   A DL+  M   
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE------------LQADKITYTILL 444
           G  PN+   N ++DGLC  G++++A E+ K A Q+             ++ D  TY IL+
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDIDASHPFNGVEPDVQTYNILI 484

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S  + + +  +A  L+  M   G+ PD   Y ++I   C+Q ++ E+ + F    +    
Sbjct: 485 SGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFS 544

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T+T++I GY + G +   ++ F  M + G   + ITY  LI G  K   ++ A   
Sbjct: 545 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDI 604

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           ++ M+  G+ P  +T   +      + +   A+ +LE L
Sbjct: 605 FQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 50/413 (12%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A +L  +MVR    P+V     L+  + + G  +    L  K+        N +++
Sbjct: 58  GLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKM-EMRRVPCNAYSF 116

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T ++  +C   K+  A     ++ + G  P   T+++L++G C       A DL   M  
Sbjct: 117 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM-- 174

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
             C PN+  +  +++GLC++GRV EA  LL +  +  LQ ++ITY  ++    K  +T  
Sbjct: 175 --CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 232

Query: 456 ALGL----------------------------FCR--------------MVKAGLNPDIH 473
           AL L                            FC               + +  ++PD+ 
Sbjct: 233 ALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVV 292

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  LI AF ++ K  E+E+ + E +  G+ P+  TY+SMI G+ +   + +A   F  M
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              GC+PD IT+  LI+G C+  ++D+  +    M   G+    +T  TL + +C+ GD 
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             A  +L+ +        + T NTL+  LC   ++  A   F  +     ++D
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 49/341 (14%)

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           SG+ + + +  A  L   M     LP+   +  L+    ++G  +    L   M      
Sbjct: 51  SGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N Y++  ++   C   ++  A     K  +       +T++ LL     +    +AL L
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDL 170

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M K    P++  +TTL+   CR+ ++ E+       +  GL P + TY +++ G  +
Sbjct: 171 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 226

Query: 520 DGNISSAVKYFQRMNQIG------------------------------------------ 537
            G+  SA+   ++M ++                                           
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSAT 595
            +PD +TY ALI+   K+ K  EA + Y+ M+ +GI P  +T  ++   +CKQ   D+A 
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346

Query: 596 AMIILESLDK-KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            M  L +       I T NTLI   C  KRV       H++
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 387



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 22/277 (7%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   E A DL   M +    P++  +  ++  + + GR+     L +K   R +  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           +  ++TIL+      ++   AL  F ++ K G +P +  ++TL+   C + ++ E+   F
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G +  AV    RM + G  P+ ITYG ++ G+CK 
Sbjct: 172 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 556 S----------KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLD 604
                      K++E      +++   I P E  R  +   +C  G  + A  +L E L+
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVV---IWPLE-RRTCMINGFCSSGRWSEAQQLLQEMLE 283

Query: 605 KKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +K     + T N LI     E +   A   + ++L +
Sbjct: 284 RKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 7/173 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S     G+  E   +  EM + G+   T T N V+   C+   ++ A ++FD M ++ 
Sbjct: 483 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              +  ++  ++  YC+ GRV +       M  RG + +  T   LI      GFR  G+
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI-----HGFRKVGN 597

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
           I  A ++ +EM+  G  P+  T   ++ GL  K   ++A  +   L  S  Y+
Sbjct: 598 INGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSVGYQ 650


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 235/479 (49%), Gaps = 9/479 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L E   ++ +M +        + N ++ + C+ G +  A ++  +M   G+  + +++ 
Sbjct: 227 KLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFN 286

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V  YC++G + EA + +  M     + D  T  +LI   C  G    I +AF L +EM
Sbjct: 287 ILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDG---KIDEAFRLKDEM 343

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                 P+V T+  LI+G      + K F L  K+      KPN  TY  ++  Y KE K
Sbjct: 344 ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM-EGKGVKPNAVTYNVVVKWYVKEGK 402

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A   L +M+E G  P+  T+ +LI G+CK G    A+ +MD M ++G   N    N 
Sbjct: 403 MDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           I+  LC + ++ +AY+LL  A +R    D+++Y  L+  + K  ++ +A+ L+  M +  
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P I  Y T+I   C   K  +S     E + +GL P + TY ++I GY R+G +  A 
Sbjct: 523 IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAF 582

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           ++  +M +    PD  T   L+ GLC +  LD+A + + + I KG +   VT  T+    
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642

Query: 588 CKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQN 641
           CK+     A  +L  +++K       T N ++  L    R+  A  F  +++  GK Q+
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 229/472 (48%), Gaps = 7/472 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  ++ +F ++   GV  + +++ +++   C   +++EA   +  M D     DN +   
Sbjct: 193 VYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT 252

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++   C K   G + +A +LL +M   G  PN  T  +L+ G CK GW ++A ++ + L+
Sbjct: 253 ILDVLCKK---GKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV-IDLM 308

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +N  P+V TY  +I G CK+ K++ A  L + M+   LLP+  TY +LI G     + 
Sbjct: 309 AQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            + ++L+D M  +G  PN   YN ++    K+G++  A   L+K  +     D +T+  L
Sbjct: 369 LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++ + K     +A  +   M + GL  +     T++   C ++K+ ++ K    A   G 
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F  + +Y ++I GY +DG    A+K +  M +    P  ITY  +I GLC   K D++  
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
               ++  G+ P E T  T+   YC++G    A      + KK +   + T N L+R LC
Sbjct: 549 KLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLC 608

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           +E  +  A   F+  + K + +D V+   + +   + +++    DL   + E
Sbjct: 609 TEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 204/411 (49%), Gaps = 8/411 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L E   ++++M NNGL    +T N +V   C+LG ++ A +V D M    V  D  +Y
Sbjct: 261 GKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA--FCDKGFRGSIKQAFELL 284
            +++   C+ G++ EA R    M +   + D  T   LI     C    +G     FEL+
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKG-----FELI 375

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           ++M  KG KPN  T+ V++    K+G  + A     K+  S  + P+  T+  +I+GYCK
Sbjct: 376 DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES-GFSPDCVTFNTLINGYCK 434

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +++ A  +++ M  +GL  N+ T  ++++  C     + AY L+    K G   +  +
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +I G  K G+  EA +L  +  ++E+    ITY  ++       +T Q++     ++
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           ++GL PD   Y T+I  +CR+ +++++ +F  + +     P   T   ++ G   +G + 
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            A+K F      G A D +TY  +ISGLCK+ + +EA      M  K + P
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 206/450 (45%), Gaps = 31/450 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG--IACELGLVEYAEEVFDEMCA 216
           ++    + G++ E F +  EM N  L     T N ++     C   L  +  E+ D+M  
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGF--ELIDKMEG 380

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV  +A +Y ++V  Y + G++  A   L  M + G   D  T   LI  +C  G    
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAG---R 437

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +AF +++EM RKG K N  T   ++  LC +   + A++L     +   +   V +Y 
Sbjct: 438 LSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV-SYG 496

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I GY K+ K   A  L + MKE+ ++P+  TY ++I G C  G  +++ D ++ + + 
Sbjct: 497 TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES 556

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+   YN II G C++G+V++A++   K  ++  + D  T  ILL     +    +A
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L LF   +  G   D   Y T+I+  C++ + +E+     E     L P   TY +++  
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676

Query: 517 YLRDGNISSAVKYFQRMNQIG-----------------------CAPDNITYGALISGLC 553
               G +  A ++  R+ + G                         P+++T+   I+ LC
Sbjct: 677 LADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELC 736

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            Q K  +A    +    KGI+  + T ++L
Sbjct: 737 TQGKYKDAMHMVQESTQKGITLHKSTYISL 766



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 178/361 (49%), Gaps = 16/361 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + GRL E F M+ EM+  GL + + TLN ++   C    ++ A ++      RG
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  +++ Y + G+  EA +    M ++  I    T   +I   C     G   
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC---HSGKTD 544

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q+ + L E++  G  P+  T+  +I G C++G  EKAF+   K+V+  ++KP++ T   +
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK-SFKPDLFTCNIL 603

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C E  +++A  L      +G   +  TY ++I G CK   FE A+DL+  M ++  
Sbjct: 604 LRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKL 663

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y YNAI+  L   GR++EA E + +  ++    D+   TI L++   ++ ++ +  
Sbjct: 664 GPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ---TISLNKRKIESSSETS-- 718

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                     +P+   ++  I   C Q K K++    QE+   G+   K TY S++ G +
Sbjct: 719 -------QESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLI 771

Query: 519 R 519
           +
Sbjct: 772 K 772



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 159/331 (48%), Gaps = 12/331 (3%)

Query: 329 KPNVHTYTAMISG---YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           KPN+ T   +I+    Y  +  +  ++ +   + + G+  NTNT+  LIYG C       
Sbjct: 171 KPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSE 230

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L+  M    C P+  +YN I+D LCKKG++ EA +LL       L  ++ T+ IL+S
Sbjct: 231 AIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVS 290

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K    K+A  +   M +  + PD+  Y  LI   C+  K+ E+ +   E     L P
Sbjct: 291 GYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLP 350

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGLCKQSKLDEAC 562
              TY ++I G     + SS++K F+ ++++   G  P+ +TY  ++    K+ K+D A 
Sbjct: 351 DVVTYNTLINGCF---DCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 407

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
                M   G SP  VT  TL   YCK G  + A  +++ + +   K+   T+NT++  L
Sbjct: 408 NELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           C E+++  A         +   VD VS   L
Sbjct: 468 CGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 6/208 (2%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCR---QKKMKESEKFFQEAITAGLFPTKETYT 511
            A  +F RM +  L P++    TLI A  R   +  +  S+  F + I  G+     T+ 
Sbjct: 157 HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFN 216

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I G   +  +S A+    +M    C PDN++Y  ++  LCK+ KL+EA      M   
Sbjct: 217 ILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNN 276

Query: 572 GISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW-IRTVNTLIRKLCSEKRVGMA 628
           G+ P   T   L   YCK G    A  +I L + +  L  + T N LI  LC + ++  A
Sbjct: 277 GLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEA 336

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYE 656
                ++       D V+   L N C++
Sbjct: 337 FRLKDEMENLKLLPDVVTYNTLINGCFD 364


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 188/330 (56%), Gaps = 4/330 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI  FC +G   SI+ A  +  E+ ++G +P   +   LI+GLCK    ++ FRL  K
Sbjct: 227 NILINKFCKEG---SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL-KK 282

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +  +   P+V TY+ +I G CKE +++ AE L + M+++GL PN  T+T+LI G C+  
Sbjct: 283 TMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSR 342

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A +    M   G  P++  YN +++GLCK G V +A +L+ +     ++ DKITYT
Sbjct: 343 RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYT 402

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  + K+ + + A+ +   M + G+  D  A+T LI+ FCR  +++++E+  +E + A
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TYT +I GY + GN+    K  + M   G  P  ITY  L++GLCKQ ++  A
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNA 522

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
               E+M+  G++P ++T   L   +CK G
Sbjct: 523 NMLLEAMLNLGVTPDDITYNILLEGHCKNG 552



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 203/424 (47%), Gaps = 17/424 (4%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G+ + A  + + +   G    N     L+ A+ D GF     Q F L+       ++ 
Sbjct: 130 RKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN---SNFQI 186

Query: 295 NVYTHTVLIDGLCKKG-----WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
             +    L+D +         WT      F   +    + P V  Y  +I+ +CKE  + 
Sbjct: 187 PFHGCGYLLDKMINSNSPVTIWT------FYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A+++   ++++GL P T ++ +LI G CK  N +  + L   M +    P+++ Y+ +I
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLCK+GR+  A +L  +  QR L+ + IT+T L+    +      A+  + +M+  G+ 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y TL+   C+   + ++ K   E    G+ P K TYT++I GY ++G++ SA++ 
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            + MN+ G   DN+ + ALISG C+  ++ +A +    M+  G+ P + T   +   YCK
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 590 QGDSATAMIILESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +G+      +L+ +     K  + T N L+  LC + ++  A +    +L      D ++
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 647 LAAL 650
              L
Sbjct: 541 YNIL 544



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 224/470 (47%), Gaps = 28/470 (5%)

Query: 98  EQAITVVASLANEAGS------MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER 151
           + A +V A++ + AG+        AL   YW  GF          I C   L+ N NF+ 
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDA------IQCF-RLVRNSNFQI 186

Query: 152 AHE----VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                  ++  M++S + +  +   +S ++E    G P      N ++   C+ G +  A
Sbjct: 187 PFHGCGYLLDKMINSNSPV-TIWTFYSEILEY---GFPPKVQYYNILINKFCKEGSIRDA 242

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           + +F+E+  RG+     S+  ++   C+   + E  R    M +     D  T ++LI  
Sbjct: 243 KLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHG 302

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C +G    +  A +L +EM ++G +PN  T T LIDG C+    + A   + +++ +  
Sbjct: 303 LCKEG---RLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML-TMG 358

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            KP++  Y  +++G CK   +N+A  L++ M+  G+ P+  TYT+LI G+CK G+ E A 
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM 418

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           ++   M +EG   +  A+ A+I G C+ GRV++A   L++  +  ++ D  TYT+++  +
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+   K    L   M   G  P +  Y  L+   C+Q +MK +    +  +  G+ P  
Sbjct: 479 CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            TY  ++ G+ ++G     +K     N+ G   D   Y +L+S   K  K
Sbjct: 539 ITYNILLEGHCKNGKAEDLLKL---RNEKGLIVDYAYYTSLVSEYNKSLK 585



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 4/350 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           + E+   G       Y +++  +C+ G + +A    + +  RG      +   LI   C 
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                ++ + F L + M      P+V+T++VLI GLCK+G  + A +LF ++ +    +P
Sbjct: 271 SR---NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM-QQRGLRP 326

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  T+TA+I G C+  +++ A     +M   G+ P+   Y +L+ G CKVG+  +A  L+
Sbjct: 327 NGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV 386

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M   G  P+   Y  +IDG CK+G ++ A E+ K   +  +  D + +T L+S   + 
Sbjct: 387 DEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              + A      MV+AG+ PD   YT +I  +C++  +K   K  +E    G  P   TY
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
             ++ G  + G + +A    + M  +G  PD+ITY  L+ G CK  K ++
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 36/329 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +   L EGF +   M  N +     T + ++   C+ G ++ AE++FDEM  RG
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   CR  R+  A      ML  G   D      L+   C  G    + 
Sbjct: 324 LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVG---DVN 380

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L++EM   G KP+  T+T LIDG CK+G  E A  +   +        NV  +TA+
Sbjct: 381 KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTAL 439

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+C++ ++  AE  L  M E G+ P+  TYT +I G+CK GN +  + L+  M   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL-------------- 444
            P +  YN +++GLCK+G+++ A  LL+      +  D ITY ILL              
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559

Query: 445 ------------------SEHLKQAETKQ 455
                             SE+ K  + +Q
Sbjct: 560 LRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 245/505 (48%), Gaps = 11/505 (2%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
             S   +M   GL     T N V+G     G +E A  +F+EM A+G+  D  +Y  ++ 
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            Y ++G +T A      M D G   D  T   LI  FC   F   I QAFE L  M ++G
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK--FE-RIPQAFEYLHGMKQRG 351

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            +PNV T++ LID  CK G   +A + F+ ++R    +PN  TYT++I   CK   +N A
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV-GLQPNEFTYTSLIDANCKIGDLNEA 410

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L   M++ G+  N  TYT+L+ G C+ G    A +L   + K G T N   Y ++  G
Sbjct: 411 FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
             K   +++A ++L++  ++ L+ D + Y   +    +Q E + ++ +   M+  GL  +
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTAN 530

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
            + YTTLI A+ +  K  E+    QE    G+  T  TY  +I G  + G +  AV+YF 
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M + G  P+ + Y ALI GLCK   L+EA   +  M+ KGISP ++   +L     K G
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650

Query: 592 DSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
           +   A+ +   +  +  +L +    +LI       +V +A     ++L K    D+V   
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710

Query: 649 ALKNACYE----SNKYALFSDLSQR 669
            L    YE    +   AL  D+++R
Sbjct: 711 CLLRKYYELGDINEALALHDDMARR 735



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 233/476 (48%), Gaps = 15/476 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G L    S+  EM + G      T N ++   C+   +  A E    M  RG
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A+C+ G + EA+++   M+  G   +  T T LI A C  G    + 
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG---DLN 408

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+L  EM + G   N+ T+T L+DGLC+ G   +A  LF  L+++  +  N   YT++
Sbjct: 409 EAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA-GWTLNQQIYTSL 467

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
             GY K + M +A  +LE M ++ L P+   Y + I+G C+    E +  ++  M   G 
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           T N Y Y  +ID   K G+  EA  LL++     ++   +TY +L+    K    +QA+ 
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M + GL P+I  YT LI   C+   ++E++  F E +  G+ P K  YTS+I G +
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN   A+    RM +IG   D   Y +LI G  +  ++  A    + M+ KGI P +V
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR-----------TVNTLIRKLCSEK 623
             + L  +Y + GD   A+ + + + ++  I            T  T + KLC+ +
Sbjct: 708 LCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 219/513 (42%), Gaps = 47/513 (9%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG--- 172
           AL FF  A   A FRH    Y V A  L     +  A  V    +  +  +GR   G   
Sbjct: 111 ALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSV----IKEWILLGREFPGCDF 166

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE----------------------- 209
           F M+    N   P      + +  +  +LG++E A +                       
Sbjct: 167 FDMLWSTRNVCRPGF-GVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225

Query: 210 ------------VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
                        F +M   G+     +Y +++    R G +  A      M  +G   D
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T   LI  +   G  G +  A  + EEM   G +P+V T+  LI+  CK     +AF 
Sbjct: 286 IVTYNSLIDGY---GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFE 342

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            +L  ++    +PNV TY+ +I  +CK   +  A      M   GL PN  TYTSLI  +
Sbjct: 343 -YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDAN 401

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK+G+   A+ L   M + G   NI  Y A++DGLC+ GR++EA EL     +     ++
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQ 461

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
             YT L   ++K    ++A+ +   M K  L PD+  Y T I   CRQ ++++S    +E
Sbjct: 462 QIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIRE 521

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL      YT++I  Y + G  + AV   Q M  +G     +TYG LI GLCK   
Sbjct: 522 MMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGL 581

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + +A ++++ M   G+ P  +    L    CK 
Sbjct: 582 VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 156/331 (47%), Gaps = 43/331 (12%)

Query: 283 LLEEMVRKGWK-------PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +LEE  +  WK       P V +   L+  L K      A   F  +V +    P+V TY
Sbjct: 196 MLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVA-GLSPSVFTY 254

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I    +E  +  A  L E MK +GL P+  TY SLI G+ KVG    A  + + M  
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC P++  YN++I+  CK       +E + +AF                E+L       
Sbjct: 315 AGCEPDVITYNSLINCFCK-------FERIPQAF----------------EYLHG----- 346

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
                  M + GL P++  Y+TLI AFC+   + E+ KFF + I  GL P + TYTS+I 
Sbjct: 347 -------MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              + G+++ A K    M Q G   + +TY AL+ GLC+  ++ EA + + +++  G + 
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +    +L + Y K      AM ILE ++KK
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKK 490


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 158/600 (26%), Positives = 271/600 (45%), Gaps = 38/600 (6%)

Query: 78  HLRSSPPRLNLQIDIDSLTHEQAIT----------------VVASLANEAGSMVALSFFY 121
           HL S  P  N  +   +  HE   T                ++ SL  E  S   +  FY
Sbjct: 18  HLASHKPTSNSTLSFATTNHEPLTTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFY 77

Query: 122 WAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEI 166
           WA     F+    ++      L   G F+   ++++ M               + S+A  
Sbjct: 78  WASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASF 137

Query: 167 GRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G   E    V  M    G+   T   N ++ +  +   ++  E     M +RG+  D S+
Sbjct: 138 GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           + +++ A CR  ++  A   +  M D G + D  T T ++  F ++G   ++  A  + E
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEG---NLDGAMRVKE 254

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +MV  G      T  VL++G CK+G  E+A R   ++   + + P+ +T+  +++G  K 
Sbjct: 255 QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKT 314

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  +++ M  +G  P+  TY SLI G CK+G  + A  +++ M +  C+PN   Y
Sbjct: 315 GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY 374

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N II  LCK+ +V+EA +L      + +  D  TY  L+           A+ L+  M  
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G +PD   Y  LI + C + K++E+    +E   +G      TY ++I G+ ++  I+ 
Sbjct: 435 KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAE 494

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A + F +M   G + +++TY  LI GLCK  +++EA Q  + MI +G+ P + T  +L  
Sbjct: 495 AEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLT 554

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +CK GD   A  I++++     +  I T  TLI  LC   RV  A      +  K  N+
Sbjct: 555 YFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINL 614



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 210/459 (45%), Gaps = 21/459 (4%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIE 178
           + +       I  GN + A  V + MV +               F + GR++E    + E
Sbjct: 231 KTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEE 290

Query: 179 MT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           M+   G      T N +V    + G V++A EV D M   G   D  +Y  ++   C++G
Sbjct: 291 MSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLG 350

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            V EA + L+ M++R    +  T   +I+  C +     +++A +L   +  KG  P+V 
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKEN---QVEEATKLALVLTGKGILPDVC 407

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI GLC       A  L+ K +++    P+  TY  +I   C   K+  A  LL+ 
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELY-KEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  G   N  TY +LI G CK      A ++ D M  +G + N   YN +IDGLCK  R
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V+EA +L+ +     L+ DK TY  LL+   K  + K+A  +   M   G  PDI  Y T
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LIA  C+  +++ + K  +     G+  T   Y  +I    R      AV+ F+ M +  
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646

Query: 538 CAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGISP 575
            APD +TY  +  GLC+    + EA  F   M+ +G  P
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP 685



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 235/531 (44%), Gaps = 41/531 (7%)

Query: 97  HEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVM 156
           + + +  V ++  E G +    F+ + +      + ++L  +  ++++S G         
Sbjct: 140 YNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRG-IRPDVSTF 198

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++ +     +++    ++ EM + GL     T   ++    E G ++ A  V ++M  
Sbjct: 199 NILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVE 258

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCDKGFRG 275
            G      +  ++V  +C+ GR+ EA R++  M L  G   D  T  +L+      G   
Sbjct: 259 AGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTG--- 315

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +K A E+++ M+R+G+ P++YT+  LI GLCK G  ++A ++  +++  D   PN  TY
Sbjct: 316 HVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD-CSPNTVTY 374

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV--------------- 380
             +IS  CKE ++  A  L   +  +G+LP+  TY SLI G C                 
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434

Query: 381 --------------------GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
                               G  + A +L+  M   GC  N+  YN +IDG CK  R+ E
Sbjct: 435 KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAE 494

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A E+  +   + +  + +TY  L+    K    ++A  L  +M+  GL PD   Y +L+ 
Sbjct: 495 AEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLT 554

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+   +K++    Q   + G  P   TY ++I G  + G + +A K  + +   G   
Sbjct: 555 YFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINL 614

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
               Y  +I  L ++ +  EA + +  MI K  +P  VT   +    C+ G
Sbjct: 615 TPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 5/193 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G +K+   +V  M ++G      T   ++   C+ G VE A ++   +  +G
Sbjct: 552 LLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  ++ A  R  R  EA R    M+++    D  T  ++    C  G  G I 
Sbjct: 612 INLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG--GPIG 669

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + + EM+ +G+ P   +  +L +GL          +L   ++    +  N  T   M
Sbjct: 670 EAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT---M 726

Query: 339 ISGYCKEEKMNRA 351
           I G+ K  K   A
Sbjct: 727 IRGFLKISKYQDA 739


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 245/534 (45%), Gaps = 42/534 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  + G L+    ++IEM   GL       + V+   C++G ++ A E+   M  +G
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y ++    CR  R+ EA      M   G   D    + LI  F  +G    I 
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG---DID 350

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   + + MV  G   N+ T+ VLI GLCK G  EKA  + LK + +   KPN  T+  +
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI-LKGMVTLGCKPNSRTFCLL 409

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG--HCK----------------- 379
           I GYC+E  M RA  LL+ M+++ L+P+  +Y ++I G  HCK                 
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469

Query: 380 ----------------VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                            G  E A  L+D M   G  P+I+ YNAII  L K G+++EA  
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            L +   R L+ D +T+   +  + K  +  +A   F  M+  GL P+   YT LI    
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   + E+   F+     G+ P  +T ++ I G L++G +  A+K F  + + G  PD  
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY +LISG CKQ ++++A + ++ M  KGI+P       L    CK GD   A  + + +
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 604 DKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +K       T +T+I   C  + V  A   FH++  K          AL + C
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 763



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 251/558 (44%), Gaps = 50/558 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G + E   +   M + G+P+   T N ++   C+ G +E A E+   M   G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 219 VCADASSYKLMVVAYCR---MGRVTE--------------------------------AD 243
              ++ ++ L++  YCR   MGR  E                                A+
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           + L  M   G   +    ++LI A+  +G    I++A  LL+ M   G  P+++ +  +I
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEG---RIEEARRLLDGMSCSGVAPDIFCYNAII 515

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
             L K G  E+A    L+ ++    KP+  T+ A I GY K  KM  A    + M + GL
Sbjct: 516 SCLSKAGKMEEASTYLLE-IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 574

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +PN   YT LI GH K GN   A  +   +   G  P++   +A I GL K GRVQEA +
Sbjct: 575 MPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 634

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +  +  ++ L  D  TY+ L+S   KQ E ++A  L   M   G+ P+I  Y  L+   C
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   ++ + K F      GL P   TY++MI GY +  N++ A   F  M   G  P + 
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            Y AL+ G CK+  +++A   +  M+ KG +   ++  TL   YCK      A  + + +
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEM 813

Query: 604 DKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
             K  +    T  T+I   C   ++  A L F ++  ++  VD V+  +L    Y  NK 
Sbjct: 814 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL---MYGYNKL 870

Query: 661 A----LFSDLSQRIAEGI 674
                +F+   + +A+G+
Sbjct: 871 GQSSEVFALFEKMVAKGV 888



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 230/461 (49%), Gaps = 13/461 (2%)

Query: 160  VSSFAEIGRLKEGFSMVIEMTNNGL----PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
            +  +++ G++ E      EM ++GL    PL T  +N       + G +  A  +F  + 
Sbjct: 550  ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING----HFKAGNLMEALSIFRRLH 605

Query: 216  ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            A GV  D  +    +    + GRV EA +  S + ++G + D  T + LI+ FC    +G
Sbjct: 606  ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK---QG 662

Query: 276  SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             +++AFEL +EM  KG  PN++ +  L+DGLCK G  ++A +LF  +      +P+  TY
Sbjct: 663  EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTY 721

Query: 336  TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            + MI GYCK E +  A  L   M  +G+ P++  Y +L++G CK G+ E+A +L   M +
Sbjct: 722  STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 396  EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            +G    + ++N +IDG CK  ++QEA +L ++   +++  D +TYT ++  H K  + ++
Sbjct: 782  KGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 840

Query: 456  ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
            A  LF  M +  L  D   YT+L+  + +  +  E    F++ +  G+ P + TY  +I 
Sbjct: 841  ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIY 900

Query: 516  GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             + ++ N+  A K    +   G       +  LI+ LCK+  L EA +  + M   G+ P
Sbjct: 901  AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 960

Query: 576  CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
                  TL   + + G    A  + E +     +    TLI
Sbjct: 961  SLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 1001



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 168/700 (24%), Positives = 288/700 (41%), Gaps = 124/700 (17%)

Query: 83  PPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATS 142
           P +LN  + I ++ H+  +     L         L FFYW+        F+  + + A  
Sbjct: 66  PSKLNPDV-IRAVLHQNQVGDPKRL---------LDFFYWSQSQMGVPQFLDSFSILAVQ 115

Query: 143 LISNGNFERAHEVMQCM--------------------------------VSSFAEIGRLK 170
           L ++  F  A+ V+  M                                + S+  +G L 
Sbjct: 116 LCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLD 175

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  ++     N+ + +     N ++    + G++E   +V++ M    +  D  +Y  +V
Sbjct: 176 EAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLV 235

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            A C+ G +  A R L  M ++G   +    +L+I   C     G I +A EL   M  K
Sbjct: 236 GALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ---VGDIDEAVELKRSMGEK 292

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP-------------------- 330
           G  PN YT+T++  GLC+     +A +L  + ++    KP                    
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEA-KLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 351

Query: 331 ---------------NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
                          N+ TY  +I G CK  KM +A  +L+ M   G  PN+ T+  LI 
Sbjct: 352 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G+C+  N  RA +L+D M K    P+  +Y A+I+GLC    +  A +LL+K     L+ 
Sbjct: 412 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 471

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA--------------- 480
           + + Y+IL+  +  +   ++A  L   M  +G+ PDI  Y  +I+               
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 481 --------------------AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
                                + +  KM E+ K+F E +  GL P    YT +I G+ + 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           GN+  A+  F+R++ +G  PD  T  A I GL K  ++ EA + +  +  KG+ P   T 
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 581 VTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +L   +CKQG+   A      + L+ +   ++I   N L+  LC    +  A   F  +
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI--YNALVDGLCKSGDIQRARKLFDGM 709

Query: 636 LGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             K    D V+ + + +  C   N    FS   +  ++G+
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 749



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 208/450 (46%), Gaps = 20/450 (4%)

Query: 135  LYIVCATSLISNGN-------FERAH------EVMQC--MVSSFAEIGRLKEGFSMVIEM 179
            LY V        GN       F R H      +V  C   +    + GR++E   +  E+
Sbjct: 580  LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 180  TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
               GL     T + ++   C+ G VE A E+ DEMC +G+  +   Y  +V   C+ G +
Sbjct: 640  KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 240  TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
              A +    M ++G   D+ T + +I  +C      ++ +AF L  EM  KG +P+ + +
Sbjct: 700  QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE---NVAEAFSLFHEMPSKGVQPHSFVY 756

Query: 300  TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
              L+ G CK+G  EKA  LF ++++         ++  +I GYCK  K+  A  L + M 
Sbjct: 757  NALVHGCCKEGDMEKAMNLFREMLQKGF--ATTLSFNTLIDGYCKSCKIQEASQLFQEMI 814

Query: 360  EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             + ++P+  TYT++I  HCK G  E A  L   M +     +   Y +++ G  K G+  
Sbjct: 815  AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874

Query: 420  EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            E + L +K   + ++ D++TY +++  H K+    +A  L   +V  G+      +  LI
Sbjct: 875  EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934

Query: 480  AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             A C+++ + E+ K   E    GL P+     +++  +   G +  A + F+ +  +G  
Sbjct: 935  TALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994

Query: 540  PDNITYGALISGLCKQSKLDEACQFYESMI 569
            PD  T   L++G    +  ++A    + ++
Sbjct: 995  PDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 221/457 (48%), Gaps = 6/457 (1%)

Query: 149 FERAHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           F   H V  +  +++    +  +    S++ +M   G+     T N ++   C  G ++ 
Sbjct: 125 FGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKE 184

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F+EM   G   +  SY  ++   C+ G    A R    M       +  T   +I 
Sbjct: 185 AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIID 244

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           + C       + +A E L EMV +G  P+V T+  ++ G C  G   +A RLF ++V   
Sbjct: 245 SLCKDRL---VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV-GR 300

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+  T+  ++ G CKE  ++ A  + E M E+G  PN  TY +L+ G+C     + A
Sbjct: 301 NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEA 360

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++ +M  +GC PN+ +YN +I+G CK  R+ EA  LL +  ++ L  D +TY+ L+  
Sbjct: 361 IKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQG 420

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++AL LF  M  +GL PD+ AY+ L+  FC+   + E+ K  +E     + P 
Sbjct: 421 LCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPN 480

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              YT +I G    G +  A + F +++  G  PD  TY  +I GL K+   DEA +F+ 
Sbjct: 481 IILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFR 540

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            M   G  P   +   +   + +  DS+TA+ +++ +
Sbjct: 541 KMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 196/370 (52%), Gaps = 5/370 (1%)

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N G P +  T N ++   C+  LV  A E   EM  RG+  D  +Y  ++  +C +G++ 
Sbjct: 230 NRGKPNVV-TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA R    M+ R  + D  T  +L+   C +G    + +A  + E M  KG +PN YT+ 
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM---VSEARCVSETMTEKGAEPNAYTYN 345

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            L+DG C     ++A ++ L ++      PN+ +Y  +I+GYCK ++MN A+ LL  M E
Sbjct: 346 ALMDGYCLHNQMDEAIKV-LGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           + L P+T TY++L+ G C+VG    A +L   M   G  P++ AY+ ++DG CK G + E
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 464

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +LLK+  +R ++ + I YTIL+       + + A  LF ++   G+ PDI  Y  +I 
Sbjct: 465 ALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIK 524

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              ++    E+ +FF++    G  P   +Y  +I G+L++ + S+A++    M     + 
Sbjct: 525 GLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSA 584

Query: 541 DNITYGALIS 550
           D+ T+  L+ 
Sbjct: 585 DSSTFQMLLD 594



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 203/416 (48%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G++KE   +  EM  +G      + N V+   C+ G    A  VF +M    
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++ + C+   V EA  +LS M+DRG   D  T   ++  FC     G + 
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCS---LGQLN 288

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L +EMV +   P+  T  +L+DGLCK+G   +A R   + +     +PN +TY A+
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNAL 347

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   +M+ A  +L  M  +G  PN ++Y  LI G+CK      A  L+  M ++  
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+   Y+ ++ GLC+ GR +EA  L K+     L  D + Y+ILL    K     +AL 
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M +  + P+I  YT LI       K++ +++ F +    G+ P   TY  MI G L
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           ++G    A ++F++M   G  PD+ +Y  +I G  +      A Q  + M+GK  S
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFS 583



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 13/409 (3%)

Query: 236 MGRVTEADRWLSAM-----LDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +G + +  ++ SA+     +D   +  N  +L +LI   C       +  A  ++ +M +
Sbjct: 103 LGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR---LSHVDFAVSVMGKMFK 159

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G +P+  T   LI+GLC +G  ++A  LF ++V S  ++PNV +Y  +I+G CK     
Sbjct: 160 LGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS-GHEPNVISYNTVINGLCKNGNTI 218

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  +  +M++    PN  TY ++I   CK      A + +  M   G  P++  YN I+
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G C  G++ EA  L K+   R +  D +T+ IL+    K+    +A  +   M + G  
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+ + Y  L+  +C   +M E+ K     I  G  P   +Y  +I GY +   ++ A + 
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M++    PD +TY  L+ GLC+  +  EA   ++ M   G+ P  +    L   +CK
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458

Query: 590 QGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            G    A+ +L+ + +   K  I     LIR +    ++ +A   F KL
Sbjct: 459 HGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 171/363 (47%), Gaps = 4/363 (1%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           SI  A      MVR   +P+V      +  + KK     A  L  ++        NV++ 
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLF-GVTHNVYSL 134

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+  C+   ++ A  ++ +M + G+ P+  T+ +LI G C  G  + A  L + M  
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN+ +YN +I+GLCK G    A  + +K  Q   + + +TY  ++    K     +
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+     MV  G+ PD+  Y T++  FC   ++ E+ + F+E +   + P   T+  ++ 
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  ++G +S A    + M + G  P+  TY AL+ G C  +++DEA +    MIGKG +P
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFF 632
              +   L   YCK      A  +L  + +K L   TV  +TL++ LC   R   A   F
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434

Query: 633 HKL 635
            ++
Sbjct: 435 KEM 437



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 67/294 (22%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           RM      P+   +   +    K   +  A  L + M   G T N+Y+ N +I+ LC+  
Sbjct: 86  RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            V  A  ++ K F                                   K G+ PD   + 
Sbjct: 146 HVDFAVSVMGKMF-----------------------------------KLGIQPDAITFN 170

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           TLI   C + K+KE+   F E + +G  P   +Y ++I G  ++GN   AV+ F++M Q 
Sbjct: 171 TLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQN 230

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              P+ +TY  +I  LCK   ++EA +F   M+ +GI P  VT                 
Sbjct: 231 RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT----------------- 273

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                           NT++   CS  ++  A   F +++G++   D V+   L
Sbjct: 274 ---------------YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 237/479 (49%), Gaps = 40/479 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   ++G L    S   EM + GL     +   ++   C  G +  A  ++ EM  +G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++ A  R  R+T+A R    ML++  + +  T  ++I   C +G   +  
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEG---NTV 558

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFELL +MV+KG  P+ YT+  LI  LC  G   +A + F+  +  +++K N   Y+A+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEA-KKFIDDLHREHFKLNEMCYSAL 617

Query: 339 ISGYCKEEKMNRA-----EM------------------------------LLERMKEQGL 363
           + GYCKE ++  A     EM                              LL+ M +Q L
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   YTS+I G+ K G+ ++A+ + D+M  EGCTPNI  Y  +I+ LCK G + +A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L K+        + +TY   L    ++   ++A+ L   M+K GL  +  +Y  L+  FC
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFC 796

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  +++E+ K   E I   +FP   TY+++I    R GN+  A++++  M   G  PD +
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            Y  LI G C   +L +A +  + MI +G+ P + T  +L++   ++   +T  ++ E+
Sbjct: 857 AYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSISTHPVMPEN 915



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 241/512 (47%), Gaps = 43/512 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++S  + G+  E   +  EM   GL     T + ++   C  G ++ A     +M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+      Y  ++  +C++G ++ A  +   M+D+G      + T LI+ +C+KG  
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKG-- 485

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +AF L  EM  KG  PN YT T LI  L +      AFRLF +++   N  PN  T
Sbjct: 486 -KLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ-NMMPNEVT 543

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  MI G+CKE    +A  LL +M ++GL+P+T TY  LI   C  G    A   +D + 
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEA--------------------------------- 421
           +E    N   Y+A++ G CK+GR+++A                                 
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663

Query: 422 --YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
             + LLK    + L+ DK+ YT ++  + K    K+A G++  M+  G  P+I  YTTLI
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C+   M ++E  ++E + +   P   TY   +    R+G++  AV+    M + G  
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLL 782

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            + ++Y  L+ G CK  +++EA +  + MI   I P  +T  T+ Y+ C++G+   A+  
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEF 842

Query: 600 LES-LDKKLWIRTV--NTLIRKLCSEKRVGMA 628
            ++ L+K L   T+  N LI   C    +G A
Sbjct: 843 WDTMLNKGLKPDTLAYNFLIYGCCIAGELGKA 874



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 239/562 (42%), Gaps = 108/562 (19%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F      +  +V      G++ + F +V  +   G        N ++   C+ G  + AE
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +F EM  +G+CA+  +Y +++ ++CR G++  A  +L  M+  G  +       LI   
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C     G++  A    +EM+ KG KP V ++T LI G C KG   +AFRL+ ++      
Sbjct: 447 CK---LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT-GKGI 502

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN +T+T +IS   +  +M  A  L + M EQ ++PN  TY  +I GHCK GN  +A++
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 389 LMDLMGKEGCTPNIYAY-----------------------------------NAIIDGLC 413
           L++ M ++G  P+ Y Y                                   +A++ G C
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 414 KKGRVQEA-----------------------------------YELLKKAFQRELQADKI 438
           K+GR+++A                                   + LLK    + L+ DK+
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKV 682

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            YT ++  + K    K+A G++  M+  G  P+I  YTTLI   C+   M ++E  ++E 
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742

Query: 499 ITA----------------------------------GLFPTKETYTSMICGYLRDGNIS 524
           + +                                  GL     +Y  ++ G+ + G + 
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVE 802

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A K    M      PD ITY  +I   C++  LD A +F+++M+ KG+ P  +    L 
Sbjct: 803 EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862

Query: 585 YEYCKQGDSATAMIILESLDKK 606
           Y  C  G+   A  + + + ++
Sbjct: 863 YGCCIAGELGKAFELRDDMIRR 884



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 216/452 (47%), Gaps = 14/452 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  A+I R+     +  E+ + G+         V+   CEL     A+E+   M +  
Sbjct: 199 VLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD 258

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y +++   C+  RV EA    + ++ +G      T   L+   C         
Sbjct: 259 L--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKV------- 309

Query: 279 QAFEL----LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           Q FE+    ++EM+  G+ P     + L++GL +KG    AF L +  V+     P++  
Sbjct: 310 QEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDL-VNRVKKVGAMPSLFV 368

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+I+  CK+ K + AE+L + M E+GL  N  TY+ LI   C+ G  + A   +  M 
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G    +Y YN++I+G CK G +  A     +   + L+   ++YT L+S +  + +  
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L+  M   G+ P+ + +TTLI+A  R  +M ++ + F E +   + P + TY  MI
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ ++GN   A +   +M Q G  PD  TY  LIS LC   ++ EA +F + +  +   
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             E+    L + YCK+G    A+ +   + K+
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKR 640



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 11/405 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-KGFRGSIKQAFELLEEMVRKGWK 293
           ++ RV         +L  G   D      +I +FC+ K F     +A E+++ M  +   
Sbjct: 205 KIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNF----AKAKEMIQRM--ESSD 258

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            NV  + VLI GLCK     +A  +   L++       V TY  ++ G CK ++      
Sbjct: 259 LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEV-TYCTLVLGLCKVQEFEVGAG 317

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +++ M E G +P     +SL+ G  + G    A+DL++ + K G  P+++ YNA+I+ LC
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G+  EA  L K+  ++ L A+ +TY+IL+    ++ +   A+    +M+ AG+   ++
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y +LI   C+   +  +  FF E I  GL PT  +YTS+I GY   G +  A + +  M
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G AP+  T+  LIS L + +++ +A + ++ M+ + + P EVT   +   +CK+G++
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 594 ATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
             A  +L  + +K  +    T   LI  LCS  RV  A  F   L
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/526 (23%), Positives = 237/526 (45%), Gaps = 44/526 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ SF E+    +   M+  M ++ L ++    N ++   C+   V  A E+ + +  +G
Sbjct: 234 VIRSFCELKNFAKAKEMIQRMESSDLNVVV--YNVLIHGLCKNKRVWEAVEIKNGLIQKG 291

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A   +Y  +V+  C++         +  M++ G +   A L+ L+     KG    + 
Sbjct: 292 LTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKG---KVV 348

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+L+  + + G  P+++ +  LI+ LCK G  ++A  LF K +       N  TY+ +
Sbjct: 349 DAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLF-KEMGEKGLCANDVTYSIL 407

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +C+  K++ A   L +M   G+      Y SLI GHCK+GN   A    D M  +G 
Sbjct: 408 IDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGL 467

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYEL----------------------------LKKAF- 429
            P + +Y ++I G C KG++ EA+ L                            +  AF 
Sbjct: 468 KPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFR 527

Query: 430 ------QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
                 ++ +  +++TY +++  H K+  T +A  L  +MV+ GL PD + Y  LI++ C
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLC 587

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              ++ E++KF  +         +  Y++++ GY ++G +  A+   + M + G   D +
Sbjct: 588 STGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLV 647

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            Y  LI G  K+          ++M  + + P +V   ++   Y K G    A  I + +
Sbjct: 648 CYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIM 707

Query: 604 DKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
             +     I T  TLI +LC    +  A L + ++L  +   + V+
Sbjct: 708 IDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVT 753



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 170/396 (42%), Gaps = 41/396 (10%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  +L+R     P V T   +++G  K  +++   +L   +   G+ P+   Y ++I   
Sbjct: 179 LIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSF 238

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C++ NF +A +++  M  E    N+  YN +I GLCK  RV EA E+     Q+ L A +
Sbjct: 239 CELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASE 296

Query: 438 ITYTIL----------------------------------LSEHL-KQAETKQALGLFCR 462
           +TY  L                                  L E L ++ +   A  L  R
Sbjct: 297 VTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNR 356

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           + K G  P +  Y  LI + C+  K  E+E  F+E    GL     TY+ +I  + R G 
Sbjct: 357 VKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGK 416

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + +A+ +  +M   G       Y +LI+G CK   L  A  F++ MI KG+ P  V+  +
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTS 476

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   YC +G    A  +   +  K       T  TLI  L    R+  A   F ++L ++
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 640 QNVDRVSL-AALKNACYESNKYALFSDLSQRIAEGI 674
              + V+    ++  C E N    F  L+Q + +G+
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 6/345 (1%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I  Y +E++M  + ++   M++  L+P   T   ++ G  K+   +    L   + 
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  P+IY Y A+I   C+     +A E++++    +L    + Y +L+    K     
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNV--VVYNVLIHGLCKNKRVW 278

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ +   +++ GL      Y TL+   C+ ++ +       E I  G  PT+   +S++
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R G +  A     R+ ++G  P    Y ALI+ LCK  K DEA   ++ M  KG+ 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALF 631
             +VT   L   +C++G   TA+  L  +     K+ +   N+LI   C    +  A  F
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGIG 675
           F +++ K      VS  +L +  C +   +  F    +   +GI 
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIA 503


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 233/451 (51%), Gaps = 13/451 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++   + A++V  EM  RG   +  +Y +++   CR G V EA  +   M D G + D 
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI   C K  R +  +A  LL+EM     KPNV  +  LIDG  ++G  ++AF++
Sbjct: 293 FTYGALINGLC-KSRRSN--EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKM 349

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             ++V +   +PN  TY  ++ G CK  +M+RA +LL++M      P+T TY  +I GH 
Sbjct: 350 IKEMVAA-GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +  + + A+ L+  M   G +PN+Y Y+ +I GLC+ G  ++A +LL++   + L+ +  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y  L+S + ++     A  +F +M K  + PD++ Y +LI    +  +++ES K+F + 
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              GL P + TY+ +I GYL++G++ SA +  QRM   G  P+++ Y  L+    K   +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TL 615
           ++    ++SM+ +G+         L +     G+   A  +L  ++K   +  V+   +L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 616 IRKLCS----EKRVGMAALFFHKLLGKDQNV 642
           I  LC     EK  G+      K  G D N+
Sbjct: 649 ISGLCKTADREKAFGILDEMSKK--GVDPNI 677



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 237/520 (45%), Gaps = 10/520 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G   E F M+ EM   G+     T + +V   C++G ++ A  +  +M    
Sbjct: 333 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 392

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y L++  + R     +A R LS M + G   +  T +++I   C  G     +
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG---EPE 449

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LLEEM  KG KPN + +  LI G C++G    A  +F K+ +  N  P+++ Y ++
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSL 508

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K  ++  +     +M+E+GLLPN  TY+ LI+G+ K G+ E A  L+  M   G 
Sbjct: 509 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +++   K   +++     K    + +  D   Y IL+         + A  
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   + K G  PD+H Y++LI+  C+    +++     E    G+ P    Y ++I G  
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+IS A   F  +   G  P+ +TY +LI G CK   +  A   Y  M+  GI+P   
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748

Query: 579 TRVTLAYEYCKQGDSATAMIILES--LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               L       GD   AM ++E   L     I + N L+   C   ++       H ++
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM 808

Query: 637 GKDQNVDRVSLAALKNACYESNK----YALFSDLSQRIAE 672
           G+    + +++  + +   E+ K    + +F +L Q+ +E
Sbjct: 809 GRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 848



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 236/518 (45%), Gaps = 42/518 (8%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM   G  L T T N ++   C  G VE A     +M   G+  D  +Y  ++   C
Sbjct: 244 VLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLC 303

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWK 293
           +  R  EA     A+LD  +  +     ++     D   R G+  +AF++++EMV  G +
Sbjct: 304 KSRRSNEA----KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 359

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS-----------------------DNYK- 329
           PN  T+  L+ GLCK G  ++A  L  ++VR                        D ++ 
Sbjct: 360 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 419

Query: 330 ----------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
                     PNV+TY+ MI G C+  +  +A  LLE M  +GL PN   Y  LI G+C+
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            GN   A ++ D M K    P++Y YN++I GL K GRV+E+ +   +  +R L  ++ T
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+  +LK  + + A  L  RM+  GL P+   Y  L+ ++ +   +++    F+  +
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+      Y  +I      GN+ +A +    + + G  PD   Y +LISGLCK +  +
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
           +A    + M  KG+ P  V    L    CK GD + A  +  S+  K  +    T  +LI
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
              C    +  A   ++++L      D    + L   C
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 224/532 (42%), Gaps = 60/532 (11%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           FRH  +       S + N            M+    + G  ++   ++ EMT  GL    
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                ++   C  G V  A E+FD+M    V  D   Y  ++    ++GRV E+ ++ + 
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M +RG + +  T + LI  +   G    ++ A +L++ M+  G KPN   +  L++   K
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNG---DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               EK    F  ++       N   Y  +I        M  A  +L  +++ G +P+ +
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDN-RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+SLI G CK  + E+A+ ++D M K+G  PNI  YNA+IDGLCK G +  A  +    
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD----------------- 471
             + L  + +TYT L+    K  +   A  L+  M+  G+ PD                 
Sbjct: 704 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 763

Query: 472 -----------------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
                            I ++  L+  FC++ KM+E+ K     +  GL P   T  ++I
Sbjct: 764 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 823

Query: 515 CGYLRDGNIS---------------SAVKYFQRM-----NQIGCAPDNITYGALISGLCK 554
            G    G +S               SA ++F  +     NQ G  P ++    +I   CK
Sbjct: 824 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ-GKIPLDVV-DDMIRDHCK 881

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           +  LD+A    + ++ K       + + +    C++G  + A+ +L+ +DK+
Sbjct: 882 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 3/304 (0%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           + + +  YCK  + + A+ +L  M+E+G   NT TY  LI G C+ G  E A+     M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  P+ + Y A+I+GLCK  R  EA  LL +    EL+ + + Y  L+   +++    
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +   MV AG+ P+   Y  L+   C+  +M  +    ++ +     P   TY  +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ R  +   A +    M   G +P+  TY  +I GLC+  + ++A    E M  KG+ 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P       L   YC++G+ + A  I + + K   +  +   N+LI  L    RV  +  +
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 632 FHKL 635
           F ++
Sbjct: 525 FAQM 528



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 150/369 (40%), Gaps = 57/369 (15%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E     F  M  +GV  D   Y +++      G +  A R LS +   G++ D    + 
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI+  C    R   ++AF +L+EM +KG  PN+  +  LIDGLCK G    A  +F  ++
Sbjct: 648 LISGLCKTADR---EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 704

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT---------------- 367
            +    PN  TYT++I G CK   ++ A  L   M   G+ P+                 
Sbjct: 705 -AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 763

Query: 368 ------------------NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
                             +++ +L+ G CK G  +    L+ ++   G  PN      II
Sbjct: 764 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 823

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GL + G++ E +                T  + L +   ++  +    LF  M+  G  
Sbjct: 824 SGLSEAGKLSEVH----------------TIFVELQQKTSESAARHFSSLFMDMINQGKI 867

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK-ETYTSMICGYLRDGNISSAVK 528
           P +     +I   C++  + ++    ++ I A   P    +Y +++    R G +S A+ 
Sbjct: 868 P-LDVVDDMIRDHCKEGNLDKA-LMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALN 925

Query: 529 YFQRMNQIG 537
             + M++ G
Sbjct: 926 LLKEMDKRG 934



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 24/197 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   + +  +  G L++   ++ EM   G   I+S  N V G  C+ G ++   ++   +
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF-CKRGKMQETLKLLHVI 807

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTE---------------ADRWLSA----MLDRGAI 255
             RG+  +A + + ++      G+++E               A R  S+    M+++G I
Sbjct: 808 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 867

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
                L ++     D    G++ +A  L + +V K       ++  ++D LC+KG   +A
Sbjct: 868 ----PLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 923

Query: 316 FRLFLKLVRSDNYKPNV 332
             L  ++ +  N +P +
Sbjct: 924 LNLLKEMDKRGNLQPTL 940


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 215/437 (49%), Gaps = 17/437 (3%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           A +    ++    + GR    + +  +M   G      T   ++   C  G    A  +F
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           DEM  + +      Y +++   C   R++EA+     M + G + +  T   ++  +C  
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +K+A EL  EM+  G  PNV T  +LIDGLCK      A R FL  + S    PN
Sbjct: 277 ---AHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSA-RKFLIDMASFGVVPN 332

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           +  Y  +I GYCK   ++ A  L   +++  +LP+  TY+ LI G C V   E A  L+ 
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K+G  PN   YN +IDG CK+G +++A E+  +  ++ ++ + IT++ L+  + K  
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + + A+GL+  MV  GL PD+ AYT LI    +    KE+ +  +E   AGL P   T +
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 512 SMICGYLRDGNISSAVKYF----------QRMNQIG---CAPDNITYGALISGLCKQSKL 558
            +I G  +DG IS A+K F           + N++    C+P+++ Y ALI GLC   ++
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572

Query: 559 DEACQFYESMIGKGISP 575
            +A +F+  M   G+ P
Sbjct: 573 FKASKFFSDMRCSGLRP 589



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F+E+G ++E   +  +M  + LP + +  N V+    + G  +   +V+ +M
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKM--DVLPAMQAC-NMVLDGLVKKGRFDTMWKVYGDM 184

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ARG   +  +Y  ++   CR G   +A R    M+++         T+LI   C +   
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGES-- 242

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I +A  +   M   G  PN+YT+  ++DG CK    +KA  L+ +++  D   PNV T
Sbjct: 243 -RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML-GDGLLPNVVT 300

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I G CK ++M  A   L  M   G++PN   Y  LI G+CK GN   A  L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K    P+++ Y+ +I GLC   R++EA  LL++  ++    + +TY  L+  + K+   +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ +  +M + G+ P+I  ++TLI  +C+  KM+ +   + E +  GL P    YT++I
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            G+ +DGN   A +  + M + G  P+  T   LI GLCK  ++ +A + + +  G
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 196/412 (47%), Gaps = 17/412 (4%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    +  AE +F  M   G+  +  +Y  M+  YC++  V +A      ML  G + + 
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNV 298

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  +LI   C       +  A + L +M   G  PN++ +  LIDG CK G   +A  L
Sbjct: 299 VTFGILIDGLCKTD---EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             ++ + +   P+V TY+ +I G C  ++M  A+ LL+ MK++G LPN  TY +LI G+C
Sbjct: 356 HSEIEKHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K GN E+A ++   M ++G  PNI  ++ +IDG CK G+++ A  L  +   + L  D +
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF--- 495
            YT L+  H K   TK+A  L   M +AGL+P++   + LI   C+  ++ ++ K F   
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534

Query: 496 ----------QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
                      E   +   P    YT++I G   DG I  A K+F  M   G  PD  T 
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             +I G  +   L +       ++  GI P       LA  Y + G   +A+
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 202/433 (46%), Gaps = 8/433 (1%)

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           E+GLVE A  V+ +M    V     +  +++    + GR     +    M+ RGA  +  
Sbjct: 138 EMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV 194

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T   LI   C +G      +AF L +EM+ K   P V  +T+LI GLC +    +A  +F
Sbjct: 195 TYGTLIDGCCRQG---DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            + +R+    PN++TY  M+ GYCK   + +A  L   M   GLLPN  T+  LI G CK
Sbjct: 252 -RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK 310

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                 A   +  M   G  PNI+ YN +IDG CK G + EA  L  +  + E+  D  T
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+IL+         ++A GL   M K G  P+   Y TLI  +C++  M+++ +   +  
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+ P   T++++I GY + G + +A+  +  M   G  PD + Y ALI G  K     
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTVNTLIRK 618
           EA + ++ M   G+ P   T   L    CK G  + A+ + L            N L R 
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 619 LCSEKRVGMAALF 631
           LCS   V   AL 
Sbjct: 551 LCSPNHVMYTALI 563



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 169/389 (43%), Gaps = 52/389 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + +I  +K+   +  EM  +GL     T   ++   C+   +  A +   +M + G
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y  ++  YC+ G ++EA    S +     + D  T ++LI   C       ++
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD---RME 385

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL+EM +KG+ PN  T+  LIDG CK+G  EKA  +  ++      +PN+ T++ +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTL 444

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL--------- 389
           I GYCK  KM  A  L   M  +GLLP+   YT+LI GH K GN + A+ L         
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 390 ----------MDLMGKEG-----------------------------CTPNIYAYNAIID 410
                     +D + K+G                             C+PN   Y A+I 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  GR+ +A +         L+ D  T  +++  H +    +  + L   ++K G+ P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +   Y  L   +     +K +  F  E +
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALSFCGEGV 653



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 17/285 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     + R++E   ++ EM   G      T N ++   C+ G +E A EV  +M  +G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  +  ++  ++  YC+ G++  A    + M+ +G + D    T LI    D  F+ G+ 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI----DGHFKDGNT 489

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY--------- 328
           K+AF L +EM   G  PNV+T + LIDGLCK G    A +LFL    +D           
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549

Query: 329 ---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               PN   YTA+I G C + ++ +A      M+  GL P+  T   +I GH +  +   
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
              L   + K G  PN   Y  +  G  + G ++ A     +  Q
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           T   +  +I  +   G +  A+  + +M+ +   P       ++ GL K+ + D   + Y
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVY 181

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSE 622
             M+ +G SP  VT  TL    C+QGD   A  +  E ++KK++   V    LIR LC E
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 623 KRVGMAALFFHKL 635
            R+  A   F  +
Sbjct: 242 SRISEAESMFRTM 254



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 27/189 (14%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKA 315
           D  T+T+ ++A  D G         E +   +R +G   ++  +  LI+   K G    A
Sbjct: 748 DIVTVTVALSACADLG----ALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 803

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG------------- 362
            RLF         K +V T+T+MI G+    +   A  L   MKE               
Sbjct: 804 RRLF-----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXE 858

Query: 363 ---LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRV 418
              +LPN  T+  ++      G  E        M ++    P I  +  ++D LC+ G +
Sbjct: 859 SSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLL 918

Query: 419 QEAYELLKK 427
            EAYE + K
Sbjct: 919 TEAYEFILK 927


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 224/442 (50%), Gaps = 16/442 (3%)

Query: 168 RLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           R  E   +  EM   G +P + S    + G  C  G  E A+ +F+EM   G+  D ++ 
Sbjct: 473 REDEARELFEEMKAQGIMPDVISYTTLIHGF-CLSGKWEKAKCLFNEMLDVGIQPDVTTS 531

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++   C+ G+V EA++ L  ++ RG ILD  T T L+   C    +  I +A +L  +
Sbjct: 532 SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC---MKHRISKATQLFLK 588

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNVHTYTAMISG 341
           M + G  PNV T   L+ GLC+ G  + A  L   ++        N KPN  +Y+ +I G
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK  + + A  L + MK  G++P+  +YTSLI+G C+ G ++ A  L + M   G  P+
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  ++ +ID LCK+G+V EA ELL+   QR    + +TYT L+          +A  LF 
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT------AGLFPTKETYTSMIC 515
           +M K G  PD+  Y TL+   C+   +K + +  ++ ++          P   +Y+ +I 
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G    A + F+ M  +G  P+ I+Y +LI G C+  KL++A   +  M+ +G+  
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
             VT   + + +CK+G    A+
Sbjct: 889 NAVTYSVMIHGFCKEGQIDKAL 910



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 227/459 (49%), Gaps = 21/459 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY +++   C+  R  EA      M  +G + D  + T LI  FC     G  ++A  L 
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC---LSGKWEKAKCLF 516

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM+  G +P+V T +VLID LCKKG   +A +L L++V       +V T T ++ G C 
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL-LEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------GC 398
           + ++++A  L  +M++ G +PN  T  +L+ G C+ GN + A +L   M  +       C
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN  +Y+ IIDGLCK GR  EA EL K+     +  D I+YT L+    +  + K A  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G+ PD+  ++ LI   C++ K+ E+ +  +  I  G  P   TYT+++ G  
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI------GKG 572
            +  IS A + F +M ++GC PD +TYG L+ GLC+   +  A + ++ M+      G  
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAA 629
             P  ++   +    CK G    A  + + +     I  V    +LI   C   ++  A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESN-KYALFSDL 666
             F++++ +   ++ V+ + + +  C E     ALF  +
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKM 914



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 217/460 (47%), Gaps = 24/460 (5%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D ++  +++   C+ G+V EA+  L  M+ RG ILD  T + LI   C       I +A 
Sbjct: 53  DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC---MEHRISEAT 109

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-----KPNVHTYT 336
            L   M + G +P+  T+  L+ GLC+ G    A +L  +++          KP + +Y+
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G CK+ + + A  L + MK QG++P+  +YTSLI+G C  G +E+A  L + M   
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++     +ID  CK+G+V EA ELL+    R    D +TY+ L+     +    +A
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-------LFPTKET 509
             LF  M K G  PD  AY TL+   C+  K+  +    QE +          + P   T
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT 349

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + +I    ++G +  A +  + M Q GC  D +TY  LI GLC + ++ EA   + SM 
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---------KLWIRTVNTLIRKLC 620
             G  P  +T  TL    C+ G+   A+ + + +           K  + + + +I  LC
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            ++R   A   F ++  +    D +S   L +    S K+
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW 509



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 213/443 (48%), Gaps = 17/443 (3%)

Query: 168 RLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           R  E   +  EM   G+ P + S  + + G  C  G  E A+ +F+EM   G+  D ++ 
Sbjct: 180 REDEARELFKEMKAQGMMPDVISYTSLIHGF-CHSGKWEKAKCLFNEMLDVGIQPDVTTS 238

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +C+ G+V EA+  L  M+ RG ILD  T + LI   C    +  I +A +L   
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC---MKHRISEATQLFMS 295

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN------YKPNVHTYTAMIS 340
           M + G +P+   +  L+ GLC+ G    A  L  +++   +       +P+V T + +I 
Sbjct: 296 MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLID 355

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
             CKE K+  A  LLE M ++G + +  TY++LI G C       A  L   M K GC P
Sbjct: 356 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 415

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQR------ELQADKITYTILLSEHLKQAETK 454
           +   Y  ++ GLC+ G +  A +L ++          + +   I+Y+I++    K     
Sbjct: 416 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 475

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M   G+ PD+ +YTTLI  FC   K ++++  F E +  G+ P   T + +I
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G +  A K  + + Q GC  D +T   L+ GLC + ++ +A Q +  M   G  
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595

Query: 575 PCEVTRVTLAYEYCKQGDSATAM 597
           P  VT  TL    C+ G+   A+
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIAL 618



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 219/474 (46%), Gaps = 46/474 (9%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D+ ++ +++   C + RV E    ++ ++ RG I D  T ++              
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI-------------- 50

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
                          +P+V T ++LID LCK+G   +A  L L+++       ++ TY+ 
Sbjct: 51  ---------------RPDVTTSSMLIDILCKEGKVIEANEL-LEVMIQRGCILDIVTYST 94

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM---- 393
           +I G C E +++ A  L   M++ G  P+  TY +L+ G C+ GN   A  L   M    
Sbjct: 95  LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154

Query: 394 GKEG--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           G+ G  C P + +Y+ IIDGLCK  R  EA EL K+   + +  D I+YT L+       
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + ++A  LF  M+  G+ PD+     LI  FC++ K+ E+ +  +  +  G      TY+
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG- 570
           ++I G      IS A + F  M ++GC PD I YG L+ GLC+  K++ A   ++ M+  
Sbjct: 275 TLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLND 334

Query: 571 ------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCS 621
                 K I P   T   L    CK+G    A  +LE + ++   L I T +TLI+ LC 
Sbjct: 335 TSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 394

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           E R+  A   F  +       D ++   L     ++    +   L Q +    G
Sbjct: 395 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 10/269 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++    + GR  E   +  EM   G +P + S  + + G  C  G  + A+ +F+EM   
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF-CRSGKWKDAKYLFNEMVDI 703

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  D +++ +++   C+ G+V EA+  L  M+ RG I +  T T L+   C       I
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC---MNDRI 760

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNV 332
            +A +L  +M + G  P+V T+  L+ GLC+ G  + A  L  K++        N+KP+V
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+ +I G CK  + + A  L + MK  G++PN  +YTSLI+G C+ G  E A  L + 
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           M  +G   N   Y+ +I G CK+G++ +A
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 18/331 (5%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY---------NAI 408
           M+  GL P++ T+  LI   C V         M  + + G  P+I  Y         + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           ID LCK+G+V EA ELL+   QR    D +TY+ L+     +    +A  LF  M K G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT-AGLF-----PTKETYTSMICGYLRDGN 522
            PD   Y TL+   C+   +  + +  QE +   G +     PT  +Y+ +I G  +D  
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
              A + F+ M   G  PD I+Y +LI G C   K ++A   +  M+  GI P   T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 583 LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   +CK+G    A  +LE +  +   L I T +TLI+ LC + R+  A   F  +    
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 640 QNVDRVSLAALKNACYESNKYALFSDLSQRI 670
              D ++   L     ++ K  +   L Q +
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 12/155 (7%)

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG---------ISPCEVTRVTL 583
           M   G  PD+ T+  LI+ LC   +++E       ++ +G         I P   T   L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
               CK+G    A  +LE + ++   L I T +TLI+ LC E R+  A   F  +     
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
             D ++   L     ++    +   L Q +    G
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 155


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 213/411 (51%), Gaps = 6/411 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR++E   ++ EM   GL +     + ++   C  G ++  + +FDEM  +G+  +   Y
Sbjct: 59  GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +C+ G   EA   L  M +RG   D  T T +I   C  G     ++A +L + 
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDG---RARKALDLFDL 175

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG +P+  T+ VLI+GLCK+G    AF++F  ++     +  V +Y  +I G C   
Sbjct: 176 MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK-RLEVVSYNTLIMGLCNNG 234

Query: 347 KMNRAEMLLERMKEQG--LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           K++ A  L   + E G  + P+  T+ ++I G CK G  ++A ++ D M + G   N++ 
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            + +I    K G + +A EL K+  +  L     TY++++    K      A GLF RM 
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            +GL+P +  Y TL+A+ C++  ++++ + FQE   +   P   ++  MI G L+ G+I 
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           SA +    M Q+G  PD  TY + I+ L K  +++EA   ++SMI  GI+P
Sbjct: 415 SAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITP 465



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 220/456 (48%), Gaps = 42/456 (9%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++   C+  R+ +A   L  M       ++ T  +L+   C +G    ++
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEG---RVE 62

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL EM RKG + +V  ++ LI G C KG  ++   LF +++      PNV  Y+ +
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK-GISPNVVVYSCL 121

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK+     A  +L  M E+G+ P+  TYT +I G CK G   +A DL DLM ++G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +I+GLCK+G + +A+++ +   ++  + + ++Y  L+       +  +A+ 
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 459 LFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           LF  +++ G  + PD+  + T+I   C++ ++ ++ + +   I  G F    T   +I  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y++ G I  A++ ++R++++G  P + TY  +I G CK   L+ A   +  M   G+SP 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP- 360

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
                TL ++Y                         NTL+  LC E  +  A   F ++ 
Sbjct: 361 -----TL-FDY-------------------------NTLMASLCKESSLEQARRLFQEMK 389

Query: 637 GKDQNVDRVSLAALKNACYESNKY----ALFSDLSQ 668
             +   D +S   + +   ++        L +D+ Q
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 200/439 (45%), Gaps = 39/439 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++S F   G L  G ++  EM   G+       + ++   C+ GL   A  V   M
Sbjct: 82  VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  D  +Y  M+   C+ GR  +A      M ++G      T  +LI   C +G  
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEG-- 199

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-KPNVH 333
             I  AF++ E M+ KG +  V ++  LI GLC  G  ++A +LF  L+   NY +P+V 
Sbjct: 200 -CIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVI 258

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQG------------------------------- 362
           T+  +I G CKE ++++A  + + M E+G                               
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318

Query: 363 ----LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
               L+P++ TY+ +I G CK+     A  L   M   G +P ++ YN ++  LCK+  +
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSL 378

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           ++A  L ++  +   + D I++ I++   LK  +   A  L   M + GL PD + Y++ 
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I    +  +M+E++  F   I +G+ P    Y S+I G+  +  I   +   ++M  +G 
Sbjct: 439 INRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498

Query: 539 APDNITYGALISGLCKQSK 557
             D     ++++ LC  ++
Sbjct: 499 ILDLEITNSILTFLCNSAE 517



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 5/284 (1%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           MK   +LP+  +Y ++I G CK    E+A DL+  M    C PN + Y  ++DGLCK+GR
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V+EA  LL +  ++ L+ D + Y+ L+S    +    +   LF  M++ G++P++  Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  FC++   +E+          G+ P   TYT MI G  +DG    A+  F  M + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P  +TY  LI+GLCK+  + +A + +E+M+ KG     V+  TL    C  G    AM
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 598 IILESLDK-----KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            +  SL +     +  + T NT+I+ LC E R+  A   +  ++
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI 284



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 2/279 (0%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P++ +Y  +I+G CKE+++ +A  LL  M+     PN+ TY  L+ G CK G  E A
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+  M ++G   ++  Y+ +I G C KG +     L  +  ++ +  + + Y+ L++ 
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+   ++A  +   M + G+ PD++ YT +I   C+  + +++   F      G  P+
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY  +I G  ++G I  A K F+ M + G   + ++Y  LI GLC   KLDEA + + 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 567 SMIGKG--ISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           S++  G  + P  +T  T+    CK+G    A+ I +++
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 4/436 (0%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++K  ++ +  +   G P  +   N V+   C  G V  A EVFD M   G   D  SY 
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V   C+ G V      L  M   G   +  + + L+   C  G    ++ AFEL + +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG---RVELAFELFKRL 379

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G+K +   +++++ G C+    E  + L+  +V   N+ P+ + Y+++I  YC+  +
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH-NFVPDAYNYSSLIYAYCRHRQ 438

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  + E M   G+ PN  T T L++G    G    A+  +D + + G  PN+  Y  
Sbjct: 439 LKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRV 498

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           II+GLCK  +  + + +     +R    D + Y+I++   +K  + ++A  L+ +MV  G
Sbjct: 499 IINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  YT+LI   C   K+ E    F+  I  GL P +  YTS+I  Y +  N+ +A+
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAAL 618

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F+ M   G + D+  Y  LI G  K   +D A  F E M+ KG++P  VT   L   Y
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGY 678

Query: 588 CKQGDSATAMIILESL 603
            K GD   AM++  S+
Sbjct: 679 FKIGDEKKAMVMYNSM 694



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 216/408 (52%), Gaps = 7/408 (1%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G +  +++A ELL EM  +G +PN  T+   + GLC+    + A+  FL+++    Y  N
Sbjct: 224 GAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWN-FLQMLCQRGYPCN 282

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            + + A+I G+C + ++++A  + + MK+ G +P+ ++Y+ L+ G CK G+    Y ++ 
Sbjct: 283 SYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLV 342

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G TPN+ +Y++++ GLC+ GRV+ A+EL K+   +  + D I Y+I+L    +  
Sbjct: 343 EMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + +    L+  MV     PD + Y++LI A+CR +++KE+ + F+  I  G+ P   T T
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCT 462

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++ G+  +G I  A  +  ++ Q G  P+  TY  +I+GLCK +K ++    +  MI +
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAM-IILESLDK--KLWIRTVNTLIRKLCSEKRVGMA 628
           G  P  V    +   + K  D   A  +  + +D+  K  I T  +LI  LC + ++   
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACY--ESNKYALFSDLSQRIAEGI 674
              F  ++G+    DR+   +L  ACY   SN  A      +   EG+
Sbjct: 583 MTLFKHMIGEGLTPDRILYTSLI-ACYCKRSNMKAALEIFREMETEGL 629



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 193/384 (50%), Gaps = 6/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V    + G +  G+ M++EM  NG+ P + S  + + G+ C  G VE A E+F  +  +
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGL-CRAGRVELAFELFKRLKDQ 382

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y +++   C+   +       + M+    + D    + LI A+C       +
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCR---HRQL 439

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K+A E+ E M+  G  PNV T T+L+ G   +G   +AF LFL  VR     PN+ TY  
Sbjct: 440 KEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAF-LFLDKVRQFGVVPNLCTYRV 498

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G CK  K N    +   M ++G +P+T  Y+ +I G  K  + + A+ L   M  EG
Sbjct: 499 IINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PNI+ Y ++I+GLC   ++ E   L K      L  D+I YT L++ + K++  K AL
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAAL 618

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M   GL+ D   YT LI  F +   M  ++ F +E +  GL PT  TYT +I GY
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGY 678

Query: 518 LRDGNISSAVKYFQRMNQIGCAPD 541
            + G+   A+  +  M Q G APD
Sbjct: 679 FKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 209/403 (51%), Gaps = 4/403 (0%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A+E+  EM   GV  +A++Y   +   CR  +V  A  +L  +  RG   ++     
Sbjct: 229 LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNA 288

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I  FC  G    + +A E+ + M + G+ P+V+++++L+DGLCK+G     + + +++ 
Sbjct: 289 VIHGFCHDG---QVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R +   PN+ +Y++++ G C+  ++  A  L +R+K+QG   +   Y+ +++G C+  + 
Sbjct: 346 R-NGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDL 404

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E  YDL + M      P+ Y Y+++I   C+  +++EA E+ +      +  + +T TIL
Sbjct: 405 EICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTIL 464

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +     +    +A     ++ + G+ P++  Y  +I   C+  K  +    F + I  G 
Sbjct: 465 VHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGY 524

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y+ +I G+++  ++  A + + +M   G  P+  TY +LI+GLC   KL E   
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMT 584

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            ++ MIG+G++P  +   +L   YCK+ +   A+ I   ++ +
Sbjct: 585 LFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETE 627



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 44/349 (12%)

Query: 330 PNVHTYTAMISGYCKEEKM--NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           PN+++Y+ ++S Y    K+    A+ LL  M+ +G+ PN  TY + +YG C+    + A+
Sbjct: 209 PNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAW 268

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           + + ++ + G   N Y +NA+I G C  G+V +A E+                       
Sbjct: 269 NFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEV----------------------- 305

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
                       F  M K G  PD+H+Y+ L+   C+Q  +        E    G+ P  
Sbjct: 306 ------------FDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNL 353

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            +Y+S++ G  R G +  A + F+R+   G   D+I Y  ++ G C+   L+     +  
Sbjct: 354 VSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWND 413

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKR 624
           M+     P      +L Y YC+      A+ + E +        + T   L+    +E  
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGL 473

Query: 625 VGMAALFFHKL--LGKDQNV--DRVSLAALKNACYESNKYALFSDLSQR 669
           +G A LF  K+   G   N+   RV +  L      ++ + +F+D+ +R
Sbjct: 474 IGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 6/457 (1%)

Query: 149 FERAHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           F   H V  +  +++    +  +    S++ +M   G+     T N ++   C  G ++ 
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F+EM  RG   D  SY  ++   C+ G  + A + L  M ++G   +    T +I 
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           + C       +  A +LL EMV +G  P+V T++ ++ G C  G   +A  LF ++V   
Sbjct: 241 SLCKDTL---VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV-GR 296

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  PN  T+T ++ G CKE  ++ A  + E M ++G  PN  TY +L+ G+C     + A
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++D+M  +GC P +++YN +I+G CK+ R+ EA  LL +  ++EL  D +TY+ L+  
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++AL LF  M  +GL PD+  Y+TL+   C+   + E+ K  +    + + P 
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y  +I G    G +  A + F ++   G  P   TY  +I GL K+   DEA + + 
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            M   G  P   +   +   + +  DS+TA+ +++ +
Sbjct: 537 KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 235/502 (46%), Gaps = 17/502 (3%)

Query: 162 SFAEIGRL------KEGFSMVIEMTNN----GLPLITSTLNRVVGIACELGLVEYAEEVF 211
           S  E GR       K+ +S V+ + N     G+     +LN ++   C L  V +A  V 
Sbjct: 91  SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            +M   G+  DA ++  ++   C  G + EA    + M+ RG   D  + + +I   C  
Sbjct: 151 GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G+   A +LL +M  KG KPN+  +T +ID LCK      A  L  ++V      P+
Sbjct: 211 ---GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV-DRGIPPD 266

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY+ ++ G+C    +N A +L   M  + ++PNT T+T L+ G CK G    A  + +
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K+G  PN Y YNA++DG C   ++ EA ++L     +       +Y IL++ + K+ 
Sbjct: 327 AMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR 386

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  L   M +  L PD   Y+TL+   C+  + +E+   F+E  ++GL P   TY+
Sbjct: 387 RLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G  + G++  A+K  + M +    PD + Y  LI G+    KL+ A + +  +   
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFAD 506

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMA 628
           GI P   T   +     K+G S  A  +   ++   ++    + N +I+     +    A
Sbjct: 507 GIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTA 566

Query: 629 ALFFHKLLGKDQNVDRVSLAAL 650
                +++GK  + D  +   L
Sbjct: 567 IRLIDEMVGKRFSADSSTFQML 588



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 182/366 (49%), Gaps = 4/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  +   + +   ++ EM + G+P    T + ++   C LG +  A  +F+EM  R 
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  ++ ++V   C+ G V+EA     AM  +GA  +  T   L+  +C       + 
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYC---LNNQMD 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L+ MV KG  P V+++ +LI+G CK+   ++A  L +++   +   P+  TY+ +
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE-LTPDTVTYSTL 413

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  +   A  L + M   GLLP+  TY++L+ G CK G+ + A  L+  M +   
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN +I+G+   G+++ A EL  K F   +Q    TYTI++   LK+  + +A  
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +M   G  P+  +Y  +I  F + +    + +   E +         T+  ++    
Sbjct: 534 LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLES 593

Query: 519 RDGNIS 524
           RD  IS
Sbjct: 594 RDEIIS 599



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 180/367 (49%), Gaps = 12/367 (3%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---KPNV 332
           SI  A      M+R   +P+V      +  + KK    K +   + L    +      NV
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKK----KQYSTVVSLCNQMDLFGVTHNV 127

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           ++   +I+  C+   +  A  +L +M + G+ P+  T+ +LI G C  G  + A  L + 
Sbjct: 128 YSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNE 187

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P++ +Y+ +I+GLCK G    A +LL+K  ++  + + + YT ++    K   
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+ L   MV  G+ PD+  Y+T++  FC    + E+   F E +   + P   T+T 
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G  ++G +S A   F+ M + G  P+  TY AL+ G C  +++DEA +  + M+ KG
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367

Query: 573 ISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMA 628
            +P   +   L   YCK+   D A ++++ E  +K+L   TV  +TL++ LC   R   A
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLV-EMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426

Query: 629 ALFFHKL 635
              F ++
Sbjct: 427 LNLFKEM 433


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 254/556 (45%), Gaps = 54/556 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E  ++ + M  +     T     +V   CE G  E AE + +E  + G   +   Y
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC  G +  A +    M       +  T T LI   C  G    +++A  L   
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG---KVERAMVLFSR 272

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G +PNV T+T LI G C +G  + AFRL L L+ ++   PN  T++ +I   CK E
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL-LHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  A++ L  + ++G+  N   YTSLI G CK G  + A +LM  M  EG  P+ ++Y+
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLC++ ++ +A  +L+   ++ +QA  +TYTI++ E +++  ++    +F +M+  
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT 451

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+NPDI  YT  + ++C + +M+++E    + +  G+FP   TY ++I GY   G +S A
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511

Query: 527 VKYFQRMNQIGCAPDNITYGAL-------------------------------------- 548
              F+ M   G  P+  +Y  L                                      
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLP 571

Query: 549 ---------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
                    I  LC+  +L+EA  F+  M    ++P E    ++    C+      A+ +
Sbjct: 572 LAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTL 631

Query: 600 LESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
           L+S+ K  ++  + +   +I  LC       A   F  LL K+ N D +    L     +
Sbjct: 632 LDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQ 691

Query: 657 SNKYALFSDLSQRIAE 672
               A FS L   + E
Sbjct: 692 KGSVAEFSSLLSVMKE 707



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 210/454 (46%), Gaps = 39/454 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   ++   C  G +  A++    +   G+  D+ +Y   V+ YCR G +T A R    M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM---------------------- 287
             RG +    T T L+      G    +++A  +   M                      
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGM---VREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 288 -------------VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
                        +  G++PN+  +  LIDG C  G  E A ++F + +  +   PNV T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRT 249

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G CK  K+ RA +L  RM E GL PN  TYT+LI G C  G+ + A+ L+ LM 
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  PN + ++ +ID LCK+ +V+EA   L    ++ ++ +++ YT L+    K  +  
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L  +M+  G  PD H+Y++LI   CRQKK+ ++    ++ +  G+  +  TYT +I
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              +R+       K F +M   G  PD +TY   +   C++ ++++A      M+ +G+ 
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           P  VT  TL   Y   G  + A    E +  K W
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 218/477 (45%), Gaps = 42/477 (8%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI---------------GRLKEGFSMVI 177
           +R Y      L  +G  ERA  +   MV +  E                G L+  F ++ 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  NGL     T + ++   C+   VE A+     +  +GV  +   Y  ++   C+ G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++  AD  +  M+  G + D  + + LI   C +     + QA  +LE+M+ KG + +  
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK---KLSQATLMLEDMMEKGIQASPV 423

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T++ID L ++  +E   ++F K++ +    P++ TYT  +  YC+E +M  AE ++ +
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M ++G+ PN  TY +LI G+  +G   +A+   ++M  +G  PN  +Y  ++  + KK  
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
              + ++ K A  ++LQ        +L E + + +               L  DI  Y+ 
Sbjct: 543 SDNSVDIWKIADMKDLQ--------VLLEDITERQLP-------------LAADI--YSC 579

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            I   CR  +++E++ FF     A L P+++ YTS+I    R   ++ A+     M + G
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSG 639

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             P   +Y  +IS LC+      A + +  ++ K  +  E+    L Y   ++G  A
Sbjct: 640 YLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVA 696



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 4/361 (1%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           F  +E +  +    N+ T+T LI+  C  G    A +    L+ +    P+ + YT+ + 
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVL 115

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYC+   +  A  +   M  +G L    TYT+L++G    G    A  +   M  + C P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           + + Y  ++ GLC+ GR +EA  LL++A     + + + Y  L+  +    E + AL +F
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M     +P++  YT LI   C+  K++ +   F   + AGL P   TYT++I G   +
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++  A +    M   G  P++ T+  LI  LCK+ K++EA  F  S++ KG+   EV  
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            +L    CK G    A  +++ +  + ++    + ++LI  LC +K++  A L    ++ 
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415

Query: 638 K 638
           K
Sbjct: 416 K 416



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 124/350 (35%), Gaps = 82/350 (23%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P +   N ++  L +     +   L  +   R L+    TYT L++ +    +   A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              ++ AGL PD +AYT+ +  +CR   +  + + F      G   T  TYT+++ G L 
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 520 DGNISSAVKYFQRMNQIGCAPDN-----------------------------------IT 544
            G +  A+  F  M    CAPD                                    + 
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---- 600
           Y ALI G C   +++ A + +E M G   SP   T   L +  CK G    AM++     
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 601 ------------------------------------ESLDKKLWIRTVNTLIRKLCSEKR 624
                                                 L    W  T + LI  LC  ++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW--TFSVLIDALCKREK 332

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR-IAEG 673
           V  A LF   L+ K   V+ V   +L +   ++ K     +L Q+ I+EG
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 216/441 (48%), Gaps = 10/441 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E   ++E   +++ M  +G  L   T   ++   C+ G +  A  V +EM  RG
Sbjct: 166 LIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRG 225

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  M+  YC+ GR+ +A    + M   G   D+ T  +LI   C +       
Sbjct: 226 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE----KPD 281

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL + + +G+ P V T T +I+G CK    + A R+   ++ S N K ++  Y  +
Sbjct: 282 EAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSML-SSNCKLDLQAYGVL 340

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+   K+ +   A+  +  M   GL PN   YTS+I G+CKVG    A ++  LM  EGC
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y+++I GL +  ++ +A  L+ K  +  +    ITYT L+    K+ E   A  
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + GL PD  AY  L  A C+  + +E+  F    +  G+  TK TYTS++ G+ 
Sbjct: 461 LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 517

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN   A    ++M   GC  D+ TY  L+  LCKQ KL+EA    + M   G+    V
Sbjct: 518 KAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIV 577

Query: 579 TRVTLAYEYCKQG--DSATAM 597
               +  E  K+G  D A +M
Sbjct: 578 AYTIIISEMIKEGKHDHAKSM 598



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 200/436 (45%), Gaps = 38/436 (8%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +++A  LL  M   G + N Y++T+LI GLC+     +A  L + +V+ D    N+HT
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQ-DGCSLNLHT 197

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G CKE +++ A  +LE M  +G++P+  TY ++I G+CK G  + A  +  LM 
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P+ + YN +I GLC + +  EA ELL  A  R      IT+T +++ + K     
Sbjct: 258 RNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL +   M+ +    D+ AY  LI    ++ + KE+++   E    GL P    YTS+I
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDN-------------------------------- 542
            GY + G + +A++ F+ M   GC P+                                 
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 543 ---ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
              ITY  LI G CK+ + D A + +E M   G++P E     L +  CK G +  A   
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF 496

Query: 600 LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
           L      L   T  +L+           AA+   K++ +    D  + + L  A C +  
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKK 556

Query: 659 KYALFSDLSQRIAEGI 674
                S L Q    G+
Sbjct: 557 LNEALSILDQMTLSGV 572



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 255/630 (40%), Gaps = 127/630 (20%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + GR+K+   +   M  NG      T N ++   C     E AEE+ ++   RG
Sbjct: 236 MIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRG 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++  YC+  R+ +A R  ++ML     LD     +LI     K      K
Sbjct: 295 FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKC---RFK 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------WT----- 312
           +A E + EM   G  PNV  +T +IDG CK G                     WT     
Sbjct: 352 EAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLI 411

Query: 313 ---------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                     KA  L  K+ + D   P V TYT +I G CK+ + + A  L E M++ GL
Sbjct: 412 YGLIQDQKLHKAMALITKM-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470

Query: 364 LPNTN--------------------------------TYTSLIYGHCKVGNFERAYDLMD 391
            P+                                  TYTSL+ G  K GN + A  L++
Sbjct: 471 TPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 530

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC  + Y Y+ ++  LCK+ ++ EA  +L +     ++ + + YTI++SE +K+ 
Sbjct: 531 KMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEG 590

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  +F  M+ +G  P    YT  I+++C+  +++E+E    E    G+ P   TY 
Sbjct: 591 KHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYN 650

Query: 512 SMI--CGY-------------------------------------LRDGN---------- 522
             I  CG+                                     L D +          
Sbjct: 651 VFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNW 710

Query: 523 --ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             + +  +  +RM + G  P  +TY ++I+G CK ++L+EAC  ++ M GK ISP E   
Sbjct: 711 IELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIY 770

Query: 581 VTLAYEYCKQ---GDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L    C     G + + +  +     +  + + + LI  LC E     A   F  LLG
Sbjct: 771 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLG 830

Query: 638 -KDQNVDRVSLAALKNACYESNKYALFSDL 666
            +D N + V+   L +   ++      S L
Sbjct: 831 MEDYNHNEVAWKILNDGLLKAGHVDFCSQL 860



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 188/453 (41%), Gaps = 59/453 (13%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L +  +++ +M  +G+     T   ++   C+    + A  +F+ M   G+  D  +Y 
Sbjct: 419 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 478

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++  A C+ GR  EA    S ++ +G +L   T T L+  F   G   +   A  L+E+M
Sbjct: 479 VLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAG---NTDFAAVLIEKM 532

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V +G K + YT++VL+  LCK+    +A  +  ++  S   K N+  YT +IS   KE K
Sbjct: 533 VNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLS-GVKCNIVAYTIIISEMIKEGK 591

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A+ +   M   G  P+  TYT  I  +CK+G  E A  L+  M ++G  P++  YN 
Sbjct: 592 HDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNV 651

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA---------------- 451
            I+G    G +  A+  LK+      + +  TY ILL   LK +                
Sbjct: 652 FINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWI 711

Query: 452 ETKQALGLFCRMVKAGLNP-------------------------------DI----HAYT 476
           E      L  RMVK GLNP                               DI      YT
Sbjct: 712 ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYT 771

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF-QRMNQ 535
            LI   C  K   ++  F  + I  G  P  E+Y  +I G   +G+   A   F   +  
Sbjct: 772 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGM 831

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
                + + +  L  GL K   +D   Q   +M
Sbjct: 832 EDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAM 864



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 16/307 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G+     SM  EM ++G     +T    +   C++G +E AE +  EM   G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-- 276
           V  D  +Y + +     MG +  A   L  M+D     +  T  +L+  F       +  
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHY 701

Query: 277 -----------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                      +   ++LLE MV+ G  P   T++ +I G CK    E+A  LF  + R 
Sbjct: 702 VDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHM-RG 760

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            +  PN   YT +I   C  +   +A   +  M E G  P+  +Y  LI G C  G++++
Sbjct: 761 KDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDK 820

Query: 386 AYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           A  L  DL+G E    N  A+  + DGL K G V    +LL     R  Q D  TY+ ++
Sbjct: 821 AKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYS-MV 879

Query: 445 SEHLKQA 451
           ++++ +A
Sbjct: 880 TDNIHEA 886



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/415 (21%), Positives = 167/415 (40%), Gaps = 56/415 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F++ G       ++ +M N G    + T + ++   C+   +  A  + D+M   G
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y +++    + G+   A    + M+  G      T T+ I+++C  G    I+
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIG---QIE 628

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ EM R G  P+V T+ V I+G    G+ ++AF    +++ + + +PN  TY  +
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDA-SCEPNYWTYWIL 687

Query: 339 I----------------SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +                SG     +++    LLERM + GL P   TY+S+I G CK   
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A  L D M  +  +PN   Y  +I   C             K F +           
Sbjct: 748 LEEACVLFDHMRGKDISPNEEIYTMLIKCCCD-----------IKLFGK----------- 785

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
                        A+     M++ G  P + +Y  LI   C +    +++  F + +   
Sbjct: 786 -------------AVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGME 832

Query: 503 LFPTKETYTSMIC-GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
            +   E    ++  G L+ G++    +    M    C  D+ TY  +   + + S
Sbjct: 833 DYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEAS 887


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 161/629 (25%), Positives = 284/629 (45%), Gaps = 32/629 (5%)

Query: 36  HHNFLANSKQPAFS------STSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQ 89
           HHN   N  Q  F       S+ S  S  Q L   + +++L+  +++       P  N  
Sbjct: 12  HHN--QNQNQNLFHLLLKPFSSLSPNSLQQDLPSQIFTILLQPQWRK------NPSFNTL 63

Query: 90  IDIDSLTHEQAITVVASLANEAG--SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNG 147
           I   + TH      ++SL N      + AL+FF W      F H +  Y      L+ NG
Sbjct: 64  IPSLTPTH------LSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNG 117

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
               A  V   M+ S       +   ++   +T++   L  ++ NR+  +    GL++  
Sbjct: 118 FLRAAENVRNSMIKSCVSSHEARFVLNL---LTHHEFSLSVTSYNRLFMVLSRFGLIDEL 174

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             +F +M   GV  +  S+  MV A+C++G V  A  +   ++  G   D+ T T LI  
Sbjct: 175 NCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILG 234

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +C     G   + FE+   M ++G   N  ++T LI G C+ G  ++A  LF ++ + D 
Sbjct: 235 YCKIHELGDAYKVFEI---MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQM-KEDG 290

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V TYT +++ +C+  K   A    E M E G+ PN  TYT LI   CKVG  +   
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +++  M ++G   ++  +NA+IDG CK+G +++A  +L      ++  +  TY  L+   
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++    +A+ L  +M +  L+P++  Y TLI   C+ + +  + +     I  G  P +
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+ + I    + G +  A + F+ + +     +   Y ALI G CK  K  +A   ++ 
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKR 624
           M+ +G  P  +T   L     K+G    AM +++ +   D K  + T   LI ++  E  
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              A +F  +++      + V+  A   A
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKA 619



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 255/588 (43%), Gaps = 97/588 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F E+G++ E   +  +M  +G      T   +V   CE+G    A + F+EM   G
Sbjct: 266 LIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENG 325

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF----- 273
           +  +  +Y +++  +C++G++ E    LS ML++G +        LI  +C +G      
Sbjct: 326 IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAI 385

Query: 274 ---------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                      + S+ +A  LL +M      PN+ T+  LI GL
Sbjct: 386 CVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK    + A+RL   +++ D + P+  T+ A I   CK  K+ +A  + E +KE+    N
Sbjct: 446 CKARVVDSAWRLHHLMIK-DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YT+LI G+CK   F  A+ L   M  EGC PN   +N ++DGL K+G+V++A  L+ 
Sbjct: 505 EFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVD 564

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              + + +    TYTIL+ E L++++  +A     +M+ +G  P++  YT  I A+CRQ 
Sbjct: 565 VMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624

Query: 487 KMKESE----KFFQEAITAGLF-------------------------------PTKETYT 511
           ++ E+E    K  +E I    F                               P+++TY+
Sbjct: 625 RLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYS 684

Query: 512 SMIC-----GYLRDG---------------NISSAVKY------FQRMNQIGCAPDNITY 545
            ++       Y ++G               NI     +      F++M + GC P+  TY
Sbjct: 685 ILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTY 744

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-- 603
             LI GLCK   L  A + +  M   GISP E    +L    CK G    A+ +L+S+  
Sbjct: 745 SKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMME 804

Query: 604 -DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +    + +   L+  L  +     A   F  LL    N D V    L
Sbjct: 805 YNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVL 852



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 130/559 (23%), Positives = 216/559 (38%), Gaps = 135/559 (24%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F ++G++ EG  M+  M   GL       N ++   C+ G++E A  V D M    
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           VC ++ +Y  ++  +CR   +  A   L+ M +     +  T   LI   C       + 
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARV---VD 452

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+ L   M++ G+ P+  T    ID LCK G  E+A ++F  L +  + + N   YTA+
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL-KEKHAEANEFLYTAL 511

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK--- 395
           I GYCK EK + A +L +RM  +G  PN+ T+  L+ G  K G  E A  L+D+MGK   
Sbjct: 512 IDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA 571

Query: 396 --------------------------------EGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                                            GC PN+  Y A I   C++GR+ EA E
Sbjct: 572 KPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEE 631

Query: 424 L-----------------------------------LKKAFQRELQADKITYTILLSEHL 448
           +                                   L + F    +  + TY+ILL   +
Sbjct: 632 MVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLI 691

Query: 449 KQAETKQALGL--------------------------FCRMVKAGLNPDIHAYTTLIAAF 482
            +   K+ +GL                          F +MV+ G  P+++ Y+ LI   
Sbjct: 692 FEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751

Query: 483 CRQKKMKESEKFFQEAITAGLFPTK----------------------------------- 507
           C+ + +  + + F     +G+ P++                                   
Sbjct: 752 CKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHL 811

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           E+Y  ++CG    GN   A + F+ +   G   D + +  L+ GL ++  +DE  Q  + 
Sbjct: 812 ESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDI 871

Query: 568 MIGKGISPCEVTRVTLAYE 586
           M   G      T   L+ E
Sbjct: 872 MEKTGCRLHSDTHTMLSQE 890



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 19/395 (4%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAI--GFAKFRHFMRLYIVCATSLISNGNFERAHEV 155
           EQA  V  SL  +     A  F Y A+  G+ K   F   +++    L   G F  +   
Sbjct: 487 EQAHQVFESLKEKHAE--ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFE-GCFPNS-IT 542

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
              ++    + G++++  S+V  M          T   ++         + A    D+M 
Sbjct: 543 FNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI 602

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G   +  +Y   + AYCR GR+ EA+  +  + + G +LD+    +L+ A+   G  G
Sbjct: 603 SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY---GCIG 659

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  AF +L  M   G +P+  T+++L+  L  + + ++   L       D    N+   
Sbjct: 660 QLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL-------DLNSTNISVD 712

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A I      E +    ML E+M EQG +PN NTY+ LI G CKV +   A+ L + M +
Sbjct: 713 NANIWKIADFEIIT---MLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKE 769

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G +P+   +N+++   CK G  +EA  LL    +    A   +Y +L+    +Q   ++
Sbjct: 770 SGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEK 829

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           A  +F  ++  G N D   +  L+    R+  + E
Sbjct: 830 AEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDE 864


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 254/520 (48%), Gaps = 27/520 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +A  GR++E   ++  M+ +G+       N ++    + G +E A     E+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  DA ++   ++ Y + G++TEA ++   MLD G + +N   T+LI       F+
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH----FK 302

Query: 275 -GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G++ +A  +   +   G  P+V T +  I GL K G  ++A ++F +L +     P+V 
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL-KEKGLVPDVF 361

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+++ISG+CK+ ++ +A  L + M  +G+ PN   Y +L+ G CK G+ +RA  L D M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P+   Y+ +IDG CK   V EA+ L  +   + +Q     Y  L+    K+ + 
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++A+ LF  M++ G    + ++ TLI  +C+  K++E+ + FQE I   + P   TYT++
Sbjct: 482 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540

Query: 514 I-----CGYLRDGN------------ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           I      G + + N            + +    F++M   G  PD +TYG +I   CK+ 
Sbjct: 541 IDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 600

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
            L EA +  + ++GKG+         L    CK+ D   A  +L+ + +   K  +   +
Sbjct: 601 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACS 660

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           TL+R      ++  A   F  +       D  +L  L N 
Sbjct: 661 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 230/479 (48%), Gaps = 7/479 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL   T T   +    C    +  A+  F+EM   G+  D ++   ++  + R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + E  R    M+  G  ++  T  +LI   C     G +++A E+L+ M+  G KPN  T
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCK---FGKMEKAAEILKGMITLGCKPNSRT 117

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
             +LI+G C++    +A  L L  +   N  P+  +Y AMI+G C  + ++ A  LLE+M
Sbjct: 118 FCLLIEGYCREHNMGRALEL-LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 176

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              GL PN   Y++LI G+   G  E A  L+D M   G  P+I+ YNAII  L K G++
Sbjct: 177 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 236

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA   L +   R L+ D +T+   +  + K  +  +A   F  M+  GL P+   YT L
Sbjct: 237 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 296

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I    +   + E+   F+     G+ P  +T ++ I G L++G +  A+K F  + + G 
Sbjct: 297 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY +LISG CKQ ++++A + ++ M  KGI+P       L    CK GD   A  
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416

Query: 599 ILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           + + + +K       T +T+I   C  + V  A   FH++  K          AL + C
Sbjct: 417 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 226/533 (42%), Gaps = 72/533 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G + E   +   M + G+P+   T N ++   C+ G +E A E+   M   G
Sbjct: 51  LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 110

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ ++ L++  YCR   +  A   L  M  R  +    +   +I   C       + 
Sbjct: 111 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC---HCKDLS 167

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------- 318
            A +LLE+M   G KPNV  ++ LI G   +G  E+A RL                    
Sbjct: 168 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 227

Query: 319 --------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                         +L  ++    KP+  T+ A I GY K  KM  A    + M + GL+
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN   YT LI GH K GN   A  +   +   G  P++   +A I GL K GRVQEA ++
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +  ++ L  D  TY+ L+S   KQ E ++A  L   M   G+ P+I  Y  L+   C+
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              ++ + K F      GL P   TY++MI GY +  N++ A   F  M   G  P +  
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 467

Query: 545 YGALISGLCKQS----------------------------------KLDEACQFYESMIG 570
           Y AL+ G CK+                                   K+ EA Q ++ MI 
Sbjct: 468 YNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 527

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTVNTLIRKLCSE 622
           K I P  VT  T+   +CK G    A ++ + + ++ L + TV  L  K+ ++
Sbjct: 528 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAK 580



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 227/465 (48%), Gaps = 30/465 (6%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGL----PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ G++ E      EM ++GL    PL T  +N       + G +  A  +F  + 
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF----KAGNLMEALSIFRHLH 317

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A GV  D  +    +    + GRV EA +  S + ++G + D  T + LI+ FC    +G
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK---QG 374

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++AFEL +EM  KG  PN++ +  L+DGLCK G  ++A +LF  +      +P+  TY
Sbjct: 375 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTY 433

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + MI GYCK E +  A  L   M  +G+ P++  Y +L++G CK G+ E+A +L   M +
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G    + ++N +IDG CK  ++QEA +L ++   +++  D +TYT ++  H K  + ++
Sbjct: 494 KGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552

Query: 456 A-----------------LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           A                   LF +MV  G+ PD   Y  +I A C++  + E+ K   E 
Sbjct: 553 ANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 612

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+      +  +I    +  +++ A K    M ++G  P       L+    +  K+
Sbjct: 613 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 672

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           DEA + +E +   G+ P   T + L        DS  A  +++ L
Sbjct: 673 DEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 233/481 (48%), Gaps = 20/481 (4%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M +  +P    T   V+   C +  ++ A  +  +M   G   ++  Y+ ++ +  +  
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV EA + L  M   G + D  T   +I   C       I +A +++  M+ +G+ P+  
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCK---FDRINEAAKMVNRMLIRGFAPDDI 323

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  L++GLCK G  + A  LF ++      KP +  +  +I G+    +++ A+ +L  
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378

Query: 358 M-KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           M    G++P+  TY SLIYG+ K G    A +++  M  +GC PN+Y+Y  ++DG CK G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++ EAY +L +     L+ + + +  L+S   K+    +A+ +F  M + G  PD++ + 
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI+  C   ++K +    ++ I+ G+     TY ++I  +LR G I  A K    M   
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G   D ITY +LI GLC+  ++D+A   +E M+  G +P  ++   L    C+ G    A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618

Query: 597 MIILESLDKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
           +       K++ +R       T N+LI  LC   R+      F KL  +    D V+   
Sbjct: 619 V----EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674

Query: 650 L 650
           L
Sbjct: 675 L 675



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 227/465 (48%), Gaps = 10/465 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +F  +  +    S++ +MT +G    +     ++    +   V  A ++ +EM   G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA ++  +++  C+  R+ EA + ++ ML RG   D+ T   L+   C  G   + K
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F  +        KP +     LI G    G  + A  +   +V S    P+V TY ++
Sbjct: 343 DLFYRIP-------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY KE  +  A  +L  M+ +G  PN  +YT L+ G CK+G  + AY++++ M  +G 
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +N +I   CK+ R+ EA E+ ++  ++  + D  T+  L+S   +  E K AL 
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+  G+  +   Y TLI AF R+ ++KE+ K   E +  G    + TY S+I G  
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F++M + G AP NI+   LI+GLC+   ++EA +F + M+ +G +P  V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635

Query: 579 TRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLC 620
           T  +L    C+ G   D  T    L++        T NTL+  LC
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 219/448 (48%), Gaps = 9/448 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + Q ++ S ++  R+ E   ++ EM   G      T N V+   C+   +  A ++ + M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   D  +Y  ++   C++GRV  A      +     ++ N  +   +T        
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT-------H 366

Query: 275 GSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G +  A  +L +MV   G  P+V T+  LI G  K+G    A  + L  +R+   KPNV+
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV-LHDMRNKGCKPNVY 425

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +YT ++ G+CK  K++ A  +L  M   GL PNT  +  LI   CK      A ++   M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++GC P++Y +N++I GLC+   ++ A  LL+      + A+ +TY  L++  L++ E 
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K+A  L   MV  G   D   Y +LI   CR  ++ ++   F++ +  G  P+  +   +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  R G +  AV++ + M   G  PD +T+ +LI+GLC+  ++++    +  +  +GI
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILE 601
            P  VT  TL    CK G    A ++L+
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLD 693



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 221/520 (42%), Gaps = 25/520 (4%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           S   +  + +V Q ++      G  K    ++I+M + G+    S    ++    + G  
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162

Query: 205 EYAEEVFDEMCARGVCADASSYK-------LMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
                +  EM  R V +   ++K       ++V   C       A      ML R     
Sbjct: 163 GQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPT 216

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  +++ AFC       I  A  LL +M + G  PN   +  LI  L K     +A +
Sbjct: 217 LFTFGVVMKAFCAVN---EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  ++       P+  T+  +I G CK +++N A  ++ RM  +G  P+  TY  L+ G 
Sbjct: 274 LLEEMFLM-GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQAD 436
           CK+G  + A DL   + K    P I  +N +I G    GR+ +A  +L        +  D
Sbjct: 333 CKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY  L+  + K+     AL +   M   G  P++++YT L+  FC+  K+ E+     
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    GL P    +  +I  + ++  I  AV+ F+ M + GC PD  T+ +LISGLC+  
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
           ++  A      MI +G+    VT  TL   + ++G+   A  ++  +      L   T N
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +LI+ LC    V  A   F K+L        +S   L N 
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+ G V +A +V D M 
Sbjct: 268 VNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLML 327

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y  ++    + G + EA   ++ M+DRG + D  T   LI A C +    
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN--- 384

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  E+  KG  P+VYT  +LI+ LCK G      RLF ++ +S    P+  TY
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTY 443

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+  A  LL+ M+  G   +T TY ++I   CK    E A ++ D M  
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G + +   +N +IDGLCK  R+ +A EL+++  +  LQ   ITY  +L+ + KQ + K+
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  +I 
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  N+  A+  F+ M ++G  PD +TY  +  GLC+    + EA  F   M+ KG  
Sbjct: 624 SLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFM 683

Query: 575 P 575
           P
Sbjct: 684 P 684



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 236/496 (47%), Gaps = 8/496 (1%)

Query: 108 ANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIG 167
            +EAG+ V  SF      +A+ R F     +    L + G  +    V   +++  AE  
Sbjct: 119 GHEAGAGVVRSFVE---SYARLRRFDDAVDLVRNQLNTFG-VQADTAVYNHLLNVLAEGS 174

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+K   S+  EMT+ G+     TLN ++   C    V  A  + +EM +  V  D +++ 
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  +   G +  A R  + M++ G      T+ +LI  +C  G    ++ A   +++ 
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMG---RVEDALGYIQKE 291

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +  G++P+  T+   +  LC+ G    A ++ + L+  + + P+V TY  +I+   K  +
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKV-MDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A+ ++ +M ++G LP+T T+ +LI   C     E A DL   +  +G +P++Y +N 
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+ LCK G       L ++        D++TY IL+       +   AL L   M   G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
                  Y T+I A C+Q +++E+E+ F +    G+  +  T+ ++I G  +   I  A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  ++M + G  P NITY ++++  CKQ  L +A    E+M   G     VT  TL    
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 588 CKQGDSATAMIILESL 603
           CK G +  A+ +L  +
Sbjct: 591 CKAGRTQVALKLLRGM 606



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 205/457 (44%), Gaps = 42/457 (9%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V +++   GV AD + Y  ++       R+   +   + M DRG   D  TL  LI A C
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                  ++ A  +LEEM      P+  T T L+ G  ++G  E A R+  K++ +    
Sbjct: 207 RAH---QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET-GCS 262

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P   T   +I+GYCK  ++  A   +++    G  P+  TY + ++  C+ G+   A  +
Sbjct: 263 PTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKV 322

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           MDLM +EG  P+++ YN +I+ L K G + EA  ++ +   R    D  T+  L+     
Sbjct: 323 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCS 382

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           Q   ++AL L   +   GL+PD++ +  LI A C+        + F+E  ++G  P + T
Sbjct: 383 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVT 442

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY------------------------ 545
           Y  +I      G + +A+   + M   GC    +TY                        
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502

Query: 546 -----------GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                        LI GLCK  ++D+A +  E M+ +G+ P  +T  ++   YCKQGD  
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLK 562

Query: 595 TAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
            A  ILE++     ++ + T  TLI  LC   R  +A
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 599



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 192/440 (43%), Gaps = 10/440 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNAT 260
           G  +  E +  EM   G  A A   +  V +Y R+ R  +A   +   L+  G   D A 
Sbjct: 103 GAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAV 162

Query: 261 LTLLITAFCDKGFRGSIKQAFE-LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              L+    +    GS  +  E +  EM  +G +P+V T   LI  LC+      A  L 
Sbjct: 163 YNHLLNVLAE----GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAV-LM 217

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L+ + S    P+  T+T ++ G+ +E  +  A  +  +M E G  P   T   LI G+CK
Sbjct: 218 LEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCK 277

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +G  E A   +     +G  P+   YN  +  LC+ G V  A +++    Q     D  T
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  +++   K  E  +A G+  +MV  G  PD   + TLI A C Q +++E+    +E  
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   T+  +I    + G+    ++ F+ M   GCAPD +TY  LI  LC   KL 
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
            A    + M   G     VT  T+    CKQ     A  + + +D     R   T NTLI
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 617 RKLCSEKRVGMAALFFHKLL 636
             LC  KR+  A     +++
Sbjct: 518 DGLCKAKRIDDATELIEQMV 537



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 16/317 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G+L     ++ EM +NG P  T T N ++   C+   +E AEEVFD+M A G
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A ++  ++   C+  R+ +A   +  M+  G    N T   ++T +C +G    +K
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG---DLK 562

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A +L L+ +R    +P    Y  +
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL-LRGMRIKGIRPTPKAYNPV 621

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           I    +   +  A  L   M E G  P+  TY  +  G C+ G   + A+D +  M  +G
Sbjct: 622 IQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKG 681

Query: 398 CTPNIYAYNAIIDGLCKKGR---VQEAYEL-LKKAFQRELQADKITYTILLSEHLKQAET 453
             P   ++  + +GL   G    +  A EL ++KA  RE     I        +LK  + 
Sbjct: 682 FMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDVSAI------RGYLKIRKY 735

Query: 454 KQALGLFCRMVKAGLNP 470
             AL  F R+++   NP
Sbjct: 736 YDALATFGRLLEIN-NP 751


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 219/450 (48%), Gaps = 20/450 (4%)

Query: 141 TSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
            +L+ NG    AH V Q                MV++F + G++ E    V +M N G+ 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T + ++     LG VE A+ V   M  +GV  +  +Y L++  YC+  ++ EA++ 
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 246 LSAMLDRGAIL-DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           L  M +  A++ D     +LI  +C  G    I  A  LL+EM+R G K N++    LI+
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLIN 375

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G CK+G   +A  +  ++V   N KP+ ++Y  ++ GYC+E   + A  L ++M ++G+ 
Sbjct: 376 GYCKRGEIHEAEGVITRMVDW-NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P   TY +L+ G C+VG F+ A  +  LM K G  P+   Y+ ++DGL K    + A  L
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K    R     +IT+  ++S   K  +  +A  +F +M   G +PD   Y TLI  +C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              + ++ K         + P+ E Y S+I G  +   +         M   G  P+ +T
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGIS 574
           YGALI G CK+  LD+A   Y  M   G+S
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLS 644



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/584 (26%), Positives = 272/584 (46%), Gaps = 37/584 (6%)

Query: 53  SSPSPPQSLVKTVCSMVLESYYQQFHLR--SSPPRLNLQIDIDSLTHEQAITVVASLAN- 109
           S P+PP+ LV  +C +VL        LR  ++  +LN     D         V A L N 
Sbjct: 36  SHPAPPE-LVSRICRLVL--------LRRCNAISKLNFVFSDD--------IVDAVLRNL 78

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCA-TSLISNGNFERAHEVMQCMVSSFAEIGR 168
                 +L FF +      FR  ++ Y  C    ++S G   R ++  +  ++   ++ +
Sbjct: 79  RLNPTASLGFFQFVSKQQNFRPNVKSY--CKLVHILSRG---RMYDETRAYLNQLVDLCK 133

Query: 169 LKEGFSMVIEM---TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
            K+  +++ +             +  + ++ +  E GL + A  VFD M   G      S
Sbjct: 134 FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRS 193

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
              ++    + G    A      M+  G + D   +++++ AFC  G    + +A   ++
Sbjct: 194 CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG---KVDEAAGFVK 250

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M   G +PN+ T+  LI+G    G  E A +  LK +       NV TYT +I GYCK+
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAA-KGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 346 EKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            KM+ AE +L  M+E+  L+P+   Y  LI G+C+ G  + A  L+D M + G   N++ 
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            N++I+G CK+G + EA  ++ +     L+ D  +Y  LL  + ++  T +A  L  +M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P +  Y TL+   CR     ++ + +   +  G+ P +  Y++++ G  +  N  
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A   ++ +   G     IT+  +ISGLCK  K+ EA + ++ M   G SP  +T  TL 
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 585 YEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
             YCK  +   A  +  +++++     I   N+LI  L   +R+
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 244/561 (43%), Gaps = 43/561 (7%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           ERA+ V+   +  +   G++ +   ++ EM   GL       N ++   C+ G +  AE 
Sbjct: 332 ERAYGVL---IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M    +  D+ SY  ++  YCR G  +EA      ML  G      T   L+   C
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G   +   A ++   M+++G  P+   ++ L+DGL K    E A  L+  ++     K
Sbjct: 449 RVG---AFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
             + T+  MISG CK  KM  AE + ++MK+ G  P+  TY +LI G+CK  N  +A+ +
Sbjct: 506 SRI-TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M +E  +P+I  YN++I GL K  R+ E  +LL +   R L  + +TY  L+    K
Sbjct: 565 KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 624

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE- 508
           +    +A   +  M + GL+ +I   +T+++   R  ++ E+    Q+ +  G FP  E 
Sbjct: 625 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 684

Query: 509 -------------------------------TYTSMICGYLRDGNISSAVKYFQRMNQIG 537
                                           Y   I G  + G +  A ++F  ++  G
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PDN TY  LI G      +DEA +  + M+ +G+ P  VT   L    CK  +   A 
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA- 653
            +   L +K     + T NTLI   C    +  A     K++ +  +   V+ +AL N  
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 654 CYESNKYALFSDLSQRIAEGI 674
           C   +       L+Q I  G+
Sbjct: 865 CKHGDIERSMKLLNQMIKAGV 885



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 7/403 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C++G +  AEE+FD+M   G   D  +Y+ ++  YC+   V +A +   AM
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +R  I  +  +   + +   K  R  + +  +LL EM  +G  PN+ T+  LIDG CK+
Sbjct: 569 -EREPISPSIEMYNSLISGLFKSRR--LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 625

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KAF  + ++   +    N+   + M+SG  +  +++ A +L+++M + G  P+   
Sbjct: 626 GMLDKAFSSYFEMT-ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD--- 681

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +   +    +    ++  D +D   K    PN   YN  I GLCK G+V +A        
Sbjct: 682 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    D  TY  L+  +       +A  L   M++ GL P+I  Y  LI   C+ + + 
Sbjct: 742 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 801

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++ F +    GLFP   TY ++I GY + GN+ +A K   +M + G +P  +TY ALI
Sbjct: 802 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +GLCK   ++ + +    MI  G+    +   TL   Y + G+
Sbjct: 862 NGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 148/283 (52%), Gaps = 9/283 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           MVS    +GR+ E   ++ +M ++G  P     L   +  A     ++   +  DE C  
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA----IQKIADSLDESCKT 708

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            +  +   Y + +   C+ G+V +A R+ S +  +G + DN T   LI  +   G   ++
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG---NV 765

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AF L +EM+R+G  PN+ T+  LI+GLCK    ++A RLF KL +   + PNV TY  
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF-PNVVTYNT 824

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYCK   M+ A  L ++M E+G+ P+  TY++LI G CK G+ ER+  L++ M K G
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
               +  Y  ++ G  + G +Q+ ++L      R L    I++
Sbjct: 885 VDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 230/454 (50%), Gaps = 43/454 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  ++ G  ++   ++ EM   GL +   T N ++      G++  A  + +EM  +G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                ++Y   +   C++GR+++A + LS ML    + D  +   LI  +C     G++ 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR---LGNLM 391

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L +E+      P + T+  L+DGLC++G  E A +L ++++ ++   P++ TYT +
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI-NEGIAPDIVTYTIL 450

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G CK   ++ A+   + M  +GL  ++  Y + I G  K+G+  RA+ L + M  +G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN ++DGLCK G ++EA ELL+                                
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQ-------------------------------- 538

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              +MV  G+ PD   YT++I A     ++++  + F E ++ GL P+  TYT +I G+ 
Sbjct: 539 ---KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A  YF  M + G  P+ ITY +LI+GLCK  ++D+A  F+  M+ KGI P + 
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           +   L  E C  G+   A+    SL K++  R V
Sbjct: 656 SYTILINENCNMGNWQEAL----SLYKQMLDRGV 685



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 259/558 (46%), Gaps = 11/558 (1%)

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           YW +      +  R+  V     +S+   E + +++  ++  +++   +++  S+  +M 
Sbjct: 135 YWVMERVINANMHRIVDVLIGGCVSS---EVSVKILDLLIWVYSKKSMVEQCLSVFDKMI 191

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
            + L       NR++ I  +  L+  A EV+  M   G+     +Y  ++ +YC+ G+V 
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +    LS M  RG   ++ T  +LI     K   G  +QA  L+ EM++ G K + YT+ 
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKK---GEFEQAKGLIGEMLKTGLKVSAYTYN 308

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI G   KG   +A  L  ++V      P V TY + I G CK  +M+ A   L  M  
Sbjct: 309 PLIYGYFNKGMLAEALSLQEEMVLK-GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLA 367

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             LLP+  +Y +LIYG+C++GN  +A+ L D +      P I  YN ++DGLC++G ++ 
Sbjct: 368 NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +     +  D +TYTIL++   K      A   F  M+  GL  D +AY T I 
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              +      +    +E +  G  P    Y  ++ G  + GN+  A +  Q+M   G  P
Sbjct: 488 GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D +TY ++I    +  +L +  + +  M+ KG++P  VT   L + +  +G    A I  
Sbjct: 548 DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYF 607

Query: 601 ESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE 656
             + +K  +  V   N+LI  LC  +R+  A  FF +++ K    ++ S   L N  C  
Sbjct: 608 SEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667

Query: 657 SNKYALFSDLSQRIAEGI 674
            N     S   Q +  G+
Sbjct: 668 GNWQEALSLYKQMLDRGV 685



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 196/439 (44%), Gaps = 11/439 (2%)

Query: 228 LMVVAYCRMGRVTEAD-RWLSAMLDRGAILDNAT---LTLLITAFCDKGFRGSIKQAFEL 283
           LM  AY  M RV  A+   +  +L  G +    +   L LLI  +  K     ++Q   +
Sbjct: 130 LMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSM---VEQCLSV 186

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            ++M++    P+V     ++  L  K    KA  ++ + +     KP + TY  ++  YC
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLLDSYC 245

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K  K+ +   LL  M+ +G  PN  TY  LI G  K G FE+A  L+  M K G   + Y
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN +I G   KG + EA  L ++   +       TY   +    K      A+     M
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +   L PD+ +Y TLI  +CR   + ++   F E  +  LFPT  TY +++ G  R G +
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A +    M   G APD +TY  L++G CK   L  A +F++ M+ +G+        T 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 584 AYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
                K GD++ A  + E +  K +   +   N ++  LC    +  A+    K++    
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545

Query: 641 NVDRVSLAALKNACYESNK 659
             D V+  ++ +A  E+ +
Sbjct: 546 IPDYVTYTSIIHAHLENGR 564



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 7/205 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +V    ++G L+E   ++ +M ++G+     T   ++    E G +    E+F EM
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ++G+     +Y +++  +   GR+  A  + S M ++G + +  T   LI   C     
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV--- 632

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + QA+    EMV KG  PN Y++T+LI+  C  G  ++A  L+ +++     +P+  T
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML-DRGVQPDSCT 691

Query: 335 YTAMISGY---CKEEKMNRAEMLLE 356
           ++A++      CK + + + E LL+
Sbjct: 692 HSALLKQLGKDCKLQAVRQLESLLD 716


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 221/481 (45%), Gaps = 36/481 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V Q ++ + ++  ++ E   ++ EM   G      T N V+   C++  +  A ++ D M
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWL---------------------------- 246
             RG   D  +Y  ++   CR+G++ EA + L                            
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQ 374

Query: 247 ----SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                 M++ G   D  T  +L+   C +G   S+  A +L+ EM R+G +PNV T+ +L
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEG---SLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ++GLCK G  E+A  L L  + +     N   Y  +I   C++EK++ A  LL  M  +G
Sbjct: 432 VNGLCKAGLLEEA-GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY SLIYG CKV   + A+ L   M  +G   N   YN +I  L ++G  Q+A 
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L+     R    DKITY  L+    K    ++ L L+ +M+  GL  D  +   +I   
Sbjct: 551 TLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGL 610

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+  K+  + +F ++AI  G  P   TY S++ G  + G I  A+  F R+   G  PD 
Sbjct: 611 CKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY   IS  CK+  +++AC F+   I  G  P  +T   L Y   KQ +      +L+ 
Sbjct: 671 FTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDE 730

Query: 603 L 603
           L
Sbjct: 731 L 731



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 201/466 (43%), Gaps = 39/466 (8%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A  VF +M ++GV     ++ +++ A C    V  A   L  M   G + ++     L
Sbjct: 200 QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTL 259

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I A   K     + +A +LLEEM   G  P+V T   +I GLCK      A +L  +++ 
Sbjct: 260 IHALSQK---NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLL 316

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLL----------------------------- 355
              Y P+  TY  ++ G C+  K+N A  +L                             
Sbjct: 317 RGFY-PDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQS 375

Query: 356 ---ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
              E M   G  P+  TY  L++G CK G+   A DL++ M + GC PN+  Y  +++GL
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK G ++EA  +L +   R L  + + Y  L+    ++ +   AL L   M   G  PD+
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y +LI   C+  ++ E+ + F   +  G      TY ++I   LR G    A+     
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC  D ITY  LI   CK   +++  + YE MI  G+    ++   +    CK G 
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 593 SATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
              A   L     + +   I T N+++  LC   R+  A   F +L
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 205/452 (45%), Gaps = 16/452 (3%)

Query: 209 EVFDEMCA-RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E+F+ +   +G C     Y + +     +G+    D+ L  M + G +   +   +++  
Sbjct: 97  EIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKH 156

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
           +   G  G   QA  LL +M R  +  +P   ++ ++++ L      + A  +F  ++ S
Sbjct: 157 Y---GKAGQPGQAIRLLLDM-RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDML-S 211

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               P V T+  ++   C   +++ A  LL  M + G +PN+  Y +LI+   +      
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L++ M   GC P++  +N +I GLCK  ++ +A +L+ +   R    D +TY  LL 
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLF 504
              +  +  +A  +  ++      P+     TLI  +    ++KE++ F  E  I  G  
Sbjct: 332 GLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY  ++ G  ++G++S A      M++ GC P+ ITY  L++GLCK   L+EA   
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCS 621
              M  +G++   V    L    C++     A+ +L  +  K     + T N+LI  LC 
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             R+  A   FH +L      + V+   L +A
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFD 212
           E    +++S   +G+++E   +++ M   G +P + S    + G  C +G ++   ++  
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY-CHVGELQKVVQLVK 169

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  +G+  +  +Y  +++  C+ G+V E ++ L  M+ RG   D+   T LI  FC   
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCK-- 227

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G+ + A++L  EM  +   P+    + LI GL   G   +A +LF ++++   ++P+ 
Sbjct: 228 -LGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK-GFEPDE 285

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TYTA+I GYCK  +M +A  L  +M + GL PN  TYT+L  G CK G  + A +L+  
Sbjct: 286 VTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G   NI  YN I++GLCK G + +A +L+++  +  L  D ITYT L+  + K  E
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  L   M+  GL P +  +  L+   C   K+++ E+  +  +  G+ P   TY S
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++  Y    N+  + + ++ M   G  PD+ TY  LI G CK   + EA   ++ M+ K
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 524



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 247/520 (47%), Gaps = 43/520 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN-RVVGIACELGLVEYAEEVFDE 213
           V         E G L E      ++ N G+ L   + N  +  ++ +  ++    +VF E
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
               GVC +  SY +++ +  R+G++ EA   L  M  +G I D  + T +I  +C    
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH--- 157

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTH---------------------------------- 299
            G +++  +L++EM  KG KPN+YT+                                  
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 300 -TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            T LIDG CK G T+ A++LF ++  +    P+   ++A+I G     K+  A+ L   M
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEM-EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            ++G  P+  TYT+LI G+CK+G  ++A+ L + M + G TPN+  Y A+ DGLCK G +
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A ELL +  ++ LQ +  TY  +++   K     QA+ L   M +AGL+PD   YTTL
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           + A+ +  +M ++ +  +E +  GL PT  T+  ++ G    G +    +  + M + G 
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+  TY +++   C ++ +  + + Y  M  +G+ P   T   L   +CK  +   A  
Sbjct: 457 MPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWF 516

Query: 599 ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + + + +K   L   + N LI+     K++  A   F ++
Sbjct: 517 LHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 203/405 (50%), Gaps = 4/405 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ EG  ++ EM   G+         ++   C+LG  + A ++F EM AR +  D+ ++
Sbjct: 194 GKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAF 253

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++      G+V EAD+  + M+ +G   D  T T LI  +C     G +K+AF L  +
Sbjct: 254 SALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK---LGEMKKAFFLHNQ 310

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+ G  PNV T+T L DGLCK G  + A  L  ++ R    + N+ TY  +++G CK  
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK-GLQLNISTYNTIVNGLCKAG 369

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + +A  L+E MKE GL P+T TYT+L+  + K G   +A +L+  M   G  P +  +N
Sbjct: 370 NILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFN 429

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++GLC  G++++   LLK   ++ +  +  TY  ++ ++  +   + +  ++  M   
Sbjct: 430 VLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQ 489

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD + Y  LI   C+ + MKE+    +E +      T  +Y ++I G+ +   +  A
Sbjct: 490 GVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEA 549

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            + F+ M + G       Y   +    ++  ++   +  +  I K
Sbjct: 550 RQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 9/376 (2%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           K W  + +   V    L + G   +A + F KL+   NY   +   +  +   C   K +
Sbjct: 33  KDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLL---NYGVALSAGSCNLYLTCLSSKRD 89

Query: 350 RAEMLLERMKE---QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
              M+L+   E    G+  NT +Y  L+    ++G    A+ L+  M  +GC P++ +Y 
Sbjct: 90  MLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYT 149

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            IIDG C  G +Q+  +L+K+   + L+ +  TY+ ++    K  +  +   +   M+K 
Sbjct: 150 TIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKR 209

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD   YTTLI  FC+    + + K F E     + P    ++++ICG    G +  A
Sbjct: 210 GVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEA 269

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            K F  M + G  PD +TY ALI G CK  ++ +A   +  M+  G++P  VT   LA  
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329

Query: 587 YCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            CK G+  TA  +L  + +K   L I T NT++  LC    +  A     ++     + D
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389

Query: 644 RVSLAALKNACYESNK 659
            ++   L +A Y++ +
Sbjct: 390 TITYTTLMDAYYKTGE 405



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 156/319 (48%), Gaps = 5/319 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
             +I  G FE        ++  + ++G +K+ F +  +M   GL     T   +    C+
Sbjct: 274 NEMIKKG-FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G ++ A E+  EMC +G+  + S+Y  +V   C+ G + +A + +  M + G   D  T
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            T L+ A+      G + +A ELL EM+ +G +P V T  VL++GLC  G  E   RL L
Sbjct: 393 YTTLMDAYYKT---GEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL-L 448

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           K +      PN  TY +++  YC    M  +  +   M  QG++P++NTY  LI GHCK 
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
            N + A+ L   M ++       +YNA+I G  K+ ++ EA +L ++  +  L A    Y
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568

Query: 441 TILLSEHLKQAETKQALGL 459
            + +  + ++   +  L L
Sbjct: 569 NLFVDMNYEEGNMETTLEL 587


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 210/406 (51%), Gaps = 4/406 (0%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M N  + +   +L  V+   C+ G VE   ++ DE+ A+GV A+  +Y   +  Y +   
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +      L+ M   G   +  T TLLI  F + G    I++A  L EEM  KG + +VY 
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIG---KIEEAQRLFEEMREKGIEADVYV 336

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +T +I   C+ G  ++A  LF ++       P+ HTY A+I G CK  +M  A+ML+  M
Sbjct: 337 YTSIISCNCRSGNVKRALVLFDEMT-DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           + +G+  N   + +LI G+C+ G  + A  L  +M K+G   +++AYN+I  GLCK  R 
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA  LL    +R +  + +++T L+  + K+    +A  +F  M + G  P+I  Y  L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  + ++  MKE+ K   E    GL P   T TS+I G   DG +  A+K F  M Q G 
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            P+ +TY A+ISGL K  + +EA + Y+ M   G++P +    +L 
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 205/412 (49%), Gaps = 12/412 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E F+ M  +G   D  S  + ++A  R G+V    R+   M++    +   +LT+++ 
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 237

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK----GWTEKAFRLFLKL 322
             C    RG ++   +L++E+  KG K NV T+   I+G  K+    G  E      L L
Sbjct: 238 GLCK---RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-----ILTL 289

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +  +    NV TYT +I G+    K+  A+ L E M+E+G+  +   YTS+I  +C+ GN
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            +RA  L D M  +G  P+ + Y A+I G+CK G+++ A  L+ +   + +  + + +  
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + +     +AL L   M K GL  D+ AY ++ +  C+  +  E++      +  G
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   ++T++I  Y ++GN   A + F+ M + G  P+ ITY  LI G  K+  + EA 
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           +  + +  +G+ P   T  +L +  C  G    A+ + + + ++  +  V T
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+   M   GV  +  +Y L++  +  +G++ EA R    M ++G   D    T +I+  
Sbjct: 285 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G   ++K+A  L +EM  KG  P+ +T+  LI G+CK G  E A ++ +  ++    
Sbjct: 345 CRSG---NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA-QMLVNEMQGKGI 400

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             N   +  +I GYC+   ++ A  L   M+++GL  +   Y S+  G CK+   + A  
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 460

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M + G +PN  ++  +ID  CK+G   EA  + ++  ++    + ITY +L+  + 
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 520

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+   K+A  L   +   GL PD++  T+LI   C   K+  + K F E    GL P   
Sbjct: 521 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           TYT+MI G  +DG    A K +  M + G  PD+  Y +L+  L
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 7/357 (1%)

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           LL   + D    G   +A E  E M +KG+  +  +  V +  L + G  +   R F ++
Sbjct: 164 LLFRVYADNKMFG---EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRM 220

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V  D  +  V++ T ++ G CK   +     L++ +  +G+  N  TY + I G+ K  +
Sbjct: 221 VNLD-VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
                +++ LM KEG   N+  Y  +I G    G+++EA  L ++  ++ ++AD   YT 
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 339

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++S + +    K+AL LF  M   GL P  H Y  LI   C+  +M+ ++    E    G
Sbjct: 340 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           +      + ++I GY   G +  A++    M + G   D   Y ++ SGLCK ++ DEA 
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
               SM+ +G+SP  ++  TL   YCK+G+   A  +   +++K     I T N LI
Sbjct: 460 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 516



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 5/300 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +K    +  EMT+ GL     T   ++   C+ G +E A+ + +EM  +G+  +   +
Sbjct: 348 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 407

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC  G V EA R    M  +G   D      + +  C    +   K    LL  
Sbjct: 408 NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG---LLFS 464

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +G  PN  + T LID  CK+G   +A R+F ++    N  PN+ TY  +I GY K  
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV-PNIITYNVLIDGYSKRG 523

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M  A  L + ++ +GL+P+  T TSLI+G C  G  + A  L D M + G  PN+  Y 
Sbjct: 524 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 583

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           A+I GL K GR +EA++L  +  +  L  D   Y+ L+   L  A+   ++ +    VKA
Sbjct: 584 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS-LHSADESISMQIQGSQVKA 642



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 137/254 (53%), Gaps = 4/254 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+++    +V EM   G+ L     N ++   CE G+V+ A  +   M  +G
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + +D  +Y  +    C++ R  EA   L +M++RG   +  + T LI  +C +G     K
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 494

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F  +EE   KG  PN+ T+ VLIDG  K+G  ++A +L  +L  +    P+V+T T++
Sbjct: 495 RVFREMEE---KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL-ENRGLIPDVYTCTSL 550

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C + K++ A  L + M ++GL+PN  TYT++I G  K G  E A+ L D M + G 
Sbjct: 551 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610

Query: 399 TPNIYAYNAIIDGL 412
           TP+   Y++++  L
Sbjct: 611 TPDDTVYSSLVGSL 624



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 31/355 (8%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYC---KEEKMNRAEMLLE-------RMKEQGLLPNTN 368
           F   +R + YKP++  Y  +I       K +K+++++   E          + GL     
Sbjct: 78  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 137

Query: 369 TYTSLIYGHCKVGNFERAY---DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
              SL+   C      RA       DL+ +      +YA N +       G   EA+E +
Sbjct: 138 VIASLVDDACNESKCNRAKFKEKFFDLLFR------VYADNKMF------GEALEAFEHM 185

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +K   +    D+ +  + L    +  +    L  F RMV   +   +++ T ++   C++
Sbjct: 186 EK---KGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKR 242

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             ++   K   E    G+     TY + I GY +  ++    +    M + G A + +TY
Sbjct: 243 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 302

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             LI G     K++EA + +E M  KGI        ++    C+ G+   A+++ + +  
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 362

Query: 606 KLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           K  I + +T   LI  +C   ++  A +  +++ GK  +++ V    L +   ES
Sbjct: 363 KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 417


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 173/641 (26%), Positives = 294/641 (45%), Gaps = 49/641 (7%)

Query: 67  SMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT----VVASLANEAGSMVALSFFYW 122
            MVL+   + F   SSP      I +D L+    +T       S+     S   +++   
Sbjct: 196 GMVLQLLAESF---SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDAL 252

Query: 123 AIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN 182
             G  K     +L I  A  L+ + N +        ++    +  RL+E   ++      
Sbjct: 253 IDGLCKAG---KLDI--ALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL-----K 302

Query: 183 GLPLITSTL--NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
            +P + + +  N ++   C+   V+ A E+FD M   G  AD  +Y +++   C++ R+ 
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362

Query: 241 EADRWLSAML-DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYT 298
           EA R +  M    G   +  T + LI   C+ G    + QA+E+ E MV  +G  PN +T
Sbjct: 363 EAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG---RVNQAWEVYERMVAVEGISPNRFT 419

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLV----RSDNY----------------KPNVHTYTAM 338
           +  L++GLCK G + +  + F +++    RS +                 +P + TY  +
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTL 479

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G  K   +  A  LLE M E GL P+  T+ S++ G CK      A+++     + GC
Sbjct: 480 VTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 539

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y+ +IDGL K  ++ EA +LL K  +   +A+ +TY+ ++   LK    + A+ 
Sbjct: 540 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M  AG  PD   Y TLI  F ++++++E+    +E + AG  P+  TYT++  G  
Sbjct: 600 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI-GKGISPCE 577
           R G    AV+    M   GCAP+ ITY +++ GLCK  ++ EA  ++E M   + ++P  
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHK 634
           +    L    CK G    A   LE + +   I  V T   LI  LC   R+      F  
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 635 LLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           +  +    D  +  A+ NA C +    A ++ L +    GI
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGI 820



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 222/471 (47%), Gaps = 17/471 (3%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++   +++ ++ E   ++ +M   G    T T + VV    ++G +E A  V  +M   G
Sbjct: 549  LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               DA +Y  ++  + +  R+ EA   L  ML+ G      T T L    C  G      
Sbjct: 609  CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG---RFD 665

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +A E+L+ M  +G  PN  T++ ++DGLCK G   +A   F K+ R +   P+V  Y+A+
Sbjct: 666  EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G CK  +++ A   LERM   G +P+  T++ LI G C  G  +   +L   M + GC
Sbjct: 726  IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGC 785

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              +IYAYNA+I+  C KG    AY LL++     +  + +T+ I++          +A+ 
Sbjct: 786  KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVS 845

Query: 459  LF------CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             F      CR        D  +Y TLI +    ++ +++ +  +  +  G  P    Y +
Sbjct: 846  YFHSIPEDCR--------DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897

Query: 513  MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            ++ G  + G+   A K  Q M   G +PD  TY  +ISGL K  +L  AC ++E M+ K 
Sbjct: 898  VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957

Query: 573  ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            + P  +   +L   +CK      A  +L S   +  I   +T++  LC  +
Sbjct: 958  LKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNR 1008



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/642 (23%), Positives = 266/642 (41%), Gaps = 77/642 (11%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
           TV+     E G +    FF+  +    F      Y      L   G  E A  V+Q +  
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAE 204

Query: 162 SF---------------AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           SF               ++ G L   +     M   G+   T T + ++   C+ G ++ 
Sbjct: 205 SFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDI 264

Query: 207 A-----------------------------EEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           A                             EE    + A     +   +  ++   C+  
Sbjct: 265 ALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQAR 324

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNV 296
           RV EA      M + G   D  T  +L+   C    R  I +A+  +E M R +G  PNV
Sbjct: 325 RVDEAFELFDVMKESGCSADVITYNILLKGLCK--LR-RIPEAYRHVELMRRTEGCSPNV 381

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T + LI GLC  G   +A+ ++ ++V  +   PN  TY  ++ G CK     R E   E
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441

Query: 357 RMKE---------------------QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           +M E                     Q   P   TY +L+ G  K G    A  L++ M +
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIE 501

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G +P++  +N+++DGLCK+ R+ +A+ + K+A +R  + + +TY+ L+    K A+  +
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 561

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L  +MV+ G   +   Y+T++    +  +M+++    ++   AG  P   TY ++I 
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+ +   +  AV   + M + G  P  +TY  L  GLC+  + DEA +  + M  +G +P
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALF 631
             +T  ++    CK G    A+   E + +   +       + LI  LC   R+  A  F
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
             +++   +  D V+ + L N   ++ +      LF  +++R
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 219/452 (48%), Gaps = 12/452 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GR+ + F+   +    G      T + V+   C    V+   ++ +EM  RG
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +Y  +V A    GR  EA   L  M   G   +  T  L+I   C +   G I+
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE---GEIE 123

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF +++EMV +G+ P+V  HTVL+  LC+ G  ++A+  F + V    + P+  TY  M
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAW-FFFQQVLLIGFTPDAVTYNTM 182

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G  K  ++  A M+L+ + E    P   T+T  + G  K GN   AY+  D M + G 
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN   Y+A+IDGLCK G++  A  LL+    +  QA    ++ LL    +    ++A+ 
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M      P++  + +L+   C+ +++ E+ + F     +G      TY  ++ G  
Sbjct: 300 LLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 519 RDGNISSAVKYFQRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIG-KGISPC 576
           +   I  A ++ + M +  GC+P+ +T+  LI GLC   ++++A + YE M+  +GISP 
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
             T   L    CK GDS       E + ++ W
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREW 448



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 243/564 (43%), Gaps = 86/564 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++    GR KE FS++  M  NG P    T   ++   C+ G +E A  V DEM  RG
Sbjct: 77  LVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRG 136

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT------------------ 260
              D   + +++ A C +GRV EA  +   +L  G   D  T                  
Sbjct: 137 FVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAG 196

Query: 261 --LTLLITAFCDKGF------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             L LL  +F                  G++  A+E  + M + G  PN  T+  LIDGL
Sbjct: 197 MVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGL 256

Query: 307 CKKGWTEKAFRLF----------------------------LKLVRSDNYKPNVHTYTAM 338
           CK G  + A  L                             ++L+++    PNV  + ++
Sbjct: 257 CKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSL 316

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK-EG 397
           ++G C+  +++ A  L + MKE G   +  TY  L+ G CK+     AY  ++LM + EG
Sbjct: 317 MNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG 376

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETKQA 456
           C+PN+  ++ +I GLC  GRV +A+E+ ++    E +  ++ TY  LL    K  ++++ 
Sbjct: 377 CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRL 436

Query: 457 LGLFCRMVKAGL---------------------NPDIHAYTTLIAAFCRQKKMKESEKFF 495
              F +M++                         P +  Y TL+    +   ++++    
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           +  I +GL P   T+ S++ G  ++  I  A   F+R  + GC P+ +TY  LI GL K 
Sbjct: 497 EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TV 612
           +K+DEA Q    M+  G     VT  T+     K G    A+++L  +     +    T 
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 613 NTLIRKLCSEKRVGMAALFFHKLL 636
           NTLI      +R+  A     ++L
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREML 640



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 201/444 (45%), Gaps = 41/444 (9%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++  F +  RL+E   ++ EM   G      T   +    C  G  + A E+ D M ARG
Sbjct: 619  LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSI 277
               +A +Y  +V   C+ GRVTEA  +   M     +  +    + LI   C  G    I
Sbjct: 679  CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG---RI 735

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             +A+E LE M+R G  P+V T ++LI+GLC  G  +    LF  +      K +++ Y A
Sbjct: 736  DEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER-GCKADIYAYNA 794

Query: 338  MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC-------KVGNF------- 383
            MI+ YC + + + A  LLE MK  G+  NT T+  +I   C        V  F       
Sbjct: 795  MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854

Query: 384  -------------------ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
                               E+A +L+  M  +G +P+   Y  ++DGL K G  + A +L
Sbjct: 855  RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914

Query: 425  LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            L++   R    D  TYTI++S   K  +   A   F  M++  L PD   Y++LI AFC+
Sbjct: 915  LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974

Query: 485  QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              K+ ++ K  +   ++G+ PT   Y++M+    ++     A++  + M    C P    
Sbjct: 975  ADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031

Query: 545  YGALISGLCKQSKLDEACQFYESM 568
            + +L +    + ++DEA +    +
Sbjct: 1032 WTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 164/335 (48%), Gaps = 4/335 (1%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+ VLI+GLCK G    AF  F K ++   ++P V TY+ +I G C++ ++++   LLE 
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQF-GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G  PN  TY +L+      G  + A+ L++ M   GC P +  +  II GLCK+G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++ A+ ++ +   R    D   +T+LL    +     +A   F +++  G  PD   Y T
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++    +  +++ +    Q    +   PT  T+T  + G  + GN++ A ++F  M Q G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            +P+ +TY ALI GLCK  KLD A         K          +L +  C+      A+
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAI 298

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
            +L+++     +   N+L+  LC  +RV  A   F
Sbjct: 299 QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELF 333



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 210/475 (44%), Gaps = 58/475 (12%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           + +G  ++ EM   G      T N +V      G  + A  + + M A G   +  ++ L
Sbjct: 52  VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGL 111

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C+ G +  A R +  M+DRG + D    T+L+ A C+    G + +A+   ++++
Sbjct: 112 IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCE---LGRVDEAWFFFQQVL 168

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G+ P+  T+  ++DGL K G  E A  + L+L+      P V T+T  + G  K   +
Sbjct: 169 LIGFTPDAVTYNTMVDGLYKAGRLEAA-GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNL 227

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM------------------ 390
             A    + M + G+ PNT TY +LI G CK G  + A  L+                  
Sbjct: 228 TGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHG 287

Query: 391 -----------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                       L+    C PN+  +N++++GLC+  RV EA+EL     +    AD IT
Sbjct: 288 LCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVIT 347

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           Y ILL    K     +A      M +  G +P++  ++TLI   C   ++ ++ + ++  
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407

Query: 499 ITA-GLFPTKETYTSMICGYLRDGNISSAVKYFQR----------------------MNQ 535
           +   G+ P + TY  ++ G  + G+     + F++                      M Q
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + C P  +TY  L++GL K   + +A    E MI  G+SP  +T  ++    CK+
Sbjct: 468 V-CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKE 521



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 3/201 (1%)

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  LI   C+  ++ ++   F++AI  G  PT  TY+++I G  RD  +    K  + M 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GCAP+ +TY  L++ L  Q +  EA    E M   G  P  +T   +    CK+G+  
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 595 TAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            A  +++ +  + ++  V     L+  LC   RV  A  FF ++L      D V+   + 
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183

Query: 652 NACYESNKYALFSDLSQRIAE 672
           +  Y++ +      + Q +AE
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAE 204


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 240/513 (46%), Gaps = 36/513 (7%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F         ++  F + G++ +  S+  +M ++GL    ST+N ++   CE+G +  
Sbjct: 26  GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 85

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A ++F EM A      ++S+ +++  +   GRV +A   L  M    + +   T  L++ 
Sbjct: 86  ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145

Query: 267 AFC-DKGFRGSIKQAFELLEEMVRKGWKPN------------------------------ 295
             C +      ++QA E  +EM   G +P+                              
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS 205

Query: 296 --VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
             + T+ VL+DG CK G T +A  L  +++++  Y+PNV TY+ +I+ YCK +K+  A  
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA-GYEPNVFTYSIIINCYCKLDKVEEAWE 264

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +  +M E   +PN  T+ +LI G CK G  E A  L   M K GC   I  YN +ID LC
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324

Query: 414 KK-GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           KK G V  A +L  K     L    +TY  L+          +A+  F  M +    P++
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNV 383

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y+ LI   C+ ++MKE+ K  ++    G  PT  TY  +I G+ + G + SA+ +F++
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GCAP+ + +  LI GLCK  + ++  +    M  +G  P  +T   L    C    
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503

Query: 593 SATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
              A  + + +     + T N LIR LC++K+V
Sbjct: 504 VEDAQRLFDGMACAPNVTTFNFLIRGLCAQKKV 536



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 203/444 (45%), Gaps = 53/444 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC----ELGLVEYAEEVFDEM 214
           ++  F   GR+++  + + +M  +   + T T N V+   C        +E A E F EM
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM 167

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A GV  D  SY +++ A    GR+ EA    SAM     I+   T  +L+  +C  G  
Sbjct: 168 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIM---TYNVLMDGYCKIG-- 222

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
               +A  L++E+++ G++PNV+T++++I+  CK    E+A+ +F+K++ S N  PN  T
Sbjct: 223 -QTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES-NCVPNAVT 280

Query: 335 YTAMISGYCKEEKMNRA-----EM-------------------------------LLERM 358
           +  +I+G+CK   +  A     EM                               L  ++
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIYAYNAIIDGLCKKGR 417
           +  GL P   TY SLI G C       A    D M  EG C PN+  Y+ +IDGLCK  R
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRR 398

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++EA + L+           +TY  L++   K  E K AL  F +M  AG  P+   + T
Sbjct: 399 MKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNT 458

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+ ++  +  +        G  P   TY  +I G      +  A + F  M    
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---A 515

Query: 538 CAPDNITYGALISGLCKQSKLDEA 561
           CAP+  T+  LI GLC Q K++EA
Sbjct: 516 CAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE-LGLVEYAEEVFDEMCAR 217
           +++ F + G L++   +  EM   G      T N ++   C+  G V  A ++F+++   
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     +Y  ++  +C   R++EA ++   M  + A  +  T ++LI   C K  R  +
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSILIDGLC-KVRR--M 399

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K+A + LE+M   G+ P V T+  LI+G CK G  + A  LF + ++     PN   +  
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSAL-LFFEKMKLAGCAPNTVIFNT 458

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK E+ N    LL  M  +G  P+  TY  LI G C     E A  L D M    
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA--- 515

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           C PN+  +N +I GLC + +V+EA  +L
Sbjct: 516 CAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 148/351 (42%), Gaps = 58/351 (16%)

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A++SG     K ++A  L + +      PN +TY  LI G CK G   +A  +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI----------------- 438
            G  PN    N ++ GLC+ G++  A +L      RE+QA                    
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLF-----REMQAGPFLPTSASHNILLRGFFMA 115

Query: 439 -----------------------TYTILLS----EHLKQAETKQALGLFCRMVKAGLNPD 471
                                  TY ++L     E+      +QA+  F  M  +G+ PD
Sbjct: 116 GRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPD 175

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           + +Y  L++A     +M E+   F  A+T    P   TY  ++ GY + G    A    +
Sbjct: 176 LESYHILLSALSDSGRMAEAHALFS-AMTCS--PDIMTYNVLMDGYCKIGQTYEAQSLMK 232

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            + + G  P+  TY  +I+  CK  K++EA + +  MI     P  VT  TL   +CK G
Sbjct: 233 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 292

Query: 592 DSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGM--AALFFHKLLG 637
               A+ +   ++K   K  I T NTLI  LC +KR G+  A   F+KL G
Sbjct: 293 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC-KKRGGVYTAVDLFNKLEG 342



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 10/210 (4%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA-DASSYKLMVVAYCRMGRVTE 241
           GL     T N ++   C+   +  A + FDEM   G CA +  +Y +++   C++ R+ E
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKE 401

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A + L  M   G      T   LI  FC  G    +K A    E+M   G  PN      
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCG---ELKSALLFFEKMKLAGCAPNTVIFNT 458

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           LIDGLCK        RL   +  ++  KP+V TY  +ISG C   ++  A+ L + M   
Sbjct: 459 LIDGLCKAERANDGLRLLCHM-HAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM--- 514

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              PN  T+  LI G C     E A +++D
Sbjct: 515 ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 8/198 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +  RL E      EM     P + +    + G+ C++  ++ A +  ++M A G
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGL-CKVRRMKEAAKTLEDMKAHG 413

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++  +C+ G +  A  +   M   G   +      LI   C K  R +  
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC-KAERAN-- 470

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               LL  M  +G KP+V T+  LI GLC     E A RLF  +  +    PNV T+  +
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA----PNVTTFNFL 526

Query: 339 ISGYCKEEKMNRAEMLLE 356
           I G C ++K+  A  +L+
Sbjct: 527 IRGLCAQKKVEEARNILD 544


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  ++ +M    V  D  +  +++  +C  G+V  A   +S +L  G   +  TL  L+ 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C     G +K+A    ++++ +G++ +  ++ +LI+G+CK G T  A RL  ++ R  
Sbjct: 137 GLC---LEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERW- 192

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           + +PNV  Y+ +I   CK+  ++ A  L   M  +G+ P+  TY+ L+ G C VG   RA
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            DL++ M  E   P+IY Y  ++D LCK+G+V+EA  +L    +  +  D + Y+ L+  
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +    E   A  +F  M + G+ PD+H Y+ +I   C+ K++ E+   F+E     + P 
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TYTS+I    + G IS     F  M   G  PD ITY  LI  LCK   LD A   + 
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
            M  + I P   T   L    CK G    A+   + L  K   L +RT   +I  LC E
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKE 491



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 221/459 (48%), Gaps = 39/459 (8%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           E  +  +  +++ F   G++   FS V ++   G    T TLN ++   C  G V+ A  
Sbjct: 90  EPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALR 149

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-------DRW----------------- 245
             D++ A+G      SY +++   C++G    A       +RW                 
Sbjct: 150 FHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC 209

Query: 246 -----------LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
                       + M+ +G   D  T ++L++ FC     G + +A +LL EMV +   P
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFC---IVGQLNRAIDLLNEMVLENINP 266

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++YT+T+L+D LCK+G  ++A  +   +V++     +V  Y+ ++ GYC   ++N A+ +
Sbjct: 267 DIYTYTILVDALCKEGKVKEAENVLAVMVKA-CVNLDVVVYSTLMDGYCLVNEVNNAKRV 325

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              M + G+ P+ + Y+ +I G CK+   + A +L + + ++   P+   Y ++ID LCK
Sbjct: 326 FYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCK 385

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            GR+   ++L  +   R    D ITY  L+    K     +A+ LF +M    + P+++ 
Sbjct: 386 SGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYT 445

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +T L+   C+  ++K + +FFQ+ +T G      TYT MI G  ++G +  A+    RM 
Sbjct: 446 FTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
             GC  D +T+  +I     + + D+A +    MI +G+
Sbjct: 506 DNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 204/438 (46%), Gaps = 6/438 (1%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           S   + R     S+  +M  + +     TLN ++   C  G V  A     ++   G   
Sbjct: 67  SLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQP 126

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +  +   ++   C  G+V EA R+   +L +G  L   +  +LI   C  G     + A 
Sbjct: 127 NTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG---ETRAAI 183

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            LL  + R   +PNV  ++++ID LCK    ++A+ L+ ++V      P+V TY+ ++SG
Sbjct: 184 RLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV-GKGISPDVVTYSILVSG 242

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           +C   ++NRA  LL  M  + + P+  TYT L+   CK G  + A +++ +M K     +
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLD 302

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  Y+ ++DG C    V  A  +     Q  +  D   Y+I+++   K     +AL LF 
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            + +  + PD   YT+LI   C+  ++      F E +  G  P   TY ++I    ++G
Sbjct: 363 EIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNG 422

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           ++  A+  F +M      P+  T+  L+ GLCK  +L  A +F++ ++ KG      T  
Sbjct: 423 HLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482

Query: 582 TLAYEYCKQG--DSATAM 597
            +    CK+G  D A A+
Sbjct: 483 VMINGLCKEGLLDEALAL 500



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L ++M     +P+ +T  ++I+  C  G    AF    K+++   Y+PN  T   ++
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKL-GYQPNTITLNTLM 135

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A    +++  QG   +  +Y  LI G CK+G    A  L+  + +    
Sbjct: 136 KGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIR 195

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  Y+ IID LCK   V EAY+L  +   + +  D +TY+IL+S      +  +A+ L
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              MV   +NPDI+ YT L+ A C++ K+KE+E      + A +      Y++++ GY  
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +++A + F  M Q+G  PD   Y  +I+GLCK  ++DEA   +E +  K + P  VT
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375

Query: 580 RVTLAYEYCKQGDSATAMIIL-ESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +L    CK G  +    +  E LD+     + T N LI  LC    +  A   F+K+ 
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM- 434

Query: 637 GKDQNV 642
            KDQ +
Sbjct: 435 -KDQAI 439



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 5/342 (1%)

Query: 330 PNVHTY--TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           P  HT+    ++      ++   A  L ++M+   + P+  T   +I   C  G    A+
Sbjct: 54  PTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAF 113

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
             +  + K G  PN    N ++ GLC +G+V+EA     K   +  +   I+Y IL++  
Sbjct: 114 SGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGV 173

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  ET+ A+ L  R+ +  + P++  Y+ +I   C+   + E+   + E +  G+ P  
Sbjct: 174 CKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDV 233

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ ++ G+   G ++ A+     M      PD  TY  L+  LCK+ K+ EA      
Sbjct: 234 VTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKR 624
           M+   ++   V   TL   YC   +   A  +  ++ +      V+    +I  LC  KR
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           V  A   F ++  K+   D V+  +L +   +S + +   DL
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   +I R+ E  ++  E+    +   T T   ++   C+ G + Y  ++FDEM  RG
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++ A C+ G +  A    + M D+    +  T T+L+   C  G    +K
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG---RLK 460

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E  ++++ KG+  NV T+TV+I+GLCK+G  ++A  L  ++   +    +  T+  M
Sbjct: 461 NALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRM-EDNGCISDAVTFEIM 519

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I  +  +++ ++AE L+  M  +GLL
Sbjct: 520 IRAFFDKDENDKAEKLVREMIARGLL 545



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 90/201 (44%), Gaps = 7/201 (3%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F  M      P    +  ++ +    K+   +   +++   + + P   T   +I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G +  A     ++ ++G  P+ IT   L+ GLC + K+ EA +F++ ++ +G  
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-----IRTVNTLIRKLCSEKRVGMAA 629
              ++   L    CK G++  A+ +L  +++  W     +   + +I +LC +  V  A 
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIER--WSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
             + +++GK  + D V+ + L
Sbjct: 219 DLYTEMVGKGISPDVVTYSIL 239


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 210/406 (51%), Gaps = 4/406 (0%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M N  + +   +L  V+   C+ G VE   ++ DE+ A+GV A+  +Y   +  Y +   
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +      L+ M   G   +  T TLLI  F + G    I++A  L EEM  KG + +VY 
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIG---KIEEAQRLFEEMREKGIEADVYV 332

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +T +I   C+ G  ++A  LF ++       P+ HTY A+I G CK  +M  A+ML+  M
Sbjct: 333 YTSIISCNCRSGNVKRALVLFDEMT-DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           + +G+  N   + +LI G+C+ G  + A  L  +M K+G   +++AYN+I  GLCK  R 
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA  LL    +R +  + +++T L+  + K+    +A  +F  M + G  P+I  Y  L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  + ++  MKE+ K   E    GL P   T TS+I G   DG +  A+K F  M Q G 
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            P+ +TY A+ISGL K  + +EA + Y+ M   G++P +    +L 
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 205/412 (49%), Gaps = 12/412 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E F+ M  +G   D  S  + ++A  R G+V    R+   M++    +   +LT+++ 
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 233

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK----GWTEKAFRLFLKL 322
             C    RG ++   +L++E+  KG K NV T+   I+G  K+    G  E      L L
Sbjct: 234 GLCK---RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-----ILTL 285

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +  +    NV TYT +I G+    K+  A+ L E M+E+G+  +   YTS+I  +C+ GN
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            +RA  L D M  +G  P+ + Y A+I G+CK G+++ A  L+ +   + +  + + +  
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + +     +AL L   M K GL  D+ AY ++ +  C+  +  E++      +  G
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   ++T++I  Y ++GN   A + F+ M + G  P+ ITY  LI G  K+  + EA 
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           +  + +  +G+ P   T  +L +  C  G    A+ + + + ++  +  V T
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+   M   GV  +  +Y L++  +  +G++ EA R    M ++G   D    T +I+  
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G   ++K+A  L +EM  KG  P+ +T+  LI G+CK G  E A ++ +  ++    
Sbjct: 341 CRSG---NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA-QMLVNEMQGKGI 396

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             N   +  +I GYC+   ++ A  L   M+++GL  +   Y S+  G CK+   + A  
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M + G +PN  ++  +ID  CK+G   EA  + ++  ++    + ITY +L+  + 
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+   K+A  L   +   GL PD++  T+LI   C   K+  + K F E    GL P   
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           TYT+MI G  +DG    A K +  M + G  PD+  Y +L+  L
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 7/357 (1%)

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           LL   + D    G   +A E  E M +KG+  +  +  V +  L + G  +   R F ++
Sbjct: 160 LLFRVYADNKMFG---EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRM 216

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V  D  +  V++ T ++ G CK   +     L++ +  +G+  N  TY + I G+ K  +
Sbjct: 217 VNLD-VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
                +++ LM KEG   N+  Y  +I G    G+++EA  L ++  ++ ++AD   YT 
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 335

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++S + +    K+AL LF  M   GL P  H Y  LI   C+  +M+ ++    E    G
Sbjct: 336 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           +      + ++I GY   G +  A++    M + G   D   Y ++ SGLCK ++ DEA 
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
               SM+ +G+SP  ++  TL   YCK+G+   A  +   +++K     I T N LI
Sbjct: 456 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 512



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 5/299 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++S     G +K    +  EMT+ GL     T   ++   C+ G +E A+ + +EM
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+  +   +  ++  YC  G V EA R    M  +G   D      + +  C    +
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              K    LL  MV +G  PN  + T LID  CK+G   +A R+F ++    N  PN+ T
Sbjct: 452 DEAKG---LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV-PNIIT 507

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GY K   M  A  L + ++ +GL+P+  T TSLI+G C  G  + A  L D M 
Sbjct: 508 YNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 567

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           + G  PN+  Y A+I GL K GR +EA++L  +  +  L  D   Y+ L+   L  AE+
Sbjct: 568 QRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS-LHSAES 625



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 31/355 (8%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYC---KEEKMNRAEMLLE-------RMKEQGLLPNTN 368
           F   +R + YKP++  Y  +I       K +K+++++   E          + GL     
Sbjct: 74  FFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT 133

Query: 369 TYTSLIYGHCKVGNFERAY---DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
              SL+   C      RA       DL+ +      +YA N +       G   EA+E +
Sbjct: 134 VIASLVDDACNESKCNRAKFKEKFFDLLFR------VYADNKMF------GEALEAFEHM 181

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +K   +    D+ +  + L    +  +    L  F RMV   +   +++ T ++   C++
Sbjct: 182 EK---KGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKR 238

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             ++   K   E    G+     TY + I GY +  ++    +    M + G A + +TY
Sbjct: 239 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 298

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             LI G     K++EA + +E M  KGI        ++    C+ G+   A+++ + +  
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 358

Query: 606 KLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           K  I + +T   LI  +C   ++  A +  +++ GK  +++ V    L +   ES
Sbjct: 359 KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 413


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 225/480 (46%), Gaps = 8/480 (1%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           GL     T N V+G   +   V+     F  M A+G+C D +++ +++ A C  G+   A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
              L  M + G      T   L+  +C KG     K A +L++ M  KG   +V T+ V 
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKG---RYKAASQLIDCMASKGIGVDVCTYNVF 251

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ID LC+   + K + L LK +R +   PN  TY  +ISG+ +E K+  A  + + M    
Sbjct: 252 IDNLCRDSRSAKGY-LLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFN 310

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           LLPN+ TY +LI GHC  GN   A  LMD+M   G  PN   Y A+++GL K        
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            +L++     ++   I+YT ++    K    ++A+ L   M+K  +NPD+  ++ LI  F
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            R  K+  +++   +    GL P    Y+++I  Y + G +  A+  +  MN  G   D+
Sbjct: 431 FRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADH 490

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            T   L++  C+  KL+EA  F   M   G+ P  VT   +   Y   GD+  A  + + 
Sbjct: 491 FTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDK 550

Query: 603 LDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACYESN 658
           ++      ++ T   L++ LC    +  A  FFH+L      VD V     L + C   N
Sbjct: 551 MNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGN 610



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 227/483 (46%), Gaps = 7/483 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++  E G+ K    ++ +M  +G+     T N ++   C+ G  + A ++ D M ++G
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y + +   CR  R  +    L  M       +  T   LI+ F  +   G I+
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVRE---GKIE 297

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ +EM      PN  T+  LI G C  G   +A RL + ++ S   +PN  TY A+
Sbjct: 298 VATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL-MDVMVSHGLRPNEVTYGAL 356

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G  K  +      +LERM+  G+  +  +YT++I G CK G  E A  L+D M K   
Sbjct: 357 LNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSV 416

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  ++ +I+G  + G++  A E++ K ++  L  + I Y+ L+  + K    K+AL 
Sbjct: 417 NPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALN 476

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  M  +G   D      L+A FCR  K++E+E F       GL P   T+  +I GY 
Sbjct: 477 AYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYG 536

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G+   A   F +MN  G  P   TYG L+ GLC    ++EA +F+  +     +   V
Sbjct: 537 NSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNV 596

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
              T     C+ G+ + A+ ++  +    ++    T   LI  LC + ++  A L   K 
Sbjct: 597 IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKA 656

Query: 636 LGK 638
           + K
Sbjct: 657 IEK 659



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 222/482 (46%), Gaps = 32/482 (6%)

Query: 147 GNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G ++ A +++ CM S               +     R  +G+ ++  M  N +     T 
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++      G +E A +VFDEM    +  ++ +Y  ++  +C  G + EA R +  M+ 
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T   L+         G +     +LE M   G + +  ++T +IDGLCK G 
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSS---ILERMRMGGVRVSHISYTAMIDGLCKNGM 400

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E+A +L   +++  +  P+V T++ +I+G+ +  K+N A+ ++ +M + GL+PN   Y+
Sbjct: 401 LEEAVQLLDDMLKV-SVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYS 459

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LIY +CK+G  + A +   +M   G   + +  N ++   C+ G+++EA   +    + 
Sbjct: 460 TLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRM 519

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  + +T+  +++ +    +  +A  +F +M   G  P +  Y  L+   C    + E+
Sbjct: 520 GLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEA 579

Query: 492 EKFFQ------EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            KFF        A+   +F TK T T       R GN+S A+     M      PDN TY
Sbjct: 580 LKFFHRLRCIPNAVDNVIFNTKLTSTC------RSGNLSDAIALINEMVTNDFLPDNFTY 633

Query: 546 GALISGLCKQSKLDEACQFYESMIGKG-ISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
             LI+GLCK+ K+  A       I KG +SP      +L     K G +  A+ I E + 
Sbjct: 634 TNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEML 693

Query: 605 KK 606
            K
Sbjct: 694 NK 695



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 228/525 (43%), Gaps = 41/525 (7%)

Query: 153  HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
            H     +V++F   G+L+E    +  M+  GL   + T + ++      G    A  VFD
Sbjct: 490  HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFD 549

Query: 213  EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +M + G      +Y  ++   C  G + EA ++   +      +DN      +T+ C  G
Sbjct: 550  KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSG 609

Query: 273  FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               ++  A  L+ EMV   + P+ +T+T LI GLCKKG    A  L  K +      PN 
Sbjct: 610  ---NLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNP 666

Query: 333  HTYTAMISG-----------------------------------YCKEEKMNRAEMLLER 357
              YT+++ G                                   Y ++ K ++   +L  
Sbjct: 667  AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 358  MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
            MK + L  N  TY  L++G+ K     R + L   M + G  P+ ++++++I G C+   
Sbjct: 727  MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 418  VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
               A ++L+         D+ T+ +L+++  ++ E K+A  L  +M +  + P++  Y  
Sbjct: 787  FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 478  LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            L     R     ++ +  Q  + +G  PT + Y ++I G  R GNI  A+K    M  +G
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 538  CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             +  N+   A++ GL    K++ A    + M+   I P   T  TL + YCK+ + A A+
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 598  ---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
                I+E    KL +   N LI  LC+   +  A   + ++  +D
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRD 1011



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 209/472 (44%), Gaps = 11/472 (2%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G    +H     M+    + G L+E   ++ +M    +     T + ++     +G +  
Sbjct: 379 GGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINN 438

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+E+  +M   G+  +   Y  ++  YC+MG + EA    + M   G + D+ T  +L+ 
Sbjct: 439 AKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVA 498

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC     G +++A   +  M R G  PN  T   +I+G    G   KAF +F K+  S 
Sbjct: 499 TFCR---YGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM-NSF 554

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN---TNTYTSLIYGHCKVGNF 383
            + P++ TY  ++ G C    +N A     R++    +PN      + + +   C+ GN 
Sbjct: 555 GHFPSLFTYGGLLKGLCIGGHINEALKFFHRLR---CIPNAVDNVIFNTKLTSTCRSGNL 611

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTI 442
             A  L++ M      P+ + Y  +I GLCKKG++  A  L  KA ++  L  +   YT 
Sbjct: 612 SDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTS 671

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+   LK    + AL +F  M+   + PD  A+  +I  + R+ K  +         +  
Sbjct: 672 LVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKN 731

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L     TY  ++ GY +   ++     ++ M + G  PD  ++ +LI G C+    D A 
Sbjct: 732 LCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAI 791

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           +    +  +G      T   L  ++C++ +   A  +++ +++ + I  V+T
Sbjct: 792 KILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 3/305 (0%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL P+  T   ++    K    +  +     M  +G  P++  +N +++ LC++G+
Sbjct: 131 MGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGK 190

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            + A  LL+K  +  +    +TY  LL+ + K+   K A  L   M   G+  D+  Y  
Sbjct: 191 FKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNV 250

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            I   CR  +  +     +      ++P + TY ++I G++R+G I  A K F  M+   
Sbjct: 251 FIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFN 310

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P++ITY  LI+G C    + EA +  + M+  G+ P EVT   L     K  +     
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370

Query: 598 IILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            ILE +     ++   +   +I  LC    +  A      +L    N D V+ + L N  
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430

Query: 655 YESNK 659
           +   K
Sbjct: 431 FRVGK 435



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 100/212 (47%)

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           LMG  G  P++Y  N ++  L K+ +V   +   K    + +  D  T+ ILL+   ++ 
Sbjct: 130 LMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERG 189

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + K A  L  +M ++G+ P    Y TL+  +C++ + K + +      + G+     TY 
Sbjct: 190 KFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYN 249

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             I    RD   +      +RM +    P+ ITY  LISG  ++ K++ A + ++ M   
Sbjct: 250 VFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLF 309

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            + P  +T  TL   +C  G+   A+ +++ +
Sbjct: 310 NLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 3/279 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   ++ +I    +   V +A +       R L     T  ++L   +K+ +     
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M+  G+ PD+  +  L+ A C + K K +    ++   +G++PT  TY +++  Y
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G   +A +    M   G   D  TY   I  LC+ S+  +     + M    + P E
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           +T  TL   + ++G    A  + + +     +    T NTLI   C+   +G A      
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
           ++      + V+  AL N  Y++ ++ + S + +R+  G
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMG 379



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)

Query: 141  TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
              LI   +F +AH V+Q ++ S   +   K+  +++     NG+              C 
Sbjct: 849  NGLIRTSDFHKAHRVLQVLLES-GSVPTNKQYITLI-----NGM--------------CR 888

Query: 201  LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            +G ++ A ++ DEM   G+ +   +   +V       ++  A   L  ML+   I   AT
Sbjct: 889  VGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVAT 948

Query: 261  LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             T L+  +C +    ++ +A EL   M     K +V  + VLI GLC  G  E AF+L+ 
Sbjct: 949  FTTLMHVYCKE---ANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYE 1005

Query: 321  KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            ++ + D + PN   Y  +I  +C       +E LL  ++++ L+
Sbjct: 1006 EMKQRDLW-PNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELM 1048


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 217/432 (50%), Gaps = 9/432 (2%)

Query: 154 EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +V+ C  ++  F   G+ K+   ++  + N+G      T N ++G  C+ G ++ A EV 
Sbjct: 140 DVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL 199

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M    V  D  +Y  ++ + C  G++ EA   L   L R    D  T T+LI A C+ 
Sbjct: 200 ERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCND 256

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G   QA +LL+EM +KG KP+V T+ VLI+G+CK+G  ++A + FL  + S   KPN
Sbjct: 257 SGVG---QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIK-FLNNMPSYGCKPN 312

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T+  ++   C   +   AE LL  M  +G  P+  T+  LI   C+     RA D+++
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K GC PN  +YN ++ G C++ ++  A E L+    R    D +TY  LL+   K  
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A+ +  ++   G +P +  Y T+I    +  K + + +  +E    GL P   TY+
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G  R+G +  A+K F  M  +   P  +TY A++ GLCK  +   A  F   M+ K
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552

Query: 572 GISPCEVTRVTL 583
           G  P E T   L
Sbjct: 553 GCKPTEATYTIL 564



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 220/440 (50%), Gaps = 10/440 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E   +  + M  +G   D  +   ++  +CR G+  +A R +  + + GA+ D  T 
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI  +C  G    I +A E+LE M      P+V T+  ++  LC  G  ++A  +  +
Sbjct: 180 NVLIGGYCKSG---EIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 233

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++ + Y P+V TYT +I   C +  + +A  LL+ M+++G  P+  TY  LI G CK G
Sbjct: 234 QLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   ++ M   GC PN+  +N I+  +C  GR  +A  LL    ++      +T+ 
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +A+ +  +M K G  P+  +Y  L+  FC++KKM  + ++ +  ++ 
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY +++    +DG + +AV+   +++  GC+P  ITY  +I GL K  K + A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRK 618
            +  E M  KG+ P  +T  TL     ++G    A+ I   +E L  K    T N ++  
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 619 LCSEKRVGMAALFFHKLLGK 638
           LC  ++   A  F   ++ K
Sbjct: 533 LCKAQQTSRAIDFLAYMVEK 552



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + E  ++L  M+ +G I D    T LI  FC     G  K+A  ++E +   G  P
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRS---GKTKKATRIMEILENSGAVP 174

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+ VLI G CK G  +KA  +  ++    +  P+V TY  ++   C   K+  A  +
Sbjct: 175 DVITYNVLIGGYCKSGEIDKALEVLERM----SVAPDVVTYNTILRSLCDSGKLKEAMEV 230

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+R  ++   P+  TYT LI   C      +A  L+D M K+GC P++  YN +I+G+CK
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +GR+ EA + L        + + IT+ I+L           A  L   M++ G +P +  
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVT 350

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   CR++ +  +    ++    G  P   +Y  ++ G+ ++  +  A++Y + M 
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K+D A +    +  KG SP  +T  T+     K G + 
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            A+ +LE + +K     I T +TL+R L  E +V  A   FH + G
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEG 516



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 33/250 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++ +M   G      T N ++   C   L+  A +V ++M   G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
              ++ SY  ++  +C+  ++  A  +L  M+ RG   D  T   L+TA C  G      
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G  + A ELLEEM RKG KP++ T++ L+ GL
Sbjct: 439 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            ++G  ++A ++F  +    + KP+  TY A++ G CK ++ +RA   L  M E+G  P 
Sbjct: 499 GREGKVDEAIKIFHDM-EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557

Query: 367 TNTYTSLIYG 376
             TYT LI G
Sbjct: 558 EATYTILIEG 567



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 6/198 (3%)

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            I L + ++  E ++ L    RM+  G  PD+ A T+LI  FCR  K K++ +  +    
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G  P   TY  +I GY + G I  A++  +RM+    APD +TY  ++  LC   KL E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKE 226

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIR 617
           A +  +  + +   P  +T   L    C       AM +L+ + K   K  + T N LI 
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 618 KLCSEKRVGMAALFFHKL 635
            +C E R+  A  F + +
Sbjct: 287 GICKEGRLDEAIKFLNNM 304



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 35/268 (13%)

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           +A N  +  L + G ++E  + L++   +    D I  T L+    +  +TK+A  +   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 463 MVKAGLNPDIHAYTTLIAAFCR--------------------------------QKKMKE 490
           +  +G  PD+  Y  LI  +C+                                  K+KE
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +     +    +P   TYT +I     D  +  A+K    M + GC PD +TY  LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           G+CK+ +LDEA +F  +M   G  P  +T   +    C  G    A  +L  + +K    
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            + T N LI  LC ++ +G A     K+
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKM 374



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 79/182 (43%), Gaps = 13/182 (7%)

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             R  +++E  KF +  I  G  P     TS+I G+ R G    A +  + +   G  PD
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            ITY  LI G CK  ++D+A +  E M    ++P  VT  T+    C  G    AM   E
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAM---E 229

Query: 602 SLDKKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-C 654
            LD++L       + T   LI   C++  VG A     ++  K    D V+   L N  C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 655 YE 656
            E
Sbjct: 290 KE 291



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +   +K+ +RM   G  PD I   +LI G C+  K  +A +  E +   G  P  
Sbjct: 117 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   L   YCK G+   A+ +LE +     + T NT++R LC   ++  A     + L 
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           ++   D ++   L  A C +S
Sbjct: 237 RECYPDVITYTILIEATCNDS 257


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 219/450 (48%), Gaps = 20/450 (4%)

Query: 141 TSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
            +L+ NG    AH V Q                MV++F + G++ E    V +M N G+ 
Sbjct: 165 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 224

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T + ++     LG VE A+ V   M  +GV  +  +Y L++  YC+  ++ EA++ 
Sbjct: 225 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 284

Query: 246 LSAMLDRGAIL-DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           L  M +  A++ D     +LI  +C  G    I  A  LL+EM+R G K N++    LI+
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLIN 341

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G CK+G   +A  +  ++V   N KP+ ++Y  ++ GYC+E   + A  L ++M ++G+ 
Sbjct: 342 GYCKRGEIHEAEGVITRMVDW-NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P   TY +L+ G C+VG F+ A  +  LM K G  P+   Y+ ++DGL K    + A  L
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K    R     +IT+  ++S   K  +  +A  +F +M   G +PD   Y TLI  +C+
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              + ++ K         + P+ E Y S+I G  +   +         M   G  P+ +T
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGIS 574
           YGALI G CK+  LD+A   Y  M   G+S
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLS 610



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 243/529 (45%), Gaps = 14/529 (2%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           ERA+ V+   +  +   G++ +   ++ EM   GL       N ++   C+ G +  AE 
Sbjct: 298 ERAYGVL---IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M    +  D+ SY  ++  YCR G  +EA      ML  G      T   L+   C
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G   +   A ++   M+++G  P+   ++ L+DGL K    E A  L+ K + +  + 
Sbjct: 415 RVG---AFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW-KDILARGFT 470

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +  T+  MISG CK  KM  AE + ++MK+ G  P+  TY +LI G+CK  N  +A+ +
Sbjct: 471 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 530

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M +E  +P+I  YN++I GL K  R+ E  +LL +   R L  + +TY  L+    K
Sbjct: 531 KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 590

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           +    +A   +  M + GL+ +I   +T+++   R  ++ E+    Q+ +  G FP  E 
Sbjct: 591 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 650

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +       +R   I           +    P+NI Y   I+GLCK  K+D+A +F+  + 
Sbjct: 651 FLK---SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 707

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
            KG  P   T  TL + Y   G+   A  + + + ++     I T N LI  LC  + V 
Sbjct: 708 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 767

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
            A   FHKL  K    + V+   L +  C   N  A F    + I EGI
Sbjct: 768 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 217/441 (49%), Gaps = 8/441 (1%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +  + ++ +  E GL + A  VFD M   G      S   ++    + G    A      
Sbjct: 123 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 182

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M+  G + D   +++++ AFC  G    + +A   +++M   G +PN+ T+  LI+G   
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDG---KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 239

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNT 367
            G  E A +  LK +       NV TYT +I GYCK+ KM+ AE +L  M+E+  L+P+ 
Sbjct: 240 LGDVEAA-KGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             Y  LI G+C+ G  + A  L+D M + G   N++  N++I+G CK+G + EA  ++ +
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                L+ D  +Y  LL  + ++  T +A  L  +M++ G+ P +  Y TL+   CR   
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
             ++ + +   +  G+ P +  Y++++ G  +  N   A   ++ +   G     IT+  
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +ISGLCK  K+ EA + ++ M   G SP  +T  TL   YCK  +   A  +  +++++ 
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 608 W---IRTVNTLIRKLCSEKRV 625
               I   N+LI  L   +R+
Sbjct: 539 ISPSIEMYNSLISGLFKSRRL 559



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 202/427 (47%), Gaps = 3/427 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F  +  V   ++  + E G  K    +   M   G      + N ++    + G    A 
Sbjct: 118 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            V+ +M   G+  D     +MV A+C+ G+V EA  ++  M + G   +  T   LI  +
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                 G ++ A  +L+ M  KG   NV T+T+LI G CK+   ++A ++   +      
Sbjct: 238 VS---LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 294

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+   Y  +I GYC+  K++ A  LL+ M   GL  N     SLI G+CK G    A  
Sbjct: 295 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           ++  M      P+ Y+YN ++DG C++G   EA+ L  K  Q  ++   +TY  LL    
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +      AL ++  M+K G+ PD   Y+TL+    + +  + +   +++ +  G   ++ 
Sbjct: 415 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 474

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+ +MI G  + G +  A + F +M  +GC+PD ITY  LI G CK S + +A +   +M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 569 IGKGISP 575
             + ISP
Sbjct: 535 EREPISP 541



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 197/449 (43%), Gaps = 36/449 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +   G   E F++  +M   G+     T N ++   C +G  + A +++  M  RG
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y  ++    +M     A      +L RG      T   +I+  C     G + 
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK---MGKMV 490

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ ++M   G  P+  T+  LIDG CK     +AF++   + R +   P++  Y ++
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER-EPISPSIEMYNSL 549

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG  K  ++     LL  M  +GL PN  TY +LI G CK G  ++A+     M + G 
Sbjct: 550 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKK---------------------AFQRE----- 432
           + NI   + ++ GL + GR+ EA  L++K                     A Q+      
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 433 ------LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 L  + I Y I ++   K  +   A   F  +   G  PD   Y TLI  +    
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            + E+ +   E +  GL P   TY ++I G  +  N+  A + F +++Q G  P+ +TY 
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 789

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISP 575
            LI G CK   +D A +  + MI +GISP
Sbjct: 790 TLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 24/284 (8%)

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY-NAIIDGLCK-KG 416
           K+Q   PN  +Y  L++    + +  R YD               AY N ++D LCK K 
Sbjct: 60  KQQNFRPNVKSYCKLVH----ILSRGRMYD------------ETRAYLNQLVD-LCKFKD 102

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R    ++ L   + RE       + ++L  ++++  TK AL +F  M K G  P + +  
Sbjct: 103 RGNVIWDELVGVY-REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCN 161

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +L+    +  +   +   +Q+ I  G+ P     + M+  + +DG +  A  + ++M  +
Sbjct: 162 SLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL 221

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P+ +TY +LI+G      ++ A    + M  KG+S   VT   L   YCKQ     A
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281

Query: 597 MIILESLDKKLWI----RTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +L  + ++  +    R    LI   C   ++  A     ++L
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 325


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 233/468 (49%), Gaps = 14/468 (2%)

Query: 142 SLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           +++ +GN     +++ C  ++  F  +G+ ++   ++  +  +G      T N ++   C
Sbjct: 127 NMVYHGNVP---DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           + G +  A  V D M    V  D  +Y  ++ + C  G++ +A   L  ML R    D  
Sbjct: 184 KAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T T+LI A C D G    +  A +LL+EM  +G  P+V T+ VL++G+CK+G  ++A + 
Sbjct: 241 TYTILIEATCRDSG----VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK- 295

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           FL  + S   +PNV T+  ++   C   +   AE LL  M  +G  P+  T+  LI   C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G   RA D+++ M + GC PN  +YN ++ G CK+ ++  A E L++   R    D +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +L+   K  + + A+ +  ++   G +P +  Y T+I    +  K  ++ K   E 
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P   TY+S++ G  R+G +  A+K+F    ++G  P+ +T+ +++ GLCK  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           D A  F   MI +G  P E +   L      +G +  A+ +L  L  K
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 207/415 (49%), Gaps = 7/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S + + G +    S++  M+ +  P +  T N ++   C+ G ++ A EV D M  R 
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS--PDVV-TYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++ A CR   V  A + L  M DRG   D  T  +L+   C +G    + 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG---RLD 291

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + L +M   G +PNV TH +++  +C  G    A +L   ++R   + P+V T+  +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNIL 350

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C++  + RA  +LE+M + G  PN+ +Y  L++G CK    +RA + ++ M   GC
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN ++  LCK G+V++A E+L +   +      ITY  ++    K  +T +A+ 
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M    L PD   Y++L+    R+ K+ E+ KFF E    G+ P   T+ S++ G  
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +      A+ +   M   GC P+  +Y  LI GL  +    EA +    +  KG+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 215/435 (49%), Gaps = 12/435 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E   +  + M   G   D      ++  +CR+G+  +A + L  +   GA+ D  T 
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            ++I+ +C  G    I  A  +L+ M      P+V T+  ++  LC  G  ++A  +  +
Sbjct: 176 NVMISGYCKAG---EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +++ D Y P+V TYT +I   C++  +  A  LL+ M+++G  P+  TY  L+ G CK G
Sbjct: 230 MLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   ++ M   GC PN+  +N I+  +C  GR  +A +LL    ++      +T+ 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +A+ +  +M + G  P+  +Y  L+  FC++KKM  + ++ +  ++ 
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY +M+    +DG +  AV+   +++  GC+P  ITY  +I GL K  K  +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIR 617
            +  + M  K + P  +T  +L     ++G    A+      + ++ IR    T N+++ 
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGIRPNAVTFNSIML 527

Query: 618 KLCSEKRVGMAALFF 632
            LC  ++   A  F 
Sbjct: 528 GLCKSRQTDRAIDFL 542



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 4/175 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G VE A E+ +++ ++G      +Y  ++    + G+  +A + L  M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +    D  T + L+     +G    + +A +   E  R G +PN  T   ++ GLCK 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREG---KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             T++A   FL  + +   KPN  +YT +I G   E     A  LL  +  +GL+
Sbjct: 533 RQTDRAID-FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R G +    K+ + M   G  PD I    LI G C+  K  +A +  E + G G  P  
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   +   YCK G+   A+ +L+ +     + T NT++R LC   ++  A     ++L 
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           +D   D ++   L  A C +S
Sbjct: 233 RDCYPDVITYTILIEATCRDS 253


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 268/557 (48%), Gaps = 36/557 (6%)

Query: 103 VVASLAN-EAGSMVALSFFYWAIGF-AKFRHFMRLYIVCATSLISN-GNFERAHEVMQCM 159
           V A LA    G   A +    A+ F +  RHF+  YI    +  S+  +F+    ++ C+
Sbjct: 158 VAAHLAVLRGGGGAARAILSRAVRFPSPHRHFVEHYISTYKTFSSDPASFDF---LLLCL 214

Query: 160 VSSFAEIGRLKE-GFSMVIEMTN---NGLPLITS-------------TLNRVVGIACELG 202
            S+   + RL++ G S   E  N   + LPL  +             + N ++   C+ G
Sbjct: 215 PSA-PLLRRLRQYGISPSPEACNAVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAG 273

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL- 261
            V+ A ++FDEM +     D  +Y +++  +C +G +  A + L  M+  G +  NAT+ 
Sbjct: 274 RVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMV-AGGVEPNATVY 329

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T ++   CDKG+   I  A  ++E+MV++    +   +T ++ G C KG    A R F +
Sbjct: 330 TSVVALLCDKGW---ISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDE 386

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + R       V TYT MI+G C+  ++  AE LL+ M  + L  +  TYT LI G+CK G
Sbjct: 387 MQRKGLATDGV-TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRG 445

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
               A+ + + M + G TPN+  Y A+ DGLCK+G VQ A ELL +   + L+ +  TY 
Sbjct: 446 KMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYN 505

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L++   K    +QA+     M  A L PD++ YTTLI A C+   +  +    QE +  
Sbjct: 506 SLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK 565

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ PT  TY  ++ G+   G +    K    M +    P+  TY +L+   C ++ +   
Sbjct: 566 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKST 625

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRK 618
            + Y+ M  + + P E T   L   +CK  +   A+   + + +K   L   + + LIR 
Sbjct: 626 TEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRL 685

Query: 619 LCSEKRVGMAALFFHKL 635
           L  +K+   A   FH +
Sbjct: 686 LNKKKKFVEARELFHDM 702



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 203/416 (48%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G L+    ++ EM   G+    +    VV + C+ G +  A  V ++M  R 
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D + Y  ++  +C  G +  A RW   M  +G   D  T T +I   C       ++
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAV---ELE 413

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL+EM  +    +  T+TVLIDG CK+G   +AF++   +V+     PNV TYTA+
Sbjct: 414 EAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQR-GVTPNVVTYTAL 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
             G CK+  +  A  LL  M  +GL  N  TY SLI G CK G  E+A   M  M     
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACL 532

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++Y Y  +ID LCK G +  A+ LL++   + ++   +TY +L++        +    
Sbjct: 533 KPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKK 592

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++  ++P+   Y +L+  +C +  MK + + ++   +  + P + TY  +I G+ 
Sbjct: 593 LLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHC 652

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +  N+  A+ +   M Q G      +Y ALI  L K+ K  EA + +  M  +G++
Sbjct: 653 KARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLT 708



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 4/427 (0%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G  E    V   +V+   + G + +   +V +M    + L  +    V+   C  G +  
Sbjct: 320 GGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVS 379

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A   FDEM  +G+  D  +Y  M+   CR   + EA++ L  M  R   +D  T T+LI 
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C    RG + +AF++   MV++G  PNV T+T L DGLCK+G  + A  L L  + + 
Sbjct: 440 GYCK---RGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANEL-LHEMSNK 495

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             + N  TY ++I+G CK   + +A   +  M    L P+  TYT+LI   CK G+ +RA
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + L+  M  +G  P I  YN +++G C  GRV+   +LL    ++ +  +  TY  L+ +
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +  +   K    ++  M    + P+ + Y  LI   C+ + MKE+  F  E I  G   T
Sbjct: 616 YCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLT 675

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y+++I    +      A + F  M + G   ++  Y   I     +  L+      +
Sbjct: 676 ATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCD 735

Query: 567 SMIGKGI 573
            ++   I
Sbjct: 736 ELVEASI 742



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 182/404 (45%), Gaps = 46/404 (11%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A EL +E+  K    NV ++ +L+  LC  G  + A +LF ++  +    P+V 
Sbjct: 241 RLPLDEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMASA----PDVV 292

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI------------------- 374
           TY  +I G+C   ++  A  LL+ M   G+ PN   YTS++                   
Sbjct: 293 TYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDM 352

Query: 375 ----------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                            G C  G+   A    D M ++G   +   Y  +I+GLC+   +
Sbjct: 353 VQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVEL 412

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA +LL++ + R L  D++TYT+L+  + K+ +  +A  +   MV+ G+ P++  YT L
Sbjct: 413 EEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTAL 472

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
               C+Q  ++ + +   E    GL     TY S+I G  + G +  A++    M+    
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACL 532

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  LI  LCK   LD A    + M+ KGI P  VT   L   +C  G       
Sbjct: 533 KPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKK 592

Query: 599 ILE-SLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +L+  L+K +     T N+L+++ C E  +      +  +  +D
Sbjct: 593 LLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 147/303 (48%), Gaps = 14/303 (4%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL R+++ G+ P+     +++         + A +L     +E    N+ +YN ++  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVL----SRLPLDEAIELF----QELPHKNVCSYNILLKALC 270

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GRV++A +L  +        D +TY IL+  H    E + A+ L   MV  G+ P+  
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YT+++A  C +  + ++ +  ++ +   +   +  YT+++ G+   G++ SA ++F  M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G A D +TY  +I+GLC+  +L+EA +  + M  + +   EVT   L   YCK+G  
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           A A  +  ++ ++     + T   L   LC +  V  A    H++  K   ++  +  +L
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 651 KNA 653
            N 
Sbjct: 508 ING 510



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 4/248 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +SN   E        +++   + G L++    + +M    L     T   ++   C+ G 
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +  EM  +G+     +Y +++  +C  GRV    + L  ML++    + AT   
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  +C      ++K   E+ + M  +   PN  T+ +LI G CK    ++A     +++
Sbjct: 612 LMKQYC---IENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +   ++    +Y+A+I    K++K   A  L   M+++GL   ++ Y   I  +    N 
Sbjct: 669 QK-GFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNL 727

Query: 384 ERAYDLMD 391
           E    L D
Sbjct: 728 ESTLALCD 735


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 219/450 (48%), Gaps = 20/450 (4%)

Query: 141 TSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
            +L+ NG    AH V Q                MV++F + G++ E    V +M N G+ 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T + ++     LG VE A+ V   M  +GV  +  +Y L++  YC+  ++ EA++ 
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 246 LSAMLDRGAIL-DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           L  M +  A++ D     +LI  +C  G    I  A  LL+EM+R G K N++    LI+
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLIN 375

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G CK+G   +A  +  ++V   N KP+ ++Y  ++ GYC+E   + A  L ++M ++G+ 
Sbjct: 376 GYCKRGEIHEAEGVITRMVDW-NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P   TY +L+ G C+VG F+ A  +  LM K G  P+   Y+ ++DGL K    + A  L
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K    R     +IT+  ++S   K  +  +A  +F +M   G +PD   Y TLI  +C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              + ++ K         + P+ E Y S+I G  +   +         M   G  P+ +T
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGIS 574
           YGALI G CK+  LD+A   Y  M   G+S
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLS 644



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/584 (26%), Positives = 272/584 (46%), Gaps = 37/584 (6%)

Query: 53  SSPSPPQSLVKTVCSMVLESYYQQFHLR--SSPPRLNLQIDIDSLTHEQAITVVASLAN- 109
           S P+PP+ LV  +C +VL        LR  ++  +LN     D         V A L N 
Sbjct: 36  SHPAPPE-LVSRICRLVL--------LRRCNAISKLNFVFSDD--------IVDAVLRNL 78

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCA-TSLISNGNFERAHEVMQCMVSSFAEIGR 168
                 +L FF +      FR  ++ Y  C    ++S G   R ++  +  ++   ++ +
Sbjct: 79  RLNPTASLGFFQFVSKQQNFRPNVKSY--CKLVHILSRG---RMYDETRAYLNQLVDLCK 133

Query: 169 LKEGFSMVIEM---TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
            K+  +++ +             +  + ++ +  E GL + A  VFD M   G      S
Sbjct: 134 FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRS 193

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
              ++    + G    A      M+  G + D   +++++ AFC  G    + +A   ++
Sbjct: 194 CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG---KVDEAAGFVK 250

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M   G +PN+ T+  LI+G    G  E A +  LK +       NV TYT +I GYCK+
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAA-KGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 346 EKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            KM+ AE +L  M+E+  L+P+   Y  LI G+C+ G  + A  L+D M + G   N++ 
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            N++I+G CK+G + EA  ++ +     L+ D  +Y  LL  + ++  T +A  L  +M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P +  Y TL+   CR     ++ + +   +  G+ P +  Y++++ G  +  N  
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A   ++ +   G     IT+  +ISGLCK  K+ EA + ++ M   G SP  +T  TL 
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 585 YEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
             YCK  +   A  +  +++++     I   N+LI  L   +R+
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 244/561 (43%), Gaps = 43/561 (7%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           ERA+ V+   +  +   G++ +   ++ EM   GL       N ++   C+ G +  AE 
Sbjct: 332 ERAYGVL---IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M    +  D+ SY  ++  YCR G  +EA      ML  G      T   L+   C
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G   +   A ++   M++ G  P+   ++ L+DGL K    E A  L+ K + +  + 
Sbjct: 449 RVG---AFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLW-KDILARGFT 504

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +  T+  MISG CK  KM  AE + ++MK+ G  P+  TY +LI G+CK  N  +A+ +
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M +E  +P+I  YN++I GL K  R+ E  +LL +   R L  + +TY  L+    K
Sbjct: 565 KGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCK 624

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE- 508
           +    +A   +  M + GL+ +I   +T+++   R  ++ E+    Q+ +  G FP  E 
Sbjct: 625 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 684

Query: 509 -------------------------------TYTSMICGYLRDGNISSAVKYFQRMNQIG 537
                                           Y   I G  + G +  A ++F  ++  G
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PDN TY  LI G      +DEA +  + M+ +G+ P  VT   L    CK  +   A 
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA- 653
            +   L +K     + T NTLI   C    +  A     K++ +  +   V+ +AL N  
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 654 CYESNKYALFSDLSQRIAEGI 674
           C   +       L+Q I  G+
Sbjct: 865 CKHGDIERSMKLLNQMIKAGV 885



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 193/395 (48%), Gaps = 7/395 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C++G +  AEE+FD+M   G   D  +Y+ ++  YC+   V +A +   AM
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            +R  I  +  +   + +   K  R  + +  +LL EM  +G  PN+ T+  LIDG CK+
Sbjct: 569 -EREXISPSIEMYNSLISGLFKSRR--LVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKE 625

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KAF  + ++   +    N+   + M+SG  +  +++ A +L+++M + G  P+   
Sbjct: 626 GMLDKAFSSYFEMT-ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD--- 681

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +   +    +    ++  D +D   K    PN   YN  I GLCK G+V +A        
Sbjct: 682 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    D  TY  L+  +       +A  L   M++ GL P+I  Y  LI   C+ + + 
Sbjct: 742 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 801

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++ F +    GLFP   TY ++I GY + GN+ +A K   +M + G +P  +TY ALI
Sbjct: 802 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +GLCK   ++ + +    MI  G+    +   TL 
Sbjct: 862 NGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 15/438 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GRL E      +M           +N ++   C+ G ++ A  +F     RG
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF-----RG 63

Query: 219 VCADAS--SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRG 275
           +    S  +  +++  +C +  + +A      M    A++  AT  T +I  +C      
Sbjct: 64  IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD--- 120

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + QA +LLEE        +V   T +  G CK    ++A++L L +V   + KP++  +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I G+CK  ++  A  +LE +   G +PN  TYT+LI G CK GN   A  L  ++  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 396 EG--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                 PN+  +NA+I GLCK  R++ A+EL+K+   R+L+AD  TYT L+    KQ  T
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +   +F  M++ G NP +  YTTL+ A C+   ++++++  +  +  G+ P   TYT +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G   +G + +A ++F+++ +  C P  + Y AL+ G CK + +DEA ++Y  M+ + +
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 574 SPCEVTRVTLAYEYCKQG 591
           +P   T   L    CK+G
Sbjct: 419 APDPATCKLLVEMLCKRG 436



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 193/402 (48%), Gaps = 27/402 (6%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++   C+ GR+ EA    + ML+R  + +   + LL+ + C  G   ++ QA  + 
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAG---TMDQAMAIF 61

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             +      P+V T  +LI+G C+    +KA  LF ++ ++    P   TYTA+I  YCK
Sbjct: 62  RGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCK 118

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIY 403
            +++++A  LLE  +      +    TS+  G CK    + AY L+ D++ K+   P+I 
Sbjct: 119 MDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV 176

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           A+N II G CK GRV+EAYE+L+         + +TYT L+    K     +AL LF  +
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236

Query: 464 VKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
                   P++  +  LI+  C+  +++ + +  ++     L     TYT+++ G  + G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             S   + F+ M + GC P  +TY  L+   CK   L +A Q   SM+ KGI P      
Sbjct: 297 RTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP------ 350

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
                     D  T  ++LE L +   +RT      K+  E+
Sbjct: 351 ----------DVTTYTVLLEGLFENGKVRTATEFFEKILRER 382



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 186/374 (49%), Gaps = 10/374 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           TLN ++   CEL L++ A E+F EM     +  +A++Y  ++  YC+M R+ +A + L  
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTHTVLIDGLC 307
                   D   +T +   FC K  R  + +A++LL +MV +K  KP++    V+I G C
Sbjct: 132 --SSCCSSDVIAITSVARGFC-KAQR--VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM--KEQGLLP 365
           K G   +A+ +   LV S    PN  TYT +I G+CK   ++ A  L + +  ++    P
Sbjct: 187 KAGRVREAYEMLETLV-SMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEP 245

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  T+ +LI G CK    E A++L+  M       + + Y  ++DGLCK+GR  E   + 
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVF 305

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  +       +TYT L+  H K    + A  +   MV  G+ PD+  YT L+      
Sbjct: 306 EEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFEN 365

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K++ + +FF++ +     P    Y++++ G  +   +  AVKY+  M     APD  T 
Sbjct: 366 GKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 546 GALISGLCKQSKLD 559
             L+  LCK+ + D
Sbjct: 426 KLLVEMLCKRGRTD 439



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 180/399 (45%), Gaps = 40/399 (10%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLF-------------------------------LKL 322
           PN +T +VLI GLCK G   +A   +                               + +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            R     P+V T   +I+G+C+ + +++A E+  E  K   L+P   TYT++I  +CK+ 
Sbjct: 61  FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITY 440
             ++A  L++      C+ ++ A  ++  G CK  RV EAY+LL    +++  + D + +
Sbjct: 121 RLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            +++    K    ++A  +   +V  G  P+   YTTLI  FC+   + E+ + F+   +
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 501 AGLF--PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ ++I G  +   +  A +  ++M       D  TY  L+ GLCKQ + 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
            E  + +E M+ +G +P  VT  TL + +CK G    A  ++ S+  K     + T   L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           +  L    +V  A  FF K+L +      V  +AL   C
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 47/383 (12%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  T++ +I+G CK  ++  A     +M E+  +PN      L+   C+ G  ++A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQA--- 57

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL---LKKAFQRELQADKITYTILLSE 446
           M +     C+P++   N +I+G C+   + +A EL   ++K F   L  +  TYT ++  
Sbjct: 58  MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFA--LVPEATTYTAIIKC 115

Query: 447 HLKQAETKQALGL--------------------FCR-------------MV-KAGLNPDI 472
           + K     QA  L                    FC+             MV K    PDI
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            A+  +I  FC+  +++E+ +  +  ++ G  P   TYT++I G+ + GN+S A++ F+ 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 533 MNQIG--CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++       P+ +T+ ALISGLCK  +L+ A +  + M  + +     T  TL    CKQ
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 591 GDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           G ++    + E + ++     + T  TL+   C    +  A      ++ K    D  + 
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 648 AALKNACYESNKYALFSDLSQRI 670
             L    +E+ K    ++  ++I
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 230/466 (49%), Gaps = 11/466 (2%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F EM AR VC D S++ +++   C  G++ +A   L  M + G +    T   ++  +C 
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           KG     K A EL+++M  KG + +  T+ +L+D LCK   + K + L LK +R     P
Sbjct: 216 KG---RYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGY-LLLKKMRKRMISP 271

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  TY ++I+G+ KE K+  A  + + M    LLPN  TY +LI GHC  GNFE+A  ++
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           ++M   G  PN  +Y+A+++GLC+  + + +  +L++     +    I YT ++    + 
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN 391

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +++ L  +M+K G+ PD+  ++ LI  FCR  K+K  ++   +   AGL P    Y
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY 451

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T++I  Y + G++  A K +  M++IG   +      L+S LCK  K+  A  F+  M  
Sbjct: 452 TTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGM 627
            G  P  +T   +   Y   G+   A  + + + K        T   L++ LC   +   
Sbjct: 512 IGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKE 571

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           A     KL      VD V+   +    ++S    +  ALF ++ QR
Sbjct: 572 AKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQR 617



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 229/475 (48%), Gaps = 7/475 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+LK+   ++ +M  +G      T N V+   C+ G  + A E+ D+M ++G+ ADA +Y
Sbjct: 182 GKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTY 241

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            ++V   C+  R  +    L  M  R    +  T   +I  F  +   G I  A  + +E
Sbjct: 242 NMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKE---GKIGAATRIFQE 298

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M      PN  T+  LIDG C  G  E+A  + L+++ +   KPN  +Y+A+++G C+  
Sbjct: 299 MSMLNLLPNCVTYNALIDGHCHDGNFEQALTI-LEMMEATGPKPNEVSYSALLNGLCRHA 357

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   ++ +LERM+  G++     YT++I G C+ G    +  L+D M K+G  P++  ++
Sbjct: 358 KFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFS 417

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G C+ G+++   E++ K ++  L  + I YT L+  + K  +  +A  ++  M + 
Sbjct: 418 VLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRI 477

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G + +      L+++ C+  K+  +E FF      G  P   T+  +I GY   GN   A
Sbjct: 478 GYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKA 537

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  M + G  P + TYG L+  LC+  K  EA +  + +     +   VT  T+  E
Sbjct: 538 FSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVE 597

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             K G    A+ + + + ++  +    T   +   L    ++  A  F+  LLGK
Sbjct: 598 TFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK 652



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 199/417 (47%), Gaps = 46/417 (11%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           +   LLI  +  +G  G   + F L   M  +G+ P+VYT  +L+  L K+     A  L
Sbjct: 99  SVFDLLIRVYLREGMVGDALETFRL---MGIRGFNPSVYTCNMLLGKLVKERKV-GAVWL 154

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F K + +    P+V T+  +I+  C E K+ +A  LL++M+E G +P+  TY +++  +C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G ++ A +L+D MG +G   +   YN ++D LCK  R  + Y LLKK  +R +  ++I
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 439 TYTILLSEHLKQAET-----------------------------------KQALGLFCRM 463
           TY  +++  +K+ +                                    +QAL +   M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              G  P+  +Y+ L+   CR  K + S+   +     G+      YT+MI G  R+G +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           + +VK   +M + G  PD +T+  LI+G C+  K+    +    M   G++P  +   TL
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 584 AYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            Y YCK GD   A  +  ++     D   +I   N L+  LC + +VG+A  FFH +
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFI--CNVLVSSLCKDGKVGVAEYFFHHM 509



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 201/416 (48%), Gaps = 4/416 (0%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            ST N ++ + C  G ++ A  +  +M   G      +Y  ++  YC+ GR   A   + 
Sbjct: 168 VSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELID 227

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M  +G   D  T  +L+   C K  R +  + + LL++M ++   PN  T+  +I+G  
Sbjct: 228 QMGSKGIEADACTYNMLVDDLC-KNNRSA--KGYLLLKKMRKRMISPNEITYNSIINGFV 284

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G    A R+F ++    N  PN  TY A+I G+C +    +A  +LE M+  G  PN 
Sbjct: 285 KEGKIGAATRIFQEMSML-NLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNE 343

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y++L+ G C+   FE +  +++ M   G      AY A+IDGLC+ G + E+ +LL K
Sbjct: 344 VSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDK 403

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +  +  D +T+++L++   +  + K    + C+M KAGL P+   YTTLI  +C+   
Sbjct: 404 MLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGD 463

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K +      G          ++    +DG +  A  +F  M++IG  P++IT+  
Sbjct: 464 VVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDC 523

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +I+G        +A   ++ MI  G  P   T   L    C+ G    A  +L+ L
Sbjct: 524 IINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 209/448 (46%), Gaps = 5/448 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R  +G+ ++ +M    +     T N ++    + G +  A  +F EM    
Sbjct: 244 LVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLN 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  +C  G   +A   L  M   G   +  + + L+   C        +
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCR---HAKFE 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +  +LE M   G       +T +IDGLC+ G   ++ +L  K+++ D   P+V T++ +
Sbjct: 361 LSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK-DGVVPDVVTFSVL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C+  K+   + ++ +M + GL PN+  YT+LIY +CK G+   A+ +   M + G 
Sbjct: 420 INGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N +  N ++  LCK G+V  A        +     + IT+  +++ +       +A  
Sbjct: 480 DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M+KAG +P    Y  L+ A CR  K KE+++   +           TY +++    
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETF 599

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG-ISPCE 577
           + G ++ AV  F  M Q    PD+ TY  + +GL ++ K+  A  FY +++GKG +SP +
Sbjct: 600 KSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEK 659

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK 605
           V   T      + G S  A+   E ++K
Sbjct: 660 VMYTTFVDGLFRAGQSKAALYFCEDMEK 687



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 206/469 (43%), Gaps = 41/469 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G++     +  EM+   L     T N ++   C  G  E A  + + M A G
Sbjct: 279 IINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATG 338

Query: 219 VCADASSYKLMV----------------------------VAY-------CRMGRVTEAD 243
              +  SY  ++                            +AY       CR G + E+ 
Sbjct: 339 PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           + L  ML  G + D  T ++LI  FC     G IK   E++ +M + G  PN   +T LI
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRV---GKIKNVKEIICKMYKAGLAPNSIIYTTLI 455

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
              CK G   +AF++++ + R   Y  N      ++S  CK+ K+  AE     M + G 
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRI-GYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +PN+ T+  +I G+   GN  +A+ + D M K G  P+ + Y  ++  LC+ G+ +EA  
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKR 574

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL K        D +TY  +L E  K      A+ LF  MV+  + PD + Y  + A   
Sbjct: 575 LLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634

Query: 484 RQKKMKESEKFFQEAITAG-LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           R+ KM  +  F+   +  G + P K  YT+ + G  R G   +A+ + + M + G   D 
Sbjct: 635 RRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADL 694

Query: 543 ITYGALISGLCKQSKLDEACQFYESMI-GKGISPCEVTRVTLAYEYCKQ 590
           I    +++G  +  K+ +A   +  M  G  ISP   T   L + Y K+
Sbjct: 695 IATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 201/469 (42%), Gaps = 44/469 (9%)

Query: 207  AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLI 265
            A  +FDEM   G      +Y  ++ A CR G+  EA R L  +    + +D  T  T+L+
Sbjct: 537  AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596

Query: 266  TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              F      G +  A  L +EMV++   P+ YT+ ++  GL ++G    A   +  L+  
Sbjct: 597  ETFKS----GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK 652

Query: 326  DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL--------------------- 364
                P    YT  + G  +  +   A    E M++ GL                      
Sbjct: 653  GAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAK 712

Query: 365  ---------------PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
                           P+  TY  L++G+ K  N  +  +L ++M + G  P+    +++I
Sbjct: 713  AGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLI 772

Query: 410  DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             G CK   +    +LLKK     +  D+ T+ +L+ ++ +  E  +A  L   M    + 
Sbjct: 773  LGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIF 832

Query: 470  PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            PD+  + ++I+   R   ++ES     E +  G  P +  Y +++    R G+I  A K 
Sbjct: 833  PDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKL 892

Query: 530  FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
               M  +G +  ++   AL+ GL K  K++EA    + M+ K + P   T  TL + +C+
Sbjct: 893  KDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCR 952

Query: 590  QGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                  A+ + +++   D KL +   N LI  LC++  V  A   + ++
Sbjct: 953  NESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEI 1001



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 39/460 (8%)

Query: 152  AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            +H     ++ +    G+ KE   ++ ++      + T T N ++    + G++  A  +F
Sbjct: 552  SHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALF 611

Query: 212  DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            DEM  R V  D+ +Y ++     R G++  A  +   +L +GA+   +   ++ T F D 
Sbjct: 612  DEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAV---SPEKVMYTTFVDG 668

Query: 272  GFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
             FR G  K A    E+M + G   ++    V+++G  + G   KA  +F  +       P
Sbjct: 669  LFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISP 728

Query: 331  NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE------ 384
            ++ TY  ++ GY K++ +++   L   M   G+ P+  T  SLI G CK    +      
Sbjct: 729  SLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLL 788

Query: 385  -----------------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
                                         +A+DL+++M      P++  +++II  L + 
Sbjct: 789  KKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRV 848

Query: 416  GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
              VQE++ LL +  +R    D+  Y  L++   +      A  L   M   G++    A 
Sbjct: 849  STVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAE 908

Query: 476  TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            + L+    +  K++E++      +   L PT  T+T+++  + R+ ++  A+K    M+ 
Sbjct: 909  SALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDF 968

Query: 536  IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                 D I Y  LISGLC    +  A + Y+ +  +G+ P
Sbjct: 969  CDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 7/375 (1%)

Query: 142  SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
            +L+  G       +    V      G+ K       +M  NGL       N ++     +
Sbjct: 648  NLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRM 707

Query: 202  GLVEYAEEVFDEMCARGVCADAS--SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
            G +  A ++F  M + G+    S  +Y +++  Y +   +++     + M+  G   D  
Sbjct: 708  GKMAKAGDIFTMMWS-GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKL 766

Query: 260  TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
            T   LI  FC       +    +LL++M+  G   +  T  +LI   C+     KAF L 
Sbjct: 767  TCHSLILGFCKSAM---LDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDL- 822

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            + ++   +  P++ T+ ++IS   +   +  + +LL  M E+G +P+   Y +L+   C+
Sbjct: 823  VNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCR 882

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            +G+   A+ L D M   G +    A +A++ GL K G+V+EA  +L    ++ L     T
Sbjct: 883  MGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIAT 942

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
            +T L+    +     +AL L   M    +  D+ AY  LI+  C    +  + K ++E  
Sbjct: 943  FTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIK 1002

Query: 500  TAGLFPTKETYTSMI 514
              GL+P   TY  +I
Sbjct: 1003 QRGLWPNMTTYCILI 1017



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 3/276 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   ++ +I    ++G V +A E  +    R       T  +LL + +K+ +     
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M+   + PD+  +  LI   C + K+K++    ++   +G  P+  TY +++  Y
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G   +A++   +M   G   D  TY  L+  LCK ++  +     + M  + ISP E
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           +T  ++   + K+G    A  I + +     +    T N LI   C +     A      
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           +       + VS +AL N      K+ L   + +R+
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERM 369



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 138/316 (43%), Gaps = 11/316 (3%)

Query: 209  EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
             +++ M   G+  D  +   +++ +C+   +    + L  ML  G  +D  T  +LI  +
Sbjct: 751  NLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKY 810

Query: 269  CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            C+      + +AF+L+  M      P++ TH  +I  L +    +++  L L  +     
Sbjct: 811  CETD---EVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQES-HLLLHEMLERGC 866

Query: 329  KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             P+   Y A+++  C+   ++ A  L + M+  G+       ++L+ G  K G  E A  
Sbjct: 867  IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKL 926

Query: 389  LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
            ++D M ++   P I  +  ++   C+   + EA +L       +++ D I Y +L+S   
Sbjct: 927  VLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLC 986

Query: 449  KQAETKQALGLFCRMVKAGLNPDIHAYTTLI-AAFCRQKKMKESEKFFQEAITAGLFPTK 507
               +   AL L+  + + GL P++  Y  LI A F     + + E   ++    G+    
Sbjct: 987  ADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGVI--- 1043

Query: 508  ETYTSMICGYLRDGNI 523
               +   CG +R G I
Sbjct: 1044 ---SGHWCGGIRQGLI 1056


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 209/409 (51%), Gaps = 17/409 (4%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F EM  + +  D  +Y  M+  +C  GR ++A++ L  ML+R    D  T + LI 
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           AF  +G      +A EL +EM+ +   P+  T++ +IDG CK+   + A  +F  L  + 
Sbjct: 332 AFVKEG---KFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY-LTPTK 387

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P++ T+  +I+GYC+ ++++    LL  M E GL+ NT TYT+LI+G C+VG+   A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE------------LQ 434
            DL+  M   G  PN+   N ++DGLC  G++++A E+ K A Q+             ++
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDIDASRPFNGVE 506

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D  TY IL+   + + +  +A  L+  M   G+ PD   Y+++I   C+Q ++ E+ + 
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F    +    P   T+ ++I GY + G +   ++ F  M Q G   D ITY  LI G  K
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRK 626

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
              +D A   ++ MI  G+ P  +T   +      + +   A+ +LE L
Sbjct: 627 VDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 213/436 (48%), Gaps = 20/436 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +  +M    +   T+ +N +    C  G V  A  + D M   G+  +  +Y 
Sbjct: 166 RISEALDLFHQMCKPNVVTFTTLMNGL----CREGRVVEAVALLDRMLEDGLQPNQITYG 221

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V   C+MG    A   L  M +   I+ N  +   I     K  R S   A  L  EM
Sbjct: 222 TIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHS--DAHNLFIEM 279

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
             K   P++ T+  +I+G C  G W++    L   L R  N  P+V T++A+I+ + KE 
Sbjct: 280 QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN--PDVVTFSALINAFVKEG 337

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   AE L + M  + ++P+T TY+S+I G CK    + A  +  L   +GC+P+I  +N
Sbjct: 338 KFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFN 397

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I G C+  RV +  +LL +  +  L A+ ITYT L+    +  +   A  L   M+ +
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS 457

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-----------GLFPTKETYTSMIC 515
           G+ P++    TL+   C   K+K++ + F+    +           G+ P  +TY  +IC
Sbjct: 458 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILIC 517

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G + +G    A + ++ M   G  PD ITY ++I GLCKQS+LDEA Q ++SM  K  SP
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 577

Query: 576 CEVTRVTLAYEYCKQG 591
             VT  TL   YCK G
Sbjct: 578 DVVTFNTLITGYCKAG 593



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 220/480 (45%), Gaps = 25/480 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +M+C    F    +L    S   ++T  G      T N ++   C    +  A ++F +M
Sbjct: 122 LMKC----FCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
           C   V     ++  ++   CR GRV EA   L  ML+ G   +  T   ++   C  G  
Sbjct: 178 CKPNVV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            S       +EE+      PNV  +  +IDGL K G    A  LF+++   + + P++ T
Sbjct: 234 VSALNLLRKMEEVSH--IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF-PDIVT 290

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  MI+G+C   + + AE LL+ M E+ + P+  T+++LI    K G F  A +L D M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
                P+   Y+++IDG CK+ R+  A  +      +    D IT+  L++ + +     
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
             + L   M +AGL  +   YTTLI  FC+   +  ++   QE I++G+ P   T  +++
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470

Query: 515 CGYLRDGNISSAVKYFQRMNQI-----------GCAPDNITYGALISGLCKQSKLDEACQ 563
            G   +G +  A++ F+ M +            G  PD  TY  LI GL  + K  EA +
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE 530

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
            YE M  +GI P  +T  ++    CKQ     A  + +S+  K +   + T NTLI   C
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 221/496 (44%), Gaps = 27/496 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    + +A   F ++   G      ++  ++   C   R++EA      M     +   
Sbjct: 127 CSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVV--- 183

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T L+   C +G    + +A  LL+ M+  G +PN  T+  ++DG+CK G T  A  L
Sbjct: 184 -TFTTLMNGLCREG---RVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+    +  PNV  Y  +I G  K+ + + A  L   M+E+ + P+  TY  +I G C
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G +  A  L+  M +    P++  ++A+I+   K+G+  EA EL  +   R +    +
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY+ ++    KQ     A  +F      G +PDI  + TLIA +CR K++ +  K   E 
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
             AGL     TYT++I G+ + G++++A    Q M   G  P+ +T   L+ GLC   KL
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479

Query: 559 DEACQFYESMIG-----------KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            +A + +++M              G+ P   T   L      +G    A  + E +  + 
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACYESNKY 660
            +    T +++I  LC + R+  A   F  +  K  + D V+   L      A    +  
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGL 599

Query: 661 ALFSDLSQR--IAEGI 674
            LF ++ QR  +A+ I
Sbjct: 600 ELFCEMGQRGIVADAI 615



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 13/349 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F + G+  E   +  EM    +   T T + ++   C+   ++ AE +F     +G
Sbjct: 329 LINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YCR  RV +  + L  M + G + +  T T LI  FC  G    + 
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG---DLN 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----------DNY 328
            A +LL+EM+  G  PNV T   L+DGLC  G  + A  +F  + +S          +  
Sbjct: 446 AAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGV 505

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  +I G   E K   AE L E M  +G++P+T TY+S+I G CK    + A  
Sbjct: 506 EPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + D MG +  +P++  +N +I G CK G V +  EL  +  QR + AD ITY  L+    
Sbjct: 566 MFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFR 625

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           K      AL +F  M+ +G+ PD      ++     +++++ +    ++
Sbjct: 626 KVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 166/363 (45%), Gaps = 9/363 (2%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A +L   MVR    P+V     L+  + + G  +    L  K+        N +++T
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKM-EMLRMPCNAYSFT 120

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C   K+  A     ++ + G  P   T+ +L++G C       A DL   M   
Sbjct: 121 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM--- 177

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C PN+  +  +++GLC++GRV EA  LL +  +  LQ ++ITY  ++    K  +T  A
Sbjct: 178 -CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236

Query: 457 LGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           L L  +M +   + P++  Y T+I    +  +  ++   F E     +FP   TY  MI 
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+   G  S A +  Q M +    PD +T+ ALI+   K+ K  EA + Y+ M+ + I P
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 576 CEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLWIRTVNTLIRKLCSEKRVGMAALFF 632
             VT  ++   +CKQ   D+A  M  L         I T NTLI   C  KRV       
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 633 HKL 635
           H++
Sbjct: 417 HEM 419



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 8/289 (2%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  ++   + A DL   M +    P++  +  ++  + + GR      L KK     +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           +  ++TIL+      ++   AL  F ++ K G +P +  + TL+   C + ++ E+   F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +       P   T+T+++ G  R+G +  AV    RM + G  P+ ITYG ++ G+CK 
Sbjct: 175 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 556 SKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLW--IRT 611
                A      M     I P  V   T+     K G  + A  + +E  +K+++  I T
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            N +I   C   R   A     ++L +  N D V+ +AL NA  +  K+
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKF 339



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+  E   +  EM + G+   T T + ++   C+   ++ A ++FD M ++    D  ++
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GSIKQAFELL 284
             ++  YC+ G V +       M  RG + D  T   LI      GFR   +I  A ++ 
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI-----YGFRKVDNIDGALDIF 637

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
           +EM+  G  P+  T   ++ GL  K   E+A  +   L  S  Y+
Sbjct: 638 QEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVGYQ 682


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 230/455 (50%), Gaps = 43/455 (9%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            +++  ++ G  ++   ++ EM   GL +   T N ++      G++  A  + +EM  +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G     ++Y   +   C++GR+++A + LS ML    + D  +   LI  +C     G++
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR---LGNL 390

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AF L +E+      P + T+  L+DGLC++G  E A +L ++++ ++   P++ TYT 
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI-NEGIAPDIVTYTI 449

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G CK   ++ A+   + M  +GL  ++  Y + I G  K+G+  RA+ L + M  +G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  YN ++DGLCK G ++EA ELL+                               
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQ------------------------------- 538

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
               +MV  G+ PD   YT++I A     ++++  + F E ++ GL P+  TYT +I G+
Sbjct: 539 ----KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G +  A  YF  M + G  P+ ITY +LI+GLCK  ++D+A  F+  M+ KGI P +
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            +   L  E C  G+   A+    SL K++  R V
Sbjct: 655 YSYTILINENCNMGNWQEAL----SLYKQMLDRGV 685



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 259/558 (46%), Gaps = 11/558 (1%)

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
           YW +      +  R+  V     +S+   E + +++  ++  +++   +++  S+  +M 
Sbjct: 135 YWVMERVINANMHRIVDVLIGGCVSS---EVSVKILDLLIWVYSKKSMVEQCLSVFDKMI 191

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
            + L       NR++ I  +  L+  A EV+  M   G+     +Y  ++ +YC+ G+V 
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +    LS M  RG   ++ T  +LI     KG     +QA  L+ EM++ G K + YT+ 
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG---EFEQAKGLIGEMLKTGLKVSAYTYN 308

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI G   KG   +A  L  ++V      P V TY + I G CK  +M+ A   L  M  
Sbjct: 309 PLIYGYFNKGMLAEALSLQEEMVLK-GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLA 367

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             LLP+  +Y +LIYG+C++GN  +A+ L D +      P I  YN ++DGLC++G ++ 
Sbjct: 368 NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +     +  D +TYTIL++   K      A   F  M+  GL  D +AY T I 
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              +      +    +E +  G  P    Y  ++ G  + GN+  A +  Q+M   G  P
Sbjct: 488 GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D +TY ++I    +  +L +  + +  M+ KG++P  VT   L + +  +G    A I  
Sbjct: 548 DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYF 607

Query: 601 ESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE 656
             + +K  +  V   N+LI  LC  +R+  A  FF +++ K    ++ S   L N  C  
Sbjct: 608 SEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667

Query: 657 SNKYALFSDLSQRIAEGI 674
            N     S   Q +  G+
Sbjct: 668 GNWQEALSLYKQMLDRGV 685



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 175/331 (52%), Gaps = 4/331 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +  +G L + F +  E+ +  L     T N ++   C  G +E A+++  EM   G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y ++V   C+MG ++ A  +   ML  G  LD+      I         G   
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK---LGDTS 496

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L EEM+ KG+ P++  + V++DGLCK G  E+A  L  K+V SD   P+  TYT++
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV-SDGVIPDYVTYTSI 555

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  + +  ++ +   +   M  +GL P+  TYT LI+GH   G  ERA+     M ++G 
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN++I+GLCK  R+ +AY    +  ++ +  +K +YTIL++E+      ++AL 
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           L+ +M+  G+ PD   ++ L+    +  K++
Sbjct: 676 LYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 221/481 (45%), Gaps = 36/481 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V Q ++ + ++  ++ E   ++ EM   G      T N V+   C++  +  A ++ D M
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWL---------------------------- 246
             RG   D  +Y  ++   CR+G++ EA + L                            
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQ 374

Query: 247 ----SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                 M++ G   D  T  +L+   C +G   S+  A +L+ EM R+G +PNV T+ +L
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEG---SLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ++GLCK G  E+A  L L  + +     N   Y  +I   C++EK++ A  LL  M  +G
Sbjct: 432 VNGLCKAGLLEEA-GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY SLIYG CKV   + A+ L   M  +G   N   YN +I  L ++G  Q+A 
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L+     R    DKITY  L+    K    ++ L L+ +M+  GL  D  +   +I   
Sbjct: 551 TLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGL 610

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+  K+  + +F ++AI  G  P   TY S++ G  + G I  A+  F R+   G  PD 
Sbjct: 611 CKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY   IS  CK+  +++AC F+   I  G  P  +T   L Y   KQ +      +L+ 
Sbjct: 671 FTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDE 730

Query: 603 L 603
           L
Sbjct: 731 L 731



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 201/466 (43%), Gaps = 39/466 (8%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A  VF +M ++GV     ++ +++ A C    V  A   L  M   G + ++     L
Sbjct: 200 QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTL 259

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I A   K     + +A +LLEEM   G  P+V T   +I GLCK      A +L  +++ 
Sbjct: 260 IHALSQK---NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLL 316

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLL----------------------------- 355
              Y P+  TY  ++ G C+  K+N A  +L                             
Sbjct: 317 RGFY-PDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQS 375

Query: 356 ---ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
              E M   G  P+  TY  L++G CK G+   A DL++ M + GC PN+  Y  +++GL
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK G ++EA  +L +   R L  + + Y  L+    ++ +   AL L   M   G  PD+
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y +LI   C+  ++ E+ + F   +  G      TY ++I   LR G    A+     
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC  D ITY  LI   CK   +++  + YE MI  G+    ++   +    CK G 
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 593 SATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
              A   L     + +   I T N+++  LC   R+  A   F +L
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 205/452 (45%), Gaps = 16/452 (3%)

Query: 209 EVFDEMCA-RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E+F+ +   +G C     Y + +     +G+    D+ L  M + G +   +   +++  
Sbjct: 97  EIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKH 156

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
           +   G  G   QA  LL +M R  +  +P   ++ ++++ L      + A  +F  ++ S
Sbjct: 157 Y---GKAGQPGQAIRLLLDM-RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDML-S 211

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               P V T+  ++   C   +++ A  LL  M + G +PN+  Y +LI+   +      
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L++ M   GC P++  +N +I GLCK  ++ +A +L+ +   R    D +TY  LL 
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLF 504
              +  +  +A  +  ++      P+     TLI  +    ++KE++ F  E  I  G  
Sbjct: 332 GLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY  ++ G  ++G++S A      M++ GC P+ ITY  L++GLCK   L+EA   
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCS 621
              M  +G++   V    L    C++     A+ +L  +  K     + T N+LI  LC 
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             R+  A   FH +L      + V+   L +A
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 257/554 (46%), Gaps = 49/554 (8%)

Query: 126 FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM--VIEMTNNG 183
            A+ R F  + +V     +   +  R  E M  ++ ++++ G +++   +   +  T   
Sbjct: 104 LARSRVFSEMEVVLENMRVEEMSPTR--EAMSIVIQAYSDSGLVEKALELYYFVLKTYTY 161

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMC----ARGVCADASSYKLMVVAYCRMGRV 239
            P + +  N ++ +  +LG +E A +++DEM     A   C D  S  +MV   C+ G++
Sbjct: 162 FPDVIAC-NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKL 220

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            E  + +     +G I +      LI  +C KG    ++ A  L  E+  KG+ P V T+
Sbjct: 221 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKG---DMEMANGLFIELKLKGFLPTVETY 277

Query: 300 TVLIDGLCKKGWTEKAFRLFLKL------VRSDNY------------------------- 328
             +I+G CKKG  +   RL +++      V    Y                         
Sbjct: 278 GAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIE 337

Query: 329 ---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              KP++ TY  +ISG C++ K++ A+ LLE+   +GL+PN  +YT LI+ +CK G ++R
Sbjct: 338 CGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDR 397

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A + +  M + G  P++  Y A++ GL   G V  A  + +K  +R +  D   Y IL+S
Sbjct: 398 ASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMS 457

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K+ +   A  L   M+   + PD   Y TL+  F R   + E+ K F+  I  G+ P
Sbjct: 458 GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP 517

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               Y +MI GY + G +  A+    RM +   APD  TY  +I G  KQ  LD A + +
Sbjct: 518 GIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMF 577

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSE 622
             M+     P  VT  +L   +C++GD   ++ I   +     +  V T   LI   C E
Sbjct: 578 REMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKE 637

Query: 623 KRVGMAALFFHKLL 636
            ++  AA FF ++L
Sbjct: 638 AKLIDAASFFEEML 651



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 21/488 (4%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++ F + G  K    +++EM + GL +     N ++    + G +  A E  + 
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D  +Y  ++   CR G+V+EAD+ L   L +G + +  + T LI A+C +G 
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG- 393

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +A   L EM  +G KP++ T+  L+ GL   G  + A  +  K++    + P+  
Sbjct: 394 --GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF-PDAG 450

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK+ K+  A++LL  M +Q +LP+   Y +L+ G  + GN + A  L +L 
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P I  YNA+I G CK G +++A   + +  +R L  D+ TY+ ++  ++KQ + 
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A  +F  MVK    P++  YT+LI  FCR+  +  S K F+E    GL P   TY+ +
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK--------------QSKLD 559
           I  + ++  +  A  +F+ M    C P+++T+  L++G  K              ++K  
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQS 690

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
               F+  MI  G +P      ++    C+ G   TA+ +   +  K  I    +   L+
Sbjct: 691 MFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALL 750

Query: 617 RKLCSEKR 624
             +C E R
Sbjct: 751 HGVCLEGR 758



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 55/308 (17%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A ++F+    +G+      Y  M+  YC+ G + +A   ++ M  R    D  T 
Sbjct: 498 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           + +I  +  +     +  A ++  EMV+   KPNV T+T LI+G C+KG   ++ ++F +
Sbjct: 558 STVIDGYVKQH---DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKM--------------------------------- 348
           + ++    PNV TY+ +I  +CKE K+                                 
Sbjct: 615 M-QACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673

Query: 349 -------------NRAEMLLE---RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
                        N+  M L    RM   G  P +  Y S++   C+ G F  A  L + 
Sbjct: 674 TRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNK 733

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK-KAFQRELQADKITYTILLSEHLKQA 451
           M  +GC P+  ++ A++ G+C +GR +E   ++     +RELQ   + Y+ +L ++L Q 
Sbjct: 734 MTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQI-AVNYSSILDQYLPQG 792

Query: 452 ETKQALGL 459
            ++ ++ L
Sbjct: 793 TSEASVIL 800



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 38/348 (10%)

Query: 312 TEKAFRLFLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            E   + F  + R     P N   Y++++    +    +  E++LE M+ + + P     
Sbjct: 73  VELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM 132

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCT-PNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +I  +   G  E+A +L   + K     P++ A N++++ L K GR++ A +L  +  
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML 192

Query: 430 QRELQADK----ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           + +   D+     +  I++    K+ + ++   L       G  P+I  Y TLI  +C++
Sbjct: 193 EIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKK 252

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             M+ +   F E    G  PT ETY ++I G+ + G+  +  +    MN  G   +   Y
Sbjct: 253 GDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 312

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             +I    K   + +A +  E MI  G  P                              
Sbjct: 313 NTIIDARYKHGHIVKAVETIEGMIECGCKPD----------------------------- 343

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              I T NTLI   C + +V  A     + LGK    ++ S   L +A
Sbjct: 344 ---IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 205/408 (50%), Gaps = 6/408 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G  C+ G +E A ++  EM  RG   D  ++  +V A C  G ++ A ++    
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++     D+    +L+   C       + +A +++EEM  +G  P+V T+  LIDGLCK 
Sbjct: 167 VECAP--DSVLFNILVHGLCKAN---QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              E+A +L   +V+    +PN+ TY  +I GYCK      A  L+ERM + G  P+  T
Sbjct: 222 YRMEEARQLLETMVKR-KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + SLI G C+    ++A +++ LM K  C PN+  YN +I GLC  GR  EA ELL +  
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R +  D ITY  L+    +  + +QA  +   MV+ G+ PD  +Y TL  A  + ++  
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+         AG  P   T+ S++ G      +  A      M ++GC P   TY  L+
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           +GLCK  ++D+A +    M+ +GI P   +  T+ +   ++G    A+
Sbjct: 461 TGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 207/426 (48%), Gaps = 8/426 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++  F + G ++  F ++ EM   G      T + +V   C  G +  A + F 
Sbjct: 105 HITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR 164

Query: 213 EMCARGVCA-DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           E      CA D+  + ++V   C+  +++EA + +  M +RG + D  T   LI   C K
Sbjct: 165 ESVE---CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC-K 220

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
            +R  +++A +LLE MV++  +PN+ T+  LI G CK G T  A +L  ++++S  + P+
Sbjct: 221 SYR--MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH-PD 277

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T+ ++ISG+C++ K+++A  +L  MK+    PN  TY  LI G C  G    A +L+ 
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  P+I  YN++I   C+  ++++A+++     +R +  D I+Y  L    LK  
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  L   M  AG  P++  + +L+   C  +++ E+          G  P   TY 
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYE 457

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++ G  + G +  A +    M   G  P   + G ++  L ++ K D A  +++ ++  
Sbjct: 458 VLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAA 517

Query: 572 GISPCE 577
               C+
Sbjct: 518 ESKACD 523



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 195/389 (50%), Gaps = 10/389 (2%)

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL-EEMVRKGWKPNVYTHTVL 302
           RW++      +I +N T   L+     K  R    QA+++  +E++ +    N  T+  L
Sbjct: 55  RWVTRSHRGESIHNNFTCNCLLRTLV-KARRH--HQAYQIFRDELLGQHCDTNHITYNTL 111

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G CK G  E+AF+L  ++ +   + P+V T+++++   C    ++RA        E  
Sbjct: 112 IGGFCKAGDMERAFQLLAEM-KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA 170

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P++  +  L++G CK      A  +++ M + G  P++  YN++IDGLCK  R++EA 
Sbjct: 171 --PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +LL+   +R+++ + +TY  L+  + K   T  A  L  RM+++G +PD+  + +LI+ F
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C++ K+ ++ +           P   TY  +I G    G  + A +    M+  G  PD 
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI 348

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           ITY +LI   C+  ++++A Q    M+ +G+ P  ++  TLA    K      A  +L++
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408

Query: 603 LDKKLWIR---TVNTLIRKLCSEKRVGMA 628
           +     I    T N+L+  LC  +R+  A
Sbjct: 409 MFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 148/298 (49%), Gaps = 5/298 (1%)

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  TY +LI G CK G+ ERA+ L+  M + G +P++  +++I+  LC  G +  A +  
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +++   E   D + + IL+    K  +  +A  +   M + G+ PD+  Y +LI   C+ 
Sbjct: 164 RESV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            +M+E+ +  +  +   + P   TY ++I GY + G    A +  +RM Q G  PD +T+
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +LISG C++SK+D+AC+    M     +P  VT   L    C  G +  A  +L  +D 
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
           +     I T N+LI   C   ++  A    + ++ +    D +S   L  A  +S ++
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 6/271 (2%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA-DASSYKLMVVAY 233
           ++  M  +G      T N ++   C+   ++ A EV   M  +G+CA +  +Y +++   
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM-KKGLCAPNLVTYNVLISGL 323

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C  GR  EA   LS M  RG + D  T   LI  FC + F+  I+QAF++   MV +G  
Sbjct: 324 CDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC-RNFQ--IEQAFQIQNLMVERGVI 380

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+  ++  L   L K    ++AF L   +  +    PN+ T+ +++ G C   +++ A  
Sbjct: 381 PDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI-PNLFTFNSLMEGLCCSRRLDEARH 439

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL  M+  G  P  +TY  L+ G CK G  + A +++ +M  EG  P + +   I+  L 
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILL 444
           ++G+   A     +    E +A   +Y  LL
Sbjct: 500 REGKQDLALHYFDQVVAAESKACDPSYQKLL 530


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 277/584 (47%), Gaps = 37/584 (6%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS 118
             LV+ VC ++         L     RL     + SL   Q   V A L  ++   +AL 
Sbjct: 70  HPLVREVCRLIERRSAWNAKLEGDLRRL-----LRSLKPRQ---VCAVLQLQSDERIALD 121

Query: 119 FFYWAIGFAKFRH-----FMRLYIVCATSLISNG----------NFERAHEVMQCMVSSF 163
           FFYWA    ++RH     +M L ++  T L                 R  E    ++ S+
Sbjct: 122 FFYWAGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSY 181

Query: 164 AEIGRLKEGFSMVIEMTNNGLP---LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
           +  G+L+    ++  M   G+    LI +T   V+ +A +L   E A    + M   G+ 
Sbjct: 182 SRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKL---EKALRFLERMQLVGIT 238

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQ 279
            +  +Y  ++  YC + +V  A   ++ M  +G   D  +   ++   C DK     IK+
Sbjct: 239 PNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDK----RIKE 294

Query: 280 AFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              L+E+MV+     P+  T+  L+  L K G  ++A   FL+      ++ +   Y+A+
Sbjct: 295 VRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALE-FLRETEERGFQVDKVGYSAI 353

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++ +C + +M+RA+ ++  M  +G  P+  TYT+++ G CKVG  E A  ++  M K GC
Sbjct: 354 VNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGC 413

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN  +Y A+++GLC+ G   EA E++  + +     + ITY++++    ++ +  +A  
Sbjct: 414 KPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACD 473

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+  G  P       LI + C ++KM E++KF +E +  G       +T++I G+ 
Sbjct: 474 VVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFC 533

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +  NI +A+     M      PD +T+ A+I  L K+ +++EA  +   M+ KG+ P  V
Sbjct: 534 QSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPV 593

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCS 621
           T   + ++YCK G     + +L  +  +   RT  N +I KLC+
Sbjct: 594 TYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCN 637



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 182/418 (43%), Gaps = 7/418 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V   ++ G   E    + E    G  +     + +V   C  G ++ A+E+ +EM  +G
Sbjct: 318 LVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKG 377

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V   C++G+V EA + L  M   G   +  + T L+   C     G+  
Sbjct: 378 CSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQ---HGNSL 434

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E++       W PN  T++V++ GL ++G   +A  +  +++ +  + P       +
Sbjct: 435 EAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREML-TKGFFPTPVEINLL 493

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C E+KMN A+  +E    +G   N   +T++I+G C+  N + A  L+D M     
Sbjct: 494 IKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNK 553

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   + AIID L KKGR++EA     K  ++ L    +TY  ++ ++ K    ++ + 
Sbjct: 554 HPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIK 613

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+         AY  +I   C     + ++K     +         T   ++  YL
Sbjct: 614 LLGKMLSRSKCRT--AYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYL 671

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG-ISP 575
             G   SA K   RM      PD      L   L  + KL+EA       + +G ISP
Sbjct: 672 SKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISP 729



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 4/228 (1%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           Q   + D I Y ++L    K    + A  +   MV+ G+     A+  ++ ++ R  K++
Sbjct: 129 QWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLR 188

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +       AG+ P      + I   +    +  A+++ +RM  +G  P+ +TY  LI
Sbjct: 189 NAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLI 248

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL--DKKL 607
            G C   +++ A +    M  KG  P +V+  T+    C+         ++E +  D KL
Sbjct: 249 KGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKL 308

Query: 608 WIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +   V  NTL+  L        A  F  +   +   VD+V  +A+ N+
Sbjct: 309 FPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNS 356


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 15/438 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GRL E      +M           +N ++   C+ G ++ A  +F     RG
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF-----RG 63

Query: 219 VCADAS--SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRG 275
           +    S  +  +++  +C +  + +A      M    A++  AT  T +I  +C      
Sbjct: 64  IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD--- 120

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + QA +LLEE        +V   T +  G CK    ++A++L L +V   + KP++  +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I G+CK  ++  A  +LE +   G +PN  TYT+LI G CK GN   A  L  ++  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 396 EG--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                 PN+  +NA+I GLCK  R++ A+EL+K+   R+L+AD  TYT L+    KQ  T
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +   +F  M++ G NP +  YTTL+ A C+   ++++++  +  +  G+ P   TYT +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G   +G + +A ++F+++ +  C P  + Y AL+ G CK + +DEA ++Y  M+ + +
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 574 SPCEVTRVTLAYEYCKQG 591
           +P   T   L    CK+G
Sbjct: 419 APDPATCKLLVEMLCKRG 436



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 192/402 (47%), Gaps = 27/402 (6%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++   C+ GR+ EA    + ML+R  + +   + LL+ + C  G    + QA  + 
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAG---KMDQAMAIF 61

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             +      P+V T  +LI+G C+    +KA  LF ++ ++    P   TYTA+I  YCK
Sbjct: 62  RGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCK 118

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIY 403
            +++++A  LLE  +      +    TS+  G CK    + AY L+ D++ K+   P+I 
Sbjct: 119 MDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV 176

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           A+N II G CK GRV+EAYE+L+         + +TYT L+    K     +AL LF  +
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236

Query: 464 VKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
                   P++  +  LI+  C+  +++ + +  ++     L     TYT+++ G  + G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             S   + F+ M + GC P  +TY  L+   CK   L +A Q   SM+ KGI P      
Sbjct: 297 RTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP------ 350

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
                     D  T  ++LE L +   +RT      K+  E+
Sbjct: 351 ----------DVTTYTVLLEGLFENGKVRTATEFFEKILRER 382



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 186/374 (49%), Gaps = 10/374 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           TLN ++   CEL L++ A E+F EM     +  +A++Y  ++  YC+M R+ +A + L  
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTHTVLIDGLC 307
                   D   +T +   FC K  R  + +A++LL +MV +K  KP++    V+I G C
Sbjct: 132 --SSCCSSDVIAITSVARGFC-KAQR--VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM--KEQGLLP 365
           K G   +A+ +   LV S    PN  TYT +I G+CK   ++ A  L + +  ++    P
Sbjct: 187 KAGRVREAYEMLETLV-SMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEP 245

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  T+ +LI G CK    E A++L+  M       + + Y  ++DGLCK+GR  E   + 
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVF 305

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  +       +TYT L+  H K    + A  +   MV  G+ PD+  YT L+      
Sbjct: 306 EEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFEN 365

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K++ + +FF++ +     P    Y++++ G  +   +  AVKY+  M     APD  T 
Sbjct: 366 GKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 546 GALISGLCKQSKLD 559
             L+  LCK+ + D
Sbjct: 426 KLLVEMLCKRGRTD 439



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 180/399 (45%), Gaps = 40/399 (10%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLF-------------------------------LKL 322
           PN +T +VLI GLCK G   +A   +                               + +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            R     P+V T   +I+G+C+ + +++A E+  E  K   L+P   TYT++I  +CK+ 
Sbjct: 61  FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITY 440
             ++A  L++      C+ ++ A  ++  G CK  RV EAY+LL    +++  + D + +
Sbjct: 121 RLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            +++    K    ++A  +   +V  G  P+   YTTLI  FC+   + E+ + F+   +
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 501 AGLF--PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ ++I G  +   +  A +  ++M       D  TY  L+ GLCKQ + 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
            E  + +E M+ +G +P  VT  TL + +CK G    A  ++ S+  K     + T   L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           +  L    +V  A  FF K+L +      V  +AL   C
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 47/383 (12%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  T++ +I+G CK  ++  A     +M E+  +PN      L+   C+ G  ++A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQA--- 57

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL---LKKAFQRELQADKITYTILLSE 446
           M +     C+P++   N +I+G C+   + +A EL   ++K F   L  +  TYT ++  
Sbjct: 58  MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFA--LVPEATTYTAIIKC 115

Query: 447 HLKQAETKQALGL--------------------FCR-------------MV-KAGLNPDI 472
           + K     QA  L                    FC+             MV K    PDI
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            A+  +I  FC+  +++E+ +  +  ++ G  P   TYT++I G+ + GN+S A++ F+ 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 533 MNQIG--CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++       P+ +T+ ALISGLCK  +L+ A +  + M  + +     T  TL    CKQ
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 591 GDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           G ++    + E + ++     + T  TL+   C    +  A      ++ K    D  + 
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 648 AALKNACYESNKYALFSDLSQRI 670
             L    +E+ K    ++  ++I
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 236/485 (48%), Gaps = 16/485 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + Q ++ S ++  R+ E   ++ EM   G      T N V+   C+   +  A ++ + M
Sbjct: 248 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 307

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   D  +Y  ++   C++GRV  A      +    +++ N  +   +T        
Sbjct: 308 LIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVT-------H 360

Query: 275 GSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G +  A  +L +MV   G  P+V T+  LI G  KKG    A  + L+ +R+   KPNV+
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV-LRDMRNKGCKPNVY 419

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +YT ++ G+CK  K++ A  LL  M   GL PNT  +  LI   CK      A ++   M
Sbjct: 420 SYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 479

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++GC P++Y +N++I GLC+   ++ A  LL+      + A+ +TY  L++  L++ E 
Sbjct: 480 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K+A  L   MV  G   D   Y +LI   CR  ++ ++   F++ +  GL P+  +   +
Sbjct: 540 KEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNIL 599

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G  R G +  AV++ + M   G  PD +T+ +LI+GLC+  ++++    +  +  +GI
Sbjct: 600 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 659

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILES-------LDKKLWIRTVNTLIRKLCSEKRVG 626
            P  VT  TL    CK G    A ++L+         + + W   + +L+ +   ++R  
Sbjct: 660 PPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTF 719

Query: 627 MAALF 631
             A+F
Sbjct: 720 YNAVF 724



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 155/594 (26%), Positives = 261/594 (43%), Gaps = 71/594 (11%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV--------SSFAEIG 167
           ++  F W      +RH   +Y V    L SNG F+    ++  M         S F  I 
Sbjct: 88  SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147

Query: 168 R--LKEGFS-----MVIEMTN------------------------------------NGL 184
           R   K GF      +++EM N                                      +
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P    T   V+   C +  V+ A  V  +M   G   ++  Y+ ++ +  +  RV EA +
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M   G + D  T   +I   C       I +A +++  M+ +G+ P+  T+  L++
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCK---FDRINEAAKMVNRMLIRGFTPDDITYGYLMN 324

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM-KEQGL 363
           GLCK G  + A  LF ++      KP    +  +I G+    +++ A+ +L  M    G+
Sbjct: 325 GLCKIGRVDAAKDLFYRIP-----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 379

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P+  TY SLIYG+ K G    A +++  M  +GC PN+Y+Y  ++DG CK G++ EAY 
Sbjct: 380 VPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 439

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL +     L+ + + +  L+S   K+    +A+ +F  M + G  PD++ + +LI+  C
Sbjct: 440 LLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              ++K +    ++ I+ G+     TY ++I  +LR G I  A K    M   G   D I
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI 559

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY +LI GLC+  ++D+A   +E M+  G+ P  ++   L    C+ G    A+      
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV----EF 615

Query: 604 DKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            K++ +R       T N+LI  LC   R+      F KL  +    D V+   L
Sbjct: 616 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 228/479 (47%), Gaps = 10/479 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +  +    S++ +MT +G    +     ++    +   V  A ++ +EM   G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA ++  +++  C+  R+ EA + ++ ML RG   D+ T   L+   C  G   + K
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK 336

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F  +        KP       LI G    G  + A  +   +V S    P+V TY ++
Sbjct: 337 DLFYRIP-------KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 389

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K+  +  A  +L  M+ +G  PN  +YT L+ G CK+G  + AY+L++ M  +G 
Sbjct: 390 IYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGL 449

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +N +I   CK+ R+ EA E+ ++  ++  + D  T+  L+S   +  E K AL 
Sbjct: 450 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 509

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+  G+  +   Y TLI AF R+ ++KE+ K   E +  G    + TY S+I G  
Sbjct: 510 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLC 569

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F++M + G  P +I+   LI+GLC+   ++EA +F + M+ +G +P  V
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629

Query: 579 TRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           T  +L    C+ G   D  T    L++        T NTL+  LC    V  A L   +
Sbjct: 630 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE 688


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 233/493 (47%), Gaps = 47/493 (9%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           G P      N ++         + A +V+  M + GV  DA ++ + + ++C  GR   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 243 DRWLSAMLDRGAIL-----------------------------------DNATLTLLITA 267
            R L ++ +RG  +                                   D AT   ++ A
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C KG    I ++  LL +++++G   N +T  + I GLC+ G  E+A  L   +   D 
Sbjct: 125 LCQKG---DIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM---DA 178

Query: 328 Y-KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           Y  P+V TY  ++ G CK+ K+  A   L RM  QG +P+  TY ++I G+CK    + A
Sbjct: 179 YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L+     +G  P+   Y ++I+GLC +G V+ A EL  +A  ++L+ D + Y  L+  
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +Q     AL +   MV+ G +PDI  Y  +I   C+   + ++     +AI  G  P 
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +MI GY +   + SA++  +RM   G APD ITY ++++GLCK  K  E  + +E
Sbjct: 359 VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFE 418

Query: 567 SMIGKGISPCEVTRVTLAYEYCK--QGDSATAMIILESLDKKLWIRTV--NTLIRKLCSE 622
            MI KG  P  +T   L   +CK  Q + A+ +I+  S D  L   T+  NTLI   C  
Sbjct: 419 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQD-GLVPDTISFNTLIHGFCRN 477

Query: 623 KRVGMAALFFHKL 635
             +  A L F KL
Sbjct: 478 GDLDGAYLLFQKL 490



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 235/471 (49%), Gaps = 9/471 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +FDEM  R V  D +++  ++ A C+ G + E+   L+ +L RG  ++  T  + I 
Sbjct: 99  ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C+ G    +++A  L+E M      P+V T+  L+ GLCK    ++A + +L+ + + 
Sbjct: 159 GLCEGG---RLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQ-YLRRMMNQ 213

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  TY  +I GYCK + +  A  LL+    +G +P+  TY SLI G C  G+ ERA
Sbjct: 214 GCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERA 273

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L +    +   P++  YN+++ GLC++G +  A +++ +  +     D  TY I+++ 
Sbjct: 274 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K      A  +    +  G  PD+  + T+I  +C++ K+  + +  +     G+ P 
Sbjct: 334 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPD 393

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY S++ G  + G      + F+ M   GC P+ ITY  LI   CK ++L+EA     
Sbjct: 394 AITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 453

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEK 623
            M   G+ P  ++  TL + +C+ GD   A ++ + LD+K +  T +T   LI    S+ 
Sbjct: 454 RMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKL 513

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKN-ACYESNKYALFSDLSQRIAEG 673
            + MA   F +++ K    D  +   L + +C  +N    +  L++ +++G
Sbjct: 514 NMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 204/420 (48%), Gaps = 5/420 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E GRL+E  ++V  M     P +  T N ++   C+   V+ A +    M  +G 
Sbjct: 157 IRGLCEGGRLEEAVALVESMDAYIAPDVV-TYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++  YC+   + EA   L   + +G + D  T   LI   C +G    +++
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEG---DVER 272

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A EL  E   K  KP++  +  L+ GLC++G    A ++  ++V  D   P++ TY  +I
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE-DGCHPDIWTYNIVI 331

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK   ++ A +++     +G LP+  T+ ++I G+CK    + A  L++ M   G  
Sbjct: 332 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA 391

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+   YN++++GLCK G+ +E  E  ++   +  + + ITY IL+    K  + ++A G+
Sbjct: 392 PDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 451

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             RM + GL PD  ++ TLI  FCR   +  +   FQ+    G   T +T+  +I  Y  
Sbjct: 452 IVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 511

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             N+  A K F  M   G  PD  TY  L+ G CK + +D A      M+ KG  P   T
Sbjct: 512 KLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMAT 571



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 241/481 (50%), Gaps = 8/481 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G + E  +++ ++   G+ +   T N  +   CE G +E A  + + M A  
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C+  +V EA ++L  M+++G I D+ T   +I  +C    R  ++
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK---RDMLQ 236

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL++ + KG+ P+  T+  LI+GLC +G  E+A  LF +  ++ + KP++  Y ++
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE-AQAKDLKPDLVVYNSL 295

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C++  +  A  ++  M E G  P+  TY  +I G CK+GN   A  +M+    +G 
Sbjct: 296 VKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY 355

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ +N +IDG CK+ ++  A +L+++ +   +  D ITY  +L+   K  + K+   
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M+  G  P+   Y  LI  FC+  +++E+          GL P   ++ ++I G+ 
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+G++  A   FQ++++ G +    T+  LI     +  +  A + +  MI KG  P   
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS---EKRVGMAALFFHKL 635
           T   L    CK  +   A + L  +  K ++ ++ T  R L S     RV  A    H +
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595

Query: 636 L 636
           +
Sbjct: 596 V 596



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 164/353 (46%), Gaps = 9/353 (2%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  P    +  ++D L    + ++A +++++++ S    P+  T+T  I  +C   + + 
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRML-SAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  LL  + E+G       Y +++ G    G+   A  L D M +    P++  +N ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LC+KG + E+  LL K  +R +  +K T  I +    +    ++A+ L   M  A + P
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAP 182

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  Y TL+   C+  K++E+ ++ +  +  G  P   TY ++I GY +   +  A +  
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           +     G  PD +TY +LI+GLC +  ++ A + +     K + P  V   +L    C+Q
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 591 GDSATAMIILESL-----DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           G    A+ ++  +        +W  T N +I  LC    +  AA+  +  + K
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIW--TYNIVINGLCKMGNISDAAVVMNDAIVK 353



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 168/386 (43%), Gaps = 25/386 (6%)

Query: 141 TSLISNGNFERAHE---------------VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
             L + G+ ERA E               V   +V      G +     ++ EM  +G  
Sbjct: 262 NGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH 321

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T N V+   C++G +  A  V ++   +G   D  ++  M+  YC+  ++  A + 
Sbjct: 322 PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQL 381

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           +  M   G   D  T   ++   C     G  K+  E  EEM+ KG +PN  T+ +LI+ 
Sbjct: 382 VERMWMYGIAPDAITYNSVLNGLCKA---GKAKEVNETFEEMILKGCRPNAITYNILIEN 438

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            CK    E+A  + +++   D   P+  ++  +I G+C+   ++ A +L +++ E+G   
Sbjct: 439 FCKINQLEEASGVIVRM-SQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA 497

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
             +T+  LI  +    N + A  +   M  +G  P++Y Y  ++DG CK   V  AY  L
Sbjct: 498 TADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHL 557

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +   +       T+  +L+         +A+ +   MV+ G+ P++    T+++    +
Sbjct: 558 AEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV--VDTILST--DK 613

Query: 486 KKMKESEKFFQEAITAG--LFPTKET 509
           K++   +   +E +  G   +PT E 
Sbjct: 614 KEIAAPKILVEELMKKGHISYPTYEV 639



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 120/299 (40%), Gaps = 42/299 (14%)

Query: 390 MDLMGKEGCTPNIYAYNAIIDGL-----------------------------------CK 414
           MDL G   C P   AYNAI+D L                                   C 
Sbjct: 1   MDLFG---CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCI 57

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            GR   A  LL+   +R      + Y  ++           A  LF  M++  + PD+  
Sbjct: 58  TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  ++ A C++  + ES     + +  G+   K T    I G    G +  AV   + M+
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
               APD +TY  L+ GLCK SK+ EA Q+   M+ +G  P + T  T+   YCK+    
Sbjct: 178 AY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            A  +L+    K ++    T  +LI  LC+E  V  A   F++   KD   D V   +L
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSL 295


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 224/492 (45%), Gaps = 71/492 (14%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           S+ N VV   C+LG V++AE++   M   G   D  SY  ++  +CR G +  A   L +
Sbjct: 57  SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116

Query: 249 ---------------------------MLDR-----GAIL-----DNATLTLLITAFCDK 271
                                      MLD      G +L     +  T +  I  FC  
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G ++ A +    M R    PNV T T LIDG CK G  E A  L+ K +R      N
Sbjct: 177 ---GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY-KEMRRVRMSLN 232

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TYTA+I G+CK+ +M RAE +  RM E  + PN+  YT++I G  + G+ + A   + 
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G   +I AY  II GLC  G+++EA E+++   + +L  D + +T +++ + K  
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352

Query: 452 ETKQALGLFCRMVKAGLNPDIHA------------------------------YTTLIAA 481
             K A+ ++ ++++ G  PD+ A                              YT LI A
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C++    E E+ F +   AGL P K  YTS I G  + GN+  A K   RM Q G   D
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            + Y  LI GL  +  + EA Q ++ M+  GISP       L   Y K+G+ A A  +L 
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532

Query: 602 SLDKKLWIRTVN 613
            + ++  +  V+
Sbjct: 533 DMQRRGLVTAVS 544



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + +RG     SS+  +V   C++G+V  A+  + +M   G   D  +   LI   C  G 
Sbjct: 47  LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNG- 105

Query: 274 RGSIKQAFELLEEM-VRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
              I+ A  +LE +    G+  KP++ +   L +G  K    ++ F     +++     P
Sbjct: 106 --DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC--CSP 161

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV TY+  I  +CK  ++  A      MK   L PN  T+T LI G+CK G+ E A  L 
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M +   + N+  Y A+IDG CKKG +Q A E+  +  +  ++ + + YT ++    ++
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            ++  A+    +M+  G+  DI AY  +I+  C   K+KE+ +  ++   + L P    +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T+M+  Y + G + +AV  + ++ + G  PD +    +I G+ K  +L EA  ++   I 
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIE 399

Query: 571 KGISPCEVTRVTLAYEYCKQGD 592
           K     +V    L    CK+GD
Sbjct: 400 KA---NDVMYTVLIDALCKEGD 418



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 179/359 (49%), Gaps = 8/359 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           + + L  +V +G+ P+  +   ++  +CK G  + A  +   + R    +P+V +Y ++I
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRF-GCEPDVISYNSLI 98

Query: 340 SGYCKEEKMNRAEMLLERMK-EQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            G+C+   +  A ++LE ++   G +  P+  ++ SL  G  K+   +  +  M +M K 
Sbjct: 99  DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK- 157

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C+PN+  Y+  ID  CK G +Q A +      +  L  + +T+T L+  + K  + + A
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + L+  M +  ++ ++  YT LI  FC++ +M+ +E+ +   +   + P    YT++I G
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + + G+  +A+K+  +M   G   D   YG +ISGLC   KL EA +  E M    + P 
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
            V   T+   Y K G    A+ +   L ++ +   +  ++T+I  +    ++  A ++F
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 30/321 (9%)

Query: 133 MRLYIVCATSLISN----GNFERAHE---------------VMQCMVSSFAEIGRLKEGF 173
           M L +V  T+LI      G  +RA E               V   ++  F + G      
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
             + +M N G+ L  +    ++   C  G ++ A E+ ++M    +  D   +  M+ AY
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW- 292
            + GR+  A      +++RG   D   L+ +I      G         +L E +V     
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG---------QLHEAIVYFCIE 399

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           K N   +TVLID LCK+G   +  RLF K+  +    P+   YT+ I+G CK+  +  A 
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEA-GLVPDKFMYTSWIAGLCKQGNLVDAF 458

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L  RM ++GLL +   YT+LIYG    G    A  + D M   G +P+   ++ +I   
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518

Query: 413 CKKGRVQEAYELLKKAFQREL 433
            K+G +  A +LL    +R L
Sbjct: 519 EKEGNMAAASDLLLDMQRRGL 539



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 50/296 (16%)

Query: 351 AEMLLERMKEQGLLPNTNTYT----SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           A   L R+++   LP+  T       LI  +C + + +     +  +   G TP+  ++N
Sbjct: 5   ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHRSSFN 60

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +++  +CK G+V+ A +++                                     M + 
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHS-----------------------------------MPRF 85

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF---PTKETYTSMICGYLRDGNI 523
           G  PD+ +Y +LI   CR   ++ +    +    +  F   P   ++ S+  G+ +   +
Sbjct: 86  GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                Y   M +  C+P+ +TY   I   CK  +L  A + + SM    +SP  VT   L
Sbjct: 146 DEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              YCK GD   A+ + + + +    L + T   LI   C +  +  A   + +++
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPL-ITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   + G L + F +   M   GL L + +    + G+A + GL+  A +VFDEM   G
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK-GLMVEARQVFDEMLNSG 503

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
           +  D++ + L++ AY + G +  A   L  M  RG +
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 219/451 (48%), Gaps = 39/451 (8%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  NG      T    +   C  G VE+A  +  ++  R    ++  Y  ++  +CR G
Sbjct: 278 EMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNG 337

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + EA   L  M   G      + ++LI   C KG    +++A +L+EEMV+   KP++ 
Sbjct: 338 ELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKG---QVEKALDLIEEMVQSNVKPSLV 394

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T++ L DGLCK G TE +  +F  L  ++ YK +V +Y  +I+G+  +  M  A  L+  
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNL-GAEGYKHDVISYNTLINGFVLQRDMGSACKLVHE 453

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC------------------- 398
           M+  G +PN+ T+  LI+G CK    ++A ++  +M K G                    
Sbjct: 454 MRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGH 513

Query: 399 ----------------TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
                            PN Y YN +I  LCK+ + ++A+E+L    +  +    I Y  
Sbjct: 514 FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNT 573

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + KQ+   +AL L+ +M+K G+ P I  YT LI  F  + KM+E+   F+E I  G
Sbjct: 574 LIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKG 633

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P +  +T +I G+ + G++ SA   ++ M+Q G +P+ +TY  LI G  K  ++D+A 
Sbjct: 634 LVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKAD 693

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +  M    ++P  +T   L + Y   G S
Sbjct: 694 FLFNKMKRDNVTPDGLTYTALIFGYQSLGYS 724



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 258/562 (45%), Gaps = 16/562 (2%)

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIG-RLKEGFSMVIE 178
           F+ A+ F  F H +  + +    L S G        ++ ++S + E+   + E FS +++
Sbjct: 108 FFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLD 167

Query: 179 MTNN---GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
              +   G  +I +  N ++ +  E  ++  A +VF +    G+  +  S   ++  +  
Sbjct: 168 SPQDAHMGGSIIVA--NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAE 225

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK--QAFELLEEMVRKGWK 293
             +          + D G   +  T T+++  +C   F  +I   +A E+LEEM   G  
Sbjct: 226 ANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGES 285

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P V T+   I GLC+ G  E A RL ++ +R  N   N + Y A+I  +C+  +++ A  
Sbjct: 286 PTVVTYGAYIHGLCRAGCVEFALRL-IRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFE 344

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LLE M+  G+ P   +Y+ LI G CK G  E+A DL++ M +    P++  Y+++ DGLC
Sbjct: 345 LLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLC 404

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G  + +  +         + D I+Y  L++  + Q +   A  L   M   G  P+  
Sbjct: 405 KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSF 464

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            +  LI  FC+++++ ++ + F   +  G+     T   M   + R+G+   A+K    +
Sbjct: 465 TFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEV 524

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +G  P++ TY  +I  LCK+ K ++A +    M+   + PC +   TL   Y KQ + 
Sbjct: 525 QDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNP 584

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVS 646
             A+++   + K      I T   LI    +  ++  A   F +++ K    D+ +    
Sbjct: 585 TKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCI 644

Query: 647 LAALKNACYESNKYALFSDLSQ 668
           +A         + +AL+ ++SQ
Sbjct: 645 IAGFCKVGDMKSAWALYEEMSQ 666


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 236/505 (46%), Gaps = 41/505 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C  G +  A      M   G+  D  +Y  ++ A+CR G + EA   L+ M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G     AT   L++A+   G+   IKQA  ++E M   G++P+++T+ VL  GLC+ 
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGW---IKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQA 328

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++AF+L  ++       P+V TY  ++    K ++ + A  LLE M+++G+  +  T
Sbjct: 329 GKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVT 388

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------------ 411
           +  ++ G C+ G  E A   + +M +EG  P++  YN +ID                   
Sbjct: 389 HNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMV 448

Query: 412 -----------------LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
                            LCK+ R +EA ELL+   QR    D+++Y  +++ + K+ + +
Sbjct: 449 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPE 508

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L+  M K  L P I+ Y TLI   C   K+ E+     E +  GL P   TY  +I
Sbjct: 509 PALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIII 568

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y ++G++  A ++  +M +    PD +T   L++GLC   KL++A + +ES   KG  
Sbjct: 569 HAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKK 628

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALF 631
              +T  TL    CK GD  TA+     ++ +       T N ++  L    R   A   
Sbjct: 629 VDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNM 688

Query: 632 FHKLLGKDQNVDRVSLAALKNACYE 656
            HKL    +  +R S   +K++  E
Sbjct: 689 LHKLDESGKLSERFSYPLIKSSAEE 713



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 202/431 (46%), Gaps = 40/431 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L E  +++  M   G+    +T N +V     LG ++ A  V + M A G   D  +Y
Sbjct: 259 GMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTY 318

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLE 285
            ++    C+ G+V EA +    M     +  D  T   L+ A C K  R S   A  LLE
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDA-CFKYQRSS--DALNLLE 375

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  KG K ++ TH +++ GLC++G  E+A    LK++  +   P+V TY  +I  YCK 
Sbjct: 376 EMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR-LKMMTEEGLAPDVITYNTLIDAYCKA 434

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM--------------- 390
             + +A +L++ M   GL  +T T  +L+Y  CK   +E A +L+               
Sbjct: 435 RNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSY 494

Query: 391 --------------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
                               D M K   TP+IY YN +I GLC  G++ EA + L +  +
Sbjct: 495 GTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMK 554

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           + L  D  TY I++  + K+ + ++A     +M++    PD+    TL+   C   K+++
Sbjct: 555 KGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEK 614

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + K F+     G      TY ++I    +DG++ +A+ +F  M   G  PD  TY  ++S
Sbjct: 615 AIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 674

Query: 551 GLCKQSKLDEA 561
            L +  + +EA
Sbjct: 675 ALSEAGRSEEA 685



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 176/400 (44%), Gaps = 5/400 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V      G+L+E    +  MT  GL     T N ++   C+   V  A  + DEM   G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +   ++   C+  R  EA+  L +   RG + D  +   ++ A+  +      +
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN---KPE 508

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM ++   P++YT+  LI GLC  G   +A     +L++     P+  TY  +
Sbjct: 509 PALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK-GLVPDDTTYNII 567

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YCKE  + +A     +M E    P+  T  +L+ G C  G  E+A  L +   ++G 
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  YN +I  LCK G V  A         R LQ D  TY ++LS   +   +++A  
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE-KFFQEAITAGLFPTKETYTSMICGY 517
           +  ++ ++G   +  +Y  + ++    K  K+ E K   E+        +E+Y   +   
Sbjct: 688 MLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKEL 747

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
              G +  A      M Q G + D+ TY  L+ GL K+ K
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F+E+G ++E   +  +M  + LP + +  N V+    + G  +   +V+ +M
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKM--DVLPAMQAC-NMVLDGLVKKGRFDTMWKVYGDM 184

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ARG   +  +Y  ++   CR G   +A R    M+++         T+LI   C +   
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGES-- 242

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I +A  +   M   G  PN+YT+  ++DG CK    +KA  L+ +++  D   PNV T
Sbjct: 243 -RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML-GDGLLPNVVT 300

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I G CK ++M  A   L  M   G++PN   Y  LI G+CK GN   A  L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K    P+++ Y+ +I GLC   R++EA  LL++  ++    + +TY  L+  + K+   +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ +  +M + G+ P+I  ++TLI  +C+  KM+ +   + E +  GL P    YT++I
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            G+ +DGN   A +  + M + G  P+  T   LI GLCK  ++ +A + + +  G
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 223/442 (50%), Gaps = 16/442 (3%)

Query: 168 RLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           R  E   +  EM   G +P + S    + G  C  G  E A+ +F+EM   G+  D ++ 
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGF-CLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++   C+ G+V EA++ L  ++ RG I D  T T L+   C    +  I +A +L  +
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC---MKHRISKATQLFLK 432

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNVHTYTAMISG 341
           M + G  PNV T   L+ GLC+ G  + A  L   ++        N KPN  +Y+ +I G
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK  + + A  L + MK  G++P+  +YTSLI+G C+ G ++ A  L + M   G  P+
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  ++ +ID LCK+G+V EA ELL+   QR    + +TYT L+          +A  LF 
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT------AGLFPTKETYTSMIC 515
           +M K G  PD+  Y TL+   C+   +K + +  ++ ++          P   +Y+ +I 
Sbjct: 613 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 672

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G    A + F+ M  +G  P+ I+Y +LI G C+  KL++A   +  M+ +G+  
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 732

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
             VT   + + +CK+G    A+
Sbjct: 733 NAVTYSVMIHGFCKEGQIDKAL 754



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 230/463 (49%), Gaps = 23/463 (4%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D ++  +++  +C+ G+V EA+  L  M+ RG ILD  T + LI   C    +  I
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLC---MKHRI 61

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-----KPNV 332
            +A +L   M + G +P+   +  L+ GLC+ G    A  L  +++   +      KP +
Sbjct: 62  SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTL 121

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+ +I G CK+ + + A  L + MK QG++P+  +YTSLI+G C+ G +E+A  L + 
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G   ++   + +ID LCK+G+V EA ELL+   QR    D +TY+ L+     +  
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT-AGLF-----PT 506
             +A  LF  M K G  PD  AY TL+   C+   +  + +  QE +   G +     PT
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y+ +I G  +D     A + F+ M   G  PD I+Y  LI G C   K ++A   + 
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEK 623
            M+  GI P   T   L    CK+G    A  +LE + ++  I    T  TL++ LC + 
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 624 RVGMAALFFHKL--LGKDQNVDRVSLAAL-KNACYESN-KYAL 662
           R+  A   F K+  LG   NV  V+ A L K  C   N K AL
Sbjct: 422 RISKATQLFLKMQKLGCMPNV--VTCATLMKGLCQSGNIKIAL 462



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 228/459 (49%), Gaps = 21/459 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY +++   C+  R  EA      M  +G + D  + T LI  FC     G  ++A  L 
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC---LSGKWEKAKCLF 360

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM+  G +P+V T +VLID LCKKG   +A +L L++V      P+V T T ++ G C 
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL-LEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------GC 398
           + ++++A  L  +M++ G +PN  T  +L+ G C+ GN + A +L   M  +       C
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN  +Y+ IIDGLCK GR  EA EL K+     +  D I+YT L+    +  + K A  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G+ PD+  ++ LI   C++ K+ E+ +  +  I  G  P   TYT+++ G  
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI------GKG 572
            +  IS A + F +M ++GC PD +TYG L+ GLC+   +  A + ++ M+      G  
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAA 629
             P  ++   +    CK G    A  + + +     I  V    +LI   C   ++  A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESN-KYALFSDL 666
             F++++ +   ++ V+ + + +  C E     ALF  +
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKM 758



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 208/451 (46%), Gaps = 54/451 (11%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY +++   C+  R  EA      M  +G + D  + T LI  FC  G     ++A  L 
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSG---KWEKAKCLF 179

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM+  G + +V T ++LID LCK+G   +A  L L+++       ++ TY+ +I G C 
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANEL-LEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM----GKEG--C 398
           + +++ A  L   M++ G  P+   Y +L+ G C+ GN   A  L   M    G+ G  C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P + +Y+ IIDGLCK  R  EA EL K+   + +  D I+YT L+       + ++A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+  G+ PD+   + LI   C++ K+ E+ K  +  I  G  P   T T+++ G  
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNIT---------------------------------- 544
               IS A + F +M ++GC P+ +T                                  
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 545 -------YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
                  Y  +I GLCK  + DEA + ++ M   G+ P  ++  +L + +C+ G    A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 598 IIL-ESLDKKLW--IRTVNTLIRKLCSEKRV 625
            +  E +D  +   + T + LI  LC E +V
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 569



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 7/289 (2%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G +P+V T  VLID  CK+G   +A  L   +V+      ++ TY+ +I G C + 
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCI-LDIVTYSTLIKGLCMKH 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------GCTP 400
           +++ A  L   MK+ G  P+   Y +L+ G C+ G    A  L   M  +       C P
Sbjct: 60  RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
            + +Y+ IIDGLCK  R  EA EL K+   + +  D I+YT L+    +  + ++A  LF
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M+  G+  D+   + LI   C++ K+ E+ +  +  I  G      TY+++I G    
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
             IS A + F  M ++GC PD I YG L+ GLC+   ++ A Q ++ M+
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 10/269 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++    + GR  E   +  EM   G +P + S  + + G  C  G  + A+ +F+EM   
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF-CRSGKWKDAKYLFNEMVDI 547

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  D +++ +++   C+ G+V EA+  L  M+ RG I +  T T L+   C       I
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC---MNDRI 604

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNV 332
            +A +L  +M + G  P+V T+  L+ GLC+ G  + A  L  K++        N+KP+V
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+ +I G CK  + + A  L + MK  G++PN  +YTSLI+G C+ G  E A  L + 
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           M  +G   N   Y+ +I G CK+G++ +A
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 272/593 (45%), Gaps = 30/593 (5%)

Query: 74  YQQFHLRSSPPRLNLQIDIDSLTHEQAIT-----VVASLANEAGSMVALSFFYWAIGFAK 128
           +  F L  +PP   +     +  H  A++     ++ SL ++     AL  F  A     
Sbjct: 22  HHSFSLNLTPPSSTISF---ASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPN 78

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGR---------------LKEGF 173
           F     LY      L  +G+F+   ++++ M SS  E+G                  E  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138

Query: 174 SMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           S+V  M +  GL   T   NR++ +  +   ++  E    +M   G+  D S++ +++ A
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            CR  ++  A   L  M   G + D  T T ++  + ++G    +  A  + E+MV  G 
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG---DLDGALRIREQMVEFGC 255

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
             +  +  V++ G CK+G  E A     ++   D + P+ +T+  +++G CK   +  A 
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            +++ M ++G  P+  TY S+I G CK+G  + A +++D M    C+PN   YN +I  L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+ +V+EA EL +    + +  D  T+  L+         + A+ LF  M   G  PD 
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y  LI + C + K+ E+    ++   +G   +  TY ++I G+ +      A + F  
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G + +++TY  LI GLCK  ++++A Q  + MI +G  P + T  +L   +C+ GD
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555

Query: 593 SATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
              A  I++++     +  I T  TLI  LC   RV +A+     +  K  N+
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 205/463 (44%), Gaps = 40/463 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +     +L+    M+ +M + GL     T   V+    E G ++ A  + ++M   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNATLTLLITAFCDKGFRGSI 277
                 S  ++V  +C+ GRV +A  ++  M ++ G   D  T   L+   C  G    +
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG---HV 311

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A E+++ M+++G+ P+VYT+  +I GLCK G  ++A  +  +++  D   PN  TY  
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNT 370

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +IS  CKE ++  A  L   +  +G+LP+  T+ SLI G C   N   A +L + M  +G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430

Query: 398 CTPN-----------------------------------IYAYNAIIDGLCKKGRVQEAY 422
           C P+                                   +  YN +IDG CK  + +EA 
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E+  +     +  + +TY  L+    K    + A  L  +M+  G  PD + Y +L+  F
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR   +K++    Q   + G  P   TY ++I G  + G +  A K  + +   G     
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
             Y  +I GL ++ K  EA   +  M+ +  +P +     + +
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 5/364 (1%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G KP+V T  VLI  LC+      A  L L+ + S    P+  T+T ++ GY +E  ++ 
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEGCTPNIYAYNAII 409
           A  + E+M E G   +  +   +++G CK G  E A + +  M  ++G  P+ Y +N ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           +GLCK G V+ A E++    Q     D  TY  ++S   K  E K+A+ +  +M+    +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+   Y TLI+  C++ +++E+ +  +   + G+ P   T+ S+I G     N   A++ 
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F+ M   GC PD  TY  LI  LC + KLDEA    + M   G +   +T  TL   +CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
              +  A  I + ++     R   T NTLI  LC  +RV  AA    +++ + Q  D+ +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542

Query: 647 LAAL 650
             +L
Sbjct: 543 YNSL 546



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G +K+   +V  MT+NG      T   ++   C+ G VE A ++   +  +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG-AILDNATLTLLITAFCDKGFRGSI 277
           +     +Y  ++    R  + TEA      ML++  A  D  +  ++    C+ G  G I
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG--GPI 663

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A + L E++ KG+ P   +  +L +GL      E   +L   +++   +        +
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS---EEEVS 720

Query: 338 MISGYCKEEKMNRA 351
           M+ G  K  K   A
Sbjct: 721 MVKGLLKIRKFQDA 734


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 217/446 (48%), Gaps = 7/446 (1%)

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
           +++G   ++   + A  +  EM   G+ +D  ++ +++  + ++G    +    + +L +
Sbjct: 61  KILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKK 120

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   +  TLT LI   C    +G I QA    +++V  G+  N   +  LI+GLCK G T
Sbjct: 121 GYEPNAITLTTLIKGLC---LKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQT 177

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
             A +L L+ V     +PNV  Y  +I   CK + +N A  L   M  +G+ P+  TY++
Sbjct: 178 SAALQL-LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI G C +G    A  L + M  E   P++Y ++ ++DG CK+GRV+EA  +L    ++ 
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           ++ D +TY  L+  +    +  +A  +F  M + G+  ++ +Y  +I  FC+ KK+ E+ 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E     + P   TY S+I G  + G IS A+K    M+  G   D ITY +++  L
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           CK  ++D+A      M  +GI P   T   L    CK G    A  I E L  K +  TV
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 613 NT---LIRKLCSEKRVGMAALFFHKL 635
            T   +I+  C       A     K+
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKM 502



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 197/375 (52%), Gaps = 4/375 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G    A ++   +  + V  +   Y  ++ + C++  V EA    S M+ +G   D 
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI+ FC     G +  A  L  +M+ +   P+VYT ++L+DG CK+G  ++A + 
Sbjct: 232 VTYSALISGFC---ILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA-KN 287

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++     KP+V TY +++ GYC  +++N+A+ +   M + G+  N  +Y  +I G C
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+   + A +L   M  +   P++  YN++IDGLCK G++  A +L+ +   R +  DKI
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +L    K  +  +A+ L  +M   G+ PD++ YT LI   C+  ++K+++  F++ 
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G   T  TYT MI G+  +     A+    +M   GC P+  TY  +I  L ++ + 
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527

Query: 559 DEACQFYESMIGKGI 573
           D A +    MI +G+
Sbjct: 528 DMAEKLLREMIARGL 542



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 225/483 (46%), Gaps = 7/483 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  +I   +   S+  EM  NG+     T N ++    +LG   ++  VF  +  +G
Sbjct: 62  ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +   ++   C  G++ +A  +   ++  G  L+      LI   C     G   
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK---VGQTS 178

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL  +  K  +PNV  +  +ID +CK     +AF L+ ++V S    P+V TY+A+
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV-SKGISPDVVTYSAL 237

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+C   K+N A  L  +M  + + P+  T++ L+ G CK G  + A +++ +M K+G 
Sbjct: 238 ISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y +++DG C   +V +A  +     Q  + A+  +Y I+++   K  +  +A+ 
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMN 357

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M    + PD+  Y +LI   C+  K+  + K   E    G+   K TY S++    
Sbjct: 358 LFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALC 417

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++  +  A+    +M   G  PD  TY  LI GLCK  +L +A   +E ++ KG +    
Sbjct: 418 KNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVY 477

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   +   +C       A+ +L  ++    I   +T   +I  L  +    MA     ++
Sbjct: 478 TYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537

Query: 636 LGK 638
           + +
Sbjct: 538 IAR 540



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 5/341 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P +  +  ++    K      A  L   M+  G+  +  T+  LI    ++G+   +
Sbjct: 51  NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + +   + K+G  PN      +I GLC KG++ +A     K        +K+ Y  L++ 
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +T  AL L  R+    + P++  Y T+I + C+ K + E+   + E ++ G+ P 
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY+++I G+   G ++ A+  F +M      PD  T+  L+ G CK+ ++ EA     
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            M+ +GI P  VT  +L   YC       A  I  ++ +      +++ N +I   C  K
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK--YAL 662
           +V  A   F ++  K+   D V+  +L +   +S K  YAL
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           M++ F +I ++ E  ++  EM   N +P +  T N ++   C+ G + YA ++ DEM  R
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVV-TYNSLIDGLCKSGKISYALKLVDEMHDR 400

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  D  +Y  ++ A C+  +V +A   L+ M D G   D  T T+LI   C KG  G +
Sbjct: 401 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC-KG--GRL 457

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A  + E+++ KG+   VYT+TV+I G C     +KA  L  K+   +   PN  TY  
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM-EDNGCIPNAKTYEI 516

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I    ++++ + AE LL  M  +GLL
Sbjct: 517 IILSLFEKDENDMAEKLLREMIARGLL 543



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 3/208 (1%)

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            H  Q +    +  F R++     P I  +  ++ +  +    + +    +E    G+  
Sbjct: 30  HHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIAS 89

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              T+  +I  + + G+   +   F  + + G  P+ IT   LI GLC + ++ +A  F+
Sbjct: 90  DLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFH 149

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSE 622
           + ++  G    +V   TL    CK G ++ A+ +L  +D KL    V   NT+I  +C  
Sbjct: 150 DKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 209

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K V  A   + +++ K  + D V+ +AL
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSAL 237


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 190/350 (54%), Gaps = 4/350 (1%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           +LD G   +     +L+  FC  G    +  A  + +E+ R+G +P+V +   LI G C+
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIG---DVMNARMVFDEISRRGLRPSVVSFNTLISGYCR 273

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               E+ F L   ++ S+   P+V TY+A+I+G CKE ++  A  L + M E GL+PN  
Sbjct: 274 SKNVEEGFVL-KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+T+LI G CK G  + A    ++M   G  P++  YNA+I+GLC+ G ++EA +LL + 
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                + DKIT+T L+    K  +   AL +  RMV+ G+  D  A+T LI+  CR  ++
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           +++E+  ++ ++AG  P   TYT +I  + + G++    K  + M + G  P  +TY AL
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           ++G CKQ ++  A     +M+   + P ++T   L   +CK G S    I
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKI 562



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 167/312 (53%), Gaps = 3/312 (0%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y PNV+ +  ++ G+CK   +  A M+ + +  +GL P+  ++ +LI G+C+  N E  +
Sbjct: 222 YPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGF 281

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L  +M  E  +P+++ Y+A+I+GLCK+ RV+EA  L  +  +  L  + +T+T L+   
Sbjct: 282 VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQ 341

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +   AL  F  M   G+ PD+  Y  LI   CR   +KE+ K   E I  G  P K
Sbjct: 342 CKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDK 401

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+T+++ G  +DG++ SA++   RM + G   D++ + ALISGLC+  ++ +A +  + 
Sbjct: 402 ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKR 624
           M+  G  P + T   +   +CK+GD      +L+ + +      + T N L+   C + +
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521

Query: 625 VGMAALFFHKLL 636
           +  A +  H +L
Sbjct: 522 MKNAKMLLHAML 533



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 7/381 (1%)

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           +E+ + G P      N ++   C++G V  A  VFDE+  RG+     S+  ++  YCR 
Sbjct: 215 LEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRS 274

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
             V E     S M       D  T + LI   C +     +++A  L +EM   G  PN 
Sbjct: 275 KNVEEGFVLKSVMESERISPDVFTYSALINGLCKE---SRVEEANGLFDEMCEMGLVPNG 331

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T T LIDG CK G  + A R F ++++    +P++ TY A+I+G C++  +  A  LL 
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNF-EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLN 390

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G  P+  T+T+L+ G CK G+ + A ++ D M +EG   +  A+ A+I GLC+ G
Sbjct: 391 EMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDG 450

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           RV++A  +LK       + D  TYT+++    K+ + K    L   M + G  P +  Y 
Sbjct: 451 RVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYN 510

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            L+  FC+Q +MK ++      +   + P   T+  ++ G+ + G   S+V +     + 
Sbjct: 511 ALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG---SSVDFKIFNGEK 567

Query: 537 GCAPDNITYGALISGLCKQSK 557
           G   D  +Y AL++   K SK
Sbjct: 568 GLVSDYASYTALVNESIKISK 588



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 7/365 (1%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L RV+ +  + G   +  E + E+   G   +   + +++  +C++G V  A      + 
Sbjct: 197 LRRVMKLNQQPG---HCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEIS 253

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG      +   LI+ +C      ++++ F L   M  +   P+V+T++ LI+GLCK+ 
Sbjct: 254 RRGLRPSVVSFNTLISGYCRS---KNVEEGFVLKSVMESERISPDVFTYSALINGLCKES 310

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             E+A  LF ++       PN  T+T +I G CK  K++ A    E MK++G+ P+  TY
Sbjct: 311 RVEEANGLFDEMCEM-GLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITY 369

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI G C+ G+ + A  L++ M   G  P+   +  ++DG CK G +  A E+  +  +
Sbjct: 370 NALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVE 429

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             ++ D + +T L+S   +    + A  +   M+ AG  PD   YT +I  FC++  +K 
Sbjct: 430 EGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKM 489

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             K  +E    G  P   TY +++ G+ + G + +A      M  +   P++IT+  L+ 
Sbjct: 490 GAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLD 549

Query: 551 GLCKQ 555
           G CK 
Sbjct: 550 GHCKH 554



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 163/321 (50%), Gaps = 7/321 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S +     ++EGF +   M +  +     T + ++   C+   VE A  +FDEMC  G
Sbjct: 267 LISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG 326

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C+ G++  A R    M DRG   D  T   LI   C     G +K
Sbjct: 327 LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRD---GDLK 383

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL EM+  G+KP+  T T L+DG CK G  + A  +  ++V       +V  +TA+
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV-AFTAL 442

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C++ ++  AE +L+ M   G  P+  TYT +I   CK G+ +    L+  M ++G 
Sbjct: 443 ISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGR 502

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YNA+++G CK+G+++ A  LL      E+  + IT+ ILL  H K   +     
Sbjct: 503 VPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FK 561

Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
           +F    + GL  D  +YT L+
Sbjct: 562 IF--NGEKGLVSDYASYTALV 580



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 11/271 (4%)

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           GHC    +E   +++D     G  PN+Y +N ++ G CK G V  A  +  +  +R L+ 
Sbjct: 208 GHC----WEFYLEVLDY----GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRP 259

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
             +++  L+S + +    ++   L   M    ++PD+  Y+ LI   C++ +++E+   F
Sbjct: 260 SVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLF 319

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            E    GL P   T+T++I G  + G I  A++ F+ M   G  PD ITY ALI+GLC+ 
Sbjct: 320 DEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRD 379

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV-- 612
             L EA +    MIG G  P ++T  TL    CK GD  +A+ I + + ++ + +  V  
Sbjct: 380 GDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             LI  LC + RV  A      +L      D
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPD 470



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 7/222 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G LKE   ++ EM  NG      T   ++   C+ G ++ A E+ D M   G
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  ++  ++   CR GRV +A+R L  ML  G   D+ T T++I  FC K   G +K
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKK---GDVK 488

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              +LL+EM R G  P V T+  L++G CK+G  + A ++ L  + +    PN  T+  +
Sbjct: 489 MGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNA-KMLLHAMLNMEVVPNDITFNIL 547

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           + G+CK       ++      E+GL+ +  +YT+L+    K+
Sbjct: 548 LDGHCKHGSSVDFKIF---NGEKGLVSDYASYTALVNESIKI 586



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 6/277 (2%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-QAETKQALGL 459
           ++  ++A+I        +++A + L+   +            LL   +K   +       
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEF 213

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           +  ++  G  P+++ +  L+  FC+   +  +   F E    GL P+  ++ ++I GY R
Sbjct: 214 YLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCR 273

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             N+         M     +PD  TY ALI+GLCK+S+++EA   ++ M   G+ P  VT
Sbjct: 274 SKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVT 333

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKL 635
             TL    CK G    A+   E + K   IR    T N LI  LC +  +  A    +++
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIM-KDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           +G     D+++   L + C +        ++  R+ E
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVE 429


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 236/525 (44%), Gaps = 47/525 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   ++   C  G +  A++    +   G+  D+ +Y   V+ YCR G +T A R    M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM---------------------- 287
             RG +    T T L+      G    +++A  +   M                      
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGM---VREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 288 -------------VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
                        +  G++PN+  +  LIDG C  G  E A ++F + +  +   PNV T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRT 249

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G CK  K+ RA +L  RM E GL PN  TYT+LI G C  G+ + A+ L+ LM 
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  PN + ++ +ID LCK+ +V+EA   L    ++ ++ +++ YT L+    K  +  
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L  +M+  G  PD H+Y++LI   CRQKK+ ++    ++ +  G+  +  TYT +I
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              +R+       K F +M   G  PD +TY   +   C++ ++++A      M+ +G+ 
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT-------LIRKLCSEKRVGM 627
           P  VT  TL   Y   G  + A    E +  K W    ++       +++K  S+  V +
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             +   K L ++ N D +    L     +    A FS L   + E
Sbjct: 550 WKIADMKDL-QESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE 593



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 210/400 (52%), Gaps = 4/400 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E  ++ + M  +     T     +V   CE G  E AE + +E  + G   +   Y
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC  G +  A +    M       +  T T LI   C     G +++A  L   
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS---GKVERAMVLFSR 272

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G +PNV T+T LI G C +G  + AFRL L L+ ++   PN  T++ +I   CK E
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL-LHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  A++ L  + ++G+  N   YTSLI G CK G  + A +LM  M  EG  P+ ++Y+
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLC++ ++ +A  +L+   ++ +QA  +TYTI++ E +++  ++    +F +M+  
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT 451

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+NPDI  YT  + ++C + +M+++E    + +  G+FP   TY ++I GY   G +S A
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              F+ M   G  P+  +Y  L+  + K+S  D +   ++
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 203/424 (47%), Gaps = 7/424 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   MV    E GR +E   ++ E  +NG        N ++   C  G +E+A +VF+ M
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +  +Y  ++   C+ G+V  A    S M++ G   +  T T LI   C++G  
Sbjct: 239 DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH- 297

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             ++ AF LL  M   G  PN +T +VLID LCK+   E+A +LFL  +     K N   
Sbjct: 298 --LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKGVKVNEVV 354

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT++I G CK  K++ A+ L+++M  +G +P+ ++Y+SLI G C+     +A  +++ M 
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   +   Y  IID L ++   +   ++  K     +  D +TYT+ +  + ++   +
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +  +MV  G+ P++  Y TLI  +     + ++   F+  +  G  P +++YT ++
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAP---DNITYGALISGLCKQSKLDEACQFYESMIGK 571
              ++  +  ++V  ++  +         D I +  LI GL ++  + E       M   
Sbjct: 535 RLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 594

Query: 572 GISP 575
           G  P
Sbjct: 595 GYQP 598



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 4/361 (1%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           F  +E +  +    N+ T+T LI+  C  G    A +    L+ +    P+ + YT+ + 
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVL 115

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYC+   +  A  +   M  +G L    TYT+L++G    G    A  +   M  + C P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           + + Y  ++ GLC+ GR +EA  LL++A     + + + Y  L+  +    E + AL +F
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M     +P++  YT LI   C+  K++ +   F   + AGL P   TYT++I G   +
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++  A +    M   G  P++ T+  LI  LCK+ K++EA  F  S++ KG+   EV  
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            +L    CK G    A  +++ +  + ++    + ++LI  LC +K++  A L    ++ 
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415

Query: 638 K 638
           K
Sbjct: 416 K 416



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 124/350 (35%), Gaps = 82/350 (23%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P +   N ++  L +     +   L  +   R L+    TYT L++ +    +   A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              ++ AGL PD +AYT+ +  +CR   +  + + F      G   T  TYT+++ G L 
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 520 DGNISSAVKYFQRMNQIGCAPDN-----------------------------------IT 544
            G +  A+  F  M    CAPD                                    + 
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---- 600
           Y ALI G C   +++ A + +E M G   SP   T   L +  CK G    AM++     
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 601 ------------------------------------ESLDKKLWIRTVNTLIRKLCSEKR 624
                                                 L    W  T + LI  LC  ++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW--TFSVLIDALCKREK 332

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR-IAEG 673
           V  A LF   L+ K   V+ V   +L +   ++ K     +L Q+ I+EG
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 195/345 (56%), Gaps = 4/345 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  ++I   C +G     K+A + +  M   G KPNV T+  +I+G C +G  E A ++
Sbjct: 218 VTFNIMINILCREG---KWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKI 274

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F K ++  N KP+ +TY + IS  CKE ++  A  +L ++ E GL+PN  TY +LI G C
Sbjct: 275 F-KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCC 333

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G+ ++A+   D M   G   +++ YN +I  L  + R++EA +++K+  ++ ++ D +
Sbjct: 334 NKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVV 393

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY I ++ + +    K+AL LF  MV+  + P +  YT+LI  F ++ +M E+E+ F+++
Sbjct: 394 TYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           I  G+ P    + ++I G+  +GNI  A +  + M+     PD +T+  L+ G C++ K+
Sbjct: 454 IKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV 513

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +EA +  + M  +GI P  ++  TL   Y K+GD   A+ + + +
Sbjct: 514 EEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ I C  G  + A++    M   GV  +  +Y  ++  YC  G+   A +    M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            D+    D  T    I+  C +     I++A  +L +++  G  PN  T+  LIDG C K
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKER---RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK 335

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KAF  +   + +     +V TY  +I     E+++  AE +++ M+E+G+ P+  T
Sbjct: 336 GDLDKAFA-YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y   I G+C+ GN ++A  L D M ++   P +  Y ++ID   K+ R+ EA E  KK+ 
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +  D I +  L+  H       +A  L   M  A + PD   + TL+  +CR++K++
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE 514

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E++K   E    G+ P   +Y ++I GY + G++  A++ F  M  +G  P  +TY ALI
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G  K  + D A +    M  KGI+P + T
Sbjct: 575 QGYSKIGEADHAEELLREMQSKGITPDDST 604



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 198/402 (49%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++     G+ K+    +  M   G+     T N V+   C  G  E A ++F  M  + 
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y   +   C+  R+ EA   L  +L+ G + +  T   LI   C+KG    + 
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKG---DLD 339

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF   +EM+ +G   +V+T+ +LI  L  +   E+A  + +K +R    +P+V TY   
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM-IKEMREKGVEPDVVTYNIQ 398

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+     +A  L + M E+ + P   TYTSLI    K      A +      KEG 
Sbjct: 399 INGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  +NA+IDG C  G +  A++LLK+    ++  D++T+  L+  + ++ + ++A  
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ PD  +Y TLI+ + ++  MK++ + F E ++ G  PT  TY ++I GY 
Sbjct: 519 LLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYS 578

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           + G    A +  + M   G  PD+ TY  +I  +     L E
Sbjct: 579 KIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 169/361 (46%), Gaps = 19/361 (5%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FE A ++ + M               +S   +  R++E   ++ ++  +GL     T 
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C  G ++ A    DEM  RG+ A   +Y L++ A     R+ EA+  +  M +
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +G   D  T  + I  +C  G   + K+A  L +EMV K  +P V T+T LID   K+  
Sbjct: 386 KGVEPDVVTYNIQINGYCRCG---NAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             +A   F K ++ +   P++  + A+I G+C    ++RA  LL+ M    ++P+  T+ 
Sbjct: 443 MSEAEEKFKKSIK-EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +L+ G+C+    E A  L+D M + G  P+  +YN +I G  K+G +++A E+  +    
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL 561

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
                 +TY  L+  + K  E   A  L   M   G+ PD   Y  +I A      + E+
Sbjct: 562 GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVEN 621

Query: 492 E 492
           +
Sbjct: 622 D 622



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 7/408 (1%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           LS   +R  +       LL++A+C   FR    +A E L  M      P   T   L+  
Sbjct: 135 LSLARNRLNVKTTLVFDLLLSAYCQ--FRKP-DEALECLNLMKENEIIPKTETCNSLLSL 191

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L K    + A+ ++ ++V+  N K ++ T+  MI+  C+E K  +A+  +  M+  G+ P
Sbjct: 192 LLKLNKIKMAWFVYEEMVKM-NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKP 250

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  TY ++I G+C  G FE A  +   M  +   P+ Y YN+ I  LCK+ R++EA  +L
Sbjct: 251 NVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            K  +  L  + +TY  L+     + +  +A      M+  G+   +  Y  LI A   +
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           K+++E+E   +E    G+ P   TY   I GY R GN   A+  F  M +    P   TY
Sbjct: 371 KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +LI    K++++ EA + ++  I +G+ P  +    L   +C  G+   A  +L+ +D 
Sbjct: 431 TSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN 490

Query: 606 KLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              +    T NTL++  C E++V  A     ++  +    D +S   L
Sbjct: 491 AKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 3/184 (1%)

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            +  L++A+C+ +K  E+ +         + P  ET  S++   L+   I  A   ++ M
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            ++      +T+  +I+ LC++ K  +A  F   M   G+ P  VT  T+   YC +G  
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 594 ATAMIILESL-DKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A  I +++ DK L     T N+ I +LC E+R+  A+    KLL      + V+  AL
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 651 KNAC 654
            + C
Sbjct: 329 IDGC 332


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 226/451 (50%), Gaps = 15/451 (3%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D  C   + AD     ++V+A+ R  ++           D G  L   +   L++    +
Sbjct: 79  DSFCVNSILAD-----MLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKE 133

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G ++  +    EM+++  + NV +  ++++GLCK G   +A  + ++ ++     PN
Sbjct: 134 SENGDMEFVYR---EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV-IEDMKVWGVSPN 189

Query: 332 VHTYTAMISGYCKEE---KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           V TY  +I GYCK     KM +A+ +L+ M  +G+ PN  TY  LI G CK  N   A  
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   M ++G  PN+  YN +I+GLC  G+V EA  L  +    +L+ + +T+ +L++   
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFC 309

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K     +A+ LF  M K G++P+   YTTLI A+C+  +M+++   +   I  G+FP   
Sbjct: 310 KNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVS 369

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY  +I G  R G++ +A      M     + D +TY  LI  LCK+ +  +A +  + M
Sbjct: 370 TYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRV 625
             KG++P  VT  TL   YC++G+   A+I+   +E   K+  + T N LI+  C + R+
Sbjct: 430 FEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRL 489

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
             A    +++L +    +R +   +K    E
Sbjct: 490 EDANGLLNEMLERGLVPNRTTYEIIKEEMME 520



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 201/395 (50%), Gaps = 6/395 (1%)

Query: 202 GLVEYAEE-----VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           GLV+ +E      V+ EM  R +  +  S+ ++V   C++G++  A   +  M   G   
Sbjct: 129 GLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP 188

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +  T   LI  +C  G  G + +A  +L+EMV KG  PN  T+ +LIDG CK      A 
Sbjct: 189 NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAM 248

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           R+F ++ R    +PNV TY  +I+G C + K++ A  L ++M    L PN  T+  LI G
Sbjct: 249 RVFGEMQRQ-GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK      A +L + M K+G  PN   Y  +ID  CK GR+++A+ L      R +  +
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPE 367

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY  L++   ++ + K A  L   MV   L+ D+  Y  LI + C++ + +++ K   
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLD 427

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    GL P+  TY +++ GY R+GN+ +A+    RM + G   + +T+  LI G C + 
Sbjct: 428 EMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKG 487

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +L++A      M+ +G+ P   T   +  E  ++G
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G++ E  ++  +M ++ L     T N ++   C+   V  A  +F++M  +G
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +A +Y  ++ AYC+ GR+ +A    + M+DRG   + +T   LI   C KG    +K
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG---DVK 385

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+ EMV K    +V T+ +LID LCKKG + KA +L  ++       P+  TY  +
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK-GLNPSHVTYNTL 444

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC+E  +  A ++  RM+ +G   N  T+  LI G C  G  E A  L++ M + G 
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL 504

Query: 399 TPNIYAYNAIIDGLCKKGRVQE 420
            PN   Y  I + + +KG V +
Sbjct: 505 VPNRTTYEIIKEEMMEKGFVPD 526



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 3/156 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++     G +K   S++ EM +  L     T N ++   C+ G    A ++ DEM  
Sbjct: 372 NCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFE 431

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+     +Y  ++  YCR G +  A    + M  +G   +  T  +LI  FC    +G 
Sbjct: 432 KGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFC---LKGR 488

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           ++ A  LL EM+ +G  PN  T+ ++ + + +KG+ 
Sbjct: 489 LEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 252/614 (41%), Gaps = 86/614 (14%)

Query: 140 ATSLISNGNFERAHEVM--QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           A +L   G    A +V+    +++ +  +G      S+   MT  GLP+     N +V  
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
            C  G V+ A  V D M   GV  + ++Y   +V YCR   V EA      M+  G +LD
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 258 NATLTLLITAFCDKG--------FR------------------------GSIKQAFELLE 285
             TL+ L+   C  G        FR                        G  K+   LL 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EMV +G   ++ T+T L+D L K+G T++  +  L+   SDN  PN  TYT +I   CK 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEV-KDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             ++ AE +L  M+E+ + PN  T++S+I G  K G  ++A +   +M + G  PN+  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 406 NAIIDG-----------------LC------------------KKGRVQEAYELLKKAFQ 430
             +IDG                 LC                  + G+++EA  L K A  
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  D + YT L+    K  +   A      ++   + PD   Y   I   C   K KE
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++ F  E    GL P + TY +MI  + R G  + A+K    M      P+ ITY  L++
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
           GL     +++A      M+  G SP  +T   +  + C Q      +     LD   W  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV-LQACSQSRRLDVI-----LDIHEWMM 686

Query: 609 -------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKY 660
                  I   NTL++ LC       A +   ++LG     D ++  AL    C  S+  
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 661 ALFSDLSQRIAEGI 674
             F+  +Q + + I
Sbjct: 747 NAFATYAQMLHQNI 760



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 205/446 (45%), Gaps = 14/446 (3%)

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA---ILDNATLT 262
           +A  V  EMC RGV  D  +   ++   CR G+V  A    +A+ DRG     LD     
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA----AALADRGGGIHALDVIGWN 173

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI  +C  G       A  + + M  +G   +V  +  L+ G C+ G  + A R  L +
Sbjct: 174 TLIAGYCRVG---DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAA-RGVLDM 229

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           ++     PNV TYT  I  YC+ + +  A  L E M   G+L +  T ++L+ G C+ G 
Sbjct: 230 MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGR 289

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  AY L   M K G  PN   Y  +ID L K GR +E   LL +   R +  D +TYT 
Sbjct: 290 FSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    KQ +T +        +   L+P+   YT LI A C+   + E+E+   E     
Sbjct: 350 LMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKS 409

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   T++S+I G+++ G +  A +Y + M + G  P+ +TYG LI G  K    D A 
Sbjct: 410 ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAAL 469

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTVN--TLIRKL 619
           + Y  M+ +G+   +    +L     + G    AM +  ++    L +  VN  TLI  L
Sbjct: 470 EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRV 645
                +  A  F  +L+ ++   D V
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAV 555



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 244/568 (42%), Gaps = 78/568 (13%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE------------------------- 208
           +++ EM   G+P    T+N ++   C  G V+ A                          
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYC 180

Query: 209 ---------EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                     V D M A+G+  D   Y  +V  +CR G+V  A   L  M + G   + A
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T T  I  +C  KG    +++AF+L E MVR G   +V T + L+ GLC+ G   +A+ L
Sbjct: 241 TYTPFIVYYCRTKG----VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ +     PN  TY  +I    K  +      LL  M  +G++ +  TYT+L+    
Sbjct: 297 FREMDKV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G  +   D +     +  +PN   Y  +ID LCK   V EA ++L +  ++ +  + +
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF---------------- 482
           T++ +++  +K+    +A      M + G+NP++  Y TLI  F                
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 483 ------------------CRQK-KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                              RQ  K++E+   F++A  +GL      YT++I G  + G++
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A K+ Q +      PD + Y   I+ LC   K  EA  F   M   G+ P + T  T+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C++G++A A+ +L  +     K  + T NTL+  L     V  A    ++++    
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQ 668
           +   ++   +  AC +S +  +  D+ +
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHE 683



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 184/398 (46%), Gaps = 39/398 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G+++E  ++  + + +GL L       ++    + G +  A +   E+
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  DA  Y + +   C +G+  EA  +L+ M + G   D +T   +I + C KG  
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG-- 603

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
               +A +LL EM     KPN+ T+  L+ GL   G  EKA  L  ++V S  + P    
Sbjct: 604 -ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV-SAGFSPSSLT 661

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++LE M 
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G+ P+T T+ +LI GHCK  + + A+     M  +  +PNI  +N ++ GL   GR+ 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L +  +  L+ + +TY IL + H KQ+   +A+ L+C MV  G  P +  Y  LI
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           + F +   M ++++ F++    G+ PT  TY  ++ G+
Sbjct: 842 SDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 4/378 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E A  +F +    G+  D  +Y  ++    + G +  A ++   ++DR  + D    
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C     G  K+A   L EM   G KP+  T+  +I   C+KG T KA +L L 
Sbjct: 558 NVFINCLC---MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL-LH 613

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++  + KPN+ TY  +++G      + +A+ LL  M   G  P++ T+  ++    +  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   D+ + M   G   +I  YN ++  LC  G  ++A  +L++     +  D IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  H K +    A   + +M+   ++P+I  + TL+       ++ E+     E   +
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P   TY  +  G+ +  N   A++ +  M   G  P   TY ALIS   K   + +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 562 CQFYESMIGKGISPCEVT 579
            + ++ M  +G+ P   T
Sbjct: 854 KELFKDMQKRGVHPTSCT 871



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 204/471 (43%), Gaps = 8/471 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +   + E   +++EM    +     T + V+    + GL++ A E    M  RG
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
           +  +  +Y  ++  + +      A      ML  G  ++   +  L+      G R  G 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV-----NGLRQNGK 499

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I++A  L ++    G   +   +T LIDGL K G    AF+ F + +   N  P+   Y 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK-FGQELMDRNMLPDAVVYN 558

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+  C   K   A+  L  M+  GL P+ +TY ++I  HC+ G   +A  L+  M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+  YN ++ GL   G V++A  LL +          +T+  +L    +       
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L +   M+ AGL+ DI  Y TL+   C     +++    +E + +G+ P   T+ ++I G
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + +  ++ +A   + +M     +P+  T+  L+ GL    ++ EA      M   G+ P 
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
            +T   LA  + KQ +   AM +   +  K ++  V+T    +    + GM
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 227/466 (48%), Gaps = 9/466 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +  +L+    M+ +M N GL     T   ++    E   VE A  + + M   G
Sbjct: 205 LIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               + S  ++V   C+ GR+ EA R++    + G   D  T   L+   C  G    IK
Sbjct: 265 CELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTG---HIK 319

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q  E+++ M+ KG++ +VYT+  LI GLCK G  ++A  +   +V  D  +PN  TY  +
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD-CEPNTVTYNTL 378

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CKE  +  A  L   +  +G+LP+  T+ SLI G C   N E A +L + M ++GC
Sbjct: 379 IGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC 438

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y+ +I+ LC + R++EA  LLK+        + + Y  L+    K      A  
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED 498

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F +M   G++     Y TLI   C+ K+++E+ +   + I  GL P K TYT+M+  + 
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFC 558

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+I  A    Q M   GC PD +TYG LI GLCK  ++D A +   S+  KG+     
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCS 621
               +    CK+  +  AM +   + +K     + T   + R LC+
Sbjct: 619 AYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCN 664



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 259/545 (47%), Gaps = 30/545 (5%)

Query: 107 LANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI 166
           L  +  S  ALS F WA     +     ++      L   G+F+    +++ M SS  +I
Sbjct: 66  LRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSS--KI 123

Query: 167 GRLKEGFSMVIEM--TNNGL-----PLI------------TSTLNRVVGIACELGLVEYA 207
              +  F + +E   T++ L     PL             T   N  + +  +   ++  
Sbjct: 124 PVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLV 183

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E +  +M A  V  D S++ +++ A C+  ++  A   L  M + G   D  T T L+  
Sbjct: 184 ETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQG 243

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           F ++     ++ A  + E MV  G +    +  VL++GLCK+G  E+A R    +   + 
Sbjct: 244 FIEEA---DVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF---IYEEEG 297

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P+  T+ A+++G C+   + +   +++ M E+G   +  TY SLI G CK+G  + A 
Sbjct: 298 FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAV 357

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +++  M    C PN   YN +I  LCK+  V+ A EL +    + +  D  T+  L+   
Sbjct: 358 EILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
              +  + A+ LF  M + G +PD   Y+ LI + C ++++KE+    +E   +G     
Sbjct: 418 CLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNV 477

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y ++I G  ++  +  A   F +M  +G +  ++TY  LI+GLCK  +++EA Q  + 
Sbjct: 478 VVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQ 537

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKR 624
           MI +G+ P + T  T+   +C+QGD   A  I++++     +  I T  TLI  LC   R
Sbjct: 538 MIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR 597

Query: 625 VGMAA 629
           V +A+
Sbjct: 598 VDVAS 602



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 191/413 (46%), Gaps = 6/413 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G  L + ++N +V   C+ G +E A     E    G C D  ++  +V   CR G 
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGH 317

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + +    +  ML++G  LD  T   LI+  C     G I +A E+L  MV +  +PN  T
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCK---LGEIDEAVEILHHMVSRDCEPNTVT 374

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  LI  LCK+   E A  L  +++ S    P+V T+ ++I G C       A  L E M
Sbjct: 375 YNTLIGTLCKENHVEAATEL-ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           KE+G  P+  TY+ LI   C     + A  L+  M   GC  N+  YN +IDGLCK  RV
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A ++  +     +    +TY  L++   K    ++A  L  +M+  GL PD   YTT+
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +  FC+Q  +K +    Q     G  P   TY ++I G  + G +  A K  + +   G 
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
                 Y  +I  LCK+ +  EA + +  M+ KG  P  +T   +    C  G
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 232/490 (47%), Gaps = 9/490 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +S   +  +LK   ++  +M  + +P   ST N ++   C+   +  A  + ++M   G+
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  ++  ++  +     V  A R    M++ G  L + ++ +L+   C +G    I++
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEG---RIEE 287

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A   + E   +G+ P+  T   L++GLC+ G  ++   + +  +    ++ +V+TY ++I
Sbjct: 288 ALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEM-MDFMLEKGFELDVYTYNSLI 344

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           SG CK  +++ A  +L  M  +   PNT TY +LI   CK  + E A +L  ++  +G  
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL 404

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  +N++I GLC     + A EL ++  ++    D+ TY+IL+     +   K+AL L
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALML 464

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M  +G   ++  Y TLI   C+  ++ ++E  F +    G+  +  TY ++I G  +
Sbjct: 465 LKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK 524

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  A +   +M   G  PD  TY  ++   C+Q  +  A    ++M   G  P  VT
Sbjct: 525 SKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVT 584

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             TL    CK G    A  +L S+  K   L  +  N +I+ LC  KR   A   F +++
Sbjct: 585 YGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMM 644

Query: 637 GKDQNVDRVS 646
            K    D ++
Sbjct: 645 EKGDPPDVIT 654



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 14/405 (3%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           N  L+LL+ A         +K    L  +MV     P+V T  +LI  LCK      A  
Sbjct: 168 NVALSLLVKA-------NKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAI- 219

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L L+ + +   +P+  T+T ++ G+ +E  +  A  + E M E G    + +   L+ G 
Sbjct: 220 LMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGL 279

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  E A  L  +  +EG  P+   +NA+++GLC+ G +++  E++    ++  + D 
Sbjct: 280 CKEGRIEEA--LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDV 337

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  L+S   K  E  +A+ +   MV     P+   Y TLI   C++  ++ + +  + 
Sbjct: 338 YTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARV 397

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + G+ P   T+ S+I G     N   A++ F+ M + GC PD  TY  LI  LC + +
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ---GDSATAMIILESLDKKLWIRTVNT 614
           L EA    + M   G +   V   TL    CK    GD+      +E L       T NT
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNT 517

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA-LKNACYESN 658
           LI  LC  KRV  AA    +++ +    D+ +    LK  C + +
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
             +   + L+++ F   ++ D   Y + LS  +K  + K    L  +MV   + PD+  +
Sbjct: 145 AEINPLFLLMERDFA--VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTF 202

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             LI A C+  +++ +    ++    GL P ++T+T+++ G++ + ++  A++  + M +
Sbjct: 203 NILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVE 262

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQF-YESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
            GC   +++   L++GLCK+ +++EA +F YE    +G  P +VT   L    C+ G   
Sbjct: 263 SGCELTSVSVNVLVNGLCKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIK 319

Query: 595 TAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
             + +++ + +K   L + T N+LI  LC    +  A    H ++ +D   + V+   L 
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379

Query: 652 NACYESNKYALFSDLSQ 668
               + N     ++L++
Sbjct: 380 GTLCKENHVEAATELAR 396



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 42/310 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S     RLKE   ++ EM  +G        N ++   C+   V  AE++FD+M   G
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V   + +Y  ++   C+  RV EA + +  M+  G   D  T T ++  FC +G    IK
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG---DIK 564

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW--------------------------- 311
           +A ++++ M   G +P++ T+  LI GLCK G                            
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624

Query: 312 --------TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE-KMNRAEMLLERMKEQG 362
                   T++A RLF +++   +  P+V TY  +  G C     +  A      M E+G
Sbjct: 625 QALCKRKRTKEAMRLFREMMEKGD-PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKG 683

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           +LP   ++  L  G C +   +    L++++ ++G      +  +II G  K  +  +A 
Sbjct: 684 ILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDAL 741

Query: 423 ELLKKAFQRE 432
             L     R+
Sbjct: 742 ANLGAILDRK 751



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 5/236 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R+      +++   +  R++E   ++ +M   GL     T   ++   C+ G ++ A ++
Sbjct: 510 RSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADI 569

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
              M   G   D  +Y  ++   C+ GRV  A + L ++  +G +L       +I A C 
Sbjct: 570 VQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCK 629

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
              R   K+A  L  EM+ KG  P+V T+ ++  GLC  G   +    F   +      P
Sbjct: 630 ---RKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              ++  +  G C     +    L+  + E+G    + + TS+I G  K+  F  A
Sbjct: 687 EFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRF--SQSETSIIRGFLKIQKFNDA 740


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 219/455 (48%), Gaps = 9/455 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M + G+     T N ++   C+   V+ AE VF +M  RGV  D  +Y  ++   C+  
Sbjct: 285 KMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQ 344

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +A+     M+D+G   DN T T++I   C      S+ +A  + ++M+ KG KPN  
Sbjct: 345 AIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQ---SVDRAEGVFQQMIDKGVKPNNG 401

Query: 298 THTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           T+  LI G    G W E   R+  K + + + +P+V TY  ++   CK  K N A  L +
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRI--KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M  +G+ P+   Y  +++G+ K G     +DL++LM   G +PN   +N +I    K+ 
Sbjct: 460 SMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRA 519

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            + E   +  K  Q+ L  + +TY  L+    K      A+  F +M+  G+ P+   + 
Sbjct: 520 MIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFN 579

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +L+   C   K ++ E+ F E +  G+ P    + +++C   ++G +  A +    M  +
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM 639

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD I+Y  LI G C  S++DEA +  + M+  G+ P  V+  TL + YCK G    A
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMA 628
             +   + +K     + T NT++  L    R   A
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 11/460 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V+ A  +F EM   GV  D  +Y  ++   C+   V  A+     M+++G   +N T 
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             +I   C       +  A  + ++MV KG KP+  T+  +IDGLCK    ++A  +F +
Sbjct: 264 NTIIDGLCKAQ---EVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++     KP+  TY  +I G CK + +++AE + ++M ++G+ P+  TYT +I G CK  
Sbjct: 321 MI-DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQ 379

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + +RA  +   M  +G  PN   YN +I G    G+ +E  + +K+    +L+ D  TY 
Sbjct: 380 SVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           +LL    K  +  +A  LF  M++ G+ P +  Y  ++  + ++  + E        +  
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P    + ++IC Y +   I   +  F +M Q G +P+ +TYG LI  LCK  ++D+A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIRK 618
              +  MI +G++P  V   +L Y  C          + LE L++ +    V  NT++  
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYES 657
           LC E RV  A      ++      D +S   L +  C+ S
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 213/439 (48%), Gaps = 15/439 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +C  SS   + R    F+ ++   +N +     T + V+G  C +G +E     F  +  
Sbjct: 57  KCSSSSKLAVSR----FNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILK 112

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADR-WLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            G   D      ++   C   RV EA    L  M + G  L   +   L+   CD   R 
Sbjct: 113 TGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCD---RR 169

Query: 276 SIKQAFELLEEMVR---KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             ++A ELL  MV        P+V ++ ++I+G   +G  +KA+ LFL++  S    P+V
Sbjct: 170 RAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS----PDV 225

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G CK ++++RAE + ++M E+G+ PN  TY ++I G CK    + A  +   
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQK 285

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  P+   YN IIDGLCK   V  A  + ++   R ++ D +TY  ++    K   
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A G+F +M+  G+ PD   YT +I   C+ + +  +E  FQ+ I  G+ P   TY  
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GYL  G     V+  + M+     PD  TYG L+  LCK  K +EA   ++SMI KG
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465

Query: 573 ISPCEVTRVTLAYEYCKQG 591
           I P       + + Y K+G
Sbjct: 466 IKPSVTIYGIMLHGYGKKG 484



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 195/418 (46%), Gaps = 8/418 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + G L E   ++  M  NG+       N V+    +  +++    +F +M  +G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKGFRGS 276
           +  +  +Y  ++ A C++GRV +A    + M++ G   +N     L+   C  DK     
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW---- 591

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            ++  EL  EM+ +G +P++     ++  LCK+G   +A RL   +V     KP+V +Y 
Sbjct: 592 -EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV-CMGLKPDVISYN 649

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+C   +M+ A  LL+ M   GL PN  +Y +L++G+CK G  + AY L   M ++
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G TP +  YN I++GL + GR  EA EL     +        TY+I+L    K     +A
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEA 769

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  +    L  DI  +  +I    +  + +++   F      GL P+  TY  +   
Sbjct: 770 FKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAEN 829

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            + +G++      F  M + G AP++    ALI  L  + ++  A  +   +  K  S
Sbjct: 830 LIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFS 887



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 237/577 (41%), Gaps = 48/577 (8%)

Query: 71  ESYYQQFHLRS-SPPRLNLQIDIDSLTHEQAIT----VVASLANEAGSMVALSFFYWAIG 125
           E  +QQ   R   P  +     ID L   QAI     V   + ++      L++     G
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374

Query: 126 FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
             K +   R   V    +I  G  +  +    C++  +   G+ +E    + EM+ + L 
Sbjct: 375 LCKAQSVDRAEGV-FQQMIDKG-VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T   ++   C+ G    A  +FD M  +G+    + Y +M+  Y + G ++E    
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L+ M+  G   ++     +I A+     R  I +   +  +M ++G  PNV T+  LID 
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAK---RAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549

Query: 306 LCKKG------------------------------------WTEKAFRLFLKLVRSDNYK 329
           LCK G                                    W EK   LFL+++ +   +
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW-EKVEELFLEML-NQGIR 607

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++  +  ++   CKE ++  A  L++ M   GL P+  +Y +LI GHC     + A  L
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +D M   G  PNI +YN ++ G CK GR+  AY L ++  ++ +     TY  +L+   +
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +A  L+  M+K+     I  Y+ ++  FC+     E+ K FQ   +  L     T
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIIT 787

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  MI G  + G    A+  F  +   G  P  +TY  +   L ++  L+E    +  M 
Sbjct: 788 FNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME 847

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             G +P       L  +   +G+   A   L  LD+K
Sbjct: 848 KSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 195/429 (45%), Gaps = 11/429 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +++NG     H +   ++ ++A+   + E   + I+M   GL     T   ++   C+LG
Sbjct: 496 MVANG-ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLG 554

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   GV  +   +  +V   C + +  + +     ML++G   D   + 
Sbjct: 555 RVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD---IV 611

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
              T  C+    G + +A  L++ MV  G KP+V ++  LIDG C     ++A +L   +
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KPN+ +Y  ++ GYCK  +++ A  L   M  +G+ P   TY +++ G  + G 
Sbjct: 672 V-SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M K     +I  Y+ I+DG CK     EA+++ +     +LQ D IT+ I
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K    + A+ LF  +   GL P +  Y  +      +  ++E +  F     +G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS------ 556
             P      ++I   L  G I  A  Y  ++++   + +  T   LIS   ++       
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAK 910

Query: 557 KLDEACQFY 565
            L E C+F+
Sbjct: 911 SLPEKCRFF 919


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 227/448 (50%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++G L E   +  +M +        T N ++   C+   +  A E   EM A G
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y   + A+C+ G + EA ++   M       +  T T LI A C  G   ++ 
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG---NLA 412

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L+EE+++ G K NV T+T L+DGLC++G  ++A  +F  ++ +    PN  TYTA+
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA-GVAPNQETYTAL 471

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+ K ++M  A+ +L+ MKE+ + P+   Y ++++G C     E A  L+  + + G 
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N   Y  ++D   K G+  EA  LL++     L A ++TY  L+    K    ++A+ 
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMH 591

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F RM + GL P++  YT L+   C+    + ++K F E +  G+ P K  YT++I G +
Sbjct: 592 HFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A+    RM +IG   D   Y ALI GL    ++ +A    + MIGKG+ P EV
Sbjct: 652 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 711

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
             + L  +Y   G    A+ +   + K+
Sbjct: 712 VYMCLIKKYYALGKVDEALELQNEMAKR 739



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 258/563 (45%), Gaps = 50/563 (8%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
           +AL FF WA G   F+H    Y +    L     +  A+ V++ ++     +    + F 
Sbjct: 114 LALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELIC-LRRVLPSWDVFD 172

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           ++    N  +P      + +     ELG++E A E F +M                    
Sbjct: 173 LLWATRNVCVPGF-GVFDALFSALIELGMLEEASECFLKM-------------------- 211

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  RV    R  +A+L R                  K  RG + + F   ++M   G K 
Sbjct: 212 RKFRVFPKPRSCNALLHR----------------LSKVGRGDLSRKF--FKDMGAAGIKR 253

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+ ++ID LCK+G  E A  LF ++ +   + P++ TY ++I G+ K   ++    +
Sbjct: 254 SVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICI 312

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            E+MK+    P+  TY +LI   CK     +A++ +  M   G  PN+  Y+  ID  CK
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G +QEA +      +  L  ++ TYT L+  + K     +AL L   +++AG+  ++  
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT L+   C + +MKE+E+ F+  + AG+ P +ETYT+++ G+++   +  A    + M 
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +    PD + YG ++ GLC +S+L+EA      +   GI+   V   TL   Y K G + 
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 595 TAMIILES-LDKKLWIRTVN--TLIRKLCSEKRVGMAALFFHKL--LGKDQNVDRVSL-- 647
            A+ +LE  LD  L    V    LI  LC    V  A   F ++  +G   NV   +   
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 648 -AALKNACYESNKYALFSDLSQR 669
               KN C+E  K  LF ++  +
Sbjct: 613 DGLCKNNCFEVAK-KLFDEMLDK 634



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 193/415 (46%), Gaps = 4/415 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  R+ + F  + EM  NGL     T +  +   C+ G+++ A + F +M    
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C+ G + EA + +  +L  G  L+  T T L+   C++G    +K
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG---RMK 447

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+   M+  G  PN  T+T L+ G  K    E A +  LK ++    KP++  Y  +
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA-KDILKEMKEKCIKPDLLLYGTI 506

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C E ++  A++L+  +KE G+  N   YT+L+  + K G    A  L++ M   G 
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                 Y A+IDGLCK G VQEA     +  +  LQ +   YT L+    K    + A  
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+  G+ PD  AYT LI    +   ++E+       I  G+      YT++I G  
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
             G +  A      M   G  PD + Y  LI       K+DEA +    M  +G+
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 39/89 (43%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L+E  ++   M   G+ L       ++      G V+ A  + DEM  +GV  D   Y
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
             ++  Y  +G+V EA    + M  RG I
Sbjct: 714 MCLIKKYYALGKVDEALELQNEMAKRGMI 742


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 23/427 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G  +D    T L+ 
Sbjct: 84  ADEVTPNLC---------TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC +  +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY+S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRK 618
           +++E MI + +SP  +   +L +  C   + D A  + ILE LD+ + + T+  N++I  
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL-ILEMLDRGICLDTIFFNSIIDS 488

Query: 619 LCSEKRV 625
            C E RV
Sbjct: 489 HCKEGRV 495



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +    EM + G+     T + ++   C+   ++ A EV   M   G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +V  YC  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG---RCT 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL P+T TY ++I   CK G  E A    + M  E  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I  LC   +  +A EL+ +   R +  D I +  ++  H K+    ++  
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y+TLI  +C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 233/511 (45%), Gaps = 80/511 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           ++G  C  G ++        +  +G   DA ++  ++   C   R ++A D  L  M   
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKG 310
           G I +  +  +L+   CD+      ++A ELL+ M   G    P+V ++T +I+G  K+G
Sbjct: 157 GCIPNVFSYNILLKGLCDENRS---QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+  + +++      PNV TY+++I+  CK + M++A  +L  M + G++PN  TY
Sbjct: 214 DLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++     +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 431 RELQADKITY-----------------------------------TILLSEHLKQAETKQ 455
           R L+ +  TY                                   +IL+  + KQ +  Q
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI- 514
           A+ +F +M + GLNPD   Y T+I   C+  +++++ ++F++ I   L P    Y S+I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 515 -----------------------C-----------GYLRDGNISSAVKYFQRMNQIGCAP 540
                                  C            + ++G +  + K F  M +IG  P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   YCK      A+++ 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
             +ES      I T N +++ L   +R   A
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAA 603



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 8/495 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNCR-TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +G    + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQG---KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  +   P    Y ++I   C  +K ++A+ L+  M ++G+  +T  + S+I  HCK 
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    +  L DLM + G  P+I  Y+ +IDG C  G++ EA +LL       ++ D +TY
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++ +     
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L K  + DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           A   + ++   G+ P   T   +A    +QG       +  S+++       R +N+++R
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 618 KLCSEKRVGMAALFF 632
           KL     +  A  + 
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 15/277 (5%)

Query: 374 IYG-HCKVGNFER--------AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           IYG +C + +  R         Y+ M   G +  TPN+  Y  +I   C  GR+   +  
Sbjct: 54  IYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA 113

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFC 483
           L    ++  + D I +T LL        T  A+ +   RM + G  P++ +Y  L+   C
Sbjct: 114 LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173

Query: 484 RQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            + + +E+ +  Q     G    P   +YT++I G+ ++G++  A   +  M   G  P+
Sbjct: 174 DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY ++I+ LCK   +D+A +   SM+  G+ P   T  ++ + YC  G    A+  L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +     +  + T N+L+  LC   R   A   F  +
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 23/427 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G I+D    T ++ 
Sbjct: 84  ADEVTPNLC---------TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC    +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY+S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRK 618
           +++E MI + +SP  +   +L +  C   + D A  + ILE LD+ + + T+  N++I  
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL-ILEMLDRGICLDTIFFNSIIDS 488

Query: 619 LCSEKRV 625
            C E RV
Sbjct: 489 HCKEGRV 495



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +    EM + G+     T + ++   C+   ++ A EV   M   G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +V  YC  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG---RCT 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL P+T TY ++I   CK G  E A    + M  E  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I  LC   +  +A EL+ +   R +  D I +  ++  H K+    ++  
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y+TLI  +C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 232/511 (45%), Gaps = 80/511 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           ++G  C  G ++        +  +G   DA ++  M+   C   R ++A D  L  M   
Sbjct: 97  LMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKG 310
           G I +  +  +L+   CD       ++A ELL+ M   G    P+V ++T +I+G  K+G
Sbjct: 157 GCIPNVFSYNILLKGLCDDNRS---QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+  + +++      PNV TY+++I+  CK + M++A  +L  M + G++PN  TY
Sbjct: 214 DLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++     +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 431 RELQADKITY-----------------------------------TILLSEHLKQAETKQ 455
           R L+ +  TY                                   +IL+  + KQ +  Q
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI- 514
           A+ +F +M + GLNPD   Y T+I   C+  +++++ ++F++ I   L P    Y S+I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 515 -----------------------C-----------GYLRDGNISSAVKYFQRMNQIGCAP 540
                                  C            + ++G +  + K F  M +IG  P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   YCK      A+++ 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
             +ES      I T N +++ L   +R   A
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAA 603



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 8/495 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNCR-TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +G    + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQG---KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  +   P    Y ++I   C  +K ++A+ L+  M ++G+  +T  + S+I  HCK 
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    +  L DLM + G  P+I  Y+ +IDG C  G++ EA +LL       ++ D +TY
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++ +     
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L K  + DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           A   + ++   G+ P   T   +A    +QG       +  S+++       R +N+++R
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 618 KLCSEKRVGMAALFF 632
           KL     +  A  + 
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 15/277 (5%)

Query: 374 IYG-HCKVGNFER--------AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           IYG +C + +  R         Y+ M   G +  TPN+  Y  ++   C  GR+   +  
Sbjct: 54  IYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAA 113

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFC 483
           L    ++    D I +T +L        T  A+ +   RM + G  P++ +Y  L+   C
Sbjct: 114 LGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173

Query: 484 RQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
              + +E+ +  Q     G    P   +YT++I G+ ++G++  A   +  M   G  P+
Sbjct: 174 DDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY ++I+ LCK   +D+A +   SM+  G+ P   T  ++ + YC  G    A+  L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +     +  + T N+L+  LC   R   A   F  +
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 212/417 (50%), Gaps = 11/417 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFR 274
           A  V  D  +Y +++   CR GR+      L  ++ +G  +D    T L+   C DK   
Sbjct: 80  ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK--- 136

Query: 275 GSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPN 331
                A ++ L  M   G  PNV+++ +L+ GLC +  +++A  L   +   R     P+
Sbjct: 137 -RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V +YT +I+G+ KE   ++A      M ++G+LP+  TY S+I   CK    ++A ++++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K G  P+   YN+I+ G C  G+ +EA   LKK     ++ D +TY++L+    K  
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G+ P    ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +IC Y + G +  A+  F +M Q G  P+ +TYGA+I  LCK  ++++A  ++E MI +
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 572 GISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
           G+SP  +   +L +  C       A  +ILE LD+ + + T+  N++I   C E RV
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 229/477 (48%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM + G+     T N ++   C+   ++ A EV + M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  YC  G+  EA  +L  M   G   D  T +LL+   C  G      
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG---RCM 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   P+ + ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSIL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL PN  TY ++I   CK G  E A    + M  EG 
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I GLC   + + A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ P++  Y TLI  +C   KM E+ K     ++ GL P   TY+++I GY 
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   + +  CK   +  A+ + ++L   D KL  RT N +I  L    R   A   F
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 206/421 (48%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDRG + D  T   +I A C      ++
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ---AM 247

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  P+  T+  ++ G C  G  ++A   FLK +RSD  +P+V TY+ 
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG-FLKKMRSDGVEPDVVTYSL 306

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK  +   A  + + M ++GL P   TY +L+ G+   G     + L+DLM + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ Y ++ +I    K+G+V +A  +  K  Q+ L  + +TY  ++    K    + A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+  GL+P    Y +LI   C   K + +E+   E +  G+      + S+I  +
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G +  + K F+ M +IG  P+ ITY  LI+G C   K+DEA +    M+  G+ P  
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 578 VTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT  TL   YCK      A+++   +ES      I T N +++ L   +R   A   + +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 635 L 635
           +
Sbjct: 607 I 607



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 219/472 (46%), Gaps = 26/472 (5%)

Query: 149 FERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
            ++A EV+  MV +               +   G+ KE    + +M ++G+     T + 
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D+   ++LI A+  +G    + QA  +  +M ++G  PN  T+  +I  LCK G  E
Sbjct: 367 IHPDHYVFSILICAYAKQG---KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A   F +++  +   P    Y ++I G C   K  RAE L+  M ++G+  NT  + S+
Sbjct: 424 DAMLYFEQMI-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  HCK G    +  L +LM + G  PN+  YN +I+G C  G++ EA +LL       L
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + +TY+ L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            +     +G      TY  ++ G  ++     A++ FQ +  +    +  T+  +I  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           K  + DEA   + +    G+ P   T   +A     QG       +LE LD+
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG-------LLEELDQ 707



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 181/393 (46%), Gaps = 5/393 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H V   ++ ++A+ G++ +   +  +M   GL     T   V+GI C+ G
Sbjct: 362 MVRNG-IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            VE A   F++M   G+      Y  ++   C   +   A+  +  MLDRG  L+     
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I + C +   G + ++ +L E MVR G KPNV T+  LI+G C  G  ++A +L   +
Sbjct: 481 SIIDSHCKE---GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KPN  TY+ +I+GYCK  +M  A +L + M+  G+ P+  TY  ++ G  +   
Sbjct: 538 V-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L   + + G    +  YN I+ GLCK     +A ++ +     +L+ +  T+ I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK     +A  LF      GL P+   Y  +      Q  ++E ++ F      G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
                     ++   L+ G I+ A  Y   +++
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 184/398 (46%), Gaps = 13/398 (3%)

Query: 274 RGSIKQAFELLEEMVRKGWK---PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           R S   A      M R G     P++ T+ +LI   C+ G  +  F     +++   ++ 
Sbjct: 62  RDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKK-GFRV 120

Query: 331 NVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           +   +T ++ G C +++ + A +++L RM E G +PN  +Y  L+ G C     + A +L
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180

Query: 390 MDLMGKE---GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + +M  +   G  P++ +Y  +I+G  K+G   +AY    +   R +  D +TY  +++ 
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K     +A+ +   MVK G+ PD   Y +++  +C   + KE+  F ++  + G+ P 
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 507 KETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
             TY S++  YL ++G    A K F  M + G  P+  TYG L+ G   +  L E     
Sbjct: 301 VVTY-SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
           + M+  GI P       L   Y KQG    AM++   + ++       T   +I  LC  
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            RV  A L+F +++ +  +   +   +L +     NK+
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 39/306 (12%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM + G+ L T   N ++   C+ G V  +E++F+ M   GV  +  +Y  ++  YC
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             G++ EA + LS M+  G   +  T + LI  +C       ++ A  L +EM   G  P
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS---RMEDALVLFKEMESSGVSP 579

Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
           ++ T+ +++ GL                                   CK   T+ A ++F
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             L   D  K    T+  MI    K  + + A+ L       GL+PN  TY  +      
Sbjct: 640 QNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E    L   M   GCT +    N I+  L ++G +  A   L    ++    +  T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758

Query: 440 YTILLS 445
            ++ + 
Sbjct: 759 ASLFID 764


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 252/614 (41%), Gaps = 86/614 (14%)

Query: 140 ATSLISNGNFERAHEVM--QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           A +L   G    A +V+    +++ +  +G      S+   MT  GLP+     N +V  
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
            C  G V+ A  V D M   GV  + ++Y   +V YCR   V EA      M+  G +LD
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 258 NATLTLLITAFCDKG--------FR------------------------GSIKQAFELLE 285
             TL+ L+   C  G        FR                        G  K+   LL 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EMV +G   ++ T+T L+D L K+G T++  +  L+   SDN  PN  TYT +I   CK 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEV-KDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             ++ AE +L  M+E+ + PN  T++S+I G  K G  ++A +   +M + G  PN+  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 406 NAIIDG-----------------LC------------------KKGRVQEAYELLKKAFQ 430
             +IDG                 LC                  + G+++EA  L K A  
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  D + YT L+    K  +   A      ++   + PD   Y   I   C   K KE
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++ F  E    GL P + TY +MI  + R G  + A+K    M      P+ ITY  L++
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
           GL     +++A      M+  G SP  +T   +  + C Q      +     LD   W  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV-LQACSQSRRLDVI-----LDIHEWMM 686

Query: 609 -------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKY 660
                  I   NTL++ LC       A +   ++LG     D ++  AL    C  S+  
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 661 ALFSDLSQRIAEGI 674
             F+  +Q + + I
Sbjct: 747 NAFATYAQMLHQNI 760



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 205/446 (45%), Gaps = 14/446 (3%)

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA---ILDNATLT 262
           +A  V  EMC RGV  D  +   ++   CR G+V  A    +A+ DRG     LD     
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA----AALADRGGGIHALDVIGWN 173

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI  +C  G       A  + + M  +G   +V  +  L+ G C+ G  + A R  L +
Sbjct: 174 TLIAGYCRVG---DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAA-RGVLDM 229

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           ++     PNV TYT  I  YC+ + +  A  L E M   G+L +  T ++L+ G C+ G 
Sbjct: 230 MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGR 289

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  AY L   M K G  PN   Y  +ID L K GR +E   LL +   R +  D +TYT 
Sbjct: 290 FSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    KQ +T +        +   L+P+   YT LI A C+   + E+E+   E     
Sbjct: 350 LMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKS 409

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   T++S+I G+++ G +  A +Y + M + G  P+ +TYG LI G  K    D A 
Sbjct: 410 ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAAL 469

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTVN--TLIRKL 619
           + Y  M+ +G+   +    +L     + G    AM +  ++    L +  VN  TLI  L
Sbjct: 470 EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRV 645
                +  A  F  +L+ ++   D V
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAV 555



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 244/568 (42%), Gaps = 78/568 (13%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE------------------------- 208
           +++ EM   G+P    T+N ++   C  G V+ A                          
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYC 180

Query: 209 ---------EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                     V D M A+G+  D   Y  +V  +CR G+V  A   L  M + G   + A
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T T  I  +C  KG    +++AF+L E MVR G   +V T + L+ GLC+ G   +A+ L
Sbjct: 241 TYTPFIVYYCRTKG----VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ +     PN  TY  +I    K  +      LL  M  +G++ +  TYT+L+    
Sbjct: 297 FREMDKV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G  +   D +     +  +PN   Y  +ID LCK   V EA ++L +  ++ +  + +
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF---------------- 482
           T++ +++  +K+    +A      M + G+NP++  Y TLI  F                
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 483 ------------------CRQK-KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                              RQ  K++E+   F++A  +GL      YT++I G  + G++
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A K+ Q +      PD + Y   I+ LC   K  EA  F   M   G+ P + T  T+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C++G++A A+ +L  +     K  + T NTL+  L     V  A    ++++    
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQ 668
           +   ++   +  AC +S +  +  D+ +
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHE 683



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 39/425 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G+++E  ++  + + +GL L       ++    + G +  A +   E+
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  DA  Y + +   C +G+  EA  +L+ M + G   D +T   +I + C KG  
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG-- 603

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
               +A +LL EM     KPN+ T+  L+ GL   G  EKA  L  ++V S  + P    
Sbjct: 604 -ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV-SAGFSPSSLT 661

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++LE M 
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G+ P+T T+ +LI GHCK  + + A+     M  +  +PNI  +N ++ GL   GR+ 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L +  +  L+ + +TY IL + H KQ+   +A+ L+C MV  G  P +  Y  LI
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F++    G+ PT  TY  ++ G+ R  N +   K  + M + G +
Sbjct: 842 SDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901

Query: 540 PDNIT 544
           P   T
Sbjct: 902 PSKGT 906



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 4/378 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E A  +F +    G+  D  +Y  ++    + G +  A ++   ++DR  + D    
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C     G  K+A   L EM   G KP+  T+  +I   C+KG T KA +L L 
Sbjct: 558 NVFINCLC---MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL-LH 613

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++  + KPN+ TY  +++G      + +A+ LL  M   G  P++ T+  ++    +  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   D+ + M   G   +I  YN ++  LC  G  ++A  +L++     +  D IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  H K +    A   + +M+   ++P+I  + TL+       ++ E+     E   +
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P   TY  +  G+ +  N   A++ +  M   G  P   TY ALIS   K   + +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 562 CQFYESMIGKGISPCEVT 579
            + ++ M  +G+ P   T
Sbjct: 854 KELFKDMQKRGVHPTSCT 871



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 204/471 (43%), Gaps = 8/471 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +   + E   +++EM    +     T + V+    + GL++ A E    M  RG
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
           +  +  +Y  ++  + +      A      ML  G  ++   +  L+      G R  G 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV-----NGLRQNGK 499

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I++A  L ++    G   +   +T LIDGL K G    AF+ F + +   N  P+   Y 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK-FGQELMDRNMLPDAVVYN 558

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+  C   K   A+  L  M+  GL P+ +TY ++I  HC+ G   +A  L+  M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+  YN ++ GL   G V++A  LL +          +T+  +L    +       
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L +   M+ AGL+ DI  Y TL+   C     +++    +E + +G+ P   T+ ++I G
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + +  ++ +A   + +M     +P+  T+  L+ GL    ++ EA      M   G+ P 
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
            +T   LA  + KQ +   AM +   +  K ++  V+T    +    + GM
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 239/506 (47%), Gaps = 9/506 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           Q + S    +      F+ ++ M N   P+     N+++    +L     A     +M  
Sbjct: 35  QPLPSFIDNVDDAVSSFNHILHMRNPVQPIFE--FNKILSSLVKLNHFHTAISFSKQMEL 92

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           + +  D  ++ +++  +C +G +  A   L+ +   G   D  T+T LI   C     G 
Sbjct: 93  KQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLC---LNGK 149

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +++A    ++++ KG+  +  ++  LI+GLCK G T  A ++ L+ +     +PNV  Y 
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQV-LRKIDGLLVQPNVVMYN 208

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK++ +  A  L   M  + + P+  TYT+LIYG   VG  + A  L + M  +
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++Y +N ++DGLCK+G +++A  +L    ++ + ++ +TY  L+  +    +  +A
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M + G+ PD+ +Y+ +I   C+ K + E+   F+E  +  + P   TY S+I G
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            L+ G IS A      M+  G   D ITY +L+  LCK  ++D+A      +  +GI P 
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPN 448

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
             T   L    CK G    A  + + L  K   L ++  N ++  LC E     A     
Sbjct: 449 IYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVS 508

Query: 634 KLLGKDQNVDRVSLAALKNACYESNK 659
           K+       D V+   L  A +E++K
Sbjct: 509 KMEDNGCIPDAVTYETLVRALFENDK 534



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 224/495 (45%), Gaps = 53/495 (10%)

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG 172
           S+V L+ F+ AI F+K     ++     T                 +++ F  +G L   
Sbjct: 73  SLVKLNHFHTAISFSKQMELKQIQPDLFT--------------FNILINCFCHLGHLNFA 118

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           FS++ ++   G    T T+  ++   C  G V  A    D++ A+G   D  SY  ++  
Sbjct: 119 FSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLING 178

Query: 233 YCRMGR-----------------------------------VTEADRWLSAMLDRGAILD 257
            C+ G                                    V  A    S M+ +    D
Sbjct: 179 LCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPD 238

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T T LI         G +K+A  L  +M+ K  KP+VYT  +L+DGLCK+G  +KA R
Sbjct: 239 VVTYTTLIYGCL---IVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKA-R 294

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
             L ++       N+ TY +++ GY   ++ N+A  +   M  +G+ P+  +Y+ +I G 
Sbjct: 295 NVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGL 354

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK    + A +L   M  +   PN   YN++IDGL K GR+ +A++L+ +   R   AD 
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY+ LL    K  +  +A+ L  ++   G+ P+I+ YT L+   C+  ++K+++  +Q+
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  G     + Y  M+ G  ++G    A+    +M   GC PD +TY  L+  L +  K
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534

Query: 558 LDEACQFYESMIGKG 572
            D+A +    MI +G
Sbjct: 535 NDKAVKLLREMIVQG 549



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 164/366 (44%), Gaps = 10/366 (2%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   F  ++   N    +  +  ++S   K    + A    ++M+ + + P+  T+ 
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C +G+   A+ ++  + K G  P+      +I GLC  G+V+EA         +
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D+++Y  L++   K  ET+ AL +  ++    + P++  Y T+I + C+ K +  +
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                E I   +FP   TYT++I G L  G +  AV  F +M      PD  T+  L+ G
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTL--AYEYCKQGDSATAMIILESLDKKLW- 608
           LCK+ ++ +A      MI +G+    VT  +L   Y   KQ + AT   +  ++ ++   
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT--FVFNTMARRGVT 341

Query: 609 --IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
             +++ + +I  LC  K V  A   F ++  K    + V+  +L +      KY   SD 
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL---KYGRISDA 398

Query: 667 SQRIAE 672
              + E
Sbjct: 399 WDLVNE 404


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 21/427 (4%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           ++  AE  ++EM   GV  +  +        C +G+  +A   +  M+ +G I D++T +
Sbjct: 67  VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   C+      +++AF+L +EM R G  P+VYT+T L+D  CK G  E+A   F ++
Sbjct: 127 KVIGYLCNAS---KVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            + D   PNV TYTA+I  Y K  K++RA  + E M   G +PN  TYT+LI GHCK G 
Sbjct: 184 -QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 383 FERA-----------YDLMD------LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
            E+A            D+ D      ++  E   PN+  Y A++DGLCK  +V+EA +LL
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +       + ++I Y  L+    K  +  +A  +F +M+  G +P+++ Y++LI    + 
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           K++  + K   + +     P    YT M+ G  + G    A +    M + GC P+ +TY
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            A+I G  K  ++D   +  + M  KG +P  +T   L    C  G    A  +LE + +
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482

Query: 606 KLWIRTV 612
             W + +
Sbjct: 483 TYWPKHI 489



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 198/419 (47%), Gaps = 54/419 (12%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           IG+ ++ ++++ EM + G    +ST ++V+G  C    VE A ++F EM   G+  D  +
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYT 159

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++  +C++G + +A  W   M   G   +  T T LI A+        + +A E+ E
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR---KLSRANEIFE 216

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF----------------LKLVRSDNYK 329
            M+  G  PN+ T+T LIDG CK G TEKA +++                 ++V S+  +
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV TY A++ G CK  K+  A  LLE M  +G  PN   Y +LI G CKVG  + A ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   GC+PN+Y Y+++ID L K  R+  A ++L K  +     + + YT ++    K
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +T +A  L   M + G  P++  YT +I  F +                         
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKA------------------------ 432

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
                      G +   ++  Q M   GCAP+ ITY  LI+  C    LD+A +  E M
Sbjct: 433 -----------GRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 175/379 (46%), Gaps = 33/379 (8%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +G  P+      L+   C+ G    A++L  K+V    Y+P    Y  +I G C  E
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVIC-GYQPGYVVYNILIGGICSTE 60

Query: 347 KMNRAEM--LLER----MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            +   E+  L ER    M E G++ N     +     C +G FE+AY+++  M  +G  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +   Y+ +I  LC   +V++A++L ++  +  +  D  TYT LL    K    +QA   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M + G  P++  YT LI A+ + +K+  + + F+  ++ G  P   TYT++I G+ + 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 521 GNISSAVKYFQRMNQIGC-----------------APDNITYGALISGLCKQSKLDEACQ 563
           G    A + + RM                       P+ +TYGAL+ GLCK  K+ EA  
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW------IRTVNTLIR 617
             E+M  +G  P ++    L   +CK G    A    E   K L       + T ++LI 
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQ---EVFTKMLGHGCSPNVYTYSSLID 357

Query: 618 KLCSEKRVGMAALFFHKLL 636
           KL  +KR+ +A     K+L
Sbjct: 358 KLFKDKRLDLALKVLTKML 376



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 170/380 (44%), Gaps = 44/380 (11%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V+ A ++ + M   G   +   Y  ++  +C++G++ EA    + M
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           L  G   +  T + LI    DK F+   +  A ++L +M+     PNV  +T ++DGLCK
Sbjct: 341 LGHGCSPNVYTYSSLI----DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G T++A+RL L +     Y PNV TYTAMI G+ K  +++R   LL+ M  +G  PN  
Sbjct: 397 VGKTDEAYRLMLMMEEKGCY-PNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY  LI   C  G  + A+ L++ M +     +I  Y  +I+G                 
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEG----------------- 498

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
           F  E  A                    +LGL   + + G  P +  Y  LI  F +  ++
Sbjct: 499 FSHEFVA--------------------SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRL 538

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           + + +  +E +++     + TY S+I        +  A K +  M + G  P+      L
Sbjct: 539 EMALELHEE-LSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCL 597

Query: 549 ISGLCKQSKLDEACQFYESM 568
           I GL +  K +EA Q  +S+
Sbjct: 598 IKGLLRVGKWEEALQLSDSI 617



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 42/273 (15%)

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL-----SE 446
           +M  EGC P+   +N+++   C+ G    AY+LLKK      Q   + Y IL+     +E
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 447 HLKQAET------------------------------------KQALGLFCRMVKAGLNP 470
            L   E                                     ++A  +   M+  G  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   Y+ +I   C   K++++ + FQE    G+ P   TYT+++  + + G I  A  +F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M Q GCAP+ +TY ALI    K  KL  A + +E M+  G  P  VT   L   +CK 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 591 GDSATAMIILESL-DKKLWIRTVNTLIRKLCSE 622
           G++  A  I   + + K+ I  V+   R + SE
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSE 273



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 127/312 (40%), Gaps = 36/312 (11%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++  F ++G+L E   +  +M  +G      T + ++    +   ++ A +V  +M
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  MV   C++G+  EA R +  M ++G   +  T T +I  F   G  
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF---GKA 432

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  ELL+ M  KG  PN  T+ VLI+  C  G  + A +L L+ ++   +  ++  
Sbjct: 433 GRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKL-LEEMKQTYWPKHIGM 491

Query: 335 YTAMISGYCKE------------------------------EKMNRAEMLLERMKEQGLL 364
           Y  +I G+  E                               K  R EM LE  +E    
Sbjct: 492 YRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551

Query: 365 PNT--NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
                NTY SLI         ++A+ L   M + G  P +     +I GL + G+ +EA 
Sbjct: 552 SAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEAL 611

Query: 423 ELLKKAFQRELQ 434
           +L     Q ++ 
Sbjct: 612 QLSDSICQMDIH 623


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 210/396 (53%), Gaps = 5/396 (1%)

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC-ADASSYKLMVVAYCRMGRV 239
           +N   +   +L  V+ + C  G VE A+E+ DEM  +G+   +  +Y  ++ AY      
Sbjct: 209 SNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDR 268

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
              D  L  M     +   AT ++LI  +   G    I++A ++ EEM  K  + +VY +
Sbjct: 269 KGVDEILKLMEKEQVVFSVATYSILIQWYSSSG---DIEEAEKIFEEMREKNIEMDVYVY 325

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           + +I    + G  ++AF LF ++ + D   PN HTY A+I G CK  +M  AE+LL  M+
Sbjct: 326 SSMISWSRRLGNMKRAFALFDEMSQRD-IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQ 384

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+  N   + + + G+C+ G  + A  L  +M K+G   +++ YN + +GLCK  R  
Sbjct: 385 SKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYD 444

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L    ++ ++ + +T+T+ +  + K+    +A  LF  M K G  P+I  Y TLI
Sbjct: 445 EAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI 504

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            A+C+++K+K++ K   E I  GL P   TY+S+I G    G +  A+K F  M   G  
Sbjct: 505 DAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGIT 564

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +  TY ++ISGL K+ + DEA + Y+ M+  G+ P
Sbjct: 565 RNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIP 600



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 213/432 (49%), Gaps = 9/432 (2%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAF 268
           V+D +  +G+  +  S  ++++A  R G V    R+   M++     +   +LTL+I   
Sbjct: 167 VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVL 226

Query: 269 CDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           C    RG +++A EL++EMV KG  KPNV+T+  L++    +    K     LKL+  + 
Sbjct: 227 CR---RGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRK-DRKGVDEILKLMEKEQ 282

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              +V TY+ +I  Y     +  AE + E M+E+ +  +   Y+S+I    ++GN +RA+
Sbjct: 283 VVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAF 342

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L D M +    PN + Y A+I G+CK G+++ A  LL +   + +  + + +   +  +
Sbjct: 343 ALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGY 402

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++ +  +AL L   M K G+N D+  Y  L    C+  +  E++      +  G+ P  
Sbjct: 403 CRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNV 462

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+T  I  Y ++GN++ A + F+ M + G  P+ ITY  LI   CK+ K+ +A +    
Sbjct: 463 VTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSE 522

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKR 624
           MI KG+ P   T  +L +  C  G    A+ +   +  K   R V T   +I  L  E R
Sbjct: 523 MINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGR 582

Query: 625 VGMAALFFHKLL 636
              A   + +++
Sbjct: 583 ADEAFKLYDEMM 594


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 215/447 (48%), Gaps = 10/447 (2%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++ + C  G VE A ++FDEM +     D  +Y +++  YC +G +  A + L  M+ 
Sbjct: 266 NILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVA 322

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG   +    T ++   CDKG    +  A  ++E+MV      +   +T ++ G C KG 
Sbjct: 323 RGVEPNATVYTSVVALLCDKG---RVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A R F ++ R       V TYT +I+G C+  ++  AE +L+ M  + L  +  TYT
Sbjct: 380 LVSARRWFDEMQRKGLATDGV-TYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            L+ G+CK G    A+ + + M + G  PN+  Y A+ DGLCK+G VQ A ELL +   +
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L+ +  TY  L++   K     QA+     M  AGL PD++ YTTLI A C+  ++  +
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               QE +  G+ PT  TY  ++ G+   G +    K  + M +    P+  TY +L+  
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LW 608
            C  + +    + Y+ M  + + P E T   L   +CK      A      + +K   L 
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLT 678

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             + + LIR L  +K+   A   FH +
Sbjct: 679 ASSYSALIRLLNKKKKFVEARKLFHDM 705



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 203/416 (48%), Gaps = 4/416 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +  +G L+    ++ +M   G+    +    VV + C+ G V  A  V ++M    
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D + Y  ++  +C  G +  A RW   M  +G   D  T T LI   C  G    +K
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG---ELK 416

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L+EM+ +    +  T+TVL+DG CK+G   +AF++   +V+     PNV TYTA+
Sbjct: 417 EAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQR-GVAPNVVTYTAL 475

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
             G CK+  +  A  LL  M  +GL  N  TY SLI G CK G  ++A   M  M   G 
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++Y Y  +ID LCK G +  A++LL++     ++   +TY +L++        +    
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M++  ++P+   Y +L+  +C    MK + + ++   +  + P + TY  +I G+ 
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHC 655

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +  ++  A  +   M + G      +Y ALI  L K+ K  EA + +  M  +G +
Sbjct: 656 KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFT 711



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 204/419 (48%), Gaps = 4/419 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V+   + GR+ +  ++V +M ++ + L  +    V+   C  G +  A   FDEM
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+  D  +Y  ++   CR G + EA++ L  ML R   +D  T T+L+  +C    R
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK---R 447

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +AF++   MV++G  PNV T+T L DGLCK+G  + A  L L  + +   + N  T
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANEL-LHEMSNKGLELNACT 506

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y ++I+G CK   +++A   +  M   GL P+  TYT+LI   CK G  +RA+DL+  M 
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  P I  YN +++G C  GRV+   +LL+   ++ +  +  TY  L+ ++      K
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
               ++  M    + P+ + Y  LI   C+ + MKE++ F  E I  G   T  +Y+++I
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
               +      A K F  M + G   +   Y   I     +  L+      + ++   I
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 176/385 (45%), Gaps = 46/385 (11%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A EL + +  K    NV ++ +L+  LC  G  E A +LF ++       P+V 
Sbjct: 244 RLPLDEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMASP----PDVV 295

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI------------------- 374
           TY  +I GYC   ++  A  LL+ M  +G+ PN   YTS++                   
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355

Query: 375 ----------------YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                            G C  G+   A    D M ++G   +   Y  +I+GLC+ G +
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA ++L++   R L  D++TYT+L+  + K+ +  +A  +   MV+ G+ P++  YT L
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
               C+Q  ++ + +   E    GL     TY S+I G  + G +  A++    M+  G 
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  LI  LCK  +LD A    + M+  GI P  VT   L   +C  G       
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 599 ILE-SLDKKLWIR--TVNTLIRKLC 620
           +LE  L+K +     T N+L+++ C
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYC 620



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 4/349 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G LKE   ++ EM    L +   T   +V   C+ G +  A +V + M  RG
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +    C+ G V  A+  L  M ++G  L+  T   LI   C  G+   + 
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY---LD 521

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA   + +M   G KP+VYT+T LID LCK G  ++A  L  +++  +  KP + TY  +
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML-DNGIKPTIVTYNVL 580

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G+C   ++   + LLE M E+ + PN  TY SL+  +C   N +   ++   M     
Sbjct: 581 MNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNV 640

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   YN +I G CK   ++EA     +  ++  +    +Y+ L+    K+ +  +A  
Sbjct: 641 EPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARK 700

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           LF  M K G   +   Y   I     +  ++ +     E + A +  +K
Sbjct: 701 LFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVKSK 749



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 6/256 (2%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+ +YN ++  LC  GRV++A +L  +        D +TY IL+  +    E + A+ L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV  G+ P+   YT+++A  C + ++ ++    ++ +   +   +  YT+++ G+   
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++ SA ++F  M + G A D +TY  LI+GLC+  +L EA +  + M+ + +   EVT 
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 581 VTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L   YCK+G  A A  +  ++ ++     + T   L   LC +  V  A    H++  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 638 KDQNVDRVSLAALKNA 653
           K   ++  +  +L N 
Sbjct: 498 KGLELNACTYNSLING 513



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 4/248 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +SN   E        +++   + G L +    + +M   GL     T   ++   C+ G 
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++  EM   G+     +Y +++  +C  GRV    + L  ML++    +  T   
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  +C      ++K   E+ + M  +  +PN  T+ +LI G CK    ++A + F   +
Sbjct: 615 LMKQYC---IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA-QYFHNEM 670

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
               ++    +Y+A+I    K++K   A  L   M+++G     + Y   I  +    N 
Sbjct: 671 IEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNL 730

Query: 384 ERAYDLMD 391
           E    L D
Sbjct: 731 EATLALCD 738



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 8/197 (4%)

Query: 470 PD--IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           PD  + +Y  L+   C   +++++ + F E  +    P   TY  +I GY   G + +AV
Sbjct: 258 PDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAV 314

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           K    M   G  P+   Y ++++ LC + ++ +A    E M+   +   E    T+   +
Sbjct: 315 KLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 588 CKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           C +GD  +A    + + +K       T  TLI  LC    +  A     ++L +  +VD 
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 645 VSLAALKNACYESNKYA 661
           V+   L +   +  K A
Sbjct: 435 VTYTVLVDGYCKRGKMA 451



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 26/202 (12%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y     +L  +G  +RAH+++Q                    EM +NG+     T N ++
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQ--------------------EMLDNGIKPTIVTYNVLM 581

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C  G VE  +++ + M  + +  +A++Y  ++  YC    +         M  R   
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVE 641

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            +  T  +LI   C      S+K+A     EM+ KG++    +++ LI  L KK    +A
Sbjct: 642 PNENTYNILIKGHCKA---RSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEA 698

Query: 316 FRLFLKLVRSDNY--KPNVHTY 335
            +LF  + R + +  +P+V+ +
Sbjct: 699 RKLFHDM-RKEGFTAEPDVYNF 719


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 225/460 (48%), Gaps = 15/460 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   ++G      +M+ +M  + +       + +V   C+ G    A+ +F EM  +G
Sbjct: 51  IVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKG 110

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  YC  G+ ++A++ L  M++R    D  T + LI AF  +G    + 
Sbjct: 111 IFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEG---KVS 167

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A EL  EM+R+   P   T++ +IDG CK    E A  +F  L+ S    P++ T   +
Sbjct: 168 GAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMF-DLMVSKGCSPDIITLNTL 226

Query: 339 ISGYCKEEK-----------MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           I G C+ ++           +N A+ L + M   G+ P+  T  +L+ G C+ G  E+A 
Sbjct: 227 IDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKAL 286

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           ++  +  K     +    N II+G+CK  +V EA++L        ++ D +TY IL+   
Sbjct: 287 EMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVF 346

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +K+    +A  ++  M+  G+ P    Y +++  FC+Q +++E+ +     ++ G  P  
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T++++I GY + G +   ++ F  M Q G   D ITY ALI G CK   L+ A   +E 
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           M+  G+ P  +T  ++    C + +    + +LE L K +
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKSV 506



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 222/487 (45%), Gaps = 20/487 (4%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   G P    T   ++   C  G V  A  + D M   G   DA +Y  +V   C++G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 239 VTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
              A   L  M D   I  N  + + ++   C  G    IK A  +  EM  KG  PNV 
Sbjct: 61  TVSALNMLRKM-DESQIKANVVIYSAIVDRLCKDG--NHIK-AQNIFTEMHEKGIFPNVL 116

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  +IDG C  G    A +L   ++   N  P+V T++A+I+ + KE K++ AE L   
Sbjct: 117 TYNCMIDGYCSYGKWSDAEQLLRDMIER-NIDPDVVTFSALINAFVKEGKVSGAEELYRE 175

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK-- 415
           M  + + P T TY+S+I G CK    E A  + DLM  +GC+P+I   N +IDG C+   
Sbjct: 176 MLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKR 235

Query: 416 ---------GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
                    G V  A +L ++     +  D +T   LL+   +  + ++AL +F    K+
Sbjct: 236 HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKS 295

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++ D      +I   C+  K+ E+   F      G+     TY  +I  ++++GN   A
Sbjct: 296 KMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              +  M   G  P  +TY +++ G CKQ++L+EA Q  +SM+ +G SP  VT  TL   
Sbjct: 356 EDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           YCK G     + +   + ++  +    T N LI   C    +  A   F +++      D
Sbjct: 416 YCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475

Query: 644 RVSLAAL 650
            ++  ++
Sbjct: 476 TITFRSM 482



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 9/368 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  +   G+  +   ++ +M    +     T + ++    + G V  AEE++ EM  
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD------ 270
           R +     +Y  M+  +C+  R+ +A      M+ +G   D  TL  LI   C       
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238

Query: 271 KGF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            GF   G++  A +L +EM+  G  P++ T   L+ GLC+ G  EKA  +F K+ +    
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF-KVFQKSKM 297

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +  T   +I+G CK  K++ A  L   +   G+  +  TY  LI    K GNF RA D
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   M  +G  P+   YN+++DG CK+ R++EA +++          D +T++ L+  + 
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K       L LF  M + GL  D   Y  LI  FC+   +  ++  F+E +++G+ P   
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 509 TYTSMICG 516
           T+ SM+ G
Sbjct: 478 TFRSMLAG 485



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 160/327 (48%), Gaps = 18/327 (5%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E G   N  T+T+L+ G C+ G   +A  L+D M +EG  P+   Y  I++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
              A  +L+K  + +++A+ + Y+ ++    K     +A  +F  M + G+ P++  Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I  +C   K  ++E+  ++ I   + P   T++++I  ++++G +S A + ++ M +  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT-----------LAYE 586
             P  ITY ++I G CK S+L++A   ++ M+ KG SP  +T  T           L + 
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 587 YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +C+ G+   A  + + +        I T NTL+  LC   ++  A   F        ++D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 644 RVSLAALKNACYESNK----YALFSDL 666
             +   + N   + NK    + LF+ L
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSL 327



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 3/171 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G       + +EM   G+   T T N +V   C+   +E A ++ D M + G
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++  YC+ GRV +     S M  RG + D  T   LI  FC  G    + 
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVG---DLN 458

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            A ++ EEMV  G  P+  T   ++ GLC K   +K   +   L +S +++
Sbjct: 459 GAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKSVDHE 509


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 23/427 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G  +D    T L+ 
Sbjct: 84  ADEVTPNLC---------TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC +  +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY+S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRK 618
           +++E MI + +SP  +   +L +  C   + D A  + ILE LD+ + + T+  N++I  
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL-ILEMLDRGICLDTIFFNSIIDS 488

Query: 619 LCSEKRV 625
            C E RV
Sbjct: 489 HCKEGRV 495



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +    EM + G+     T + ++   C+   ++ A EV   M   G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +V  YC  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG---RCT 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL P+T TY ++I   CK G  E A    + M  E  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I  LC   +  +A EL+ +   R +  D I +  ++  H K+    ++  
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y+TLI  +C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 234/515 (45%), Gaps = 80/515 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           ++G  C  G ++        +  +G   DA ++  ++   C   R ++A D  L  M   
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKG 310
           G I +  +  +L+   CD+      ++A ELL+ M   G    P+V ++T +I+G  K+G
Sbjct: 157 GCIPNVFSYNILLKGLCDENRS---QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+  + +++      PNV TY+++I+  CK + M++A  +L  M + G++PN  TY
Sbjct: 214 DLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++     +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 431 RELQADKITY-----------------------------------TILLSEHLKQAETKQ 455
           R L+ +  TY                                   +IL+  + KQ +  Q
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI- 514
           A+ +F +M + GLNPD   Y T+I   C+  +++++ ++F++ I   L P    Y S+I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 515 -----------------------C-----------GYLRDGNISSAVKYFQRMNQIGCAP 540
                                  C            + ++G +  + K F  M +IG  P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   YCK      A+++ 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             +ES      I T N +++ L   +R   A   +
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 8/495 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNCR-TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +G    + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQG---KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  +   P    Y ++I   C  +K ++A+ L+  M ++G+  +T  + S+I  HCK 
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    +  L DLM + G  P+I  Y+ +IDG C  G++ EA +LL       ++ D +TY
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++ +     
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L K  + DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           A   + ++   G+ P   T   +A    +QG       +  S+++       R +N+++R
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 618 KLCSEKRVGMAALFF 632
           KL     +  A  + 
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 15/277 (5%)

Query: 374 IYG-HCKVGNFER--------AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           IYG +C + +  R         Y+ M   G +  TPN+  Y  +I   C  GR+   +  
Sbjct: 54  IYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA 113

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFC 483
           L    ++  + D I +T LL        T  A+ +   RM + G  P++ +Y  L+   C
Sbjct: 114 LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173

Query: 484 RQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            + + +E+ +  Q     G    P   +YT++I G+ ++G++  A   +  M   G  P+
Sbjct: 174 DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY ++I+ LCK   +D+A +   SM+  G+ P   T  ++ + YC  G    A+  L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +     +  + T N+L+  LC   R   A   F  +
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 211/417 (50%), Gaps = 11/417 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFR 274
           A  V  D  +Y +++   CR GR+      L  ++ +G  +D    T L+   C DK   
Sbjct: 80  ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK--- 136

Query: 275 GSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPN 331
                A ++ L  M   G  PNV+++ +L+ GLC +  +++A  L   +   R     P+
Sbjct: 137 -RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V +YT +I+G+ KE   ++A      M ++G+LP+  TY S+I   CK    ++A ++++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K G  P+   YN+I+ G C  G+ +EA   LKK     ++ D +TY++L+    K  
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G+ P    ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +IC Y   G +  A+  F +M Q G  P+ +TYGA+I  LCK  ++++A  ++E MI +
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 572 GISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
           G+SP  +   +L +  C       A  +ILE LD+ + + T+  N++I   C E RV
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 228/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM + G+     T N ++   C+   ++ A EV + M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  YC  G+  EA  +L  M   G   D  T +LL+   C  G      
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG---RCM 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   P+ + ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSIL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y  + K+++A ++  +M++QGL PN  TY ++I   CK G  E A    + M  EG 
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I GLC   + + A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ P++  Y TLI  +C   KM E+ K     ++ GL P   TY+++I GY 
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   + +  CK   +  A+ + ++L   D KL  RT N +I  L    R   A   F
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 205/421 (48%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDRG + D  T   +I A C      ++
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ---AM 247

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  P+  T+  ++ G C  G  ++A   FLK +RSD  +P+V TY+ 
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG-FLKKMRSDGVEPDVVTYSL 306

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK  +   A  + + M ++GL P   TY +L+ G+   G     + L+DLM + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ Y ++ +I     +G+V +A  +  K  Q+ L  + +TY  ++    K    + A+
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+  GL+P    Y +LI   C   K + +E+   E +  G+      + S+I  +
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G +  + K F+ M +IG  P+ ITY  LI+G C   K+DEA +    M+  G+ P  
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 578 VTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT  TL   YCK      A+++   +ES      I T N +++ L   +R   A   + +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 635 L 635
           +
Sbjct: 607 I 607



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 220/472 (46%), Gaps = 26/472 (5%)

Query: 149 FERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
            ++A EV+  MV +               +   G+ KE    + +M ++G+     T + 
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D+   ++LI A+ ++G    + QA  +  +M ++G  PN  T+  +I  LCK G  E
Sbjct: 367 IHPDHYVFSILICAYANQG---KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A   F +++  +   P    Y ++I G C   K  RAE L+  M ++G+  NT  + S+
Sbjct: 424 DAMLYFEQMI-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  HCK G    +  L +LM + G  PN+  YN +I+G C  G++ EA +LL       L
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + +TY+ L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            +     +G      TY  ++ G  ++     A++ FQ +  +    +  T+  +I  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           K  + DEA   + +    G+ P   T   +A     QG       +LE LD+
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG-------LLEELDQ 707



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 180/393 (45%), Gaps = 5/393 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H V   ++ ++A  G++ +   +  +M   GL     T   V+GI C+ G
Sbjct: 362 MVRNG-IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            VE A   F++M   G+      Y  ++   C   +   A+  +  MLDRG  L+     
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I + C +   G + ++ +L E MVR G KPNV T+  LI+G C  G  ++A +L   +
Sbjct: 481 SIIDSHCKE---GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KPN  TY+ +I+GYCK  +M  A +L + M+  G+ P+  TY  ++ G  +   
Sbjct: 538 V-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L   + + G    +  YN I+ GLCK     +A ++ +     +L+ +  T+ I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK     +A  LF      GL P+   Y  +      Q  ++E ++ F      G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
                     ++   L+ G I+ A  Y   +++
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 183/398 (45%), Gaps = 13/398 (3%)

Query: 274 RGSIKQAFELLEEMVRKGWK---PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           R S   A      M R G     P++ T+ +LI   C+ G  +  F     +++   ++ 
Sbjct: 62  RDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKK-GFRV 120

Query: 331 NVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           +   +T ++ G C +++ + A +++L RM E G +PN  +Y  L+ G C     + A +L
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180

Query: 390 MDLMGKE---GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + +M  +   G  P++ +Y  +I+G  K+G   +AY    +   R +  D +TY  +++ 
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K     +A+ +   MVK G+ PD   Y +++  +C   + KE+  F ++  + G+ P 
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 507 KETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
             TY S++  YL ++G    A K F  M + G  P+  TYG L+ G   +  L E     
Sbjct: 301 VVTY-SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
           + M+  GI P       L   Y  QG    AM++   + ++       T   +I  LC  
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            RV  A L+F +++ +  +   +   +L +     NK+
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 39/306 (12%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM + G+ L T   N ++   C+ G V  +E++F+ M   GV  +  +Y  ++  YC
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             G++ EA + LS M+  G   +  T + LI  +C       ++ A  L +EM   G  P
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS---RMEDALVLFKEMESSGVSP 579

Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
           ++ T+ +++ GL                                   CK   T+ A ++F
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             L   D  K    T+  MI    K  + + A+ L       GL+PN  TY  +      
Sbjct: 640 QNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E    L   M   GCT +    N I+  L ++G +  A   L    ++    +  T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758

Query: 440 YTILLS 445
            ++ + 
Sbjct: 759 ASLFID 764


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 23/427 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G  +D    T L+ 
Sbjct: 84  ADEVTPNLC---------TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC +  +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY+S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRK 618
           +++E MI + +SP  +   +L +  C   + D A  + ILE LD+ + + T+  N++I  
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL-ILEMLDRGICLDTIFFNSIIDS 488

Query: 619 LCSEKRV 625
            C E RV
Sbjct: 489 HCKEGRV 495



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +    EM + G+     T + ++   C+   ++ A EV   M   G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +V  YC  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG---RCT 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL P+T TY ++I   CK G  E A    + M  E  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I  LC   +  +A EL+ +   R +  D I +  ++  H K+    ++  
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y+TLI  +C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 233/511 (45%), Gaps = 80/511 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           ++G  C  G ++        +  +G   DA ++  ++   C   R ++A D  L  M   
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKG 310
           G I +  +  +L+   CD+      ++A ELL+ M   G    P+V ++T +I+G  K+G
Sbjct: 157 GCIPNVFSYNILLKGLCDENRS---QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+  + +++      PNV TY+++I+  CK + M++A  +L  M + G++PN  TY
Sbjct: 214 DLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++     +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 431 RELQADKITY-----------------------------------TILLSEHLKQAETKQ 455
           R L+ +  TY                                   +IL+  + KQ +  Q
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI- 514
           A+ +F +M + GLNPD   Y T+I   C+  +++++ ++F++ I   L P    Y S+I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 515 -----------------------C-----------GYLRDGNISSAVKYFQRMNQIGCAP 540
                                  C            + ++G +  + K F  M +IG  P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   YCK      A+++ 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
             +ES      I T N +++ L   +R   A
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAA 603



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 8/495 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNCR-TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +G    + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQG---KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  +   P    Y ++I   C  +K ++A+ L+  M ++G+  +T  + S+I  HCK 
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    +  L DLM + G  P+I  Y+ +IDG C  G++ EA +LL       ++ D +TY
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++ +     
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L K  + DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           A   + ++   G+ P   T   +A    +QG       +  S+++       R +N+++R
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 618 KLCSEKRVGMAALFF 632
           KL     +  A  + 
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 15/277 (5%)

Query: 374 IYG-HCKVGNFER--------AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           IYG +C + +  R         Y+ M   G +  TPN+  Y  +I   C  GR+   +  
Sbjct: 54  IYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA 113

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFC 483
           L    ++  + D I +T LL        T  A+ +   RM + G  P++ +Y  L+   C
Sbjct: 114 LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173

Query: 484 RQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            + + +E+ +  Q     G    P   +YT++I G+ ++G++  A   +  M   G  P+
Sbjct: 174 DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY ++I+ LCK   +D+A +   SM+  G+ P   T  ++ + YC  G    A+  L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +     +  + T N+L+  LC   R   A   F  +
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 209/436 (47%), Gaps = 4/436 (0%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++K  ++ +  +   G P      N V+   C  G V  A EVFD M   G   D  SY 
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V   C+ G V      L  M   G   +  + + L+   C  G    ++ AFEL + +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG---RVELAFELFKRL 379

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G+K +   +++++ G C+    E  + L+  +V   N+ P+ + Y+++I  YC+  +
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH-NFVPDAYNYSSLIYAYCRHRQ 438

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  + E M   G+ PN  T T L++G    G    A+  +D + + G  P++  Y  
Sbjct: 439 LKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRV 498

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           II GLCK  +  + + +     +R    D + Y+I++   +K  + ++A  L+ +MV  G
Sbjct: 499 IIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  YT+LI   C   K+ E    F+  I  GL P +  YTS+I  Y +  N+ +A+
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAAL 618

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F+ M   G + D+  Y  LI G  K   +D A  F E M+ KG++P  VT   L   Y
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGY 678

Query: 588 CKQGDSATAMIILESL 603
            K GD   AM +  S+
Sbjct: 679 FKIGDEKKAMAMYNSM 694



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 192/384 (50%), Gaps = 6/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V    + G +  G+ M++EM  NG+ P + S  + + G+ C  G VE A E+F  +  +
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGL-CRAGRVELAFELFKRLKDQ 382

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y +++   C+   +       + M+    + D    + LI A+C       +
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCR---HRQL 439

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K+A E+ E MV  G  PNV T T+L+ G   +G   +AF LFL  VR     P++ TY  
Sbjct: 440 KEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAF-LFLDKVRQFGVVPSLCTYRV 498

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K N    +   M ++G +P+T  Y+ +I G  K  + + A+ L   M  EG
Sbjct: 499 IIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PNI+ Y ++I+GLC   ++ E   L K      L  D+I YT L++ + K++  K AL
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAAL 618

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M   GL+ D   YT LI  F +   M  ++ F +E +  GL PT  TYT +I GY
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGY 678

Query: 518 LRDGNISSAVKYFQRMNQIGCAPD 541
            + G+   A+  +  M Q G APD
Sbjct: 679 FKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 203/390 (52%), Gaps = 7/390 (1%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           +G +PN  T+   + GLC     + A+  FL+++    Y  N + + A+I G+C + +++
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWN-FLQMLCQRGYPCNNYCFNAVIHGFCHDGQVH 300

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A  + + MK+ G +P+ ++Y+ L+ G CK G+    Y ++  M + G TPN+ +Y++++
Sbjct: 301 KAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLL 360

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC+ GRV+ A+EL K+   +  + D I Y+I+L    +  + +    L+  MV     
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFV 420

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD + Y++LI A+CR +++KE+ + F+  ++ G+ P   T T ++ G+  +G I  A  +
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLF 480

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
             ++ Q G  P   TY  +I GLCK +K ++    +  MI +G  P  V    +   + K
Sbjct: 481 LDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVK 540

Query: 590 QGDSATAM-IILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
             D   A  +  + +D+  K  I T  +LI  LC + ++      F  ++G+    DR+ 
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRIL 600

Query: 647 LAALKNACY--ESNKYALFSDLSQRIAEGI 674
             +L  ACY   SN  A      +   EG+
Sbjct: 601 YTSLI-ACYCKRSNMKAALEIFREMETEGL 629



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 199/391 (50%), Gaps = 4/391 (1%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  +A++Y   +   C   +V  A  +L  +  RG   +N     +I  FC  G   
Sbjct: 241 VEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDG--- 297

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A E+ + M + G+ P+V+++++L+DGLCK+G     + + +++ R +   PN+ +Y
Sbjct: 298 QVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMAR-NGITPNLVSY 356

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           ++++ G C+  ++  A  L +R+K+QG   +   Y+ +++G C+  + E  YDL + M  
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               P+ Y Y+++I   C+  +++EA E+ +      +  + +T TIL+     +    +
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A     ++ + G+ P +  Y  +I   C+  K  +    F + I  G  P    Y+ +I 
Sbjct: 477 AFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIID 536

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+++  ++  A + + +M   G  P+  TY +LI+GLC   KL E    ++ MIG+G++P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAP 596

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             +   +L   YCK+ +   A+ I   ++ +
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETE 627



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 149/362 (41%), Gaps = 44/362 (12%)

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE--QGLLPNTNTYTSLI 374
           R     ++S    PNV++Y+ ++S Y    K+   E L    +   +G+ PN  TY + +
Sbjct: 196 RSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYL 255

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           YG C     + A++ + ++ + G   N Y +NA+I G C  G+V +A E+          
Sbjct: 256 YGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEV---------- 305

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                                    F  M K G  PD+H+Y+ L+   C+Q  +      
Sbjct: 306 -------------------------FDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYM 340

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             E    G+ P   +Y+S++ G  R G +  A + F+R+   G   D+I Y  ++ G C+
Sbjct: 341 LVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQ 400

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
              L+     +  M+     P      +L Y YC+      A+ + E +        + T
Sbjct: 401 HLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVT 460

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL----LGKDQNVDRVSLAALKNACYESNKYALFSDLS 667
              L+    +E  +G A LF  K+    +       RV +  L      ++ + +F+D+ 
Sbjct: 461 CTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMI 520

Query: 668 QR 669
           +R
Sbjct: 521 KR 522


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 187/330 (56%), Gaps = 4/330 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI  FC +G   SI+ A  +  E+ ++G +P   +   LI+GLCK    ++ FRL  K
Sbjct: 227 NILINKFCKEG---SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL-KK 282

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +  +   P+V TY+ +I G CKE +++ AE L + M+++GL PN  T+T+LI G  +  
Sbjct: 283 TMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSR 342

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A +    M   G  P++  YN +++GLCK G V +A +L+ +     ++ DKITYT
Sbjct: 343 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  + K+ + + A+ +   M + G+  D  A+T LI+ FCR  +++++E+  +E + A
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TYT +I GY + GN+    K  + M   G  P  ITY  L++GLCKQ ++  A
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNA 522

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
               E+M+  G++P ++T   L   +CK G
Sbjct: 523 NMLLEAMLNLGVTPDDITYNILLEGHCKNG 552



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 203/424 (47%), Gaps = 17/424 (4%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G+ + A  + + +   G    N     L+ A+ D GF     Q F L+       ++ 
Sbjct: 130 RKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN---SNFQI 186

Query: 295 NVYTHTVLIDGLCKKG-----WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
             +    L+D +         WT      F   +    + P V  Y  +I+ +CKE  + 
Sbjct: 187 PFHGCGYLLDKMINSNSPVTIWT------FYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A+++   ++++GL P T ++ +LI G CK  N +  + L   M +    P+++ Y+ +I
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLCK+GR+  A +L  +  QR L+ + IT+T L+    +      A+  + +M+  G+ 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y TL+   C+   + ++ K   E    G+ P K TYT++I GY ++G++ SA++ 
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            + MN+ G   DN+ + ALISG C+  ++ +A +    M+  G+ P + T   +   YCK
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 590 QGDSATAMIILESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +G+      +L+ +     K  + T N L+  LC + ++  A +    +L      D ++
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 647 LAAL 650
              L
Sbjct: 541 YNIL 544



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 223/470 (47%), Gaps = 28/470 (5%)

Query: 98  EQAITVVASLANEAGS------MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER 151
           + A +V A++ + AG+        AL   YW  GF          I C   L+ N NF+ 
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDA------IQCF-RLVRNSNFQI 186

Query: 152 AHE----VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                  ++  M++S + +  +   +S ++E    G P      N ++   C+ G +  A
Sbjct: 187 PFHGCGYLLDKMINSNSPV-TIWTFYSEILEY---GFPPKVQYYNILINKFCKEGSIRDA 242

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           + +F+E+  RG+     S+  ++   C+   + E  R    M +     D  T ++LI  
Sbjct: 243 KLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHG 302

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C +G    +  A +L +EM ++G +PN  T T LIDG  +    + A   + +++ +  
Sbjct: 303 LCKEG---RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML-TMG 358

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            KP++  Y  +++G CK   +N+A  L++ MK  G+ P+  TYT+LI G+CK G+ E A 
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM 418

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           ++   M +EG   +  A+ A+I G C+ GRV++A   L++  +  ++ D  TYT+++  +
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+   K    L   M   G  P +  Y  L+   C+Q +MK +    +  +  G+ P  
Sbjct: 479 CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            TY  ++ G+ ++G     +K     N+ G   D   Y +L+S   K  K
Sbjct: 539 ITYNILLEGHCKNGKAEDLLKL---RNEKGLIVDYAYYTSLVSEYNKSLK 585



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 172/350 (49%), Gaps = 4/350 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           + E+   G       Y +++  +C+ G + +A    + +  RG      +   LI   C 
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                ++ + F L + M      P+V+T++VLI GLCK+G  + A +LF ++ +    +P
Sbjct: 271 SR---NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM-QQRGLRP 326

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  T+TA+I G  +  +M+ A     +M   G+ P+   Y +L+ G CKVG+  +A  L+
Sbjct: 327 NGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV 386

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M   G  P+   Y  +IDG CK+G ++ A E+ K   +  +  D + +T L+S   + 
Sbjct: 387 DEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
              + A      MV+AG+ PD   YT +I  +C++  +K   K  +E    G  P   TY
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
             ++ G  + G + +A    + M  +G  PD+ITY  L+ G CK  K ++
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 36/329 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   +   L EGF +   M  N +     T + ++   C+ G ++ AE++FDEM  RG
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++    R  R+  A      ML  G   D      L+   C  G    + 
Sbjct: 324 LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVG---DVN 380

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L++EM   G KP+  T+T LIDG CK+G  E A  +   +        NV  +TA+
Sbjct: 381 KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTAL 439

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+C++ ++  AE  L  M E G+ P+  TYT +I G+CK GN +  + L+  M   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL-------------- 444
            P +  YN +++GLCK+G+++ A  LL+      +  D ITY ILL              
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559

Query: 445 ------------------SEHLKQAETKQ 455
                             SE+ K  + +Q
Sbjct: 560 LRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 32/166 (19%)

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           F+ E +  G  P  + Y  +I  + ++G+I  A   F  + + G  P  +++  LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           K   LDE  +  ++M    I P                                 + T +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPD--------------------------------VFTYS 297

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            LI  LC E R+ +A   F ++  +    + ++  AL +  Y S +
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 229/472 (48%), Gaps = 30/472 (6%)

Query: 127 AKFRHFMRLYIVCATSLISNGNFE-------------RAHEVMQC--MVSSFAEIGRLKE 171
           ++ RH  RL        I NG  E             ++ +V+ C  ++  F +IGR K 
Sbjct: 81  SEIRHLRRL--------IRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKN 132

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
              ++  +  +G  +  ++ N ++   C+ G +E A  V D M   GV  +A++Y  ++ 
Sbjct: 133 ASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLC 189

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
           + C  G++ +A + L   L      D  T T+LI A C +     + QA +L  EM  KG
Sbjct: 190 SLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKES---GVGQAMKLFNEMRNKG 246

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            KP+V T+ VLI G CK G  ++A R FLK + S   +P+V ++  ++   C   +   A
Sbjct: 247 CKPDVVTYNVLIKGFCKGGRLDEAIR-FLKKLPSYGCQPDVISHNMILRSLCSGGRWMDA 305

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             LL  M  +G LP+  T+  LI   C+ G   +A +++++M K G TPN  ++N +I G
Sbjct: 306 MKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 365

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            C    +  A E L+    R    D +TY ILL+   K  +   A+ +  ++   G +P 
Sbjct: 366 FCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 425

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           + +Y T+I    +  K + + +  +E    GL P   T TS++ G  R+G +  A+K+F 
Sbjct: 426 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFH 485

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            + +    P+   Y ++I+GLCK  +   A  F   M+ KG  P E T  TL
Sbjct: 486 YLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTL 537



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 215/441 (48%), Gaps = 12/441 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E      + M  +G   D  +   ++  +C++GR   A + +  + + GA++D  + 
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI+ +C  G    I++A  +L+ M   G  PN  T+  ++  LC +G  ++A ++  +
Sbjct: 153 NVLISGYCKSG---EIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGR 206

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++S  Y P+V T T +I   CKE  + +A  L   M+ +G  P+  TY  LI G CK G
Sbjct: 207 QLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   +  +   GC P++ ++N I+  LC  GR  +A +LL    ++      +T+ 
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +AL +   M K G  P+  ++  LI  FC  K +  + ++ +  ++ 
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY  ++    +DG +  AV    +++  GC+P  I+Y  +I GL K  K + A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIR 617
            +  E M  KG+ P  +T  ++     ++G    AM     L K+  IR      N++I 
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL-KRFAIRPNAFIYNSIIT 504

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
            LC  ++  +A  F   ++ K
Sbjct: 505 GLCKSQQTSLAIDFLADMVAK 525



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 186/404 (46%), Gaps = 10/404 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + E  R+L  M ++G   D    T LI  FC  G   +  Q   +LEE    G   
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEE---SGAVI 147

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V ++ VLI G CK G  E+A R+  ++       PN  TY A++   C   K+ +A  +
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQV 203

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L R  +    P+  T T LI   CK     +A  L + M  +GC P++  YN +I G CK
Sbjct: 204 LGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            GR+ EA   LKK      Q D I++ ++L           A+ L   M++ G  P +  
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   C++  + ++    +     G  P   ++  +I G+     I  A++Y + M 
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K+D+A      +  KG SP  ++  T+     K G + 
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443

Query: 595 TAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            A+ +LE +     K  + T  +++  L  E +V  A  FFH L
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL 487



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 15/233 (6%)

Query: 415 KGRVQEAYELLKKAFQR-ELQADKITYTILLSE----HLKQ----AETKQALGLFCRMVK 465
           KG +Q +    K A    E   D++  ++   E    HL++     E ++       M  
Sbjct: 48  KGNLQHSERFSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTN 107

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G +PD+ A T LI  FC+  + K + +       +G      +Y  +I GY + G I  
Sbjct: 108 KGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEE 167

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++   RM   G +P+  TY A++  LC + KL +A Q     +     P  VT   L  
Sbjct: 168 ALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLID 224

Query: 586 EYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             CK+     AM +   +  K     + T N LI+  C   R+  A  F  KL
Sbjct: 225 ATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL 277



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 99/273 (36%), Gaps = 68/273 (24%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++ S    GR  +   ++  M   G LP +  T N ++   C+ GL+  A  V + M   
Sbjct: 292 ILRSLCSGGRWMDAMKLLATMLRKGCLPSVV-TFNILINFLCQKGLLGKALNVLEMMPKH 350

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--- 274
           G   ++ S+  ++  +C    +  A  +L  M+ RG   D  T  +L+TA C  G     
Sbjct: 351 GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 410

Query: 275 -----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                        G  + A ELLEEM  KG KP++ T T ++ G
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470

Query: 306 LCKKGWTEKAFRLFLKLVR----------------------------------SDNYKPN 331
           L ++G   +A + F  L R                                  +   KP 
Sbjct: 471 LSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPT 530

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             TYT +I G   E     A  L   +  +GL+
Sbjct: 531 EATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +    ++ + M   G +PD I   ALI   CK  +   A Q    +   G     
Sbjct: 90  IRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDV 149

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            +   L   YCK G+   A+ +L+ +       T + ++  LC   ++  A     + L 
Sbjct: 150 TSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 638 KDQNVDRVSLAALKNA-CYES 657
                D V+   L +A C ES
Sbjct: 210 SKCYPDVVTCTVLIDATCKES 230


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 210/454 (46%), Gaps = 39/454 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   ++   C  G +  A++    +   G+  D+ +Y   V+ YCR G +T A R    M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM---------------------- 287
             RG +    T T L+      G    +++A  +   M                      
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGM---VREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 288 -------------VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
                        +  G++PN+  +  LIDG C  G  E A ++F + +  +   PNV T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRT 249

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G CK  K+ RA +L  RM E GL PN  TYT+LI G C  G+ + A+ L+ LM 
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  PN + ++ +ID LCK+ +V+EA   L    ++ ++ +++ YT L+    K  +  
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L  +M+  G  PD H+Y++LI   CRQKK+ ++    ++ +  G+  +  TYT +I
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              +R+       K F +M   G  PD +TY   +   C++ ++++A      M+ +G+ 
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           P  VT  TL   Y   G  + A    E +  K W
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 210/400 (52%), Gaps = 4/400 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E  ++ + M  +     T     +V   CE G  E AE + +E  + G   +   Y
Sbjct: 156 GMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC  G +  A +    M       +  T T LI   C  G    +++A  L   
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG---KVERAMVLFSR 272

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV  G +PNV T+T LI G C +G  + AFRL L L+ ++   PN  T++ +I   CK E
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL-LHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  A++ L  + ++G+  N   YTSLI G CK G  + A +LM  M  EG  P+ ++Y+
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLC++ ++ +A  +L+   ++ +QA  +TYTI++ E +++  ++    +F +M+  
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT 451

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+NPDI  YT  + ++C + +M+++E    + +  G+FP   TY ++I GY   G +S A
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              F+ M   G  P+  +Y  L+  + K+S  D +   ++
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 4/361 (1%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           F  +E +  +    N+ T+T LI+  C  G    A +    L+ +    P+ + YT+ + 
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHA-GLAPDSYAYTSFVL 115

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYC+   +  A  +   M  +G L    TYT+L++G    G    A  +   M  + C P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAP 175

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           + + Y  ++ GLC+ GR +EA  LL++A     + + + Y  L+  +    E + AL +F
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M     +P++  YT LI   C+  K++ +   F   + AGL P   TYT++I G   +
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++  A +    M   G  P++ T+  LI  LCK+ K++EA  F  S++ KG+   EV  
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            +L    CK G    A  +++ +  + ++    + ++LI  LC +K++  A L    ++ 
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415

Query: 638 K 638
           K
Sbjct: 416 K 416



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 42/397 (10%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI---------------GRLKEGFSMVI 177
           +R Y      L  +G  ERA  +   MV +  E                G L+  F ++ 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  NGL     T + ++   C+   VE A+     +  +GV  +   Y  ++   C+ G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++  AD  +  M+  G + D  + + LI   C +     + QA  +LE+M+ KG + +  
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK---KLSQATLMLEDMMEKGIQASPV 423

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T++ID L ++  +E   ++F K++ +    P++ TYT  +  YC+E +M  AE ++ +
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M ++G+ PN  TY +LI G+  +G   +A+   ++M  +G  PN  +Y  ++  + KK  
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSS 542

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
              + ++ K A  ++LQ        +L E + + +   A  +               Y+ 
Sbjct: 543 SDNSVDIWKIADMKDLQ--------VLLEDITERQLPLAADI---------------YSC 579

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            I   CR  +++E++ FF     A L P+++ YTS+I
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 48/293 (16%)

Query: 138 VCATSLIS----NGNFERAHEVMQCMVS--------SFAEI-------GRLKEGFSMVIE 178
           V  TSLI      G  + A E+MQ M+S        S++ +        +L +   M+ +
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412

Query: 179 MTNNGLPLITSTLNRVVG-IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           M   G+     T   ++  +  E+G  E  +++FD+M A G+  D  +Y + V +YC  G
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVG-SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ +A+  +  M+DRG   +  T   LI  + + G    + QAF   E MV KGWKPN  
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL---VSQAFSTFEVMVGKGWKPNED 528

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           ++TVL+             RL +K   SDN   +V  +        K   M   ++LLE 
Sbjct: 529 SYTVLL-------------RLVVKKSSSDN---SVDIW--------KIADMKDLQVLLED 564

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           + E+ L    + Y+  I   C+V   E A      M     TP+   Y +IID
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 8/268 (2%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P +   N ++  L +     +   L  +   R L+    TYT L++ +    +   A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              ++ AGL PD +AYT+ +  +CR   +  + + F      G   T  TYT+++ G L 
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A+  F  M    CAPD   Y  ++ GLC+  + +EA    E  +  G  P  V 
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L   YC  G+   A+ + E +D       +RT   LI  LC   +V  A + F +++
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 637 GKDQNVDRVSLAAL-KNACYESNKYALF 663
                 + V+  AL +  C E +    F
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAF 302


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 207/413 (50%), Gaps = 7/413 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  RG+  +  +  +++  +C++G +  A    + +L  G + D  T T LI   C   
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC--- 166

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I+QAF   +++V  G+  +  ++  LI GLCK G T  A  L L+ V  +  +PNV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL-LQRVDGNLVQPNV 225

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK + +N A  L   M  +G+ P+  TY++LI G C +G    A DL + 
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  E   P++Y +N +++  CK G+++E   +     ++ ++ + +TY  L+  +    E
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +F  M + G+NPDI +Y+ +I  FC+ KK  E+   F+E     + P   TY+S
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G IS A++   +M+  G  P   TY +++  LCK  ++D+A      +  KG
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
           I P   T   L    C+ G    A  + E L  K   L + T   +I+  C E
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVE 518



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 197/380 (51%), Gaps = 4/380 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G    A ++   +    V  +   Y  ++ + C++  V EA    S M+ +G   D 
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDV 260

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI+ FC     G +  A +L  +M+ +  KP+VYT  +L++  CK G  ++   +
Sbjct: 261 VTYSALISGFC---ILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  ++     KPN  TY +++ GYC  +++N+A+ +   M + G+ P+  +Y+ +I G C
Sbjct: 318 F-DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+  F+ A +L   M ++   P++  Y+++IDGL K GR+  A +L+ +   R +     
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +L    K  +  +A+ L  ++   G+ P+++ Y+ LI   C+  K++++ K F+  
Sbjct: 437 TYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGL 496

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G     +TYT MI G+  +G  + A+    +M   GC PD  TY  +I  L K+ + 
Sbjct: 497 LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 559 DEACQFYESMIGKGISPCEV 578
           D A +    MI +G+ P ++
Sbjct: 557 DMAEKLLREMIARGVRPRQI 576



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 186/363 (51%), Gaps = 6/363 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  +G KPN+    +LI+  C+ G    AF +F K+++   Y P+  T+T +I G 
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM-GYVPDTITFTTLIKGL 165

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C + ++ +A +  +++   G   +  +Y +LI+G CKVG    A DL+  +      PN+
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN IID +CK   V EA++L  +   + +  D +TY+ L+S      +   A+ LF +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+   + PD++ +  L+ AFC+  KMKE +  F   +  G+ P   TY S++ GY     
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ A   F  M Q G  PD  +Y  +I+G CK  K DEA   ++ M  K I P  VT  +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 583 LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L     K G  + A+ +++ +  +     IRT N+++  LC   +V  A     KL  KD
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL--KD 463

Query: 640 QNV 642
           + +
Sbjct: 464 KGI 466



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 222/468 (47%), Gaps = 7/468 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+LGL+ +A  VF ++   G   D  ++  ++   C  G++ +A  +   ++ 
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   D  +   LI   C     G  + A +LL+ +     +PNV  +  +ID +CK   
Sbjct: 184 LGFHFDQISYGTLIHGLCK---VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             +AF LF +++ S    P+V TY+A+ISG+C   K+N A  L  +M  + + P+  T+ 
Sbjct: 241 VNEAFDLFSEMI-SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            L+   CK G  +    + D+M K+G  PN   YN+++DG C    V +A  +     Q 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D  +Y+I+++   K  +  +A+ LF  M +  + PD+  Y++LI    +  ++  +
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   +    G+ PT  TY S++    +   +  A+    ++   G  P+  TY  LI G
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-- 609
           LC+  KL++A + +E ++ KG +    T   +   +C +G    A+ +L  ++    I  
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 610 -RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            +T   +I  L  +    MA     +++ +     ++++   K   Y+
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQKKKEYD 587



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 6/356 (1%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A  LF +L+R  N  P    +  ++    K +  +    L ++M+ +G+ PN     
Sbjct: 66  VDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C++G    A+ +   + K G  P+   +  +I GLC KG++Q+A+    K    
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D+I+Y  L+    K  ET+ AL L  R+    + P++  Y T+I + C+ K + E+
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E I+ G+ P   TY+++I G+   G ++ A+  F +M      PD  T+  L++ 
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
            CK  K+ E    ++ M+ +GI P  VT  +L   YC   +   A  I  ++ +      
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK--YAL 662
           I++ + +I   C  K+   A   F ++  K+   D V+ ++L +   +S +  YAL
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 84/165 (50%), Gaps = 3/165 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++ GR+     +V +M + G+P    T N ++   C++  V+ A  +  ++  +G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++   C+ G++ +A +    +L +G  L+  T T++I  FC +G      
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGL---FN 522

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +A  LL +M   G  P+  T+ ++I  L KK   + A +L  +++
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 3/165 (1%)

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +Y+S    +  + ++  AV  F R+ +    P    +  ++  L K           + M
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRV 625
             +GI P  V    L   +C+ G    A  +   + K  ++    T  TLI+ LC + ++
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
             A LF  K++    + D++S   L +   +  +     DL QR+
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 219/472 (46%), Gaps = 13/472 (2%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           ++++M   G+ +D  +  +++   C + R+ E     + +L RG   +  T   LI   C
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD--- 326
                  I +A  L   M + G  P+V T+  LI GLC  G    A +L  +++      
Sbjct: 151 ---MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRY 207

Query: 327 --NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
             N KPNV TY  ++ G CK  + + A+ L E MK QG++P+  +Y SLI+G C  G +E
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWE 267

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            +  L+D M  +G  P++  +N +ID LCK+G+V EA +LL    +  +  D +TY  L+
Sbjct: 268 ESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                  +   A  LF  M   G  PD+ +Y  LI  + +  K++E+ K + E +  G  
Sbjct: 328 EGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR 387

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY S++ G    G +  A K F  M   G A ++ TYG  + GLCK   L EA + 
Sbjct: 388 PNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKL 447

Query: 565 YESMIGKGISPCEVTRVT-LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
           +  +        E+  +  L    CK G   TA  + E L  +     + T   +I   C
Sbjct: 448 FTELKSSNFK-LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            E +V  A +   K+       D ++   L    YESNK      L  R+A+
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 558



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 220/503 (43%), Gaps = 47/503 (9%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI 177
           SF +   G AK +H+ +++ +     +S  + +R    +  +++    + RL+EGF+   
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRC--TLNILLNCLCNVNRLREGFAAFA 128

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            +   G      T N ++   C    +  A  +F  M   G   D  +Y  ++   C  G
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG 188

Query: 238 RVTEADRWLSAMLDR------GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +  A +    ML+           +  T  +++   C  G     KQ FE   EM  +G
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE---EMKTQG 245

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P++ ++  LI G C  G  E++ RL  +++     +P++ T+  +I   CKE K+  A
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEML-DQGLQPDMVTFNVLIDTLCKEGKVIEA 304

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + LL  M E G++P+  TY SLI G C VG+   A +L   M  +GC P++ +YN +I+G
Sbjct: 305 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 364

Query: 412 LCKKGRVQEAYELL-------------------------------KKAFQ----RELQAD 436
             K  +V+EA +L                                KK F       +  +
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY I L    K     +A+ LF  +  +    +I     LI   C+  K++ + + F+
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +    G  P   TYT MI G+ R+G +  A    Q+M   GC PD ITY  L+ G  + +
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544

Query: 557 KLDEACQFYESMIGKGISPCEVT 579
           KL+E  Q    M  K +SP  +T
Sbjct: 545 KLEEVVQLLHRMAQKDVSPDAIT 567



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 179/386 (46%), Gaps = 5/386 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C++G  + A+++F+EM  +G+     SY  ++  +C  G+  E+ R L  M
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           LD+G   D  T  +LI   C +G    + +A +LL  M+  G  P++ T+  LI+G C  
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEG---KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G    A  LF+ +  S   +P+V +Y  +I+GY K  K+  A  L   M   G  PN  T
Sbjct: 334 GDLNSARELFVSM-PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y SL+ G    G  + A  L  +M   G   N Y Y   +DGLCK   + EA +L  +  
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
               + +      L+    K  + + A  LF ++   G  P++  YT +I  FCR+ ++ 
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++    Q+    G  P   TY +++ G+     +   V+   RM Q   +PD IT   ++
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572

Query: 550 SGLCKQSKLDEACQFYESM-IGKGIS 574
             L K  K  E         I KG+ 
Sbjct: 573 DMLSKDEKYQECLHLLPRFPIQKGVD 598



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 165/372 (44%), Gaps = 70/372 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V    ++GR  E   +  EM   G+ P I S  + + G  C  G  E ++ + DEM  +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA-GKWEESKRLLDEMLDQ 279

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS- 276
           G+  D  ++ +++   C+ G+V EA + L  M++ G + D  T   LI  FC  G   S 
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339

Query: 277 -------------------------------IKQAFELLEEMVRKGWKPNV--------- 296
                                          +++A +L  EM+  G +PNV         
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399

Query: 297 --------------------------YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                                     YT+ + +DGLCK     +A +LF +L +S N+K 
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL-KSSNFKL 458

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
            +     +I G CK  K+  A  L E++  +G  PN  TYT +I+G C+ G  ++A  L+
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M   GCTP+I  YN ++ G  +  +++E  +LL +  Q+++  D IT +I++    K 
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 578

Query: 451 AETKQALGLFCR 462
            + ++ L L  R
Sbjct: 579 EKYQECLHLLPR 590



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 15/285 (5%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDL--MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           +P+ N   +    HCK GN    + L    LM +   TP++ ++N ++ GL K     + 
Sbjct: 29  IPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           + L  +     L +D+ T  ILL+        ++    F  +++ G +P+I  Y TLI  
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM------NQ 535
            C + ++ E+ + F      G  P   TY ++I G    GNI+ A+K  Q M       +
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SA 594
           I C P+ ITY  ++ GLCK  + DEA Q +E M  +G+ P  ++  +L + +C  G    
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268

Query: 595 TAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +  ++ E LD+ L   + T N LI  LC E +V  A     KLLG
Sbjct: 269 SKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK----KLLG 309



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 12/348 (3%)

Query: 307 CKKGWTEKAFRL-FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           CK G       L F  L+      P++ ++  ++SG  K +  ++   L  +M+  GL  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  T   L+   C V      +     + + G +PNI  YN +I GLC + R+ EA  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV------KAGLNPDIHAYTTLI 479
            +  +     D +TY  L+           AL L   M+      +    P++  Y  ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C+  +  E+++ F+E  T G+ P+  +Y S+I G+   G    + +    M   G  
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD +T+  LI  LCK+ K+ EA +    MI  GI P  VT  +L   +C  GD  +A  +
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 600 LESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQNV 642
             S+  K     + + N LI       +V  A   ++++L  GK  NV
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390



 Score = 45.4 bits (106), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 38/176 (21%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           + + NF+   E + C++    + G+L                                  
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKL---------------------------------- 476

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            E A E+F+++   G   +  +Y +M+  +CR G+V +A+  +  M   G   D  T   
Sbjct: 477 -ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           L+  F +      +++  +LL  M +K   P+  T ++++D L K    ++   L 
Sbjct: 536 LMRGFYES---NKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 219/427 (51%), Gaps = 23/427 (5%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G  +D    T L+ 
Sbjct: 84  ADEVTPNLC---------TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC +  +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRK 618
           +++E MI + +SP  +   +L +  C   + D A  + ILE LD+ + + T+  N++I  
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL-ILEMLDRGICLDTIFFNSIIDS 488

Query: 619 LCSEKRV 625
            C E RV
Sbjct: 489 HCKEGRV 495



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +    EM + G+     T N ++   C+   ++ A EV   M   G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  +V  YC  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG---RCT 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 380

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+ K+++A ++  +M++QGL P+T TY ++I   CK G  E A    + M  E  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I  LC   +  +A EL+ +   R +  D I +  ++  H K+    ++  
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ P+I  Y+TLI  +C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 232/511 (45%), Gaps = 80/511 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           ++G  C  G ++        +  +G   DA ++  ++   C   R ++A D  L  M   
Sbjct: 97  LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKG 310
           G I +  +  +L+   CD+      ++A ELL+ M   G    P+V ++T +I+G  K+G
Sbjct: 157 GCIPNVFSYNILLKGLCDENRS---QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+  + +++      PNV TY ++I+  CK + M++A  +L  M + G++PN  TY
Sbjct: 214 DLDKAYGTYHEML-DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++     +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 431 RELQADKITY-----------------------------------TILLSEHLKQAETKQ 455
           R L+ +  TY                                   +IL+  + KQ +  Q
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI- 514
           A+ +F +M + GLNPD   Y T+I   C+  +++++ ++F++ I   L P    Y S+I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 515 -----------------------C-----------GYLRDGNISSAVKYFQRMNQIGCAP 540
                                  C            + ++G +  + K F  M +IG  P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           + ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   YCK      A+++ 
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
             +ES      I T N +++ L   +R   A
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAA 603



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 231/495 (46%), Gaps = 8/495 (1%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNCR-TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +G    + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQG---KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  +   P    Y ++I   C  +K ++A+ L+  M ++G+  +T  + S+I  HCK 
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    +  L DLM + G  PNI  Y+ +IDG C  G++ EA +LL       ++ D +TY
Sbjct: 493 GRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K +  + AL LF  M  +G++PDI  Y  ++    + ++   +++ +     
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L K  + DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           A   + ++   G+ P   T   +A    +QG       +  S+++       R +N+++R
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 618 KLCSEKRVGMAALFF 632
           KL     +  A  + 
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 15/277 (5%)

Query: 374 IYG-HCKVGNFER--------AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           IYG +C + +  R         Y+ M   G +  TPN+  Y  +I   C  GR+   +  
Sbjct: 54  IYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAA 113

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFC 483
           L    ++  + D I +T LL        T  A+ +   RM + G  P++ +Y  L+   C
Sbjct: 114 LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173

Query: 484 RQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            + + +E+ +  Q     G    P   +YT++I G+ ++G++  A   +  M   G  P+
Sbjct: 174 DENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY ++I+ LCK   +D+A +   SM+  G+ P   T  ++ + YC  G    A+  L+
Sbjct: 234 VVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +     +  + T N+L+  LC   R   A   F  +
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 218/426 (51%), Gaps = 7/426 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +M+  +CR  ++  A   +  ++  G   +  T + LI   C   
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC--- 169

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A EL++ MV  G KP++ T   L++GLC  G   +A  L  K+V     +PN 
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNA 228

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +++  CK  +   A  LL +M+E+ +  +   Y+ +I G CK G+ + A++L + 
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G T NI  YN +I G C  GR  +  +LL+   +R++  + +T+++L+   +K+ +
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  L   M+  G+ PD   YT+LI  FC++  + ++ +     ++ G  P   T+  
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   I   ++ F++M+  G   D +TY  LI G C+  KL+ A + ++ M+ + 
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
           + P  VT   L    C  G+S  A+ I E ++K   +L I   N +I  +C+  +V  A 
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 630 LFFHKL 635
             F  L
Sbjct: 529 DLFCSL 534



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 206/439 (46%), Gaps = 4/439 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   +V  M   G      T+N +V   C  G    A  + D+M   G   +A +Y
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+   A   L  M +R   LD    +++I   C     GS+  AF L  E
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK---HGSLDNAFNLFNE 288

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG   N+ T+ +LI G C  G  +   +L   +++     PNV T++ +I  + KE 
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEG 347

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  AE L + M  +G+ P+T TYTSLI G CK  + ++A  ++DLM  +GC PNI  +N
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G CK  R+ +  EL +K   R + AD +TY  L+    +  +   A  LF  MV  
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P+I  Y  L+   C   + +++ + F++   + +      Y  +I G      +  A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  +   G  P   TY  +I GLCK+  L EA   +  M   G +P   T   L   
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587

Query: 587 YCKQGDSATAMIILESLDK 605
           +   GD+  ++ ++E L +
Sbjct: 588 HLGDGDATKSVKLIEELKR 606



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 192/365 (52%), Gaps = 8/365 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++ A  +F+EM  +G+  +  +Y +++  +C  GR  +  + L  M+ R    + 
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T ++LI +F  +G    +++A EL +EM+ +G  P+  T+T LIDG CK+   +KA ++
Sbjct: 334 VTFSVLIDSFVKEG---KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            + L+ S    PN+ T+  +I+GYCK  +++    L  +M  +G++ +T TY +LI G C
Sbjct: 391 -VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G    A +L   M      PNI  Y  ++DGLC  G  ++A E+ +K  + +++ D  
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y I++      ++   A  LFC +   G+ P +  Y  +I   C++  + E+E  F++ 
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----SGLCK 554
              G  P   TY  +I  +L DG+ + +VK  + + + G + D  T   +I     G  K
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLK 629

Query: 555 QSKLD 559
           +S LD
Sbjct: 630 KSFLD 634



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 191/394 (48%), Gaps = 4/394 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V+     G+  E   ++ +M   G      T   V+ + C+ G    A E+  +M 
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  DA  Y +++   C+ G +  A    + M  +G   +  T  +LI  FC+ G   
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG--- 312

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                 +LL +M+++   PNV T +VLID   K+G   +A  L  +++      P+  TY
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITY 371

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T++I G+CKE  +++A  +++ M  +G  PN  T+  LI G+CK    +   +L   M  
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN +I G C+ G++  A EL ++   R++  + +TY ILL       E+++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +F ++ K+ +  DI  Y  +I   C   K+ ++   F      G+ P  +TY  MI 
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           G  + G +S A   F++M + G APD  TY  LI
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 215/473 (45%), Gaps = 13/473 (2%)

Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           AH +  +  M++ F    +L   FS + ++   G    T T + ++   C  G V  A E
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           + D M   G   D  +   +V   C  G+  EA   +  M++ G   +  T   ++   C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G       A ELL +M  +  K +   ++++IDGLCK G  + AF LF ++       
Sbjct: 240 KSG---QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGIT 295

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            N+ TY  +I G+C   + +    LL  M ++ + PN  T++ LI    K G    A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P+   Y ++IDG CK+  + +A +++     +    +  T+ IL++ + K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                  L LF +M   G+  D   Y TLI  FC   K+  +++ FQE ++  + P   T
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +G    A++ F+++ +     D   Y  +I G+C  SK+D+A   + S+ 
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-----KLWIRTVNTLIR 617
            KG+ P   T   +    CK+G  + A ++   +++       W  T N LIR
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW--TYNILIR 586



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 33/389 (8%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  KG   N+YT +++I+  C+      AF    K+++   Y+PN  T++ +I+G 
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGL 168

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C E +++ A  L++RM E G  P+  T  +L+ G C  G    A  L+D M + GC PN 
Sbjct: 169 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++ +CK G+   A ELL+K  +R ++ D + Y+I++    K      A  LF  
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+  +I  Y  LI  FC   +  +  K  ++ I   + P   T++ +I  ++++G 
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A +  + M   G APD ITY +LI G CK++ LD+A Q  + M+ KG  P       
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP------- 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
                                     IRT N LI   C   R+      F K+  +    
Sbjct: 402 -------------------------NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436

Query: 643 DRVSLAALKNACYESNKYALFSDLSQRIA 671
           D V+   L     E  K  +  +L Q + 
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMV 465



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +  +A +L +           I ++ L S   K  +    L L  +M   G+  +++  +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I  FCR +K+  +     + I  G  P   T++++I G   +G +S A++   RM ++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD IT   L++GLC   K  EA    + M+  G  P  VT   +    CK G +A A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 597 MIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           M +L  +++   KL     + +I  LC    +  A   F+++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 114/279 (40%), Gaps = 3/279 (1%)

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A DL   M      P +  ++ +   + K  +      L K+   + +  +  T +I+
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++   +  +   A     +++K G  P+   ++TLI   C + ++ E+ +     +  G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   T  +++ G    G  + A+    +M + GC P+ +TYG +++ +CK  +   A +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLC 620
               M  + I    V    +    CK G    A  +   ++ K     I T N LI   C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           +  R    A     ++ +  N + V+ + L ++  +  K
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 32/235 (13%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ++Y   L   L   +   A+ LF  M+ +   P +  ++ L +A  + K+        ++
Sbjct: 54  LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G+     T + MI  + R   +  A     ++ ++G  P+ IT+  LI+GLC + +
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           + EA +  + M+  G  P  +T                                +NTL+ 
Sbjct: 174 VSEALELVDRMVEMGHKPDLIT--------------------------------INTLVN 201

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            LC   +   A L   K++      + V+   + N   +S + AL  +L +++ E
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256



 Score = 45.4 bits (106), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 24/181 (13%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y +    L  NG  E+A E+       F +I + K             + L     N ++
Sbjct: 476 YKILLDGLCDNGESEKALEI-------FEKIEKSK-------------MELDIGIYNIII 515

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C    V+ A ++F  +  +GV     +Y +M+   C+ G ++EA+     M + G  
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D  T  +LI A       G   ++ +L+EE+ R G+  +  T  ++ID L   G  +K+
Sbjct: 576 PDGWTYNILIRAHLGD---GDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631

Query: 316 F 316
           F
Sbjct: 632 F 632


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 200/421 (47%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+ +    + +   +G      T +  V   C+ G V++A +V   M 
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y  ++   C  G + EA   ++ M+D G + D  T   LI A C +    
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN--- 385

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  E+  KG  PNVYT  +LI+ LCK G    A RLF ++ +S    P+  TY
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEVTY 444

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+ +A  LL+ M+  G   +T TY ++I G CK    E A ++ D M  
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   N   +N +IDGLC   R+ +A EL+ +     LQ + +TY  +L+ + KQ    +
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISK 564

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+ ++ + + K  +     G+ PT + Y  +I 
Sbjct: 565 AADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQ 624

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  N   A+  F+ M ++G  PD  TY  +  GLC+    + EA  F   M   G  
Sbjct: 625 SLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI 684

Query: 575 P 575
           P
Sbjct: 685 P 685



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 234/485 (48%), Gaps = 12/485 (2%)

Query: 152 AHEV----MQCMVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVEY 206
            HEV    +Q  + S+A +    + F +V  ++   G+   T   N ++ +  E   ++ 
Sbjct: 120 GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKL 179

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
            E  + EM ++G+  D  ++  ++ A CR  +   A   L  M       D  T T L+ 
Sbjct: 180 LESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLME 239

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F ++G   SI+ A  L   M   G  P   T  VLI+G CK G    A   +++   +D
Sbjct: 240 GFVEEG---SIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALG-YIQQEIAD 295

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            ++P+  T++  ++G C+   ++ A  +L  M ++G  P+  TY+++I   C  G  E A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +++ M   GC P+   +N +I  LC + +++EA +L ++   + L  +  T+ IL++ 
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +   A+ LF  M  +G  PD   Y  LI   C   K+ ++    +E   +G   +
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY ++I G  +   I  A + F +M+  G   + IT+  LI GLC   ++D+A +  +
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            MI +G+ P  VT  ++   YCKQG+ + A  IL+++     ++ + T  TLI  LC  +
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595

Query: 624 RVGMA 628
           R   A
Sbjct: 596 RTQAA 600



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 234/496 (47%), Gaps = 6/496 (1%)

Query: 112 GSMVALSFFYWAIG-FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLK 170
           G  V L      IG +A+ + F   + + +  L   G  +   EV   +++  AE  ++K
Sbjct: 120 GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFG-VQANTEVYNHLLTVLAEGSKIK 178

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
              S   EM++ G+     T N V+   C       A  + +EM +  V  D +++  ++
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
             +   G +  A R  + M + G    + T+ +LI  +C     G +  A   +++ +  
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK---LGRVGDALGYIQQEIAD 295

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G++P+  T +  ++GLC+ G  + A ++ L L+  +  +P+V+TY+ +I+  C   ++  
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKV-LGLMLQEGCEPDVYTYSTVINCLCNNGELEE 354

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ ++ +M + G LP+T T+ +LI   C     E A DL   +  +G +PN+Y +N +I+
Sbjct: 355 AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILIN 414

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK G    A  L ++        D++TY IL+       +  +AL L   M  +G   
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
               Y T+I   C++++++E+E+ F +    G+     T+ ++I G      I  A +  
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            +M   G  P+N+TY ++++  CKQ  + +A    ++M   G     VT  TL    CK 
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594

Query: 591 GDSATAMIILESLDKK 606
             +  A+ +L  +  K
Sbjct: 595 RRTQAALKLLRGMRMK 610



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 5/377 (1%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +G +P+V T   +ID LC+      A  L L+ + S +  P+  T+T ++ G+ +E
Sbjct: 186 EMSSQGIEPDVVTFNTVIDALCRARQARTAV-LMLEEMSSCDVAPDETTFTTLMEGFVEE 244

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A  L  RM E G  P + T   LI G+CK+G    A   +     +G  P+   +
Sbjct: 245 GSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +  ++GLC+ G V  A ++L    Q   + D  TY+ +++      E ++A G+  +MV 
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           +G  PD   + TLI A C + +++E+    +E    GL P   T+  +I    + G+   
Sbjct: 365 SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL 424

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           AV+ F+ M   GC PD +TY  LI  LC   KL +A    + M   G     VT  T+  
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIID 484

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             CK+     A  + + +D     R   T NTLI  LC+ +R+  AA    +++ +    
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544

Query: 643 DRVSL-AALKNACYESN 658
           + V+  + L + C + N
Sbjct: 545 NNVTYNSILTHYCKQGN 561



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 181/410 (44%), Gaps = 6/410 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I++G FE         V+   + G +     ++  M   G      T + V+   C  G 
Sbjct: 293 IADG-FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE 351

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A+ + ++M   G   D +++  ++VA C   ++ EA      +  +G   +  T  +
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A C     G    A  L EEM   G  P+  T+ +LID LC  G   KA  L  ++ 
Sbjct: 412 LINALCKV---GDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S   +  V TY  +I G CK  ++  AE + ++M   G+  N  T+ +LI G C     
Sbjct: 469 VSGCPQSTV-TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERI 527

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A +L+D M  EG  PN   YN+I+   CK+G + +A ++L+       + D +TY  L
Sbjct: 528 DDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATL 587

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++   K   T+ AL L   M   G+ P   AY  +I +  R    +++   F+E    G 
Sbjct: 588 INGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGG 647

Query: 504 FPTKETYTSMICGYLRDGN-ISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            P   TY  +  G  R G  I  A  +   M   G  P+  ++  L  GL
Sbjct: 648 PPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/295 (19%), Positives = 98/295 (33%), Gaps = 66/295 (22%)

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           ++ GL P+ + Y  +I      G F+    L+  M +EG    +    + I    +    
Sbjct: 82  RDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLF 141

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A++L+                               L +F      G+  +   Y  L
Sbjct: 142 DDAFDLVSNQ----------------------------LDMF------GVQANTEVYNHL 167

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +       K+K  E  + E  + G+ P   T+ ++I    R     +AV   + M+    
Sbjct: 168 LTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDV 227

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           APD  T+  L+ G  ++  ++ A +    M   G SP  VT                   
Sbjct: 228 APDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT------------------- 268

Query: 599 ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                        VN LI   C   RVG A  +  + +      DRV+ +   N 
Sbjct: 269 -------------VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNG 310



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 40/237 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++       R+ +   +V +M + GL     T N ++   C+ G +  A ++   M A G
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM----------------------------- 249
              D  +Y  ++   C+  R   A + L  M                             
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636

Query: 250 ------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                  + G   D  T  ++    C  G  G IK+AF+ L EM   G+ P   +  +L 
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGLCRGG--GPIKEAFDFLVEMADNGFIPEFSSFRMLA 694

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +GL   G  +   R    +V   N++    +  + I GY +  K   A     R+ E
Sbjct: 695 EGLLNLGMDDYLIRAIELIVEKANFR---ESDISAIRGYLRIRKYYDAIATFGRLLE 748


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 222/450 (49%), Gaps = 39/450 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F+++G +K  FS+  ++   G      T   ++   C  G V  A    D++ A+G
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWL---------------SAMLD---RGAILDNA- 259
              D  SY  ++   CR+G    A + L               S ++D   +  ++++A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 260 ----------------TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                           T + LI+ FC     G +K A +L   M+     PNVYT ++LI
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFC---VVGKLKYAVDLFNRMISDNINPNVYTFSILI 275

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DG CK+G   +A +  L ++   N K +V TY +++ GYC  +++N+A+ L   M ++G+
Sbjct: 276 DGFCKEGKVREA-KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  +Y+ +I G CK+   + A  L + M  +   PN+  YN+++DGLCK GR   A E
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+ +   R   ++ ITY  +L    K     +A+ L  ++ + G+ PDI  YT LI   C
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC 454

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ +++K F++ +  G  P   TYTS+I G+   G     +    +M   GC P+ I
Sbjct: 455 KVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAI 514

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGI 573
           TY  LI  L ++ + D+A +    MI +G+
Sbjct: 515 TYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 226/445 (50%), Gaps = 8/445 (1%)

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           NN +P       +++G   +    + A  +  +M   G+  D  +  L++  + ++G + 
Sbjct: 52  NNPIPPAIE-FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            +    + +L +G   D  T T+LI   C    +G + +A    +++V +G++ +  ++ 
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLC---LKGEVHKALYFHDKVVAQGFQLDQVSYG 167

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI+GLC+ G T+ A +L L+ V     +PNV  Y+ +I   CK++ +N A  L   M  
Sbjct: 168 TLINGLCRVGETKAAVQL-LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS 226

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           + + P+  TY+SLI G C VG  + A DL + M  +   PN+Y ++ +IDG CK+G+V+E
Sbjct: 227 KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVRE 286

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  +L    ++ ++ D +TY  L+  +    +  +A  LF  M + G+ PD+ +Y+ +I 
Sbjct: 287 AKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+ K + E+ K F+E     +FP   TY S++ G  + G  S A++    M+  G   
Sbjct: 347 GFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPS 406

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           + ITY +++  +CK + +D+A      +  KGI P   T   L    CK G    A  + 
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466

Query: 601 ESLDKKLW---IRTVNTLIRKLCSE 622
           E L  K +   I T  +LI   C++
Sbjct: 467 EDLLVKGYSPNIYTYTSLINGFCNK 491



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 154/323 (47%), Gaps = 7/323 (2%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LF +L+  +N  P    +  ++    K ++   A  L ++M+  G+ P+  T   L+   
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            ++G+ + ++ +   + K+G  P+   +  +I GLC KG V +A     K   +  Q D+
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ++Y  L++   +  ETK A+ L  R+    + P++  Y+T+I + C+ K + ++   + E
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            ++  + P   TY+S+I G+   G +  AV  F RM      P+  T+  LI G CK+ K
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIIL---ESLDKKLWIRTV 612
           + EA      M+ K +    VT  +L   YC  KQ + A ++  +     +   +W  ++
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 613 NTLIRKLCSEKRVGMAALFFHKL 635
             +I   C  K V  A   F ++
Sbjct: 344 --MINGFCKIKMVDEAMKLFEEM 364



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ F +I  + E   +  EM    +     T N +V   C+ G    A E+ DEM  RG
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             ++  +Y  ++ A C+   V +A   L+ + ++G   D  T T+LI   C     G + 
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK---VGRLD 460

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ E+++ KG+ PN+YT+T LI+G C KG+ ++   +  K+ + +   PN  TY  +
Sbjct: 461 DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM-KDNGCIPNAITYEIL 519

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I    ++++ ++AE LL  M  +GLL
Sbjct: 520 IHSLFEKDENDKAEKLLREMIARGLL 545



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 459 LFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           LF R++ K    P    +  ++ +  + K+ + +    Q+    G+ P   T   ++  +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G+I  +   F ++ + G  PD +T+  LI GLC + ++ +A  F++ ++ +G    +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHK 634
           V+  TL    C+ G++  A+ +L  +D KL    V   +T+I  +C +K V  A   + +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 635 LLGKDQNVDRVSLAAL 650
           ++ K  + D V+ ++L
Sbjct: 224 MVSKRISPDVVTYSSL 239


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 243/522 (46%), Gaps = 23/522 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y    + L+ +G F++AH+V   M               + SF +  R      ++  M+
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G  +       VVG   E        E+F +M A GV    S++  ++   C+ G V 
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           E ++ L  ++ RG + +  T  L I   C    RG +  A  ++  ++ +G KP+V T+ 
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ---RGELDGAVRMVGCLIEQGPKPDVITYN 290

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI GLCK    ++A  ++L  + ++  +P+ +TY  +I+GYCK   +  AE ++     
Sbjct: 291 NLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G +P+  TY SLI G C  G   RA  L +    +G  PN+  YN +I GL  +G + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +  ++ L  +  T+ IL++   K      A GL   M+  G  PDI  +  LI 
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +  Q KM+ + +     +  G+ P   TY S++ G  +       ++ ++ M + GCAP
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           +  T+  L+  LC+  KLDEA    E M  K ++P  VT  TL   +CK GD   A  + 
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589

Query: 601 ESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             +++   +     T N +I     +  V MA   F +++ +
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 258/584 (44%), Gaps = 52/584 (8%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM--- 159
           V A +  +   M AL  F        F+H +  Y      L   G FE   EV+  M   
Sbjct: 10  VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69

Query: 160 -------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                        + ++   G+++E  ++   M          + N ++ +  + G  + 
Sbjct: 70  VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +V+  M  RG+  D  S+ + + ++C+  R   A R L+ M  +G  ++      ++ 
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189

Query: 267 AFCDKGF--------------------------------RGSIKQAFELLEEMVRKGWKP 294
            F ++ F                                +G +K+  +LL++++++G  P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N++T+ + I GLC++G  + A R+   L+     KP+V TY  +I G CK  K   AE+ 
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVY 308

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L +M  +GL P++ TY +LI G+CK G  + A  ++      G  P+ + Y ++IDGLC 
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G    A  L  +A  + ++ + I Y  L+     Q    +A  L   M + GL P++  
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  L+   C+   + +++   +  I+ G FP   T+  +I GY     + +A++    M 
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  PD  TY +L++GLCK SK ++  + Y++M+ KG +P   T   L    C+     
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
            A+ +LE +  K       T  TLI   C    +  A   F K+
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 249/563 (44%), Gaps = 60/563 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F E     EG+ +  +M  +G+ L  ST N+++ + C+ G V+  E++ D++  RG
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y L +   C+ G +  A R +  ++++G   D  T   LI   C        +
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK---NSKFQ 303

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A   L +MV +G +P+ YT+  LI G CK G  + A R+    V  + + P+  TY ++
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV-FNGFVPDQFTYRSL 362

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C E + NRA  L      +G+ PN   Y +LI G    G    A  L + M ++G 
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  +N +++GLCK G V +A  L+K    +    D  T+ IL+  +  Q + + AL 
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+  G++PD++ Y +L+   C+  K ++  + ++  +  G  P   T+  ++    
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC---------------- 562
           R   +  A+   + M      PD +T+G LI G CK   LD A                 
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602

Query: 563 --------------------QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
                               + ++ M+ + + P   T   +   +CK G+       L  
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662

Query: 603 LDKKLWIRTVNTL---IRKLCSEKRVGMAALFFHKLLGKDQ---------NVDRVSLAA- 649
           + +  +I ++ TL   I  LC E RV  AA   H+++ K           +VD+  +AA 
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAP 722

Query: 650 -------LKNACYESNKYALFSD 665
                  LK +C     Y L  D
Sbjct: 723 KLVLEDLLKKSCITYYAYELLFD 745



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 4/364 (1%)

Query: 279 QAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A E+   M ++ G+K  + T+  +I+ L   G  E    + + +  +         Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            +  Y ++ K+  A  + ERM      P   +Y +++      G F++A+ +   M   G
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            TP++Y++   +   CK  R   A  LL     +  + + + Y  ++    ++    +  
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF +M+ +G++  +  +  L+   C++  +KE EK   + I  G+ P   TY   I G 
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  AV+    + + G  PD ITY  LI GLCK SK  EA  +   M+ +G+ P  
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
            T  TL   YCK G    A  I+       ++    T  +LI  LC E     A   F++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 635 LLGK 638
            LGK
Sbjct: 382 ALGK 385


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 209/414 (50%), Gaps = 4/414 (0%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM     PL        +   CE+  ++ A  +   M ++GV   A  Y +++   CR  
Sbjct: 185 EMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNN 244

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV EA    ++M++RG + D  T   L+  FC       ++ A E+ ++M+   + P+V 
Sbjct: 245 RVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTE---ELEMALEMTDDMLSLHFVPSVA 301

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           + + ++DGL K+G  +KAFRL   L       PN+    A+I   CK+ +   AE L   
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGEL-GMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL PN  TY  LI+  CK G  + A  + D M ++G    +Y YN++I+G C+   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A  LL +  ++ L     +Y+ L++   ++ +   A+ L   M + G++ +++ +TT
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI+ FC+   M E+ + F + I + + P + T+  MI GY R GN+  A + + +M   G
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             PDN TY +LIS LC      +A +F + +    +     +  TL Y +CK+G
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEG 594



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 8/490 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R +E   +   M N GL     T   ++   C+ G+++ A  +FD M  +G+      Y 
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  YC+     +A   L+ M+++G     A+ + LI   C KG    +  A EL  EM
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKG---DLASAMELHREM 466

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            R G   NVYT T LI G CK G  ++A RLF K++ S +  PN  T+  MI GYC+   
Sbjct: 467 ARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDS-SVVPNEVTFNVMIEGYCRVGN 525

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           + +A  L ++M ++GL P+  TY SLI   C      +A + +D +       N ++   
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++ G CK+GR+ E Y +  +   R ++ D I++T+++   LK  + ++   LF  M + G
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + PD   +T +I    +++ + ++   + + I  G  P   TYT +I    + G +SSA 
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQ 705

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
              + M      P++ TY   +  L  + +L++A +   + I +G     VT  TL   +
Sbjct: 706 ILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGF 764

Query: 588 CKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           CK G    A+ ++++  +  +     + +T+I +LC    +  A   ++++L K    D 
Sbjct: 765 CKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDI 824

Query: 645 VSLAALKNAC 654
           V+   L   C
Sbjct: 825 VAYNILIRWC 834



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 223/513 (43%), Gaps = 72/513 (14%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ EI  L     ++  M + G+       N ++   C    V  A EV + M  RG+
Sbjct: 202 IRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGI 261

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF-----CDKGFR 274
            AD  +Y+ +V  +CR   +  A      ML    +   A+ + ++         DK FR
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFR 321

Query: 275 GS---------------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +                            ++A  L   M  +G +PN  T+ +LI  LC
Sbjct: 322 LACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLC 381

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G  + A  +F ++ R    +  V+ Y ++I+GYC+ +  ++A  LL  M E+GL P+ 
Sbjct: 382 KRGMMDDALCMFDRM-REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y+ LI G C+ G+   A +L   M + G + N+Y +  +I G CK G + EA  L  K
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDK 500

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY------------ 475
                +  +++T+ +++  + +    ++A  L+ +MV  GL PD + Y            
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLG 560

Query: 476 -----------------------TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
                                  TTL+  FC++ ++ E+   + E    G+     ++T 
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTV 620

Query: 513 MICGYLR--DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++   L+  DG   S +  F+ M + G  PDN+ +  +I    K+  + +A   ++ MI 
Sbjct: 621 IVYAALKLHDGEKISVL--FREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIA 678

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G SP  VT   L    CK G  ++A I+ E +
Sbjct: 679 DGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 187/372 (50%), Gaps = 15/372 (4%)

Query: 256 LDNATLTLLITAFCD----KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           LD    T  I A+C+     G RG       LL  M  KG K +   + VL+ GLC+   
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARG-------LLTRMESKGVKGSAVPYNVLMYGLCRNNR 245

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             +A  +   +V        V TY  ++ G+C+ E++  A  + + M     +P+  + +
Sbjct: 246 VLEAVEVKNSMVERGIVADEV-TYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCS 304

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            ++ G  K G+ ++A+ L   +G+ G  PN++A NA+ID LCK  R +EA  L +    R
Sbjct: 305 FMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANR 364

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L+ +++TY IL+    K+     AL +F RM + G+   ++ Y +LI  +C+     ++
Sbjct: 365 GLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQA 424

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                E +  GL P+  +Y+ +I G  R G+++SA++  + M + G + +  T+  LISG
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIR 610
            CK   +DEA + ++ MI   + P EVT   +   YC+ G+   A  + + + D+ L   
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544

Query: 611 --TVNTLIRKLC 620
             T  +LI  LC
Sbjct: 545 NYTYRSLISVLC 556



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 193/411 (46%), Gaps = 5/411 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G L     +  EM  NG+     T   ++   C+ G ++ A  +FD+M    
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  ++ +M+  YCR+G V +A +    M+DRG   DN T   LI+  C     G++K
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLT--LGAMK 563

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E ++++       N ++ T L+ G CK+G   + + ++ ++ R+   K ++ ++T +
Sbjct: 564 -AKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM-RARGVKLDLISFTVI 621

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    K     +  +L   MKE+G+ P+   +T +I  H K  N  +A +  D M  +GC
Sbjct: 622 VYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGC 681

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  Y  +I+ LCK G +  A  L ++        +  TY   L     + E ++A  
Sbjct: 682 SPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKV 741

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   +++  L   +  + TLI  FC+  +++ +    Q    +G FP   +Y+++I    
Sbjct: 742 LHATILEGCLANTV-TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELC 800

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           + G+I+ A + +  M   G  PD + Y  LI       + D+    Y  M+
Sbjct: 801 KVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 5/172 (2%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S +L+    + A  +    + +G+    +  + ++ A  + ++   +   F E +    F
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCK-F 191

Query: 505 PTKE-TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           P  E  YT+ I  Y    N+  A     RM   G     + Y  L+ GLC+ +++ EA +
Sbjct: 192 PLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVE 251

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
              SM+ +GI   EVT  TL Y +C+  +   A   LE  D  L +  V ++
Sbjct: 252 VKNSMVERGIVADEVTYRTLVYGFCRTEELEMA---LEMTDDMLSLHFVPSV 300


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 260/552 (47%), Gaps = 22/552 (3%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYI----------VCATS-----LISNG 147
           V A L ++    VAL FFYWA    ++RH   +Y           +C  S     L+   
Sbjct: 177 VCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRR 236

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
              R  E    ++ S++  G+L++   ++  M   G+       N  + +      +E A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
               + M   G+  +  +Y  M+  YC + RV EA   L  M  +G + D  +   ++  
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 268 FCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            C +     I +  +L+++M ++ G  P+  T+  LI  L K    ++A   FLK  +  
Sbjct: 357 LCKEK---RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL-WFLKDAQEK 412

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFER 385
            ++ +   Y+A++   CKE +M+ A+ L+  M  +G   P+  TYT+++ G C++G  ++
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L+ +M   G  PN  +Y A+++G+C+ G+  EA E++  + +     + ITY++++ 
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              ++ +  +A  +   MV  G  P       L+ + CR  +  E+ KF +E +  G   
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               +T++I G+ ++  + +A+     M  I    D  TY  L+  L K+ ++ EA +  
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKR 624
           + M+ KGI P  VT  T+ + YC+ G     + ILE +  +   RT+ N +I KLC   +
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGK 712

Query: 625 VGMAALFFHKLL 636
           +  A     K+L
Sbjct: 713 LEEADTLLGKVL 724



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 171/383 (44%), Gaps = 48/383 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V +  + GR+ E   ++ EM + G  P    T   VV   C LG V+ A+++   M   
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--G 275
           G   +  SY  ++   CR G+  EA   ++   +     ++ T ++++      G R  G
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM-----HGLRREG 538

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A +++ EMV KG+ P      +L+  LC+ G T +A R F++   +     NV  +
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEECLNKGCAINVVNF 597

Query: 336 TAMISGYCKEEKMN-----------------------------------RAEMLLERMKE 360
           T +I G+C+ ++++                                    A  L+++M  
Sbjct: 598 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 657

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           +G+ P   TY ++I+ +C++G  +    +++ ++ ++ C      YN +I+ LC  G+++
Sbjct: 658 KGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLE 714

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  LL K  +   ++D  T   L+  +LK+     A  + CRM    L PD+     L 
Sbjct: 715 EADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLS 774

Query: 480 AAFCRQKKMKESEKFFQEAITAG 502
                + K+ E++K     +  G
Sbjct: 775 KRLVLKGKVDEADKLMLRLVERG 797



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G+     A++ ++ ++ R  +++++ K       AG+ P      + I  ++R   
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A+++ +RM  +G  P+ +TY  +I G C   +++EA +  E M  KG  P +V+  T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +    CK+        +++ + K+  +     T NTLI  L        A  F      K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412

Query: 639 DQNVDRVSLAALKNACYESNKYALFSDL 666
              +D++  +A+ +A  +  + +   DL
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDL 440


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 198/377 (52%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G ++ + ++   +   G+  +   Y  ++   C+ G +  A  +   M + G + + 
Sbjct: 173 CENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQ 232

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI     KG +   K  F+L E+M   G  PN+YT+  L++  C +G   +AF L
Sbjct: 233 YTFTVLINGLFKKGLK---KDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDL 289

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R    + NV TY  +I G C+EE++  AE L+++MK+  + PN  TY +LI G C
Sbjct: 290 FDEM-RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFC 348

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VGN ++A  L+D +   G +P++  YN +I+G  K G  +   +L ++   R +   K+
Sbjct: 349 DVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKV 408

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T T+L+  +++  E ++A  ++  M K GL PD++ Y  LI   C +  MKES K F+  
Sbjct: 409 TCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P+   Y +MI GY ++ N   A++  + M   G  P+  +Y ++I  LCK  K 
Sbjct: 469 GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKW 528

Query: 559 DEACQFYESMIGKGISP 575
           +EA    + MI   + P
Sbjct: 529 EEAEVLLDKMIELQLKP 545



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 201/426 (47%), Gaps = 5/426 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + GL    +  N ++G        E A   F+E+  R V  D  S+ +M+   C  G
Sbjct: 118 EMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENG 176

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + ++ + L  + D G   +    T LI   C     G I++A    ++M   G   N Y
Sbjct: 177 NLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK---NGDIERARLFFDKMGEMGLVANQY 233

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T TVLI+GL KKG  +  F LF K+ + +   PN++TY  +++ YC E K+ RA  L + 
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKM-KINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDE 292

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+E+G+  N  TY +LI G C+      A  L+D M K   +PN+  YN +I G C  G 
Sbjct: 293 MRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGN 352

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A  LL +     L    +TY IL+  + K    K    L   M   G++P     T 
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTV 412

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI A+ R ++M+++ + +      GL P    Y  +I G    GN+  + K F+ M ++ 
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH 472

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P ++ Y  +I G CK+     A +    M  KG+ P   +  ++    CK G    A 
Sbjct: 473 VEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAE 532

Query: 598 IILESL 603
           ++L+ +
Sbjct: 533 VLLDKM 538



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 14/406 (3%)

Query: 277 IKQAFELLEEMVRKG--WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           + +A     EMV KG  ++PN++    L+  L +    EKA+  F +L   +  K +V++
Sbjct: 109 LDKALIFFNEMVDKGLVFRPNIFNS--LLGSLVRSNCFEKAWLFFNEL--KERVKFDVYS 164

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  MI G C+   ++++  LL  +++ GL PN   YT+LI G CK G+ ERA    D MG
Sbjct: 165 FGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMG 224

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   N Y +  +I+GL KKG  ++ ++L +K     L  +  TY  L++E+  + +  
Sbjct: 225 EMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKIC 284

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M + G+  ++  Y TLI   CR++++ E+EK   +   A + P   TY ++I
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+   GN+  A     ++   G +P  +TY  LI G  K             M G+GIS
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P +VT   L   Y +  +   A  I  S++K   +  V     LI  LC +  +  ++  
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKL 464

Query: 632 FHKLLGKDQNV---DRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
           F  +   + +V   D +    +   C E N Y     L +  A+G+
Sbjct: 465 FRSM--GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGL 508



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 39/383 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    E G L + F ++  + + GL         ++   C+ G +E A   FD+M   G
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMG 227

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+  ++ +++    + G   +       M   G   +  T   L+  +C +G    I 
Sbjct: 228 LVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG---KIC 284

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF+L +EM  +G + NV T+  LI G+C++    +A +L  ++ ++    PN+ TY  +
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA-VSPNLITYNTL 343

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF--------------- 383
           I G+C    +++A  LL+++K  GL P+  TY  LI G+ K GN+               
Sbjct: 344 IGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGI 403

Query: 384 --------------------ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                               E+A+ +   M K G  P++Y Y  +I GLC KG ++E+ +
Sbjct: 404 SPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSK 463

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L +   +  ++   + Y  ++  + K+  + +AL L   M   GL P++ +Y+++I   C
Sbjct: 464 LFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLC 523

Query: 484 RQKKMKESEKFFQEAITAGLFPT 506
           +  K +E+E    + I   L P+
Sbjct: 524 KDGKWEEAEVLLDKMIELQLKPS 546



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 160/368 (43%), Gaps = 54/368 (14%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-------------- 324
           QA  L    +++G++   ++ + L+  L        A  L L+++               
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 325 ---SDNYKPNVHT---YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL----- 373
              + N  P++ T   Y ++I+ + K + +++A +    M ++GL+   N + SL     
Sbjct: 80  HHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLV 139

Query: 374 -----------------------------IYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
                                        I G C+ GN ++++ L+ L+   G +PN+  
Sbjct: 140 RSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVI 199

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +IDG CK G ++ A     K  +  L A++ T+T+L++   K+   K    LF +M 
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMK 259

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             GL P+++ Y  L+  +C + K+  +   F E    G+     TY ++I G  R+  + 
Sbjct: 260 INGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVW 319

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A K   +M +   +P+ ITY  LI G C    LD+A    + +   G+SP  VT   L 
Sbjct: 320 EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379

Query: 585 YEYCKQGD 592
             Y K G+
Sbjct: 380 EGYSKAGN 387



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 4/241 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +V +M    +     T N ++G  C++G ++ A  + D++ + G+     +Y 
Sbjct: 317 RVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYN 376

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++  Y + G           M  RG      T T+LI A+        +++AF++   M
Sbjct: 377 ILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVR---LQEMEKAFQIYSSM 433

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            + G  P+VY + VLI GLC KG  +++ +LF + +   + +P+   Y  MI GYCKE+ 
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLF-RSMGEMHVEPSDVIYNTMIHGYCKEDN 492

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
             RA  LL  M+ +GL+PN  +Y+S+I   CK G +E A  L+D M +    P+    N 
Sbjct: 493 SYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNM 552

Query: 408 I 408
           I
Sbjct: 553 I 553


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 213/428 (49%), Gaps = 11/428 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+  +  +  +++  +C M  V      L+ ++  G      T T LI   C  G
Sbjct: 116 QMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG 175

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                 QA EL ++MV +G +P+VYT+T +I+GLCK G T  A  L  K+      +P+V
Sbjct: 176 ---EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV-GCQPDV 231

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY+ +I   CK+  +N A  +   MK +G+ P   +YTSLI G C    ++ A  +++ 
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNE 291

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      P+I  ++ +ID  CK+G V EA  +LK   +  ++ + ITY  L+  +  Q E
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF  M+  G  PD+ +Y+ LI  +C  K++ E+++ F E I  GL P   +YT+
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I  + + G +  A + F+ M+  G  PD  TY  L+ G CKQ  L +A + + +M G  
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           + P  V    L    CK G+   A      + +  L   + I T  T+I  LC E  +  
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT--TIINGLCKEGLLDE 529

Query: 628 AALFFHKL 635
           A   F K+
Sbjct: 530 ALEAFRKM 537



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 222/455 (48%), Gaps = 6/455 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +  +  GFS++ ++   GL     T   ++   C+ G    A E+FD+M 
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ARG   D  +Y  ++   C+MG    A   +  M + G   D  T + LI + C      
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL-- 246

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + +A ++   M  KG  P V ++T LI GLC    W E +    L  + S N  P++ T
Sbjct: 247 -VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS--AMLNEMTSLNIMPDIVT 303

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++ +I  +CKE  +  A+ +L+ M E G+ PN  TY SL++G+        A  L D+M 
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMI 363

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             GC P++++Y+ +I+G C   R+ EA +L  +   + L  + ++YT L+    +  + +
Sbjct: 364 TRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR 423

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M   G  PD+  Y+ L+  FC+Q  + ++ + F+      L P    YT +I
Sbjct: 424 EARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILI 483

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + GN++ A K F  +   G  PD   Y  +I+GLCK+  LDEA + +  M   G  
Sbjct: 484 DSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP 543

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           P E +   +   + +  D + A+ ++  +  K ++
Sbjct: 544 PNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 175/358 (48%), Gaps = 4/358 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M   G  PN  T  +LI+  C     +  F +  K+++    +P + T+T +I+G 
Sbjct: 113 LSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKL-GLQPTIITFTTLINGL 171

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK  +  +A  L + M  +G  P+  TYT++I G CK+G    A  L+  MG+ GC P++
Sbjct: 172 CKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDV 231

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y+ +ID LCK   V EA ++      + +    ++YT L+      +  K+A  +   
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNE 291

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M    + PDI  ++ LI  FC++  + E++   +     G+ P   TY S++ GY     
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K F  M   GC PD  +Y  LI+G C   ++DEA Q +  MI +G++P  V+  T
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLG 637
           L + +C+ G    A  + + +    ++    T + L+   C +  +G A   F  + G
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 4/200 (2%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT-AGLFPTKETYTSM 513
            AL  F  M+     P I  +  L++A  R ++  ++     + +  AGL P   T   +
Sbjct: 73  DALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNIL 132

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  +    ++        ++ ++G  P  IT+  LI+GLCK  +  +A + ++ M+ +G 
Sbjct: 133 INCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGC 192

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAAL 630
            P   T  T+    CK G++A A  +++ + +   +  + T +TLI  LC ++ V  A  
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALD 252

Query: 631 FFHKLLGKDQNVDRVSLAAL 650
            F  +  K  +   VS  +L
Sbjct: 253 IFSYMKAKGISPTVVSYTSL 272


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 258/584 (44%), Gaps = 40/584 (6%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P FSS S +    +SL        L S+ +  H+   P  ++    + S+   +   
Sbjct: 25  SLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYP 84

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
            V SL+N+  S       Y                                  +  +++S
Sbjct: 85  TVFSLSNQMDSFGIPPDVY---------------------------------TLNILINS 111

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           F  + R    FS++ ++   GL   T+T   ++   C  G +  A  +FD+M   G   +
Sbjct: 112 FCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPN 171

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  ++   C++G    A R L +M       D    T +I + C       + +AF 
Sbjct: 172 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR---QVTEAFN 228

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L  +MV +G  P+++T+T LI  LC     +    L  +++ S    P+V  ++ ++   
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPDVVIFSTVVDAL 287

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CKE K+  A  +++ M  +G+ PN  TY +L+ GHC     + A  + D M   G  PN+
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
            +YN +I+G CK  R+ +A  L ++  Q+EL  + +TY  L+         + A+ LF  
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           MV  G  PD+  Y  L+   C++  + E+    +    + + P  + YT +I G  R G 
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + +A   F  ++  G  P+  TY  +I+GLC++  LDEA + +  M G G SP   T  T
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
           +     +  ++  A+ +L+ +  + +   + T   L+  LC +K
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 571



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 190/397 (47%), Gaps = 8/397 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F L  +M   G  P+VYT  +LI+  C       AF +  K+++    +P+  T+T +I
Sbjct: 86  VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL-GLQPDTATFTTLI 144

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++M  +G  PN  TY +LI G CKVGN   A  L+  M +  C 
Sbjct: 145 RGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 204

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V EA+ L  K   + +  D  TYT L+       E K    L
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M+ + + PD+  ++T++ A C++ K+ E+       I  G+ P   TY +++ G+  
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M   G AP+ I+Y  LI+G CK  ++D+A   +E M  K + P  VT
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +     I  + T   L+  LC +  +  A      + 
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 637 GKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
           G + + D ++    +   C      A   +FS+LS +
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 481



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 4/341 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S   +   K   +++ +M N+ +       + VV   C+ G +  A +V D M  RG
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 307

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  +C    + EA +    M+  G   +  +   LI  +C       + 
Sbjct: 308 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQ---RMD 364

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L EEM +K   PN  T+  L+ GLC  G  + A  LF ++V +    P++ TY  +
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV-AHGQIPDLATYRIL 423

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK+  ++ A  LL+ ++   + P+   YT +I G C+ G  E A D+   +  +G 
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y  +I+GLC++G + EA +L  +        D  TY  +    L+  E  +A+ 
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 543

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           L   M+  G + D+   T L+   C  K  +  ++   E +
Sbjct: 544 LLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 19/311 (6%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSSFAEIG---------------RLKEGFSMVIEM 179
           ++     +L   G    AH+V+  M+    E                  + E   +   M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            +NG      + N ++   C++  ++ A  +F+EMC + +  +  +Y  ++   C +GR+
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A      M+  G I D AT  +L+   C K     + +A  LL+ +      P++  +
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKS---HLDEAMALLKTIEGSNMDPDIQIY 455

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T++IDG+C+ G  E A  +F  L  S   +PNV TYT MI+G C+   ++ A  L   M 
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNL-SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  P+  TY ++  G  +     RA  L+  M   G + ++     +++ LC     Q
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQ 574

Query: 420 EAYELLKKAFQ 430
              ++L +  Q
Sbjct: 575 SVKQILSEFVQ 585



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 128/323 (39%), Gaps = 38/323 (11%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             RM      P+T  +  L+    K   +   + L + M   G  P++Y  N +I+  C 
Sbjct: 55  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 114

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
             R   A+ +L K  +  LQ D  T+T L+     + +   AL LF +M+  G  P++  
Sbjct: 115 LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 174

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y TLI   C+      + +  +        P    YTS+I    +D  ++ A   F +M 
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234

Query: 535 QIGCAPDNITYGALI-----------------------------------SGLCKQSKLD 559
             G +PD  TY +LI                                     LCK+ K+ 
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLI 616
           EA    + MI +G+ P  VT   L   +C Q +   A+ + +++    +   V   NTLI
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 617 RKLCSEKRVGMAALFFHKLLGKD 639
              C  +R+  A   F ++  K+
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKE 377



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 3/209 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+ L       AL  F RM+     P    +  L+ +  + K+         +  + G+ 
Sbjct: 40  SKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIP 99

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T   +I  +        A     ++ ++G  PD  T+  LI GLC + K+ +A   
Sbjct: 100 PDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHL 159

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           ++ MIG+G  P  VT  TL    CK G++  A+ +L S+++   +  +    ++I  LC 
Sbjct: 160 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 219

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +++V  A   F K++G+  + D  +  +L
Sbjct: 220 DRQVTEAFNLFSKMVGQGISPDIFTYTSL 248


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 205/421 (48%), Gaps = 5/421 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ + ++GR+++    + +   +G      T N  V   C+ G V +A +V D M 
Sbjct: 270 VNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLML 329

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y  ++    + G + EA   ++ M+DRG + D  T   LI A   +    
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQN--- 386

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++A +L  E+  KG  P+VYT  +LI+ LCK G      RLF ++ +S    P+  TY
Sbjct: 387 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTY 445

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   C   K+  A  LL  M+  G   +T TY ++I   CK    E A ++ D M  
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G + +   +N +IDGLCK  R+ +A EL+++  +  LQ + ITY  +L+ + KQ   K+
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M   G   D+  Y TLI   C+  + + + K  +     G+ PT + Y  +I 
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGIS 574
              R  N+  A+  F+ M ++G  PD +TY  +   LC+    + EA  F   M+ KG  
Sbjct: 626 SLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFM 685

Query: 575 P 575
           P
Sbjct: 686 P 686



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 218/449 (48%), Gaps = 4/449 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++   E  +LK   S+  EMT  G+     TLN ++   C    V  A  + +EM
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            + GV  D +++  ++  +   G +  A R  + M++ G      T+ +LI  +C  G  
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMG-- 281

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             ++ A   +++ +  G++P+  T+   + GLC+ G    A ++ + L+  + + P+V T
Sbjct: 282 -RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV-MDLMLQEGHDPDVFT 339

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+   K  +++ A+ ++ +M ++G LP+T T+ +LI         E A DL   + 
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G +P++Y +N +I+ LCK G       L ++        D++TY IL+       +  
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M   G       Y T+I A C++ +++E+E+ F +    G+  +  T+ ++I
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +   I  A +  ++M + G  P+NITY ++++  CKQ  + +A    E+M   G  
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
              VT  TL    CK G +  A+ +L  +
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGM 608



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 252/605 (41%), Gaps = 103/605 (17%)

Query: 80  RSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVC 139
           R +P R+    D D L        +A+L  ++    AL     A+    F     +Y   
Sbjct: 44  RPAPLRVYAISDQDRL--------LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEI 95

Query: 140 ATSLISNGNFE-----------RAHEVMQCMVSSFAE----IGRLKEGFSMVIEMTNN-- 182
              L + G F+             H+V   +V SF E    + R  +   +V+   +N  
Sbjct: 96  VQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDT 155

Query: 183 -GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
            G+   T   N ++ +  E   ++  E V++EM  RG+  D                   
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDV------------------ 197

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
                             TL  LI A C       ++ A  +LEEM   G  P+  T T 
Sbjct: 198 -----------------VTLNTLIKALCRAH---QVRTAVLMLEEMSSHGVAPDETTFTT 237

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+ G  ++G  E A R+  K++ +    P   T   +I+GYCK  ++  A   +++    
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEA-GCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P+  TY + ++G C+ G+   A  +MDLM +EG  P+++ YN +I+ L K G + EA
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             ++ +   R    D  T+  L+     Q   ++AL L   +   GL+PD++ +  LI A
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMI---CGYLRDGN---------------- 522
            C+        + F+E  ++G  P + TY  +I   C   + GN                
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476

Query: 523 ----------------ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
                           I  A + F +M+  G +   +T+  LI GLCK  ++D+A +  E
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            M+ +G+ P  +T  ++   YCKQG+   A  ILE++     ++ + T  TLI  LC   
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596

Query: 624 RVGMA 628
           R  +A
Sbjct: 597 RTQVA 601



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 16/317 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     +G+L     ++ EM +NG P  T T N ++   C+   +E AEEVFD+M A+G
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A ++  ++   C+  R+ +A   +  M+  G   +N T   ++T +C +G   +IK
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG---NIK 564

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE M   G++ +V T+  LI+GLCK G T+ A +L L+ +R    +P    Y  +
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL-LRGMRIKGIRPTPKAYNPV 623

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN-FERAYDLMDLMGKEG 397
           I    +   +  A  L   M E G  P+  TY  +    C+ G   + A+D +  M  +G
Sbjct: 624 IQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG 683

Query: 398 CTPNIYAYNAIIDGLCKKGR---VQEAYEL-LKKAFQRELQADKITYTILLSEHLKQAET 453
             P   ++  + +GL   G    +  A EL ++KA  RE  A  I        +LK  + 
Sbjct: 684 FMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDASAI------RGYLKIRKY 737

Query: 454 KQALGLFCRMVKAGLNP 470
             AL  F R+++   NP
Sbjct: 738 YDALATFGRLLEIN-NP 753


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 232/491 (47%), Gaps = 9/491 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           F+ +      ++  FA   R +E  +++  E+    LP +  T N ++   C     E A
Sbjct: 55  FQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDV-ETWNVLITGYCLAREPEEA 113

Query: 208 EEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
             V  EM    GV     ++ L++   C+ G+V  A          G  +D  T T ++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                     I+ A  L+E++   G  P + T+  L++GLCK G  E+A  L  K+V  +
Sbjct: 174 WLAKNK---KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-DN 229

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V TYT++I G  KE++   A  L + M  +GL+ +T  YT+LI G  + G   +A
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +   M  +GC P++   + +IDGLCK GR+  A  + K    R L  +++ Y+ L+  
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +   AL +  +M KA   PD   Y  LI   C+   ++ +  FF E + AG  P 
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY  ++ G+ + GN  +A   F  M+   C+P+ +TYG LISGLCK+ +L +A  +++
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQ 469

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI--RTVNTLIRKLCSEKR 624
            M  +G  P      +L    CK G      ++ + +++      +T   LI  LC   R
Sbjct: 470 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANR 529

Query: 625 VGMAALFFHKL 635
           V  A   F+ +
Sbjct: 530 VDEAVSLFNAI 540



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 8/431 (1%)

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-G 291
           + R  R  EA   L   L    + D  T  +LIT +C        ++AF ++ EM    G
Sbjct: 69  FARTKRHREAGNLLKNELATTFLPDVETWNVLITGYC---LAREPEEAFAVIREMEEDYG 125

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P++ TH +++ GLCK G    A   F +   ++    ++HTYTA++    K +K+  A
Sbjct: 126 VAPSLKTHNLVLHGLCKSGKVLAAMDHF-ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L+E++   G  P   TY +L+ G CK+G  E A DL+  +   GCTP++  Y ++IDG
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L K+ R  EAY+L K+   R L  D + YT L+   L+  +  QA  ++  M   G  PD
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +   +T+I   C+  ++  + + F+     GL P +  Y+++I G  +   +  A++   
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M +  C PD ITY  LI GLCK   ++ A  F++ M+  G  P   T   L   +CK G
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
           ++  A  + + +        + T  TLI  LC  +++  A+L+F  +  +    D    +
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYS 484

Query: 649 ALKNACYESNK 659
           +L +   +S K
Sbjct: 485 SLVDGLCKSGK 495



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
           T NG  +   T   +V    +   ++ A  + +++ A G     ++Y  ++   C+MGR+
Sbjct: 157 TTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRL 216

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            EA   L  ++D G   D  T T LI      G      +A++L +EM  +G   +   +
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGL---GKEKRSFEAYKLFKEMALRGLVLDTVCY 273

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T LI GL + G   +A  ++ K + S    P+V T + MI G CK  ++  A  + + M+
Sbjct: 274 TALIRGLLQAGKIPQASSVY-KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +GL PN   Y++LI+G CK    + A +++  M K  CTP+   YN +IDGLCK G V+
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A     +  +   + D  TY IL+S   K   T  A G+F  M  +  +P++  Y TLI
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           +  C+++++ ++  +FQ     G  P    Y+S++ G  + G +      F  M + G A
Sbjct: 453 SGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 512

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            ++ T   LI  LCK +++DEA   + ++  +G+
Sbjct: 513 -NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 39/295 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G++ +  S+   MT+ G      TL+ ++   C+ G +  A  +F  M ARG
Sbjct: 276 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 335

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  ++   C+  ++  A   L+ M       D  T  +LI   C  G    ++
Sbjct: 336 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG---DVE 392

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A    +EM+  G KP+VYT+ +L+ G CK G T+ A  +F  +  S +  PNV TY  +
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM-SSSHCSPNVVTYGTL 451

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLP--------------------------------- 365
           ISG CK  ++ +A +  + MKE+G  P                                 
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511

Query: 366 -NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            N+ T T LI+  CK    + A  L + + KEG  P+ YAYN+II  L K  +V 
Sbjct: 512 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVN 565



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 4/254 (1%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +++  NA++D   +  R +EA  LLK         D  T+ +L++ +    E ++A  + 
Sbjct: 58  SVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVI 117

Query: 461 CRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             M +  G+ P +  +  ++   C+  K+  +   F+   T G      TYT+++    +
Sbjct: 118 REMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAK 177

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +  I  AV   +++   GC P   TY AL++GLCK  +L+EA      ++  G +P  VT
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 580 RVTLAYEYCKQGDSATAMIILESLD-KKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLL 636
             +L     K+  S  A  + + +  + L + TV    LIR L    ++  A+  +  + 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 637 GKDQNVDRVSLAAL 650
            +    D V+L+ +
Sbjct: 298 SQGCVPDVVTLSTM 311



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 97/270 (35%), Gaps = 42/270 (15%)

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +RE+  D +   + + + LK A+    L       + G    +H    L+  F R K+ 
Sbjct: 19  LRREISTDAV---VKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRH 75

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGY------------------------------- 517
           +E+    +  +     P  ET+  +I GY                               
Sbjct: 76  REAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNL 135

Query: 518 -----LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
                 + G + +A+ +F+     GC  D  TY A++  L K  K+ +A    E +   G
Sbjct: 136 VLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANG 195

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAA 629
            +P   T   L    CK G    A+ +L  +        + T  +LI  L  EKR   A 
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 255

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNK 659
             F ++  +   +D V   AL     ++ K
Sbjct: 256 KLFKEMALRGLVLDTVCYTALIRGLLQAGK 285


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 217/423 (51%), Gaps = 7/423 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +M+  +CR  ++  A   +  ++  G   +  T + LI   C   
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC--- 267

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A EL++ MV  G KP++ T   L++GLC  G   +A  L  K+V     +PN 
Sbjct: 268 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNA 326

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +++  CK  +   A  LL +M+E+ +  +   Y+ +I G CK G+ + A++L + 
Sbjct: 327 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 386

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G T NI  YN +I G C  GR  +  +LL+   +R++  + +T+++L+   +K+ +
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  L   M+  G+ PD   YT+LI  FC++  + ++ +     ++ G  P   T+  
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   I   ++ F++M+  G   D +TY  LI G C+  KL+ A + ++ M+ + 
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
           + P  VT   L    C  G+S  A+ I E ++K   +L I   N +I  +C+  +V  A 
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 630 LFF 632
             F
Sbjct: 627 DLF 629



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 206/439 (46%), Gaps = 4/439 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   +V  M   G      T+N +V   C  G    A  + D+M   G   +A +Y
Sbjct: 270 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 329

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+   A   L  M +R   LD    +++I   C     GS+  AF L  E
Sbjct: 330 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK---HGSLDNAFNLFNE 386

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG   N+ T+ +LI G C  G  +   +L   +++     PNV T++ +I  + KE 
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEG 445

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  AE L + M  +G+ P+T TYTSLI G CK  + ++A  ++DLM  +GC PNI  +N
Sbjct: 446 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 505

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G CK  R+ +  EL +K   R + AD +TY  L+    +  +   A  LF  MV  
Sbjct: 506 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P+I  Y  L+   C   + +++ + F++   + +      Y  +I G      +  A
Sbjct: 566 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 625

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  +   G  P   TY  +I GLCK+  L EA   +  M   G +P   T   L   
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685

Query: 587 YCKQGDSATAMIILESLDK 605
           +   GD+  ++ ++E L +
Sbjct: 686 HLGDGDATKSVKLIEELKR 704



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 189/359 (52%), Gaps = 4/359 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G ++ A  +F+EM  +G+  +  +Y +++  +C  GR  +  + L  M+ R 
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              +  T ++LI +F  +G    +++A EL +EM+ +G  P+  T+T LIDG CK+   +
Sbjct: 427 INPNVVTFSVLIDSFVKEG---KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA ++ + L+ S    PN+ T+  +I+GYCK  +++    L  +M  +G++ +T TY +L
Sbjct: 484 KANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C++G    A +L   M      PNI  Y  ++DGLC  G  ++A E+ +K  + ++
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D   Y I++      ++   A  LFC +   G+ P +  Y  +I   C++  + E+E 
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            F++    G  P   TY  +I  +L DG+ + +VK  + + + G + D  T   +I  L
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 191/394 (48%), Gaps = 4/394 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V+     G+  E   ++ +M   G      T   V+ + C+ G    A E+  +M 
Sbjct: 294 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 353

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  DA  Y +++   C+ G +  A    + M  +G   +  T  +LI  FC+ G   
Sbjct: 354 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG--- 410

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                 +LL +M+++   PNV T +VLID   K+G   +A  L  +++      P+  TY
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITY 469

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T++I G+CKE  +++A  +++ M  +G  PN  T+  LI G+CK    +   +L   M  
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 529

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN +I G C+ G++  A EL ++   R++  + +TY ILL       E+++
Sbjct: 530 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 589

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +F ++ K+ +  DI  Y  +I   C   K+ ++   F      G+ P  +TY  MI 
Sbjct: 590 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           G  + G +S A   F++M + G APD  TY  LI
Sbjct: 650 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 215/473 (45%), Gaps = 13/473 (2%)

Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           AH +  +  M++ F    +L   FS + ++   G    T T + ++   C  G V  A E
Sbjct: 218 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 277

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           + D M   G   D  +   +V   C  G+  EA   +  M++ G   +  T   ++   C
Sbjct: 278 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 337

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G       A ELL +M  +  K +   ++++IDGLCK G  + AF LF ++       
Sbjct: 338 KSG---QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGIT 393

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            N+ TY  +I G+C   + +    LL  M ++ + PN  T++ LI    K G    A +L
Sbjct: 394 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 453

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P+   Y ++IDG CK+  + +A +++     +    +  T+ IL++ + K
Sbjct: 454 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 513

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                  L LF +M   G+  D   Y TLI  FC   K+  +++ FQE ++  + P   T
Sbjct: 514 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 573

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +G    A++ F+++ +     D   Y  +I G+C  SK+D+A   + S+ 
Sbjct: 574 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 633

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-----KLWIRTVNTLIR 617
            KG+ P   T   +    CK+G  + A ++   +++       W  T N LIR
Sbjct: 634 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW--TYNILIR 684



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 33/389 (8%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  KG   N+YT +++I+  C+      AF    K+++   Y+PN  T++ +I+G 
Sbjct: 208 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGL 266

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C E +++ A  L++RM E G  P+  T  +L+ G C  G    A  L+D M + GC PN 
Sbjct: 267 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 326

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++ +CK G+   A ELL+K  +R ++ D + Y+I++    K      A  LF  
Sbjct: 327 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 386

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+  +I  Y  LI  FC   +  +  K  ++ I   + P   T++ +I  ++++G 
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A +  + M   G APD ITY +LI G CK++ LD+A Q  + M+ KG  P       
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN------ 500

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
                                     IRT N LI   C   R+      F K+  +    
Sbjct: 501 --------------------------IRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534

Query: 643 DRVSLAALKNACYESNKYALFSDLSQRIA 671
           D V+   L     E  K  +  +L Q + 
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMV 563



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 141/350 (40%), Gaps = 40/350 (11%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  ++ S    P V  ++ + S   K ++ +    L ++M+ +G+  N  T + 
Sbjct: 168 DDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      A+  M  + K G  PN   ++ +I+GLC +GRV E            
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE------------ 274

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                                  AL L  RMV+ G  PD+    TL+   C   K  E+ 
Sbjct: 275 -----------------------ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               + +  G  P   TY  ++    + G  + A++  ++M +     D + Y  +I GL
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
           CK   LD A   +  M  KGI+   +T   L   +C  G       +L  + K+     +
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
            T + LI     E ++  A     +++ +    D ++  +L +  C E++
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +  +A +L +           I ++ L S   K  +    L L  +M   G+  +++  +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I  FCR +K+  +     + I  G  P   T++++I G   +G +S A++   RM ++
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD IT   L++GLC   K  EA    + M+  G  P  VT   +    CK G +A A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 597 MIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           M +L  +++   KL     + +I  LC    +  A   F+++
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/321 (19%), Positives = 123/321 (38%), Gaps = 48/321 (14%)

Query: 368 NTYTSLIYGHCKVGNFERAY-DLMDLMGKEGCT-PNIYAYNAIIDGLCKKGRVQEAYELL 425
           N +  L+  H K   F+R   D   ++ KEG     +     I+  + +K    E  E +
Sbjct: 66  NRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWI 125

Query: 426 KKA-------------FQRELQADK-ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           K+                R +  D+ ++Y   L   L   +   A+ LF  M+ +   P 
Sbjct: 126 KEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPT 185

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  ++ L +A  + K+        ++    G+     T + MI  + R   +  A     
Sbjct: 186 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 245

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           ++ ++G  P+ IT+  LI+GLC + ++ EA +  + M+  G  P  +T            
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT------------ 293

Query: 592 DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
                               +NTL+  LC   +   A L   K++      + V+   + 
Sbjct: 294 --------------------INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 333

Query: 652 NACYESNKYALFSDLSQRIAE 672
           N   +S + AL  +L +++ E
Sbjct: 334 NVMCKSGQTALAMELLRKMEE 354



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 23/171 (13%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y +    L  NG  E+A E+ + +  S  E                    L     N ++
Sbjct: 574 YKILLDGLCDNGESEKALEIFEKIEKSKME--------------------LDIGIYNIII 613

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C    V+ A ++F  +  +GV     +Y +M+   C+ G ++EA+     M + G  
Sbjct: 614 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 673

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
            D  T  +LI A       G   ++ +L+EE+ R G+  +  T  ++ID L
Sbjct: 674 PDGWTYNILIRAHLGD---GDATKSVKLIEELKRCGFSVDASTIKMVIDML 721


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 219/455 (48%), Gaps = 26/455 (5%)

Query: 192 NRVVGIACELGLV------EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
           N ++G  C  G +      E AE+ ++EM + G   +  +        C  G+  +A + 
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           +  M+  G + D +T + +I   C+      ++ AF L +EM   G  P+VYT+T+LID 
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNAS---RVENAFFLFKEMKGTGVVPDVYTYTILIDC 533

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             K G  ++A     ++VR D  +P V TYT +I  Y K +K++ A  L E M  +G  P
Sbjct: 534 FSKAGIIKQAHNWLDEMVR-DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP----------------NIYAYNAII 409
           N  TYT+LI G+CK GN E+A  +   M  +   P                N+  Y A++
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DGLCK  +V++A +LL+  F    + + I Y  L+    K A+  +A  +F +MV+ G N
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYN 712

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+++ Y++LI    + K++    K   + +     P    YT MI G  +      A K 
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M + GC P+ +TY A+I G  K  K+D+  + +  M  KG +P  VT   L    C 
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
            G    A  +LE + +  W + V++  + +   KR
Sbjct: 833 TGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 867



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 187/401 (46%), Gaps = 25/401 (6%)

Query: 189 STLNRVVGIA-----CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           + LN+V  ++     C  G  E A +V  EM   G   D S+Y  ++   C   RV  A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                M   G + D  T T+LI  F   G    IKQA   L+EMVR G +P V T+T LI
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGI---IKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               K      A  LF +L+ +    PNV TYTA+I GYCK   + +A  +  RM+    
Sbjct: 567 HAYLKAKKVSVANELF-ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 364 LPNTN----------------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +P+ +                TY +L+ G CK    + A DL++ M  +GC PN   Y+A
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDG CK  ++ EA E+  K  +R    +  TY+ L+    K       L +  +M++  
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  YT +I    +  K  E+ K        G  P   TYT+MI G+ + G +   +
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           + F+ M   GCAP+ +TY  LI+  C    LDEA    E M
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 207/467 (44%), Gaps = 55/467 (11%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           V SFA      G+ ++ + ++ EM  NG    TST + V+G  C    VE A  +F EM 
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  D  +Y +++  + + G + +A  WL  M+  G      T T LI A+       
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA---K 573

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA---------------FRLFL 320
            +  A EL E M+ KG  PNV T+T LIDG CK G  EKA                 ++ 
Sbjct: 574 KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYF 633

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           K+  +   KPNV TY A++ G CK  K+  A  LLE M   G  PNT  Y +LI G CK 
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              + A ++   M + G  PN+Y Y+++ID L K  R+    ++L K  +     + + Y
Sbjct: 694 AKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K A+T +A  L   M + G  P++  YT +I  F +  K+ +  + F+E  +
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI------------------------ 536
            G  P   TYT +I      G++  A    + M Q                         
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSL 873

Query: 537 ---------GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
                    G AP  + Y  LI    K  +L+ A + ++ +I   +S
Sbjct: 874 GLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 228/527 (43%), Gaps = 99/527 (18%)

Query: 140 ATSLISNGNFERAHEVMQCMV--------SSFAEI-------GRLKEGFSMVIEMTNNGL 184
           A  L   G FE+A++V+  M+        S+++E+        R++  F +  EM   G+
Sbjct: 461 ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++    + G+++ A    DEM   G      +Y  ++ AY +  +V+ A+ 
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKG-----------FRGS----------------- 276
               M+ +G   +  T T LI  +C  G            RG                  
Sbjct: 581 LFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVA 640

Query: 277 --------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                               +K A +LLE M   G +PN   +  LIDG CK    ++A 
Sbjct: 641 EKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQ 700

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +F K+V    Y PNV+TY+++I    K+++++    +L +M E    PN   YT +I G
Sbjct: 701 EVFHKMVER-GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
             KV   + AY LM +M ++GC PN+  Y A+IDG  K G+V +  EL ++   +    +
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 437 KITYTILLSE-----HLKQA-----ETKQ-----------------------ALGLFCRM 463
            +TYT+L++      HL +A     E KQ                       +LGL   +
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEV 879

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT--KETYTSMICGYLRDG 521
            K G  P I  Y  LI  F +  +++ + +  +E I+A +  T  K  YTS+I  +    
Sbjct: 880 EKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYAS 939

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            I  A + F  M + G  PD  T+  L+ GL +  + +EA Q  +S+
Sbjct: 940 KIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 195/439 (44%), Gaps = 35/439 (7%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +  ++G+ +E  S++ +   + +P  T   N+++   CE    E A +  + M +     
Sbjct: 285 ALCKVGKWREALSLIEK--EDFVP-NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +  +Y++++       ++    R LS M+  G          L+ A+C          A+
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS---DDFSYAY 398

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------WTEKAFRLFLKLVRSDNYKPNV 332
           +LL++M +   KP    + +LI  +C  G           EKA+   L      N K NV
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN-KVNV 457

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            ++   + G+ K EK   A  ++  M   G +P+T+TY+ +I   C     E A+ L   
Sbjct: 458 VSFARCLCGFGKFEK---AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P++Y Y  +ID   K G +++A+  L +  +   +   +TYT L+  +LK  +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES----------------EKFFQ 496
              A  LF  M+  G  P++  YT LI  +C+   ++++                + +F+
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                   P   TY +++ G  +   +  A    + M   GC P+ I Y ALI G CK +
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 557 KLDEACQFYESMIGKGISP 575
           KLDEA + +  M+ +G +P
Sbjct: 695 KLDEAQEVFHKMVERGYNP 713



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 158/406 (38%), Gaps = 52/406 (12%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE-EMVRKGW 292
           CR G    A   L  + D G      T   L+  F     R       +L+  EM   G 
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVF----LRADKLDTAQLVHREMSELGL 272

Query: 293 KPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             + +T       LCK G W E      L L+  +++ PN   Y  MISG C+      A
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREA-----LSLIEKEDFVPNTILYNKMISGLCEASFFEEA 327

Query: 352 EMLLERMKEQGLLPNTNTY-----------------------------------TSLIYG 376
              L RM+    +PN  TY                                    SL++ 
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE--AYELLKKAFQRELQ 434
           +CK  +F  AY L+  M K  C P    YN +I  +C  G +     +EL +KA+   L 
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLS 447

Query: 435 ADKITYTILLSEHLK----QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           A  +   + +    +      + ++A  +   M+  G  PD   Y+ +I   C   +++ 
Sbjct: 448 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 507

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   F+E    G+ P   TYT +I  + + G I  A  +   M + GC P  +TY  LI 
Sbjct: 508 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIH 567

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              K  K+  A + +E MI KG  P  +T   L   YCK G+   A
Sbjct: 568 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 15/353 (4%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P VY    L+D + ++G  ++    FL+ +R D+ +        +I   C+    N A  
Sbjct: 171 PAVYI--ALLD-VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALE 227

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            L R+K+ G  P   TY +L+    +    + A  +   M + G + + +        LC
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G+ +EA  L++K    +   + I Y  ++S   + +  ++A+    RM      P++ 
Sbjct: 288 KVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  L+     +K++   ++     I  G +P+   + S++  Y +  + S A K  ++M
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQF------YESMIGKGISPCEVTRVTLAYEY 587
            +  C P  + Y  LI  +C   +L     F      Y  M+  G    +V  V+ A   
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLG 637
           C  G    A  ++  +    ++   +T   +I  LC+  RV  A   F ++ G
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 39/315 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F +  +L E   +  +M   G      T + ++    +   ++   +V  +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+    ++ +  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF---GKA 798

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  EL  EM  KG  PN  T+TVLI+  C  G  ++A+ L L+ ++   +  +V +
Sbjct: 799 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL-LEEMKQTYWPKHVSS 857

Query: 335 YTAMISGYCKE------------------------------EKMNRAEMLLERMKE---- 360
           Y  +I GY +E                               K  R E+ LE  KE    
Sbjct: 858 YCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISA 917

Query: 361 -QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              +    N YTSLIY        + A++L   M ++G  P++  +  ++ GL +  R +
Sbjct: 918 SMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWE 977

Query: 420 EAYELLKKAFQRELQ 434
           EA +L     Q ++ 
Sbjct: 978 EALQLSDSLCQMDIN 992


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 242/511 (47%), Gaps = 42/511 (8%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G VE AEE F E   RGV  DA +Y +++ A C+          L  M +RG +   AT 
Sbjct: 274 GRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATF 333

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T +I A   +   G++ +A  L EEM+  G   N+   T L+ G C +G  + A  LF K
Sbjct: 334 TSVIVACVAQ---GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK 390

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH---- 377
           +   D   PN  TY+ +I G C    + +A  L  +MK  G+ P+     SL+ G+    
Sbjct: 391 ITE-DGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP 449

Query: 378 ------------------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
                                         CK G  + A  L+D M  +G  PN+ +YN 
Sbjct: 450 LWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 509

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I G C+KG +  A  +      R+L+ + +TY+IL+  + K+ ++++AL LF +M+   
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P    + T+I   C+  +M E+    +  +  G  P+  TY S++ G++++GNI SA+
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 629

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             ++ M + G +P+ +TY +LI+G CK +++D A +  + M  KG+         L   +
Sbjct: 630 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689

Query: 588 CKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           CK+ D  +A  +  E L+  L    +  N++I        +  A +++ K++      D 
Sbjct: 690 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 749

Query: 645 VSLAALKNACYESNKYALFSDL-SQRIAEGI 674
            +   L +   +  +    SDL  + +++GI
Sbjct: 750 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 249/510 (48%), Gaps = 12/510 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +   G L    ++  ++T +GL     T + ++   C  G +E A E++ +M
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +   ++  Y +     EA +     +D G + +  T  ++++  C KG  
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLC-KG-- 482

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A  LL+ MV +G  PNV ++  +I G C+KG  + A  +F  ++  D  KPNV T
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD-LKPNVVT 541

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I G  K+    +A  L ++M    + P   T+ ++I G CKVG    A D +    
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 601

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +EG  P+   YN+I+DG  K+G +  A  + ++  +  +  + +TYT L++   K     
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 661

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL     M + GL  D+ AY+ LI  FC+++ M+ ++  F E +  GL P +  Y SMI
Sbjct: 662 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 721

Query: 515 CGYLRDGNISSAVKYFQRM--NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            G+    N+ +A+ ++++M  ++I C  D  TY  LI GL K+ +L  A   Y  M+ KG
Sbjct: 722 SGFRDLNNMEAALVWYKKMINDRIPC--DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG 779

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAA 629
           I P  +T   L    C +G    A  ILE +D+K    +V   NTLI     E  +  A 
Sbjct: 780 IVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 839

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNK 659
               ++L +    D V+   L N  ++ ++
Sbjct: 840 TLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 222/514 (43%), Gaps = 51/514 (9%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCAR--GVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           LNR V    +   V + + + +  CA+      D   +  ++ AY R  R+  A    +A
Sbjct: 158 LNRYVSGDSDPSPVVFVDHLIN--CAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 215

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M+ +  I     + +L+TA   +   G ++   +L  +MV +G   + +T  V++    K
Sbjct: 216 MICQDVIPWVPYMNILLTALVRRNMIGELR---DLYNKMVLRGIYGDHFTVHVMVRACLK 272

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G  E+A   F +  +    K +   Y+ +I   CK+   N    LLE MKE+G +P+  
Sbjct: 273 EGRVEEAEEYF-RETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331

Query: 369 TYTSLIY-----------------------------------GHCKVGNFERAYDLMDLM 393
           T+TS+I                                    G+C  GN + A +L + +
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  PN   Y+ +I+G C  G +++A EL  +     +         LL  +LK    
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++A  LF   V  G+  +I  Y  +++  C+  KM E+       +  G+ P   +Y  M
Sbjct: 452 EEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G+ R GN+  A   F  M      P+ +TY  LI G  K+   ++A   ++ M+   I
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAAL 630
           +P + T  T+    CK G  + A   L++  ++ +I    T N+++     E  +  A  
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 631 FFHKL--LGKDQNVDRVSLAALKNACYESNKYAL 662
            + ++   G   NV  V+  +L N   +SN+  L
Sbjct: 631 VYREMCEFGVSPNV--VTYTSLINGFCKSNRIDL 662



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 3/264 (1%)

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  + G      V     L+  A + + + D   +  LL+ +++    + A+  F  M+ 
Sbjct: 159 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 218

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             + P +     L+ A  R+  + E    + + +  G++    T   M+   L++G +  
Sbjct: 219 QDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 278

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +YF+   + G   D   Y  +I  +CK+   +   +  E M  +G  P E T  ++  
Sbjct: 279 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 338

Query: 586 EYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
               QG+   A+ + E +    K + +    +L++  C++  +  A   F+K+       
Sbjct: 339 ACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFP 398

Query: 643 DRVSLAALKNACYESNKYALFSDL 666
           ++V+ + L   C  S      S+L
Sbjct: 399 NKVTYSVLIEGCCNSGNIEKASEL 422


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 219/455 (48%), Gaps = 26/455 (5%)

Query: 192 NRVVGIACELGLV------EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
           N ++G  C  G +      E AE+ ++EM + G   +  +        C  G+  +A + 
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           +  M+  G + D +T + +I   C+      ++ AF L +EM   G  P+VYT+T+LID 
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNAS---RVENAFFLFKEMKGTGVVPDVYTYTILIDC 533

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             K G  ++A     ++VR D  +P V TYT +I  Y K +K++ A  L E M  +G  P
Sbjct: 534 FSKAGIIKQAHNWLDEMVR-DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP----------------NIYAYNAII 409
           N  TYT+LI G+CK GN E+A  +   M  +   P                N+  Y A++
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DGLCK  +V++A +LL+  F    + + I Y  L+    K A+  +A  +F +MV+ G N
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYN 712

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+++ Y++LI    + K++    K   + +     P    YT MI G  +      A K 
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M + GC P+ +TY A+I G  K  K+D+  + +  M  KG +P  VT   L    C 
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
            G    A  +LE + +  W + V++  + +   KR
Sbjct: 833 TGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 867



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 186/401 (46%), Gaps = 25/401 (6%)

Query: 189 STLNRVVGIA-----CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           + LN+V  ++     C  G  E A +V  EM   G   D S+Y  ++   C   RV  A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                M   G + D  T T+LI  F   G    IKQA   L+EMVR G +P V T+T LI
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGI---IKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               K      A  LF +L+ +    PNV TYTA+I GYCK   + +A  +  RM+    
Sbjct: 567 HAYLKAKKVSVANELF-ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 364 LPNTN----------------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +P+ +                TY +L+ G CK    + A DL++ M  +GC PN   Y+A
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDG CK  ++ EA E+  K  +     +  TY+ L+    K       L +  +M++  
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P+I  YT +I    +  K  E+ K        G  P   TYT+MI G+ + G +   +
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           + F+ M   GCAP+ +TY  LI+  C    LDEA    E M
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 208/467 (44%), Gaps = 55/467 (11%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           V SFA      G+ ++ + ++ EM  NG    TST + V+G  C    VE A  +F EM 
Sbjct: 457 VVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  D  +Y +++  + + G + +A  WL  M+  G      T T LI A+       
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA---K 573

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR---------------LFL 320
            +  A EL E M+ KG  PNV T+T LIDG CK G  EKA +               ++ 
Sbjct: 574 KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYF 633

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           K+  +   KPNV TY A++ G CK  K+  A  LLE M   G  PNT  Y +LI G CK 
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              + A ++   M + G  PN+Y Y+++ID L K  R+    ++L K  +     + + Y
Sbjct: 694 AKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K A+T +A  L   M + G  P++  YT +I  F +  K+ +  + F+E  +
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI------------------------ 536
            G  P   TYT +I      G++  A    + M Q                         
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSL 873

Query: 537 ---------GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
                    G AP  + Y  LI    K  +L+ A + ++ +I   +S
Sbjct: 874 GLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 227/527 (43%), Gaps = 99/527 (18%)

Query: 140 ATSLISNGNFERAHEVMQCMV--------SSFAEI-------GRLKEGFSMVIEMTNNGL 184
           A  L   G FE+A++V+  M+        S+++E+        R++  F +  EM   G+
Sbjct: 461 ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++    + G+++ A    DEM   G      +Y  ++ AY +  +V+ A+ 
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKG-----------FRGS----------------- 276
               M+ +G   +  T T LI  +C  G            RG                  
Sbjct: 581 LFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVA 640

Query: 277 --------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                               +K A +LLE M   G +PN   +  LIDG CK    ++A 
Sbjct: 641 EKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQ 700

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +F K+V    Y PNV+TY+++I    K+++++    +L +M E    PN   YT +I G
Sbjct: 701 EVFHKMVEH-GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
             KV   + AY LM +M ++GC PN+  Y A+IDG  K G+V +  EL ++   +    +
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 437 KITYTILLSE-----HLKQA-----ETKQ-----------------------ALGLFCRM 463
            +TYT+L++      HL +A     E KQ                       +LGL   +
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEV 879

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA--GLFPTKETYTSMICGYLRDG 521
            K G  P I  Y  LI  F +  +++ + +  +E I+A   +   K  YTS+I  +    
Sbjct: 880 EKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYAS 939

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            I  A + F  M + G  PD  T+  L+ GL +  + +EA Q  +S+
Sbjct: 940 KIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 194/439 (44%), Gaps = 35/439 (7%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +  ++G+ +E  S++ +   + +P  T   N+++   CE    E A +  + M +     
Sbjct: 285 ALCKVGKWREALSLIEK--EDFVP-NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +  +Y++++       ++    R LS M+  G          L+ A+C          A+
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS---DDFSYAY 398

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------WTEKAFRLFLKLVRSDNYKPNV 332
           +LL++M +   KP    + +LI  +C  G           EKA+   L      N K NV
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN-KVNV 457

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            ++   + G+ K EK   A  ++  M   G +P+T+TY+ +I   C     E A+ L   
Sbjct: 458 VSFARCLCGFGKFEK---AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P++Y Y  +ID   K G +++A+  L +  +   +   +TYT L+  +LK  +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES----------------EKFFQ 496
              A  LF  M+  G  P++  YT LI  +C+   ++++                + +F+
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                   P   TY +++ G  +   +  A    + M   GC P+ I Y ALI G CK +
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 557 KLDEACQFYESMIGKGISP 575
           KLDEA + +  M+  G +P
Sbjct: 695 KLDEAQEVFHKMVEHGYNP 713



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 158/406 (38%), Gaps = 52/406 (12%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE-EMVRKGW 292
           CR G    A   L  + D G      T   L+  F     R       +L+  EM   G 
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVF----LRADKLDTAQLVHREMSELGL 272

Query: 293 KPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             + +T       LCK G W E      L L+  +++ PN   Y  MISG C+      A
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREA-----LSLIEKEDFVPNTILYNKMISGLCEASFFEEA 327

Query: 352 EMLLERMKEQGLLPNTNTY-----------------------------------TSLIYG 376
              L RM+    +PN  TY                                    SL++ 
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE--AYELLKKAFQRELQ 434
           +CK  +F  AY L+  M K  C P    YN +I  +C  G +     +EL +KA+   L 
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLS 447

Query: 435 ADKITYTILLSEHLK----QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           A  +   + +    +      + ++A  +   M+  G  PD   Y+ +I   C   +++ 
Sbjct: 448 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 507

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   F+E    G+ P   TYT +I  + + G I  A  +   M + GC P  +TY  LI 
Sbjct: 508 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIH 567

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              K  K+  A + +E MI KG  P  +T   L   YCK G+   A
Sbjct: 568 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 15/353 (4%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P VY    L+D + ++G  ++    FL+ +R D+ +        +I   C+    N A  
Sbjct: 171 PAVYI--ALLD-VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALE 227

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            L R+K+ G  P   TY +L+    +    + A  +   M + G + + +        LC
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G+ +EA  L++K    +   + I Y  ++S   + +  ++A+    RM      P++ 
Sbjct: 288 KVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  L+     +K++   ++     I  G +P+   + S++  Y +  + S A K  ++M
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQF------YESMIGKGISPCEVTRVTLAYEY 587
            +  C P  + Y  LI  +C   +L     F      Y  M+  G    +V  V+ A   
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLG 637
           C  G    A  ++  +    ++   +T   +I  LC+  RV  A   F ++ G
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 39/315 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F +  +L E   +  +M  +G      T + ++    +   ++   +V  +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+    ++ +  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF---GKA 798

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  EL  EM  KG  PN  T+TVLI+  C  G  ++A+ L L+ ++   +  +V +
Sbjct: 799 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL-LEEMKQTYWPKHVSS 857

Query: 335 YTAMISGYCKE------------------------------EKMNRAEMLLERMKE---- 360
           Y  +I GY +E                               K  R E+ LE  KE    
Sbjct: 858 YCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISA 917

Query: 361 -QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              +    N YTSLIY          A++L   M ++G  P++  +  ++ GL +  R +
Sbjct: 918 SMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWE 977

Query: 420 EAYELLKKAFQRELQ 434
           EA +L     Q ++ 
Sbjct: 978 EALQLSDSLCQMDIN 992


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 227/460 (49%), Gaps = 6/460 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F+ + R+   FS++ ++   GL     T   ++   C++G    A E+FD+M 
Sbjct: 136 LSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ARG   D  +Y  ++   C++G    A   L  M + G   +  T + +I +   K  R 
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH-RKDRR- 253

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + +A ++   M  KG  P+++T+  LI GLC    W E +    L  +RS N  P++ T
Sbjct: 254 -VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS--ALLNEMRSLNIMPDIVT 310

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++   CKE K++ A+ +L+ M E G+ P+  TY+SL+YG+        A  L D M 
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P++++YN +I+G CK  R+ EA +L  +   + L  + ++Y  L+    +    +
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M   G  P++  Y+ L+  FC+Q    ++ + F+   +    P    Y  +I
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + GN+  A K F  +   G  P+   Y  +I+GLCK+  LDEA + + +M   G  
Sbjct: 491 DAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 550

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           P E++   +   +    D + A+ ++  +  K +I  V T
Sbjct: 551 PDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 218/445 (48%), Gaps = 8/445 (1%)

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           AC    ++ A   F+ M  R        +  ++ A  +MG+  +    L+  ++   +  
Sbjct: 72  ACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSP 131

Query: 258 NA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           N  TL++LI  F        +  AF +L ++++ G +P + T T LI+ LCK G   +A 
Sbjct: 132 NIYTLSILINCF---SHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            LF  +V +   +P+V+TYT +I+G CK  +   A  LL++M+E G  PN  TY+++I  
Sbjct: 189 ELFDDMV-ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           H K      A D+   M  +G +P+I+ YN++I GLC   + +EA  LL +     +  D
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +T+ +L+    K+ +  +A G+   M + G+ PD+  Y++L+  +  + ++ E+ K F 
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             IT G  P   +Y  +I GY +   I  A + F  M   G  P+N++Y  LI GLC+  
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLG 427

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVN 613
            L EA   +++M   G  P   T   L   +CKQG    A  +   ++S   K  +   N
Sbjct: 428 SLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYN 487

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGK 638
            LI  +C    +  A   F +L  K
Sbjct: 488 ILIDAMCKSGNLRDARKLFSELFVK 512


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%), Gaps = 35/473 (7%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEM--------TNNGLPLITSTLNRV 194
           L+ +G F++AH+V   M      +G + + ++  I +         ++ L L    LN +
Sbjct: 121 LVESGYFKQAHKVFLRM----KNVGIVPDVYTFTIRIKSFCRTKRPHSALRL----LNNM 172

Query: 195 VGIACELGLVEY---------------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
           V   C+L  V Y               A E+F++M   G+  D S++  ++   C+ G V
Sbjct: 173 VSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEV 232

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            E++R L+ +L +G   +  T  + I   C KG    +  A  +L+ ++R+G  P+V T+
Sbjct: 233 QESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGM---LSGAMSMLDSVIREGLTPDVVTY 289

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             LI GLCK     +A +   KLV     +P+  TY  +I GYCK   +  AE +L+   
Sbjct: 290 NTLICGLCKNSNVVEAEKYLHKLVNG-GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G +P+  TY SLI G C+    +RA  L +    +G  P +  YN +I GLC++G + 
Sbjct: 349 CKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLIL 408

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A +++ +  +    +D  TY ++++   K      A  L    +  G  PD+  + TLI
Sbjct: 409 QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +C+Q KM+ + +   +  + G+ P   TY S++ G  +       ++ F+ M + GC 
Sbjct: 469 DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCV 528

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           P+ ITY  L   LCK  K++EA    + ++ KGI+P  V+  T+   +   GD
Sbjct: 529 PNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 143/585 (24%), Positives = 259/585 (44%), Gaps = 54/585 (9%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ----- 157
           V A L  +   + AL  F        F+H +  Y      L  +GNF     V+      
Sbjct: 10  VAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD 69

Query: 158 -----------CMVSSFAEIGRLKEGFSMVIEMT-NNGLPLITSTLNRVVGIACELGLVE 205
                        + S+   G+++E   +   M   N  P + S  N ++ I  E G  +
Sbjct: 70  IDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLS-YNAIMNILVESGYFK 128

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A +VF  M   G+  D  ++ + + ++CR  R   A R L+ M+ +G  L+      ++
Sbjct: 129 QAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVV 188

Query: 266 TAFCDKGFR--------------------------------GSIKQAFELLEEMVRKGWK 293
             F ++ +R                                G ++++  LL ++++KG  
Sbjct: 189 AGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMC 248

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            N++T  + I GLC+KG    A  +   ++R +   P+V TY  +I G CK   +  AE 
Sbjct: 249 SNLFTFNIFIQGLCRKGMLSGAMSMLDSVIR-EGLTPDVVTYNTLICGLCKNSNVVEAEK 307

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            L ++   GL P+  TY +LI G+CK+G  + A  ++     +G  P+ + Y ++I+GLC
Sbjct: 308 YLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLC 367

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           +   +  A  L   A  + L+   I Y +L+    ++    QAL +   M + G + DI 
Sbjct: 368 QNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIW 427

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  +I   C+   + ++     +AI  G  P   T+ ++I GY +   + + ++   +M
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKM 487

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  PD ITY ++++GL K  K ++  + +E+M+ KG  P ++T   L    CK G  
Sbjct: 488 WSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKV 547

Query: 594 ATAM-IILESLDKKLWIRTVN--TLIRKLCSEKRVGMAALFFHKL 635
             A+ ++ E L+K +   TV+  T+I    +   +  A   F ++
Sbjct: 548 NEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 9/430 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           ++ N GL     T N ++   C++G+++ AE++      +G   D  +Y  ++   C+  
Sbjct: 311 KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQND 370

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            +  A    +A L +G         +LI   C +G    I QA +++ EM   G   +++
Sbjct: 371 EIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGL---ILQALQMMNEMSENGCSSDIW 427

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+ ++I+GLCK G    A  L    + +  Y P+V T+  +I GYCK+ KM     +L +
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAI-AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M   G+ P+  TY S++ G  K    E   +  + M ++GC PN   YN + + LCK G+
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYT 476
           V EA +L+ +   + +  D +++  ++S      + K A  LF RM +   ++     Y 
Sbjct: 547 VNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYN 606

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I AF  +  +   EK F E    G  P   TY  MI G+   GN  S  K+   M + 
Sbjct: 607 IMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P   T+G +I+ LC Q ++ EA      M+  GI P  V  ++ A     +   A  
Sbjct: 667 GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEA----DKKVVAAP 722

Query: 597 MIILESLDKK 606
            I++E L K+
Sbjct: 723 KIVVEDLLKR 732



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 228/479 (47%), Gaps = 8/479 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G ++E   ++ ++   G+     T N  +   C  G++  A  + D +   G
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREG 281

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C+   V EA+++L  +++ G   D  T   LI  +C  G    ++
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGM---LQ 338

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++L+  + KG+ P+ +T+  LI+GLC+    ++A  LF         KP V  Y  +
Sbjct: 339 NAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF-NAALGKGLKPTVILYNML 397

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+E  + +A  ++  M E G   +  TY  +I G CK+G    A +LM+    +G 
Sbjct: 398 IKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY 457

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ +N +IDG CK+ +++   ++L K +   +  D ITY  +L+   K  + +  + 
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  MV+ G  P+   Y  L  + C+  K+ E+     E +  G+ P   ++ ++I G+ 
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577

Query: 519 RDGNISSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +G++  A + F+RM  Q   +    TY  +I+   ++  L    + +  M   G +P  
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFH 633
            T   +   +C  G++ +    L  + +K +I ++ T   +I  LC + RV  A    H
Sbjct: 638 YTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 242/511 (47%), Gaps = 42/511 (8%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G VE AEE F E   RGV  DA +Y +++ A C+          L  M +RG +   AT 
Sbjct: 234 GRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATF 293

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T +I A   +   G++ +A  L EEM+  G   N+   T L+ G C +G  + A  LF K
Sbjct: 294 TSVIVACVAQ---GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK 350

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH---- 377
           +   D   PN  TY+ +I G C    + +A  L  +MK  G+ P+     SL+ G+    
Sbjct: 351 ITE-DGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP 409

Query: 378 ------------------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
                                         CK G  + A  L+D M  +G  PN+ +YN 
Sbjct: 410 LWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I G C+KG +  A  +      R+L+ + +TY+IL+  + K+ ++++AL LF +M+   
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P    + T+I   C+  +M E+    +  +  G  P+  TY S++ G++++GNI SA+
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 589

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             ++ M + G +P+ +TY +LI+G CK +++D A +  + M  KG+         L   +
Sbjct: 590 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649

Query: 588 CKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           CK+ D  +A  +  E L+  L    +  N++I        +  A +++ K++      D 
Sbjct: 650 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 709

Query: 645 VSLAALKNACYESNKYALFSDL-SQRIAEGI 674
            +   L +   +  +    SDL  + +++GI
Sbjct: 710 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 249/510 (48%), Gaps = 12/510 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +   G L    ++  ++T +GL     T + ++   C  G +E A E++ +M
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +   ++  Y +     EA +     +D G + +  T  ++++  C KG  
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLC-KG-- 442

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A  LL+ MV +G  PNV ++  +I G C+KG  + A  +F  ++  D  KPNV T
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD-LKPNVVT 501

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I G  K+    +A  L ++M    + P   T+ ++I G CKVG    A D +    
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 561

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +EG  P+   YN+I+DG  K+G +  A  + ++  +  +  + +TYT L++   K     
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 621

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL     M + GL  D+ AY+ LI  FC+++ M+ ++  F E +  GL P +  Y SMI
Sbjct: 622 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 681

Query: 515 CGYLRDGNISSAVKYFQRM--NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            G+    N+ +A+ ++++M  ++I C  D  TY  LI GL K+ +L  A   Y  M+ KG
Sbjct: 682 SGFRDLNNMEAALVWYKKMINDRIPC--DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG 739

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAA 629
           I P  +T   L    C +G    A  ILE +D+K    +V   NTLI     E  +  A 
Sbjct: 740 IVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 799

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNK 659
               ++L +    D V+   L N  ++ ++
Sbjct: 800 TLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 222/514 (43%), Gaps = 51/514 (9%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCAR--GVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           LNR V    +   V + + + +  CA+      D   +  ++ AY R  R+  A    +A
Sbjct: 118 LNRYVSGDSDPSPVVFVDHLIN--CAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 175

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M+ +  I     + +L+TA   +   G ++   +L  +MV +G   + +T  V++    K
Sbjct: 176 MICQDVIPWVPYMNILLTALVRRNMIGELR---DLYNKMVLRGIYGDHFTVHVMVRACLK 232

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G  E+A   F +  +    K +   Y+ +I   CK+   N    LLE MKE+G +P+  
Sbjct: 233 EGRVEEAEEYF-RETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291

Query: 369 TYTSLIY-----------------------------------GHCKVGNFERAYDLMDLM 393
           T+TS+I                                    G+C  GN + A +L + +
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  PN   Y+ +I+G C  G +++A EL  +     +         LL  +LK    
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++A  LF   V  G+  +I  Y  +++  C+  KM E+       +  G+ P   +Y  M
Sbjct: 412 EEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G+ R GN+  A   F  M      P+ +TY  LI G  K+   ++A   ++ M+   I
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAAL 630
           +P + T  T+    CK G  + A   L++  ++ +I    T N+++     E  +  A  
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 631 FFHKL--LGKDQNVDRVSLAALKNACYESNKYAL 662
            + ++   G   NV  V+  +L N   +SN+  L
Sbjct: 591 VYREMCEFGVSPNV--VTYTSLINGFCKSNRIDL 622



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 3/264 (1%)

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  + G      V     L+  A + + + D   +  LL+ +++    + A+  F  M+ 
Sbjct: 119 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 178

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             + P +     L+ A  R+  + E    + + +  G++    T   M+   L++G +  
Sbjct: 179 QDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 238

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +YF+   + G   D   Y  +I  +CK+   +   +  E M  +G  P E T  ++  
Sbjct: 239 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 298

Query: 586 EYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
               QG+   A+ + E +    K + +    +L++  C++  +  A   F+K+       
Sbjct: 299 ACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFP 358

Query: 643 DRVSLAALKNACYESNKYALFSDL 666
           ++V+ + L   C  S      S+L
Sbjct: 359 NKVTYSVLIEGCCNSGNIEKASEL 382


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 230/492 (46%), Gaps = 26/492 (5%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCARGVCADASSYKLMVVAYCR 235
           M +N  P ++S  + + G+A     +++  +VF   ++M   G+  D  +  +++   C 
Sbjct: 88  MYSNPTPPLSSFTHLLSGLA----KIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCN 143

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           + RV E    ++ +L RG I D  T T LI   C       I +A  L   M + G  PN
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC---MEHRISKAALLFTRMQKLGCTPN 200

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-----NYKPNVHTYTAMISGYCKEEKMNR 350
             T+  L+ GLC+ G    A +L  +++        N+KP V +Y+ +I   CK+ + + 
Sbjct: 201 AITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE 260

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L E MK QG+ P   +YTSL++        E A  L + M  +G  PN+  +N +ID
Sbjct: 261 ARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLID 312

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK+G+V EA +LL+   QR +  + +TY  L+       +   A  LF  M   G  P
Sbjct: 313 VLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEP 372

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  YT LI  +C+  K++E+ K +   +  G  P  +TY +++ G  + G +  A K F
Sbjct: 373 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 432

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M   G   D   YG  ++GLCK   L EA + +  +    I         L    CK 
Sbjct: 433 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 492

Query: 591 GDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           G   TA  + E L ++     + T N +I + C   +V  A + F K+       D+++ 
Sbjct: 493 GKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 552

Query: 648 AALKNACYESNK 659
           A L    +ES K
Sbjct: 553 ATLIRGFFESKK 564



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 213/484 (44%), Gaps = 72/484 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  A+I    + F +  +M  +G+     TLN ++   C +  V     V   +  RG
Sbjct: 102 LLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRG 161

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++   C   R+++A    + M   G   +  T   L+   C  G   +I 
Sbjct: 162 YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG---NIS 218

Query: 279 QAFELLEEMVRK------GWKPNVYTHTVLIDGLCK----------------KGWT---- 312
            A +L +EM+         +KP V +++++ID LCK                +G T    
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 313 -------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
                  E+A RLF ++V +   +PNV T+  +I   CKE K+  A+ LLE M ++G++P
Sbjct: 279 SYTSLMWEEAKRLFNEMV-NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  TY SLI G C VG+   A +L   M  +GC P++  Y  +I+G CK  +V+EA +L 
Sbjct: 338 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 397

Query: 426 KKAFQRELQADKITYTILLS---EHLKQAETKQALG------------------------ 458
               Q   + D  TY  LL+   +  K  + K+  G                        
Sbjct: 398 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 457

Query: 459 --------LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                   LF ++    +  DI  +  LI   C+  K++ + + F++     L P   TY
Sbjct: 458 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             MI  + R G +  A   FQ+M + GC PD ITY  LI G  +  KL++  +    M+ 
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577

Query: 571 KGIS 574
           + +S
Sbjct: 578 RDVS 581



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 39/304 (12%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E A+ +F+EM  +GV  +  ++ +++   C+ G+V EA   L  M+ RG + +  T   L
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I  FC     G +  A EL   M  KG +P+V  +TVLI+G CK    E+A +L+  +++
Sbjct: 346 IEGFC---LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 402

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY-------------- 370
               +P+V TY A+++G  +  K+  A+ L   MK  G+  +   Y              
Sbjct: 403 VGK-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 461

Query: 371 ---------------------TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
                                  LI G CK G  E A++L + + +E   P++  YN +I
Sbjct: 462 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
              C+ G+V +A  L +K  +     DKITY  L+    +  + ++ + L   MV+  ++
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581

Query: 470 PDIH 473
            D++
Sbjct: 582 LDVN 585



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 161/364 (44%), Gaps = 20/364 (5%)

Query: 307 CKKGWTE--KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           CK G     +AF+ F  L+   N  P + ++T ++SG  K +  ++   L  +M+  G+ 
Sbjct: 70  CKTGNITAIQAFQFF-HLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T   L+   C V        +M  + + G  P+I  Y  +I GLC + R+ +A  L
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA----GLN--PDIHAYTTL 478
             +  +     + ITY  L+    +      AL L   M+      G+N  P + +Y+ +
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I A C+ ++  E+   F+E    G+ PT  +YTS++           A + F  M   G 
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGV 300

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+ +T+  LI  LCK+ K+ EA    E MI +GI P  +T  +L   +C  GD  +A  
Sbjct: 301 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 360

Query: 599 ILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           +  S+  K     V     LI   C   +V  A   ++ +L   +  D  +  AL    +
Sbjct: 361 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 420

Query: 656 ESNK 659
           +  K
Sbjct: 421 QGGK 424



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 17/264 (6%)

Query: 372 SLIYGHCKVGNFE--RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           S+   +CK GN    +A+    LM     TP + ++  ++ GL K     + + L  +  
Sbjct: 64  SMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D  T  ILL+         + L +   +++ G  PDI  YTTLI   C + ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ------IGCAPDNI 543
           ++   F      G  P   TY +++ G  R GNIS A+K  Q M        I   P  I
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +Y  +I  LCK  + DEA   +E M  +G++P  ++  +L +E  K+       +  E +
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKR-------LFNEMV 296

Query: 604 DKKLW--IRTVNTLIRKLCSEKRV 625
           ++ +   + T N LI  LC E +V
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKV 320


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 154 EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +V  C  MV+++ + G+++     V EM   G  L   + N +V     LG +E A+ V 
Sbjct: 65  DVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVL 124

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCD 270
             M  +GV  +  +  L++  YC+  +V EA++ L  M  + G ++D      LI  +C 
Sbjct: 125 KFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCK 184

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G  G    A  + +EM++ G K N++    LI+G CK G   +  RL +  +R  + KP
Sbjct: 185 VGKMG---DAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLM-CMRKLDLKP 240

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           + ++Y  ++ GYC++   ++A  + ++M  +G+ P   TY +L+ G C+ G+++ A  L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            LM + G TPN   Y  ++DGL K G    A  L      R +      +  +++   K 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E   A   F RM + G  PD   Y TL   +C+   ++E+ K  ++     +FP+ E Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S+I G      IS  +     M+  G +P+ +TYGALI+G C Q +LD+A   Y  MIG
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 571 KGISP 575
           KG +P
Sbjct: 481 KGFAP 485



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 221/537 (41%), Gaps = 58/537 (10%)

Query: 133 MRLYIVCATSLIS----NGNFERAHEVMQCM---------------VSSFAEIGRLKEGF 173
           +++ +    SLI+    NG       ++ CM               V  +   G   + F
Sbjct: 203 LKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAF 262

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           ++  +M   G+     T N ++   C  G  + A  ++  M  RGV  +   Y  ++   
Sbjct: 263 NVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGL 322

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
            +MG  + A      +L RG          +I   C  G     K+ F+ +EE+   G K
Sbjct: 323 FKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEEL---GCK 379

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+  T+  L DG CK G  E+AF++  K+ + + + P++  Y ++I G    +K+++   
Sbjct: 380 PDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIF-PSIEMYNSLIVGLFTSKKISKLID 438

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL  M  +GL PN  TY +LI G C  G  ++A+     M  +G  PN+   + I+  L 
Sbjct: 439 LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLY 498

Query: 414 KKGRVQEAYELLKKAFQRELQAD-----------------------------------KI 438
           + GR+ EA  LL+K    +L  D                                    +
Sbjct: 499 RLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNV 558

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y I ++   K  +   A   F  +      PD   Y TLI  F     + E+     E 
Sbjct: 559 VYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEM 618

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  GL P   TY +++ G  + G +  A + F +++  G  P+ +TY  LI G CK    
Sbjct: 619 VNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSP 678

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
            EA      M+ +GISP  +T  +L   +CKQ D   AM +L  +      +T+ T 
Sbjct: 679 REALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATF 735



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 222/499 (44%), Gaps = 78/499 (15%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           +V   C+ G VE A E   EM   G   +A SY  +V  Y  +G +  A   L  M ++G
Sbjct: 72  MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWT 312
            + +  TLTLLI  +C +     +++A ++L EM ++ G   + Y +  LIDG CK G  
Sbjct: 132 VMRNKVTLTLLIKGYCKQC---KVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKM 188

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
             A R+  ++++    K N+    ++I+GYCK  +++  E LL  M++  L P++ +Y +
Sbjct: 189 GDAIRVRDEMLKV-GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCT 247

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+ G+C+ G   +A+++ D M ++G  P +  YN ++ GLC+ G  ++A  L     QR 
Sbjct: 248 LVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRG 307

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  +++ Y  LL    K  +  +AL L+  ++  G+N  I+A+ T+I   C+        
Sbjct: 308 VTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM------- 360

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
                                       G +  A + F+RM ++GC PD ITY  L  G 
Sbjct: 361 ----------------------------GEMDGAKETFKRMEELGCKPDGITYRTLSDGY 392

Query: 553 CKQSKLDEA---------------CQFYESMI--------------------GKGISPCE 577
           CK   ++EA                + Y S+I                     +G+SP  
Sbjct: 393 CKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNV 452

Query: 578 VTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
           VT   L   +C QG    A     E + K      +  + ++  L    R+  A +   K
Sbjct: 453 VTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 512

Query: 635 LLGKDQNVDRVSLAALKNA 653
           ++  D  +D   L   +NA
Sbjct: 513 MVDFDLVLDHRCLEDFQNA 531



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 199/462 (43%), Gaps = 74/462 (16%)

Query: 153 HEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +EV  C ++    ++G      ++  ++   G+       N ++   C++G ++ A+E F
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETF 370

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEA----------------------------D 243
             M   G   D  +Y+ +   YC++G V EA                             
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTS 430

Query: 244 RWLSAMLD-------RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           + +S ++D       RG   +  T   LI  +CD+G    + +AF    EM+ KG+ PNV
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQG---RLDKAFSAYFEMIGKGFAPNV 487

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLV--------------------RSDNYK------- 329
              + ++  L + G  ++A  L  K+V                    + D +K       
Sbjct: 488 IICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDE 547

Query: 330 -------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                  PN   Y   ++G CK  K+N A      +      P+  TY +LI+G    G 
Sbjct: 548 SAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGY 607

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A++L D M  +G  PNI  YNA+++GLCK G +  A  L  K   + L  + +TY I
Sbjct: 608 VNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNI 667

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + K    ++AL L  +M+K G++P I  Y++LI  FC+Q  ++E+ K   E   + 
Sbjct: 668 LIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN 727

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  T  T++ ++ G ++ G++    K    M  + C    IT
Sbjct: 728 VDQTIATFSKLVEGCIQHGDVKKMSK-LHNMMHMACPSAGIT 768



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 163/367 (44%), Gaps = 38/367 (10%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           +KG  + A  +F  + +    KP++ +  +++S   K  +   A ++ ++M+   ++P+ 
Sbjct: 8   EKGMVKNALHVFDNMGKYGR-KPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDV 66

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T   ++  +CK G  ERA + +  M K G   N  +YN+++DG    G ++ A  +LK 
Sbjct: 67  FTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKF 126

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQK 486
             ++ +  +K+T T+L+  + KQ + ++A  +   M K  G+  D +AY  LI  +C+  
Sbjct: 127 MSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVG 186

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           KM ++ +   E +  GL        S+I GY ++G +    +    M ++   PD+ +Y 
Sbjct: 187 KMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            L+ G C+     +A    + M+ KGI P  V                            
Sbjct: 247 TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVV---------------------------- 278

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----L 662
               T NTL++ LC       A   +H +L +    + V    L +  ++   ++    L
Sbjct: 279 ----TYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTL 334

Query: 663 FSDLSQR 669
           + D+  R
Sbjct: 335 WDDILAR 341



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 3/175 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S+G+F   +     ++  F+  G + E F++  EM N GL    +T N ++   C+ G 
Sbjct: 583 LSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGY 642

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +FD++  +G+  +  +Y +++  YC+ G   EA      ML  G      T + 
Sbjct: 643 LDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSS 702

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           LI  FC +     +++A +LL EM        + T + L++G  + G  +K  +L
Sbjct: 703 LINGFCKQ---SDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 76/165 (46%)

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           ++L  + ++   K AL +F  M K G  P + +  +L++   ++ +   +   + +    
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            + P   T   M+  Y + G +  AV++ + M ++G   + ++Y +L+ G      ++ A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
               + M  KG+   +VT   L   YCKQ     A  +L  ++K+
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKE 165



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 4/177 (2%)

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++  +  +  +K +   F      G  P+  +  S++   ++ G   SAV  + +M ++ 
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD  T   +++  CK  K++ A +F   M   G     V+  +L   Y   GD   A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 598 IILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQ-NVDRVSLAAL 650
            +L+ + +K  +R   T+  LI+  C + +V  A     ++  +D   VD  +  AL
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGAL 178


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 212/430 (49%), Gaps = 23/430 (5%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G ++ A  +  EM    V  DA +Y  ++   C  GR   A   L  ML 
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           R  + D  T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G 
Sbjct: 187 RRCVPDVVTYTILLEATCK---RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 243

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   FLK + S   +PN  +Y  ++ G C  E+   AE L+  M ++G  PN  T+ 
Sbjct: 244 VDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A ++++ + K GCTPN  +YN ++   CK+ ++ +A   L     R
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D ++Y  LL+   +  E   A+ L  ++   G  P + +Y T+I    +  K KE+
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 422

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E ++ GL P   TY+++  G  R+  I  A++ F ++  +G  P+ + Y A+I G
Sbjct: 423 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK+ +   A   +  MIG G  P E                +T  I++E L  +  I+ 
Sbjct: 483 LCKRRETHSAIDLFAYMIGNGCMPNE----------------STYTILIEGLAYEGLIKE 526

Query: 612 VNTLIRKLCS 621
              L+ +LCS
Sbjct: 527 ARDLLDELCS 536



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 15/419 (3%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           DA +   ++      GR  EA R L+A        D      ++  +C  G    +  A 
Sbjct: 95  DAGTCAALIKKLSASGRTAEARRVLAACGP-----DVMAYNAMVAGYCGAG---QLDAAR 146

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            L+ EM     +P+ YT+  LI GLC +G T  A  +  +++R     P+V TYT ++  
Sbjct: 147 RLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR-RCVPDVVTYTILLEA 202

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK     +A  LL+ M+++G  P+  TY  ++ G C+ G  + A + +  +   GC PN
Sbjct: 203 TCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 262

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
             +YN ++ GLC   R ++A EL+ +  Q+    + +T+ +L+S   ++   + AL +  
Sbjct: 263 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           ++ K G  P+  +Y  L+ AFC+QKKM ++  F    ++ G +P   +Y +++    R G
Sbjct: 323 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 382

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  AV+   ++   GCAP  I+Y  +I GL K  K  EA +    M+ KG+ P  +T  
Sbjct: 383 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 442

Query: 582 TLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           T+A   C++    D+  A   ++ +  +      N +I  LC  +    A   F  ++G
Sbjct: 443 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 501



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 16/336 (4%)

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L ++G  ++A RL          +P+  T  A+I       +   A  +L         P
Sbjct: 75  LVRRGELDEALRLV-----GSARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----P 124

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +   Y +++ G+C  G  + A  L+  M  E   P+ Y YN +I GLC +GR   A  +L
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +  +R    D +TYTILL    K++  KQA+ L   M   G  PDI  Y  ++   C++
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++ ++ +F +   + G  P   +Y  ++ G         A +    M Q GC P+ +T+
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             LIS LC++  ++ A +  E +   G +P  ++   L + +CKQ     AM  L+ +  
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +     I + NTL+  LC    V +A    H+L  K
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 66/263 (25%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R ++   ++ EM   G P    T N ++   C  GLVE A EV +++   G   ++ SY 
Sbjct: 278 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----------------DK 271
            ++ A+C+  ++ +A  +L  M+ RG   D  +   L+TA C                DK
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397

Query: 272 GFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           G                  G  K+A ELL EMV KG +P++ T++ +  GLC++   E A
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457

Query: 316 FRLFLKL----VRSDNY------------------------------KPNVHTYTAMISG 341
            R F K+    +R +                                 PN  TYT +I G
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517

Query: 342 YCKEEKMNRAEMLLERMKEQGLL 364
              E  +  A  LL+ +  +G++
Sbjct: 518 LAYEGLIKEARDLLDELCSRGVV 540


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 239/510 (46%), Gaps = 9/510 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++      G ++E F    EM + GL     T   ++   C+ G  + A+ + DEM   G
Sbjct: 284 LIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG 343

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  ++  + R G   EA + +  M   G   +  T   LI   C  G  G   
Sbjct: 344 LMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG--- 400

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L++M + G+  +  T+ ++I+G  ++   E+AF L L  +R     PNV+TY+ +
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF-LLLNEMRKGGISPNVYTYSII 459

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C+  +  RA  LLE+M   GL PN   Y  LI G+C+ G+F  A + +  M +E  
Sbjct: 460 INGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENL 519

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP++Y YN++I GL   G++ EA E   +  ++  Q +  TY  L+  +      ++A  
Sbjct: 520 TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQ 579

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+ +GLNP+   Y  ++  + +   +++     +  +  GL P    Y  +I    
Sbjct: 580 LLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLS 639

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G++ +AV     + + G  PD++ YG+LISG CK + +++A    + M  KGI P   
Sbjct: 640 SSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
               L   +CK  D + A  I  S+  K       T  TLI   C    +  A   ++++
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759

Query: 636 LGKDQNVDRVSLAALKNACYESN--KYALF 663
           L +    D    + L   C  S   + ALF
Sbjct: 760 LTEGVAPDAFVYSVLAAGCSNSGDLQQALF 789



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 221/460 (48%), Gaps = 39/460 (8%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S  +  R   V+  +V ++ + GR+++G  +V+ M + GL       N ++        
Sbjct: 164 LSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADA 223

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++   +V   M   G+  D  +Y  ++ AYC++                           
Sbjct: 224 LDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVR-------------------------- 257

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
                        ++ A +++EEM   G   NV T+  LI GLC+ G  E+AF  + K +
Sbjct: 258 ------------DLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG-YKKEM 304

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                 P+  TY A+I+G CK  + ++A+ LL+ M   GL+PN   Y++LI G  + GN 
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNA 364

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A+ ++  M   G  PN   Y+ +I GLCK GR+  A  +LK+  +    AD +TY ++
Sbjct: 365 DEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  HL+Q   ++A  L   M K G++P+++ Y+ +I   C+  + + +    ++ I  GL
Sbjct: 425 IEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y  +I GY R+G+ S A +  ++M +    PD   Y +LI GL    K+DEA +
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +Y+ M+ KG  P + T   L + Y   G+   A  +L  +
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 238/554 (42%), Gaps = 78/554 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GR  +   ++ EM+  GL       + ++      G  + A ++  EM A G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++   C++GR+  A R L  M   G + D  T  L+I     +  +   +
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNK---E 435

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF LL EM + G  PNVYT++++I+GLC+ G +E+A  L  +++ +D  KPN   Y  +
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI-ADGLKPNAFVYAPL 494

Query: 339 ISGYCKEE-----------------------------------KMNRAEMLLERMKEQGL 363
           ISGYC+E                                    KM+ A    + M E+G 
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------ 411
            PN  TY  LI+G+   GN E+A  L+  M   G  PN + Y  I++G            
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614

Query: 412 -----------------------LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
                                  L   G +Q A  +L    +  L  D + Y  L+S   
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K A+ ++A+GL   M K G+ P I  Y  LI  FC+   +  +   F   I  GL P   
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYT++I GY + G+I  A+  +  M   G APD   Y  L +G      L +A    E M
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 569 IGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRV 625
           I +G +       TL + +CK+G    T   +   +DK +   + TV  ++  L    ++
Sbjct: 795 IARGYAIISSFN-TLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 626 GMAALFFHKLLGKD 639
             A   F +L  K+
Sbjct: 854 SEAHTIFVELQQKN 867



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 204/492 (41%), Gaps = 94/492 (19%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           +E F ++ EM   G+     T + ++   C++G  E A  + ++M A G+  +A  Y  +
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +  YCR G  + A   L  M       D      LI    + G    + +A E  +EM+ 
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG---KMDEAIEYYDEMLE 551

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           KG++PN +T+  LI G    G  EKA +L  +++ S    PN   Y  ++ GY K + + 
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS-GLNPNDFIYAQILEGYFKSDNLE 610

Query: 350 RAEMLLERMKEQGLLPNTN-----------------------------------TYTSLI 374
           +    L+ M E+GL+P+                                      Y SLI
Sbjct: 611 KVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLI 670

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G CK  + E+A  L+D M K+G  P I  YNA+IDG CK   +  A  +      + L 
Sbjct: 671 SGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLP 730

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD----------------------- 471
            + +TYT L+  + K  + + A+ L+  M+  G+ PD                       
Sbjct: 731 PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFI 790

Query: 472 -----------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
                      I ++ TL+  FC++ K++E+ KF    +   + P+  T  +++ G    
Sbjct: 791 TEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEA 850

Query: 521 GNISSAVKYFQRMNQI--------------------GCAPDNITYGALISGLCKQSKLDE 560
           G +S A   F  + Q                     G  P ++ +  +I   CKQ  LD+
Sbjct: 851 GKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDK 909

Query: 561 ACQFYESMIGKG 572
           A   +++++ KG
Sbjct: 910 ALMLHDALVAKG 921



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 151/312 (48%), Gaps = 3/312 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V+TY+ +I  YCK   +  A+ ++E M+E G   N  TY +LI G C+ G  E A+  
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P+ + Y AII+GLCK+GR  +A  LL +     L  + + Y+ L+   ++
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           Q    +A  +   M  AG+ P+   Y  LI   C+  +M  + +  ++    G      T
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I G+LR  N   A      M + G +P+  TY  +I+GLC+  + + A    E MI
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVG 626
             G+ P       L   YC++G  + A   L+ + ++     +   N+LI  L +  ++ 
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540

Query: 627 MAALFFHKLLGK 638
            A  ++ ++L K
Sbjct: 541 EAIEYYDEMLEK 552



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 68/391 (17%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVR--------------------KGWKPNVYTHTVLI 303
           L  + C  G      QA  LL++M+R                    +G +P V    VL+
Sbjct: 126 LAVSLCAAGL---YPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD--VLV 180

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           D   K G       + L L++     P++     ++    + + ++    +   M+  G+
Sbjct: 181 DTYKKTGRVRDGAEVVL-LMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGI 239

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TY++LI  +CKV + E A  +++ M + GC+ N+  YN +I GLC+ G ++EA+ 
Sbjct: 240 SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF- 298

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
                +++E++                                GL PD   Y  +I   C
Sbjct: 299 ----GYKKEME------------------------------DYGLVPDGFTYGAIINGLC 324

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           ++ +  +++    E   AGL P    Y+++I G++R GN   A K  + M+  G  P+ I
Sbjct: 325 KRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKI 384

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI GLCK  ++  A +  + M   G     +T   +   + +Q +   A ++L  +
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444

Query: 604 DK---KLWIRTVNTLIRKLC----SEKRVGM 627
            K      + T + +I  LC    SE+  G+
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGL 475


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 212/430 (49%), Gaps = 23/430 (5%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G ++ A  +  EM    V  DA +Y  ++   C  GR   A   L  ML 
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           R  + D  T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G 
Sbjct: 61  RRCVPDVVTYTILLEATCK---RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   FLK + S   +PN  +Y  ++ G C  E+   AE L+  M ++G  PN  T+ 
Sbjct: 118 VDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A ++++ + K GCTPN  +YN ++   CK+ ++ +A   L     R
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D ++Y  LL+   +  E   A+ L  ++   G  P + +Y T+I    +  K KE+
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E ++ GL P   TY+++  G  R+  I  A++ F ++  +G  P+ + Y A+I G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK+ +   A   +  MIG G  P E                +T  I++E L  +  I+ 
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNE----------------STYTILIEGLAYEGLIKE 400

Query: 612 VNTLIRKLCS 621
              L+ +LCS
Sbjct: 401 ARDLLDELCS 410



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 189/378 (50%), Gaps = 10/378 (2%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++  +C  G    +  A  L+ EM     +P+ YT+  LI GLC +G T  A  +  +++
Sbjct: 6   MVAGYCGAG---QLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R     P+V TYT ++   CK     +A  LL+ M+++G  P+  TY  ++ G C+ G  
Sbjct: 60  RR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A + +  +   GC PN  +YN ++ GLC   R ++A EL+ +  Q+    + +T+ +L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   ++   + AL +  ++ K G  P+  +Y  L+ AFC+QKKM ++  F    ++ G 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           +P   +Y +++    R G +  AV+   ++   GCAP  I+Y  +I GL K  K  EA +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLC 620
               M+ KG+ P  +T  T+A   C++    D+  A   ++ +  +      N +I  LC
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358

Query: 621 SEKRVGMAALFFHKLLGK 638
             +    A   F  ++G 
Sbjct: 359 KRRETHSAIDLFAYMIGN 376



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           AYNA++ G C  G++  A  L+    +  ++ D  TY  L+     +  T  AL +   M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++    PD+  YT L+ A C++   K++ K   E    G  P   TY  ++ G  ++G +
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+++ + +   GC P+ ++Y  ++ GLC   + ++A +    M  KG  P  VT   L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
               C++G    A+ +LE + K        + N L+   C +K++  A  F   ++ +  
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             D VS   L  A   S +  +  +L  ++ +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 270


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 235/496 (47%), Gaps = 46/496 (9%)

Query: 106 SLANEAGSMVALSFFYWAIGF--AKFRHFMRLYIVCAT---SLISNGNFERAHEVMQCMV 160
           + A+ A S+ A S F  A G      R +    +V A+   +L  +G+  R+  V+  +V
Sbjct: 124 AFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGH--RSPAVLDVLV 181

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            ++ + GR+++   +V+ M + G+       N ++        +    +V + M   G+ 
Sbjct: 182 DTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGIS 241

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            D  +Y  ++ AYC+   V E D                                    A
Sbjct: 242 PDVYTYSTLIEAYCK---VREFD-----------------------------------TA 263

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            ++L EM  +G   N  T+ VLI GLC+ G  E+AF  F K +      P+  TY A+I+
Sbjct: 264 KKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVPDGFTYGALIN 322

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G CK  + N A+ LL+ M    L PN   Y +LI G  + GN + A+ ++  M   G  P
Sbjct: 323 GLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 382

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N   Y+ ++ GLCK G++  A  LLK+  +   + D ITY +++  H +    K A  L 
Sbjct: 383 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 442

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M  AG++P+++ Y+ +I   C+  + +++    +E  T GL P    Y  +I GY R+
Sbjct: 443 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 502

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           GN+S A + F +M ++   PD   Y +LI GL K  +++E+ +++  M  +G+ P E T 
Sbjct: 503 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 562

Query: 581 VTLAYEYCKQGDSATA 596
             L + Y K GD  +A
Sbjct: 563 SGLIHGYLKNGDLESA 578



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 237/520 (45%), Gaps = 10/520 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G   E F M+ EM   G+     T + +V   C++G ++ A  +  +M    
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y L++  + R     +A R LS M + G   +  T +++I   C  G     +
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG---EPE 471

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LLEEM  KG KPN + +  LI G C++G    A  +F K+ +  N  P+++ Y ++
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSL 530

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K  ++  +     +M+E+GLLPN  TY+ LI+G+ K G+ E A  L+  M   G 
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +++   K   +++     K    + +  D   Y IL+         + A  
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   + K G  PD+H Y++LI+  C+    +++     E    G+ P    Y ++I G  
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+IS A   F  +   G  P+ +TY +LI G CK   +  A   Y  M+  GI+P   
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 579 TRVTLAYEYCKQGDSATAMIILES--LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               L       GD   AM ++E   L     I + N L+   C   ++       H ++
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM 830

Query: 637 GKDQNVDRVSLAALKNACYESNK----YALFSDLSQRIAE 672
           G+    + +++  + +   E+ K    + +F +L Q+ +E
Sbjct: 831 GRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 870



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 242/534 (45%), Gaps = 42/534 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++ ++        +++EM   G  L T T N ++   C  G VE A     +M   G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y  ++   C+  R  EA     A+LD  +  +     ++     D   R G+ 
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEA----KALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------------ 325
            +AF++++EMV  G +PN  T+  L+ GLCK G  ++A  L  ++VR             
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 326 -----------DNYK-----------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                      D ++           PNV+TY+ MI G C+  +  +A  LLE M  +GL
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   Y  LI G+C+ GN   A ++ D M K    P++Y YN++I GL K GRV+E+ +
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
              +  +R L  ++ TY+ L+  +LK  + + A  L  RM+  GL P+   Y  L+ ++ 
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   +++    F+  +  G+      Y  +I      GN+ +A +    + + G  PD  
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            Y +LISGLCK +  ++A    + M  KG+ P  V    L    CK GD + A  +  S+
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725

Query: 604 DKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             K  +    T  +LI   C    +  A   ++++L      D    + L   C
Sbjct: 726 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 224/532 (42%), Gaps = 60/532 (11%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           FRH  +       S + N            M+    + G  ++   ++ EMT  GL    
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                ++   C  G V  A E+FD+M    V  D   Y  ++    ++GRV E+ ++ + 
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M +RG + +  T + LI  +   G    ++ A +L++ M+  G KPN   +  L++   K
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNG---DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 606

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               EK    F  ++       N   Y  +I        M  A  +L  +++ G +P+ +
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDN-RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+SLI G CK  + E+A+ ++D M K+G  PNI  YNA+IDGLCK G +  A  +    
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD----------------- 471
             + L  + +TYT L+    K  +   A  L+  M+  G+ PD                 
Sbjct: 726 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 785

Query: 472 -----------------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
                            I ++  L+  FC++ KM+E+ K     +  GL P   T  ++I
Sbjct: 786 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 845

Query: 515 CGYLRDGNIS---------------SAVKYFQRM-----NQIGCAPDNITYGALISGLCK 554
            G    G +S               SA ++F  +     NQ G  P ++    +I   CK
Sbjct: 846 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ-GKIPLDVV-DDMIRDHCK 903

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           +  LD+A    + ++ K       + + +    C++G  + A+ +L+ +DK+
Sbjct: 904 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 955



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 14/369 (3%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-----WTEKAFRLFLKLVRSDNYK 329
           G ++ A E++  M  +G  P++     L+  L +       W  + F +           
Sbjct: 188 GRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV------GAGIS 241

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V+TY+ +I  YCK  + + A+ +L  M+E+G   NT TY  LI G C+ G  E A+  
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P+ + Y A+I+GLCK  R  EA  LL +    EL+ + + Y  L+   ++
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           +    +A  +   MV AG+ P+   Y  L+   C+  +M  +    ++ +     P   T
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I G+ R  +   A +    M   G +P+  TY  +I GLC+  + ++A    E M 
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVG 626
            KG+ P       L   YC++G+ + A  I + + K   +  +   N+LI  L    RV 
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541

Query: 627 MAALFFHKL 635
            +  +F ++
Sbjct: 542 ESTKYFAQM 550



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 40/346 (11%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIE 178
           R+Y +   +L S+GN E A  V+                 ++S   +    ++ F ++ E
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M+  G+       N ++   C+ G + YA  VF+ + A+G+  +  +Y  ++   C++G 
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           ++ A    + ML  G   D    ++L T  C     G ++QA  L+EEM  +G   ++ +
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSA--GDLEQAMFLIEEMFLRG-HASISS 805

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
              L+DG CK+G  ++  +L L ++      PN  T   +ISG  +  K++    +   +
Sbjct: 806 FNNLVDGFCKRGKMQETLKL-LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864

Query: 359 KE-------------------QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           ++                   QG +P  +    +I  HCK GN ++A  L D++  +   
Sbjct: 865 QQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 923

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
               +Y AI+D LC+KG++ EA  LLK+  +R +   +    ILL+
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLT 969



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 146/356 (41%), Gaps = 56/356 (15%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E     F  M  +GV  D   Y +++      G +  A R LS +   G++ D    + 
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI+  C    R   ++AF +L+EM +KG  PN+  +  LIDGLCK G    A  +F  ++
Sbjct: 670 LISGLCKTADR---EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 726

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT---------------- 367
            +    PN  TYT++I G CK   ++ A  L   M   G+ P+                 
Sbjct: 727 -AKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 785

Query: 368 ------------------NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
                             +++ +L+ G CK G  +    L+ ++   G  PN      II
Sbjct: 786 EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 845

Query: 410 DGLCKKGRVQEAY----ELLKKA-----------FQRELQADKITYTI---LLSEHLKQA 451
            GL + G++ E +    EL +K            F   +   KI   +   ++ +H K+ 
Sbjct: 846 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEG 905

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
              +AL L   +V         +Y  ++   CR+ K+ E+    +E    G+ P++
Sbjct: 906 NLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSE 961



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y + G +  A +    M   G AP      AL+  L +   +    +  E M+G GISP 
Sbjct: 184 YKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPD 243

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
             T  TL   YCK  +  TA  +L  + ++   L   T N LI  LC    V
Sbjct: 244 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 223/440 (50%), Gaps = 10/440 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E   +  ++M  RG   D  +   ++   C+ G+  +A R +  + D GA+ D  T 
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI+ +C  G  GS   A +LL+ M      P+V T+  ++  LC  G  ++A  +  +
Sbjct: 184 NVLISGYCKTGEIGS---ALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++ + Y P+V TYT +I   CKE  + +A  LL+ M+++G  P+  TY  LI G CK G
Sbjct: 238 QMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   ++ M   GC PN+  +N I+  +C  GR  +A + L +  ++      +T+ 
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +A+ +  +M + G  P+  +Y  L+ A C+ KKM+ + ++    ++ 
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY +++    +DG +  AV+   ++   GC+P  ITY  +I GL K  K D+A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMI-ILESLDKKLWIRTVNTLIRK 618
            +  + M GKG+ P  +T  TL     ++G  D A A    LE +  K    T N+++  
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 619 LCSEKRVGMAALFFHKLLGK 638
           LC  ++   A  F   ++ +
Sbjct: 537 LCKARQTVRAIDFLAYMVAR 556



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 200/415 (48%), Gaps = 7/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + + G +     ++  M+ +  P +  T N ++   C+ G ++ A EV D    R 
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVS--PDVV-TYNTILRTLCDSGKLKEAMEVLDRQMQRE 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++ A C+   V +A + L  M D+G   D  T  +LI   C +   G + 
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE---GRLD 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A   L  M   G +PNV TH +++  +C  G    A +   +++R     P+V T+  +
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSVVTFNIL 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C++  + RA  +LE+M + G  PN+ +Y  L++  CK    ERA + +D+M   GC
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN ++  LCK G+V  A E+L +   +      ITY  ++    K  +T  A+ 
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   GL PDI  Y+TL+    R+ K+ E+  FF +    G+ P   TY S++ G  
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +      A+ +   M   GC P   +Y  LI GL  +    EA +    +  +G+
Sbjct: 539 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 33/283 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +    + EM   G      T N ++   C  GL+  A +V ++M   G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
              ++ SY  ++ A C+  ++  A  +L  M+ RG   D  T   L+TA C  G      
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G    A +LL+EM  KG KP++ T++ L+ GL
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            ++G  ++A   F  L      KPN  TY +++ G CK  +  RA   L  M  +G  P 
Sbjct: 503 SREGKVDEAIAFFHDL-EEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT 561

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
             +Y  LI G    G  + A +L++ +   G      A   ++
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 35/259 (13%)

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L + G ++E ++ L+    R    D I  T L+    K  +T +A  +   +  +G  PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 472 IHAYTTLIAAFCR--------------------------------QKKMKESEKFFQEAI 499
           +  Y  LI+ +C+                                  K+KE+ +     +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
               +P   TYT +I    ++  +  A+K    M   GC PD +TY  LI+G+CK+ +LD
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
           EA +F   M   G  P  +T   +    C  G    A   L  + +K     + T N LI
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359

Query: 617 RKLCSEKRVGMAALFFHKL 635
             LC +  +G A     K+
Sbjct: 360 NFLCRKGLIGRAIDVLEKM 378



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           L   ++  E ++       MV  G  PDI A T+LI   C+  K  ++ +  +    +G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY  +I GY + G I SA++   RM+    +PD +TY  ++  LC   KL EA +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DK--KLWIRTVNTLIRKLC 620
             +  + +   P  +T   L    CK+     AM +L+ + DK  K  + T N LI  +C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 621 SEKRVGMAALFFHKL 635
            E R+  A  F + +
Sbjct: 294 KEGRLDEAIRFLNHM 308



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 12/176 (6%)

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R  +++E  KF ++ +  G  P     TS+I G  + G    A +  + +   G  PD I
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LISG CK  ++  A Q  + M    +SP  VT  T+    C  G    AM   E L
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAM---EVL 235

Query: 604 DKKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           D+++       + T   LI   C E  VG A     ++  K    D V+   L N 
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +    K+ + M   G  PD I   +LI GLCK  K  +A +  E +   G  P  
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   L   YCK G+  +A+ +L+ +     + T NT++R LC   ++  A     + + 
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           ++   D ++   L  A C ES
Sbjct: 241 RECYPDVITYTILIEATCKES 261


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 241/522 (46%), Gaps = 23/522 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y    + L+ +G F++AH+V   M               + SF    R      ++  M+
Sbjct: 114 YNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMS 173

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G  +       VVG   E    +   E+F +M A GV    S++  ++   C+ G V 
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVK 233

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           E ++ L  ++ RG + +  T    I   C KG    +  A  ++  ++ +G KP+V T+ 
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG---ELDAAVRMVGRLIDQGPKPDVVTYN 290

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI GLCK    ++A  ++L  + ++  +P+  TY  +I+GYCK   +  AE +L     
Sbjct: 291 YLIYGLCKNSKFQEA-EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVF 349

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G +P+  TY SLI G C  G   RA  L +    +G  PN+  YN +I GL  +G + E
Sbjct: 350 NGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILE 409

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +L  +  ++ L  +  T+ IL++   K      A GL   M+  G  PDI  +  LI 
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +  Q KM+ + +     +  G+ P   TY S++ G  +       ++ ++ M + GCAP
Sbjct: 470 GYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAP 529

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           +  T+  L+  LC+  KLD+A    E M  K ++P  VT  TL   +CK GD   A  + 
Sbjct: 530 NLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589

Query: 601 ESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             +++   +     T N +I     +  V MA   F +++ +
Sbjct: 590 RKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 254/573 (44%), Gaps = 52/573 (9%)

Query: 114 MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM-------------- 159
           M AL  F        F+H +  Y      L   G FE   EV+  M              
Sbjct: 21  MKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYV 80

Query: 160 --VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
             + ++   G+++E  ++   M          + N ++ I  + G  + A +V+  M  R
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR 140

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF---- 273
           G+  D  S+ + + ++CR  R   A R L+ M  +G  ++      ++  F ++ F    
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200

Query: 274 ----------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                       +G +K+  +LL++++++G  PN++T+   I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+KG  + A R+  +L+     KP+V TY  +I G CK  K   AE+ L ++  +GL P
Sbjct: 261 LCQKGELDAAVRMVGRLI-DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEP 319

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           ++ TY +LI G+CK G  + A  ++      G  P+ + Y ++IDGLC +G    A  L 
Sbjct: 320 DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALF 379

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +A  + ++ + I Y  L+     Q    +A  L   M + GL P++  +  L+   C+ 
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM 439

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             + +++   +  I+ G FP   T+  +I GY     + +A++    M   G  PD  TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTY 499

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +L++GLCK SK ++  + Y++M+ KG +P   T   L    C+      A+ +LE +  
Sbjct: 500 NSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKN 559

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           K       T  TLI   C    +  A   F K+
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 235/519 (45%), Gaps = 43/519 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F E     EG+ +  +M  +G+ L  ST N+++ + C+ G V+  E++ D++  RG
Sbjct: 187 VVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRG 246

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y   +   C+ G +  A R +  ++D+G   D  T   LI   C        +
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK---NSKFQ 303

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A   L ++V +G +P+ +T+  LI G CK G  + A R+ +  V  + + P+  TY ++
Sbjct: 304 EAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV-FNGFVPDEFTYRSL 362

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C E + NRA  L      +G+ PN   Y +LI G    G    A  L   M ++G 
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  +N +++GLCK G V +A  L+K    +    D  T+ IL+  +  Q + + AL 
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+  G++PD++ Y +L+   C+  K ++  + ++  +  G  P   T+  ++    
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA--------------C-- 562
           R   +  A+   + M      PD +T+G LI G CK   LD A              C  
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602

Query: 563 --------------------QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
                               + ++ M+ + + P   T   +   +CK G+       L  
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLE 662

Query: 603 LDKKLWIRTVNTL---IRKLCSEKRVGMAALFFHKLLGK 638
           + +  +I ++ TL   I  LC E RV  AA   H+++ K
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 4/364 (1%)

Query: 279 QAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A E+   M ++ G+K  + T+  +I+ L   G  E    + + + ++         Y  
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            +  Y ++ K+  A  + ERM      P   +Y +++      G F++A+ +   M   G
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            TP++Y++   +   C+  R   A  LL     +  + + + Y  ++    ++    +  
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF +M+ +G++  +  +  L+   C++  +KE EK   + I  G+ P   TY   I G 
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G + +AV+   R+   G  PD +TY  LI GLCK SK  EA  +   ++ +G+ P  
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
            T  TL   YCK G    A  IL +     ++    T  +LI  LC E     A   F++
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381

Query: 635 LLGK 638
            LGK
Sbjct: 382 ALGK 385



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 38/373 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   +  G + E   +  EM+  GL     T N +V   C++G V  A+ +   M ++G
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
              D  ++ +++  Y    ++  A   L  M+D G   D  T   L+   C         
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516

Query: 270 -------DKG-----FRGSI-----------KQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                  +KG     F  +I            +A  LLEEM  K   P+  T   LIDG 
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G  + A+ LF K+        +  TY  +I  + ++  +  AE L + M ++ L P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY  ++ G CK GN +  Y  +  M + G  P++     +I+ LC + RV EA  ++ 
Sbjct: 637 GYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  Q+ L  + +  TI   +H K+      L L   + K+ +    +AY  L     R K
Sbjct: 697 RMVQKGLVPEAVN-TIF--DHDKKEVAAPKLVLEDLLKKSCIT--YYAYELLFDGL-RDK 750

Query: 487 KMKESEKFFQEAI 499
           ++++ + F   AI
Sbjct: 751 RLRKKKGFTVVAI 763


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 212/434 (48%), Gaps = 23/434 (5%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G ++ A  +  +M       D+ +Y  ++   C  GR   A   L  ML 
Sbjct: 128 NAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLDDMLR 184

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG + D  T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G 
Sbjct: 185 RGCVPDVVTYTILLEATCK---RSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   FLK + S   +PN  +Y  ++ G C  E+   AE L+  M ++G  PN  T+ 
Sbjct: 242 VDDAIE-FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN 300

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A +++D + K GCTPN  +YN I+   CK+ ++  A   ++    R
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D ++Y  LL+   +  E   A+ L  ++   G  P + +Y T+I    +  K KE+
Sbjct: 361 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEA 420

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E +T GL P   TY+++  G  R+  I  A++ F ++  +G  P+ + Y A++ G
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK+ +   A   +  MI  G  P E                +T  I++E L  +  ++ 
Sbjct: 481 LCKRRETHNAIDLFIYMISNGCMPNE----------------STYTILIEGLTYEGLVKE 524

Query: 612 VNTLIRKLCSEKRV 625
              L+ +LCS   V
Sbjct: 525 ARELLGELCSRGVV 538



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 167 GRLKEGFSMVI--EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           GR + G ++V+  +M   G      T   ++   C+    + A ++ DEM A+G   D  
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y ++V   C+ GRV +A  +L ++   G   +  +  +++   C        + A +L+
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA---ERWEDAEKLM 284

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM +KG+ PNV T  +LI  LC++G  E A  +  ++ +     PN  +Y  ++  +CK
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY-GCTPNSLSYNPILHAFCK 343

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           ++KM+RA   +E M  +G  P+  +Y +L+   C+ G  + A +L+  +  +GCTP + +
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 403

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +IDGL K G+ +EA ELL +   + LQ D ITY+ + S   ++   ++A+  FC++ 
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+ P+   Y  ++   C++++   +   F   I+ G  P + TYT +I G   +G + 
Sbjct: 464 DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVK 523

Query: 525 SA 526
            A
Sbjct: 524 EA 525



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 200/414 (48%), Gaps = 13/414 (3%)

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           +  + N +P    + +R+ G+    G +E A  + + M      A       ++   C  
Sbjct: 49  VAASPNAVPHRAVSNDRLRGLV-RRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCAS 107

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           GR  EA R L+A        D      ++  +C     G +  A  L+ +M     +P+ 
Sbjct: 108 GRTAEARRVLAACEP-----DVMAYNAMVAGYC---VTGQLDAARRLVADM---PMEPDS 156

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           YT+  LI GLC +G T  A  +   ++R     P+V TYT ++   CK     +A  LL+
Sbjct: 157 YTYNTLIRGLCGRGRTGNALVVLDDMLRR-GCVPDVVTYTILLEATCKRSGYKQAMKLLD 215

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M+ +G  P+  TY  ++ G C+ G  + A + +  +   GC PN  +YN ++ GLC   
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R ++A +L+ +  Q+    + +T+ +L+S   ++   + A+ +  ++ K G  P+  +Y 
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            ++ AFC+QKKM  +  F +  ++ G +P   +Y +++    R G + +AV+   ++   
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           GC P  I+Y  +I GL K  K  EA +    M+ KG+ P  +T  T++   C++
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 45/367 (12%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTH--TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           RG +++A  L+E M   G +P+        LI  LC  G T +A R+          +P+
Sbjct: 72  RGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAAC------EPD 123

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y AM++GYC   +++ A  L+  M  +   P++ TY +LI G C  G    A  ++D
Sbjct: 124 VMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLD 180

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + GC P++  Y  +++  CK+   ++A +LL +   +    D ITY ++++   ++ 
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A+     +   G  P+  +Y  ++   C  ++ +++EK   E    G  P   T+ 
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN 300

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I    R G +  A++   ++ + GC P++++Y  ++   CKQ K+D A  F E M+ +
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
           G  P                                 I + NTL+  LC    V  A   
Sbjct: 361 GCYP--------------------------------DIVSYNTLLTALCRGGEVDAAVEL 388

Query: 632 FHKLLGK 638
            H+L  K
Sbjct: 389 LHQLKDK 395



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 66/263 (25%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R ++   ++ EM+  G P    T N ++   C  GLVE A EV D++   G   ++ SY 
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----------------DK 271
            ++ A+C+  ++  A  ++  M+ RG   D  +   L+TA C                DK
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395

Query: 272 GFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           G                  G  K+A ELL EMV KG +P++ T++ +  GLC++   E+A
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455

Query: 316 FRLFLKL----VR------------------------------SDNYKPNVHTYTAMISG 341
            R F K+    +R                              S+   PN  TYT +I G
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515

Query: 342 YCKEEKMNRAEMLLERMKEQGLL 364
              E  +  A  LL  +  +G++
Sbjct: 516 LTYEGLVKEARELLGELCSRGVV 538


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 183/366 (50%), Gaps = 4/366 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  S  +++  +C + RV      LS +L  G      T T L+   C     G +
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLC---MEGKM 148

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            Q   L ++M+ +G +PNVYT+ V+I+ L K G   +A   FLK +      PNV  Y+ 
Sbjct: 149 DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALG-FLKQMEKVGCVPNVVNYST 207

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYC   +M+ A  + + M  +G  PN  TYTSL+ G+CK+   E A  L+D   ++G
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  +  II GLC+ GR   A +L +         + +TY +LL    K    ++A 
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M ++ + P++  YT LI + C+  K+K+ ++ F   I  GL P   TYT+++   
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  A K F++M + GC PD   Y  +I G  +      A Q  E M+ +G S   
Sbjct: 388 CKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADA 447

Query: 578 VTRVTL 583
            TR  L
Sbjct: 448 ATRALL 453



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 4/348 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  + R+  G S++ ++   GL     T   ++   C  G ++    ++D+M 
Sbjct: 100 LSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML 159

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG+  +  +Y +++ +  + G+  EA  +L  M   G + +    + LI  +C    RG
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYC---LRG 216

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A  + + MV KG  PNVYT+T L++G CK    E+A +L  + +R     P++ T+
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK-GLVPDIVTF 275

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T +ISG C+  +   A+ L   +   G  PN  TY  L+ G CK GN E A+ L   M +
Sbjct: 276 TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               PN+  Y  +ID LCK G++++  EL  +     L+ +  TYT L+    K+    +
Sbjct: 336 STVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIE 395

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           A  LF +M + G  PD  AY  +I  F + K    + +  +E +  G 
Sbjct: 396 AHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 4/285 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S ++ G+  E    + +M   G        + ++   C  G ++ A  VFD M ++G
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  YC++ R+ EA + L   L +G + D  T T +I+  C  G   + +
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q F  +      G  PN+ T+ VL+DGLCK G  E+AF LF ++ RS   KPN+  YT +
Sbjct: 293 QLFRYI---CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS-TVKPNLVIYTIL 348

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK  K+   + L  R+ ++GL PN  TYT+L+   CK G    A+ L   M ++GC
Sbjct: 349 IDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGC 408

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           TP+  AYN II G  +      A +L+++   R   AD  T  +L
Sbjct: 409 TPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 7/297 (2%)

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G+  + ++ + LI   C +   +    ++  + K G  P+I  +  +++GLC +G++ + 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L      R LQ +  TY ++++   K  +  +ALG   +M K G  P++  Y+TLI  
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           +C + +M E+   F   ++ G  P   TYTS++ GY +   I  AV+      + G  PD
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +T+  +ISGLC+  +   A Q +  +   G +P  +T   L    CK G+   A  + +
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 602 SLDK-----KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            + +      L I T+  LI  LC   ++      F +L+ +    +  +  AL  A
Sbjct: 332 EMQRSTVKPNLVIYTI--LIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 110/233 (47%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           LP    ++ L     ++G++E    L   +   G   +I++ + +I+  C   RV     
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +L K  +  L+   +T+T LL+    + +  Q + L+  M+  GL P+++ Y  +I +  
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  K  E+  F ++    G  P    Y+++I GY   G +  A   F  M   GC P+  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           TY +L++G CK  +++EA Q  +  + KG+ P  VT  T+    C+ G    A
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAA 291


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 230/482 (47%), Gaps = 20/482 (4%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A  VF EM  +    DA ++ +++   CR  ++ +A + L  M + G + D+A    L
Sbjct: 24  DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I+ +      G   QAF+ L EMV+    P V T+T ++DGLCK   T  A +L L  +R
Sbjct: 84  ISGYSKAKDFG---QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKL-LDEMR 139

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                PN++TY  ++ G C+E K++ A+ +LE M  +G  P+  TY S I G CK    +
Sbjct: 140 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 199

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A   +  M     TP++ +Y  +I+GLCK G +  A  +L     R    D +TY+ L+
Sbjct: 200 EARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLI 256

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
               K  E ++A+GL   M+K G  P++ AY +L+ A  R   + ++E    E    G  
Sbjct: 257 DGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 316

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP----------DNITYGALISGLCK 554
           P   +Y + I G  +   +  A   F RM + GC P          D + Y  L+ GLCK
Sbjct: 317 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCK 376

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKK--LWIRT 611
             + DEAC  +  ++ + I   +V    +  + +CK+     A+ I + + +K    + T
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVT 436

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
            N L+  LC + R+  A      ++ +    D V+   L +A  +  K A   +L +   
Sbjct: 437 WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 496

Query: 672 EG 673
           +G
Sbjct: 497 KG 498



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 208/432 (48%), Gaps = 19/432 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R ++   ++ EM + G      T N +V   CE   ++ A+++ +EM  RG
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y   +   C+  RV EA ++L+ M       D  + T +I   C     G + 
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS---GDLD 231

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L+ M  +G  P+V T++ LIDG CK G  E+A  L   +++    +PN+  Y ++
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL-GCRPNMVAYNSL 290

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    +   + +AE +L  M+ +G  P+  +Y + I G CK    ++A  + D M + GC
Sbjct: 291 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 399 TPN----------IYAYNAIIDGLCKKGRVQEAYELLKKAFQREL-QADKITYTILLSEH 447
           TPN          I  Y  ++DGLCK GR  EA  L  K    ++ + D   Y ++L  H
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+ +  +AL +  +M++     ++  +  L+   C   ++ ++E      +  G  P  
Sbjct: 411 CKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY +++    + G  ++A++ F+   + GC PD +TY ALI+GL  ++  +EA   +  
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529

Query: 568 MIGKGISPCEVT 579
           ++ +   P + T
Sbjct: 530 LVERRWVPDDKT 541



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 214/440 (48%), Gaps = 22/440 (5%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  +V   C+  R  +A + L  M D+G   +  T  +++   C++     + +A ++L
Sbjct: 114 TYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEER---KLDEAKKML 170

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           EEM  +G+ P+V T+   I GLCK    ++A +   ++  +    P+V +YT +I+G CK
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVVSYTTVINGLCK 226

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              ++ A  +L+ M  +G  P+  TY+SLI G CK G  ERA  L+D M K GC PN+ A
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+++  L + G + +A ++L +  +R    D ++Y   +    K    K+A  +F RMV
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346

Query: 465 KAGLNP----------DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-PTKETYTSM 513
           + G  P          DI  YT L+   C+  +  E+   F + +   +  P    Y  M
Sbjct: 347 ERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 406

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  + +   I  A++  ++M +  C  + +T+  L+ GLC   +L +A     +M+ +G 
Sbjct: 407 LDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 465

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAAL 630
            P  VT  TL    CK G SA A+ + E   K   +  V T   LI  L  E     A L
Sbjct: 466 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYL 525

Query: 631 FFHKLLGKDQNVDRVSLAAL 650
            F KL+ +    D  +L  L
Sbjct: 526 LFTKLVERRWVPDDKTLGLL 545



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 7/349 (2%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G++ NV+T+  L+  L ++   +KA  +F +++   + +P+  T+  ++ G C+  ++ +
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMI-DKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  LL RMKE G +P+   Y +LI G+ K  +F +A+  +  M K  C P +  Y  I+D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLCK  R ++A +LL +   +    +  TY +++    ++ +  +A  +   M   G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  Y + I   C+  ++ E+ KF          P   +YT++I G  + G++ SA +  
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRML 237

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M+  GC PD +TY +LI G CK  +++ A    +SM+  G  P  V   +L     + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 591 GDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
           G    A  +L  ++++ +   V   N  I  LC  +RV  A   F +++
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 187/412 (45%), Gaps = 29/412 (7%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  +++   R  R  +A      M+D+    D  T  +L+   C       +++A +LL
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSN---QLEKARKLL 65

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M   G  P+   +  LI G  K     +AF+   ++V++ +  P V TYT ++ G CK
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCK 124

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            E+   A  LL+ M+++G  PN  TY  ++ G C+    + A  +++ M   G  P++  
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+ I GLCK  RV EA + L +     +  D ++YT +++   K  +   A  +   M 
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  PD+  Y++LI  FC+  +++ +       +  G  P    Y S++    R G+I 
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A      M + G  PD ++Y A I GLCK  ++ +A   ++ M+ +G +P         
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP--------- 352

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
                   S+ +M+I++       I     L+  LC   R   A   F K+L
Sbjct: 353 ------NASSYSMLIVD-------ILLYTVLLDGLCKGGRFDEACALFSKVL 391



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 114/250 (45%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N++ YN ++  L ++ R  +A  + ++   +  Q D  T+ ILL    +  + ++A  L 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            RM + G  PD   Y  LI+ + + K   ++ KF  E +     PT  TYT+++ G  + 
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
                AVK    M   GC+P+  TY  ++ GLC++ KLDEA +  E M  +G  P  VT 
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
            +     CK      A   L  +     + +  T+I  LC    +  A+     +  +  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGC 245

Query: 641 NVDRVSLAAL 650
             D V+ ++L
Sbjct: 246 TPDVVTYSSL 255


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 213/453 (47%), Gaps = 12/453 (2%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   CR GR   A   L  ++  G +++ A+   L+TA    G     K+   LL EM 
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL---GRAREFKRMNTLLAEMK 332

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN----YKPNVHTYTAMISGYCK 344
               +PNV T  +LI+ LCK    ++A  +F K+   ++     +P+V TY  +I G CK
Sbjct: 333 EMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCK 392

Query: 345 EEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
             +      L+ERM+ Q   +PNT TY  LI G+CK    E A +L D M K+G  PN+ 
Sbjct: 393 VGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
             N ++DG+CK GR+  A E   +   + L+ + +TYT L+         ++A+ LF  M
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++AG +PD   Y TLI+   +  K+  +     +   AG  P   ++  +I G+ R   +
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A +  + M   G  PD +TY  LIS   K      A +  + M+ +G+ P  VT   L
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632

Query: 584 AYEYCKQGDSATAMIILESLDK--KLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
            + YC  G+   AM I   +    K+   TV  N LI  LC + +V +A      +  K 
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 640 QNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
              +  +  A+     E N  +   +L  R+ E
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 200/431 (46%), Gaps = 9/431 (2%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L +++   C  G  + A +V   +   G   +A+S   ++ A  R       +  L+ M 
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK 332

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM---VRKGW--KPNVYTHTVLIDG 305
           +     +  T  +LI   C   FR  + +A E+ E+M      G+  +P+V T+  LIDG
Sbjct: 333 EMDIQPNVVTFGILINHLCK--FR-RVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LCK G  E+   L  ++       PN  TY  +I GYCK   +  A  L ++M + G+ P
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  T  +L+ G CK G    A +  + M  +G   N   Y A+I   C    +++A EL 
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +  +     D I Y  L+S   +  +  +A  +  +M +AG +PDI ++  LI  FCR+
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K+ E+ +  +E   AG+ P   TY ++I  + + G+ S+A +  ++M + G  P  +TY
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629

Query: 546 GALISGLCKQSKLDEACQFYESMIGKG-ISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           GALI   C    LDEA + +  M     + P  V    L    C++     A+ +++ + 
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 605 KKLWIRTVNTL 615
            K      NT 
Sbjct: 690 VKGVKPNTNTF 700



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 213/466 (45%), Gaps = 21/466 (4%)

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC-----RMGRVTE 241
           +T   N ++ +    G V+ A  + DEM         +S    +V        ++GR  +
Sbjct: 191 LTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVD 250

Query: 242 ADR---WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
            +     +S   +     ++  LT LI+  C  G      +A+++L  +++ G      +
Sbjct: 251 EEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSG---RTDRAWDVLHGLMKLGGVMEAAS 307

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
              L+  L +    ++   L  ++   D  +PNV T+  +I+  CK  +++ A  + E+M
Sbjct: 308 CNALLTALGRAREFKRMNTLLAEMKEMD-IQPNVVTFGILINHLCKFRRVDEALEVFEKM 366

Query: 359 ---KEQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEGCTPNIYAYNAIIDGL 412
              +  G L  P+  TY +LI G CKVG  E    L++ M  +  C PN   YN +IDG 
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK   ++ A EL  +  +  +  + +T   L+    K      A+  F  M   GL  + 
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YT LI AFC    ++++ + F E + AG  P    Y ++I G  + G +  A     +
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M + G +PD +++  LI+G C+++KLDEA +  + M   GI P  VT  TL   + K GD
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 593 SATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
            +TA  +++ + K+  + TV T   LI   C    +  A   F  +
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 8/337 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  + +   ++    +  +M  +G+P    TLN +V   C+ G +  A E F+EM  
Sbjct: 420 NCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQG 479

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  +A +Y  ++ A+C +  + +A      ML+ G   D      LI+        G 
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA---GK 536

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  +L +M   G+ P++ +  VLI+G C+K   ++A+ + LK + +   KP+  TY 
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM-LKEMENAGIKPDGVTYN 595

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGK 395
            +IS + K    + A  L+++M ++GL+P   TY +LI+ +C  GN + A  +  D+   
Sbjct: 596 TLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSST 655

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               PN   YN +I+ LC+K +V  A  L+     + ++ +  T+  +     ++    +
Sbjct: 656 SKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSK 715

Query: 456 ALGLFCRMVKAGLNPD---IHAYTTLIAAFCRQKKMK 489
           A  L  RM +   NPD   +   T  ++A     K+K
Sbjct: 716 AFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLK 752



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 132/289 (45%), Gaps = 5/289 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V    + GR+        EM   GL     T   ++   C +  +E A E+FDEM 
Sbjct: 454 LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   DA  Y  ++    + G++  A   LS M + G   D  +  +LI  FC K    
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK---N 570

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A+E+L+EM   G KP+  T+  LI    K G    A RL  K+V+ +   P V TY
Sbjct: 571 KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK-EGLVPTVVTY 629

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
            A+I  YC    ++ A  +   M     + PNT  Y  LI   C+    + A  LMD M 
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            +G  PN   +NA+  GL +K  + +A+EL+ +  +     D IT  IL
Sbjct: 690 VKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 152/365 (41%), Gaps = 70/365 (19%)

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRA---- 351
           +   +LID L +KG  + A  L  ++++    + PN +T   + S   K +K+ RA    
Sbjct: 193 HIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEE 252

Query: 352 EM--LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           E+  L+ +  E  + PN+   T LI   C+ G  +RA+D++  + K G      + NA++
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL 312

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             L +    +    LL +  + ++Q + +T+ IL++   K     +AL +F +M      
Sbjct: 313 TALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGG--- 369

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
                               ES  F  E       P   TY ++I G  + G     +  
Sbjct: 370 --------------------ESNGFLVE-------PDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 530 FQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +RM +Q  C P+ +TY  LI G CK S ++ A + ++ M   G+ P  VT         
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVT--------- 453

Query: 589 KQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
                                  +NTL+  +C   R+  A  FF+++ GK    + V+  
Sbjct: 454 -----------------------LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 649 ALKNA 653
           AL  A
Sbjct: 491 ALIRA 495


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 245/517 (47%), Gaps = 28/517 (5%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIV-CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           ++F  +   F  F+    ++++ C TS  S  N    +  +  +VSSF  +   K     
Sbjct: 9   VAFSVFITNFPNFQFLNPIFLIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPS 68

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           +I+              +++G   +         +  +M   G+ ++  +  +++  + +
Sbjct: 69  IIQ------------FGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQ 116

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           +G  + +    S +L +G   D  TLT LI   C    +G I +A    ++++  G++ N
Sbjct: 117 LGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC---LKGDIHKALHFHDKVLALGFQLN 173

Query: 296 VYTHTVLIDGLCKKGWTEKAF----RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             ++  LI+GLCK G T+ A     R+  KLVR D     V  Y  +I G CK++ +N A
Sbjct: 174 QVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLD-----VVMYNTIIDGVCKDKLVNDA 228

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
                 M  + + P   TY +LI G C +G  + A  L+  M  E   P +Y ++ ++D 
Sbjct: 229 FDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDA 288

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK+G+V+EA  +     +++++ + +TY  L++ +    E  +A  +F  M + G+ PD
Sbjct: 289 FCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPD 348

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +H+Y+ +I+ FC+ K + E+ K F+E     +FP   TY S+I G  + G IS A+K   
Sbjct: 349 VHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIG 408

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M+  G  P+ ITY +L+  LCK   +D+A +    +    I P   T   L    CK G
Sbjct: 409 EMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSG 468

Query: 592 DSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRV 625
               A  + E +      + + T NT+I+  C +  V
Sbjct: 469 RLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 32/262 (12%)

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           L+ ++  TP+I  +  I+  L K         L ++     + ++ +T +IL++   +  
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               +  +F  ++K G  PD    TTLI   C +  + ++  F  + +  G    + +Y 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G  + G   +A++  +R++      D + Y  +I G+CK   +++A  FY  M+ K
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
            I P  VT                                 NTLI  LC   ++  A   
Sbjct: 239 RICPTVVTY--------------------------------NTLICGLCIMGQLKDAIGL 266

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
            HK++ ++ N    + + L +A
Sbjct: 267 LHKMILENINPTVYTFSILVDA 288



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S F +I  + E   +  EM    +     T N ++   C+ G + YA ++  EM  RG
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++ A C+   V +A   L+ + D        T  +LI   C  G    +K
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSG---RLK 471

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
            A ++ E+++  G+  +VYT+  +I G CKKG+    F
Sbjct: 472 DAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 195/361 (54%), Gaps = 4/361 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +++  +C +G++  +   L  +L  G   D  TL  L+   C   
Sbjct: 90  QMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLC--- 146

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G +K++    +++V +G++ N  ++  L++GLCK G T  A +L L+++   + +P+V
Sbjct: 147 LKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL-LRMIEDRSTRPDV 205

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y+ +I G CK++ +N+A      M  +G+ PN  TY++LI+G C  G    A+ L++ 
Sbjct: 206 VMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNE 265

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +   PN+Y YN +ID LCK+G+V+EA +LL +   +   AD +TY  +L    K   
Sbjct: 266 MILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQN 325

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF +M K G+ P+ + YT LI   C+  ++K ++K FQ  +  G      TY  
Sbjct: 326 LDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNV 385

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           MI G  ++G    A+    +M   GC P+ +T+  +I  L ++ + D+A +    MI KG
Sbjct: 386 MISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445

Query: 573 I 573
           +
Sbjct: 446 L 446



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 4/321 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            TL +LI  FC     G +  +F +L ++++ G++P+  T   L+ GLC KG  +++   
Sbjct: 101 VTLNILINCFCH---LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHF 157

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             K+V +  ++ N  +Y  +++G CK  +   A  LL  ++++   P+   Y+++I G C
Sbjct: 158 HDKVV-AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K     +AYD    M   G  PN+  Y+ +I G C  G++  A+ LL +   + +  +  
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL+    K+ + K+A  L   M   G   D+  Y +++   C+ + + ++   F + 
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P K TYT++I G  + G + +A K FQ +   GC  D  TY  +ISGLCK+   
Sbjct: 337 KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMF 396

Query: 559 DEACQFYESMIGKGISPCEVT 579
           D+A      M   G  P  VT
Sbjct: 397 DKALAMKSKMEDNGCIPNAVT 417



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 4/349 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++   FS++ ++   G    T TLN ++   C  G V+ +    D++ 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   +  SY  ++   C++G    A + L  + DR    D    + +I   C      
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKI-- 220

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + QA++   EM  +G  PNV T++ LI G C  G    AF L  +++   N  PNV+TY
Sbjct: 221 -VNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILK-NINPNVYTY 278

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CKE K+  A+ LL  M  +G   +  TY S++ G CK  N ++A  L   M K
Sbjct: 279 NILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKK 338

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN Y Y A+IDGLCK GR++ A +L +    +    D  TY +++S   K+    +
Sbjct: 339 WGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDK 398

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           AL +  +M   G  P+   +  +I +   + +  ++EK     I  GL 
Sbjct: 399 ALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 3/297 (1%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +PN+ T   +I+ +C   +M  +  +L ++ + G  P+T T  +L+ G C  G  +R+  
Sbjct: 97  EPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH 156

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
             D +  +G   N  +Y  +++GLCK G  + A +LL+    R  + D + Y+ ++    
Sbjct: 157 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K     QA   F  M   G+ P++  Y+TLI  FC   ++  +     E I   + P   
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY  +I    ++G +  A K    M+  G   D +TY +++ GLCK   LD+A   +  M
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
              GI P + T   L    CK G    A  + + L  K   + +RT N +I  LC E
Sbjct: 337 KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKE 393



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 148/330 (44%), Gaps = 12/330 (3%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L LVR   + P +  +  ++    K +    A  L  +M+ +G+ PN  T   LI   C 
Sbjct: 56  LLLVR---HTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +G    ++ ++  + K G  P+    N ++ GLC KG V+ +     K   +  Q ++++
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  LL+   K  ET+ A+ L   +      PD+  Y+T+I   C+ K + ++  FF E  
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMN 232

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+FP   TY+++I G+   G +  A      M      P+  TY  LI  LCK+ K+ 
Sbjct: 233 ARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVK 292

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLWIR----TVN 613
           EA +    M  KG     VT  ++    CK    D ATA+ +     KK  I+    T  
Sbjct: 293 EAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM---KKWGIQPNKYTYT 349

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            LI  LC   R+  A   F  LL K   +D
Sbjct: 350 ALIDGLCKGGRLKNAQKLFQHLLVKGCCID 379



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 97/219 (44%), Gaps = 4/219 (1%)

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F R++     P I  +  ++    + K    +    ++    G+ P   T   +I  +  
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ +     ++ ++G  PD IT   L+ GLC + ++  +  F++ ++ +G    +V+
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
             TL    CK G++  A+ +L  ++ +     V   +T+I  LC +K V  A  FF ++ 
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMN 232

Query: 637 GKDQNVDRVSLAALK-NACYESNKYALFSDLSQRIAEGI 674
            +    + ++ + L    C        FS L++ I + I
Sbjct: 233 ARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNI 271



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +   V  F R+  +   P  I +G ++  L K      A      M  KGI P  VT   
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   +C  G  A +  +L  + K  +     T+NTL++ LC +  V  +  F  K++ + 
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 640 QNVDRVSLAALKNA 653
             +++VS   L N 
Sbjct: 166 FQMNQVSYGTLLNG 179


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 209/398 (52%), Gaps = 4/398 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M ++G+ +   +   VV   C+ G V  A+ + DE+  +G      +Y  ++  Y  + 
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            V   +  LS M       +  T T+LI  +        I++A +L +EM++KG +P+VY
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSS---KIEEAEKLFDEMLKKGIEPDVY 298

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            +T +I+  CK G  ++AF LF ++       PN +TY A+I+G CK  +M  AEM++  
Sbjct: 299 IYTSIINWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVND 357

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+ +G+  N   + +L+ G+CK G  + A  L ++M ++G   + +  N I  G C+  R
Sbjct: 358 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 417

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            +EA  LL    +R +  + ++++IL+  + K+    +A  LF  M K G  P +  Y  
Sbjct: 418 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 477

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            I  +C++ KM+E+ K   E    GL P   TYTS+I G    GN+  A++ F  M Q+G
Sbjct: 478 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 537

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              + +TY  +ISGL K  + DEA + Y+ M  +GI P
Sbjct: 538 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 575



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 4/325 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E AE++FDEM  +G+  D   Y  ++   C+ G +  A      M +R  + +  T   
Sbjct: 278 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 337

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C  G    +K A  ++ +M  KG   N      L+DG CKKG  ++A RL   ++
Sbjct: 338 LINGACKAG---EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIM 393

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +   ++ +  T   + SG+C+  +   A+ LL  M+E+G+ PN  +++ LI  +CK  NF
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  L  +M K+G  P++  YNA I+  CKKG+++EAY+L+ +  +R L  D  TYT L
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 513

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +          +AL LF  M + GLN ++  YT +I+   +  +  E+ K + E    G+
Sbjct: 514 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 573

Query: 504 FPTKETYTSMICGYLRDGNISSAVK 528
            P    Y+S+I    + G + S ++
Sbjct: 574 VPDDGIYSSLIASLHKVGPLVSGLE 598



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R GN+   V++ ++M   G      ++ A++ GLCK+ ++  A    + ++ KG  P  +
Sbjct: 169 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 228

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
           T  TL   Y +  D      IL  ++K +    V T   LI       ++  A   F ++
Sbjct: 229 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 288

Query: 636 LGKDQNVDRVSLAALKN-ACYESN---KYALFSDLSQR 669
           L K    D     ++ N  C   N    + LF ++++R
Sbjct: 289 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 326


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 208/390 (53%), Gaps = 8/390 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + V+   C+ G V+ A  + + M  RG C D +++ +++   C+  ++ EA  +L  M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 250 LDRGAILDNATLTL--LITAFCDKGFRGSIKQAFELLEEMV-RKGWKPNVYTHTVLIDGL 306
               +   ++  +   L+ + C       + QAF +   MV  +   P+V ++++LIDG 
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAK---KVHQAFAIFSTMVSERSVVPDVVSYSILIDGF 167

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK     +A +L+ +++   N  PNV TY A ++G  ++ ++  A+ + E M   G  P+
Sbjct: 168 CKIDELGRAEKLYKQMIDL-NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY++LI+G       ++A++L + M   GC PN   YN ++ GLCK+ +  EA+EL +
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K  +R    DK+TYT LL       + +QA+ +F  MV  G +PD+ AY  L+  F R  
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI-GCAPDNITY 545
           K  E+ + FQ  ++    P   ++  MI G  +   +  AV+ F+RM Q  GC+PD +TY
Sbjct: 347 KPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 406

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISP 575
            +LI GLC + +L EA + ++ +    +SP
Sbjct: 407 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR--KG 291
           C+ GRV  A   L  M+ RG   D AT ++LI   C       I++A E L+ M R    
Sbjct: 60  CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD---KIQEAQEFLQGMNRTIST 116

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
              + +++  L++ LCK     +AF +F  +V   +  P+V +Y+ +I G+CK +++ RA
Sbjct: 117 RASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRA 176

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           E L ++M +   +PN  TY + + G  + G    A  + + M   GC+P++  Y+ +I G
Sbjct: 177 EKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHG 236

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
                +  +A+EL +    R  + + +TY  LL    K+++  +A  LF +MV+ G +PD
Sbjct: 237 FSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              YTTL+  FC   K++++ + F E ++ G  P    Y  ++ G+ R G    A + FQ
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM-IGKGISPCEVTRVTLAYEYCKQ 590
            M    C PD +++  +I GL K  +LD+A + +E M    G SP  VT  +L +  C +
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 591 GDSATAMIILESLDK 605
              + AM + + +D+
Sbjct: 417 QRLSEAMKVFKEIDR 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 178/355 (50%), Gaps = 8/355 (2%)

Query: 300 TVLIDGLCKKGWTEKAFRL--FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T  + GLCK G  E+AF     ++   S +  P+  T  ++I   CK  +++ A  LLE 
Sbjct: 15  TAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLET 74

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT--PNIYAYNAIIDGLCKK 415
           M ++G  P+  T++ LI   CK    + A + +  M +   T   + ++YN++++ LCK 
Sbjct: 75  MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKA 134

Query: 416 GRVQEAYELLKKAF-QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            +V +A+ +      +R +  D ++Y+IL+    K  E  +A  L+ +M+     P++  
Sbjct: 135 KKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 194

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y   +    R+ ++ +++  ++E I+AG  P   TY+++I G+        A + F+ M 
Sbjct: 195 YNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMI 254

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC P+ +TY  L+ GLCK+SK DEA + +  M+ +G  P +VT  TL Y +C  G   
Sbjct: 255 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIE 314

Query: 595 TAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            A+ + + +  K     V   N L++      + G A   F  ++ ++   D VS
Sbjct: 315 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 146/323 (45%), Gaps = 40/323 (12%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT---NTYTSLIYGHCKVGNFERAYDLMD 391
           +TA + G CK  K+ +A      M+E           T  S+I   CK G  + A  L++
Sbjct: 14  WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLE 73

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ---ADKITYTILLSEHL 448
            M K G  P++  ++ +I+ LCK  ++QEA E L+    R +    +   +Y  LL+   
Sbjct: 74  TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQ-GMNRTISTRASSCFSYNSLLNSLC 132

Query: 449 KQAETKQALGLFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           K  +  QA  +F  MV +  + PD+ +Y+ LI  FC+  ++  +EK +++ I     P  
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY + + G +R G I+ A   ++ M   GC+PD ITY  LI G     K D+A + +E+
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           MI +G  P  VT                                 N L+  LC E +   
Sbjct: 253 MISRGCRPNAVT--------------------------------YNCLLHGLCKESKPDE 280

Query: 628 AALFFHKLLGKDQNVDRVSLAAL 650
           A   F K++ +  + D+V+   L
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTL 303



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 8/281 (2%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           E+GR ++ +  +I++  N +P +T T N  +      G +  A+ V++EM + G   D  
Sbjct: 172 ELGRAEKLYKQMIDL--NCVPNVT-TYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++  +    +  +A     AM+ RG   +  T   L+   C +       +A EL 
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE---SKPDEAHELF 285

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +MV +G  P+  T+T L+ G C  G  E+A  +F ++V S  + P+V  Y  ++ G+ +
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMV-SKGHDPDVVAYNCLLKGFFR 344

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIY 403
             K   A  L + M  +   P+T ++  +I G  K    + A ++ + M ++ GC+P++ 
Sbjct: 345 AGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 404

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            YN++I GLC + R+ EA ++ K+  + +L  D   + +LL
Sbjct: 405 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A E+F+ M +RG   +A +Y  ++   C+  +  EA      M++RG   D  T T L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  FC+ G    I+QA E+ +EMV KG  P+V  +  L+ G  + G   +A +LF  +V 
Sbjct: 304 LYGFCNVG---KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV- 359

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM-KEQGLLPNTNTYTSLIYGHCKVGNF 383
           S   KP+  ++  MI G  K ++++ A  + ERM ++ G  P+  TY SLI+G C     
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             A  +   + +   +P+ +A+N +++ +   G
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 3/216 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F+   +  +   +   M + G      T N ++   C+    + A E+F +M  RG
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +C +G++ +A      M+ +G   D      L+  F   G  G  +
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q F++   MV +  KP+  +H ++IDGL K    + A  +F ++ +     P++ TY ++
Sbjct: 353 QLFQV---MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           I G C E++++ A  + + +    L P+ + +  L+
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 206/419 (49%), Gaps = 13/419 (3%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +T N V     + G +E  +EV+  M   G    AS Y +++   C++G   EA + L  
Sbjct: 11  ATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHT 70

Query: 249 M----LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           M      R AI      + +I   C       +++A EL+E+M R    P+  T+  +++
Sbjct: 71  MRLKRFKRKAI----AYSTIINWLCK---LNRVEEARELIEKMARYA-PPDALTYGPIVE 122

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            LCK    + A     ++  +   KP+   Y  ++SG C+EEK+  A +L E+M +Q + 
Sbjct: 123 RLCKTKRIDDALATVEEMA-TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY +LI G CK    E AY+L   M  +G  P   +YN +IDG CKK  +  A ++
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             K  +     + +TYT L+    K  + + A  +   MVK G+ P++  Y+ LI  FC+
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            +++ E+ K  ++ +T G+ PT  TY  ++    R   +  A K F+ M Q  C P  +T
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           Y  L+  LC   +LD A + Y  MI KG  P  +T  TLA+   + G    A  ++E +
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 5/410 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +   FA+ GRL++   +   M   G  L  S    ++   C++G  + A ++   M  + 
Sbjct: 16  VADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKR 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A +Y  ++   C++ RV EA R L   + R A  D  T   ++   C       I 
Sbjct: 76  FKRKAIAYSTIINWLCKLNRVEEA-RELIEKMARYAPPDALTYGPIVERLCKT---KRID 131

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   +EEM  +G KP+ + +  ++ GLC++   E+A  LF K+V+     PNV TY  +
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ-RINPNVVTYNTL 190

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  ++  A  L + M  +G +P   +Y +LI G CK  +   A D+ D M +  C
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y  +IDGL K G+VQ A E+L    ++ +  +  TY+ L+    K     +A  
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +MV  G+ P +  Y  L+ + CR  K++++ K F+        PT  TY +++    
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               +  A + +  M   GC PD ITY  L  GL +  K+ EA +  E M
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 186/379 (49%), Gaps = 5/379 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G ++Q  E+ + MV  G+      + +LI  LCK G  ++A++L L  +R   +K     
Sbjct: 24  GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL-LHTMRLKRFKRKAIA 82

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I+  CK  ++  A  L+E+M      P+  TY  ++   CK    + A   ++ M 
Sbjct: 83  YSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDALATVEEMA 141

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  P+ + YN ++ GLC++ +V+EA  L +K  ++ +  + +TY  L++   K    +
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  LF  M   G  P   +Y TLI  FC++K +  ++  F + + +   P   TYT++I
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  + G + +A +    M + G  P+  TY  LI G CK  ++DEA +  E M+ +GI+
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKL---WIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT   L    C+      A  +   + ++     + T NTL+R LC  K++  A   
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           + +++ K    D ++   L
Sbjct: 382 YAEMIAKGCPPDAITYDTL 400



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 4/312 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R+ +  + V EM   G+       N V+   C+   VE A  +F++M  + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+  R+  A      M  +G +    +   LI  FC K     + 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK---DLV 236

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ ++MVR    PNV T+T LIDGL K G  + A  +   +V+     PNV TY+ +
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCL 295

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK  +++ A  LLE+M  QG+ P   TY  L+   C+    E A+ L   M +  C
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YN ++  LC   ++  A+ L  +   +    D ITY  L     +  +  +A  
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415

Query: 459 LFCRMVKAGLNP 470
           L  +M     NP
Sbjct: 416 LMEKMKLTKRNP 427



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 4/279 (1%)

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           ++P   T+ ++  G  K G  E+  ++   M + G T     Y  +I  LCK G   EAY
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +LL     +  +   I Y+ +++   K    ++A  L  +M +    PD   Y  ++   
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERL 124

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+ K++ ++    +E  T G+ P    Y  ++ G  ++  +  A   F++M +    P+ 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY  LI+GLCK  +++ A + ++ M GKG  P EV+  TL   +CK+ D   A  + + 
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 603 LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGK 638
           + +   +  V    TLI  L    +V  AA     ++ K
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 218/483 (45%), Gaps = 62/483 (12%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC--- 199
           +I+ G +  +  +   ++ ++   G     + ++ +M + G        N ++G  C   
Sbjct: 360 MITEGCYP-SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418

Query: 200 ---ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
               L ++E AE+ + EM    V  +  +   +    C  G+  +A   +  M+ +G I 
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D +T + +I   C+      +  AF L EEM      P+V+T+T+LID  CK G  ++A 
Sbjct: 479 DTSTYSKVIGLLCNAS---KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           + F ++VR D   PNV TYTA+I  Y K  KM+ A  L E M  +G +PN  TYT+LI G
Sbjct: 536 KWFDEMVR-DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 377 HCKVGNFERA-------------------------------------------------- 386
           HCK G  E+A                                                  
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 387 -YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
             DL+D+M  EGC PN   Y+A+IDG CK G++ EA  +  K  +R    +  TY+ L+ 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K      AL +  RM++    P++  YT +I   C+  K  E+ +        G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT+MI G+ + G +   ++  ++M   GCAP+ +TY  LI+  C    LD+A Q  
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 566 ESM 568
           + M
Sbjct: 835 DEM 837



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 219/514 (42%), Gaps = 68/514 (13%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV  L+      + + FF WA     + H   +Y      L   GN              
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGN-------------- 177

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
                R+ E F  + E+ +    ++   LN ++   C  GL   A E    +   G    
Sbjct: 178 ----DRVPEQF--LREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPS 231

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  +V  +    R+  A      M D G  +D  TL   +   C  G     ++A  
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALA 288

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L+E   ++ +K +   +T +I GLC+    E+A   FL  +RS +  PNV TY  ++ G 
Sbjct: 289 LIE---KEEFKLDTVIYTQMISGLCEASLFEEAMD-FLSRMRSSSCIPNVVTYRILLCGC 344

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            ++ ++ R + +L  M  +G  P+   + SLI+ +C+ G++  AY L+  MG  GC P  
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGY 404

Query: 403 YAYNAIIDG-----------------------------------------LCKKGRVQEA 421
             YN +I G                                         LC  G+ ++A
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y ++++   +    D  TY+ ++      ++   A  LF  M    + PD+  YT LI +
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC+   ++++ K+F E +  G  P   TYT++I  YL+   +SSA + F+ M   GC P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +TY ALI G CK  ++++ACQ Y  M G    P
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 32/503 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F E  RL   + +  EM+++G  +   TL   V + C+ G    A  + ++   + 
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK- 296

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  M+   C      EA  +LS M     I +  T  +L+     K   G  K
Sbjct: 297 --LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCK 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   +L  M+ +G  P+      LI   C+ G    A++L LK +     +P    Y  +
Sbjct: 355 R---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL-LKKMGDCGCQPGYVVYNIL 410

Query: 339 ISGYCKEEKM------NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           I G C  EK+        AE     M +  ++ N    ++L    C  G FE+AY ++  
Sbjct: 411 IGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIRE 470

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  P+   Y+ +I  LC   +V  A+ L ++     +  D  TYTIL+    K   
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            +QA   F  MV+ G  P++  YT LI A+ + +KM  + + F+  ++ G  P   TYT+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPD----------NI------TYGALISGLCKQS 556
           +I G+ + G I  A + + RM      PD          NI      TYGAL+ GLCK  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           K+ EA    + M  +G  P  +    L   +CK G    A ++   + ++ +   + T +
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 614 TLIRKLCSEKRVGMAALFFHKLL 636
           +LI +L  +KR+ +A     ++L
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 41/338 (12%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V+ A ++ D M   G   +   Y  ++  +C++G++ EA    + M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +RG   +  T + LI    D+ F+   +  A ++L  M+     PNV  +T +IDGLCK
Sbjct: 698 SERGYGPNVYTYSSLI----DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G T++A+RL + ++      PNV TYTAMI G+ K  K+++   L+ +M  +G  PN  
Sbjct: 754 VGKTDEAYRL-MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGK--------------EG----------------- 397
           TY  LI   C  G  + A+ L+D M +              EG                 
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872

Query: 398 --CTPNIYAYNAIIDGLCKKGRVQEAYELLKK--AFQRELQADKITYTILLSEHLKQAET 453
               P I AY  +ID  CK GR++ A EL K+  +      ADK  Y+ L+      ++ 
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +A  L+  M+K G  P++  +  L+    R  + +E+
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 12/335 (3%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++    FL+ +R ++ +        +I   C+    N A   L R+K+ G  P+  T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +L+    +    + AY +   M   G   + Y     +  LCK GR +EA  L++K  
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-- 292

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
             E + D + YT ++S   + +  ++A+    RM  +   P++  Y  L+    R++++ 
Sbjct: 293 -EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
             ++     IT G +P++  + S+I  Y R G+ S A K  ++M   GC P  + Y  LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 550 SGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G+C   K      L+ A + Y  M+   +   +V    LA   C  G    A  I+  +
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 604 DKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             K +I   +T   +I  LC+  +V  A L F ++
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 43/312 (13%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           E  H V   ++  F ++G+L E   +  +M+  G      T + ++    +   ++ A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M       +   Y  M+   C++G+  EA R +S M ++G   +  T T +I  F 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF- 786

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL----------- 318
             G  G + +  EL+ +M  KG  PN  T+ VLI+  C  G  + A +L           
Sbjct: 787 --GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK 844

Query: 319 ----FLKLVRSDNYK-----------------PNVHTYTAMISGYCKEEKMNRAEMLLER 357
               + K++   N +                 P +  Y  +I  +CK     R E+ LE 
Sbjct: 845 HMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA---GRLELALEL 901

Query: 358 MKEQGLL-----PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            KE          + + Y+SLI         ++A++L   M K G  P +  +  ++ GL
Sbjct: 902 HKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961

Query: 413 CKKGRVQEAYEL 424
            +  R +EA +L
Sbjct: 962 IRINRWEEALQL 973


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 234/470 (49%), Gaps = 11/470 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +V  +    GV  + +S+ +++  YC   +V +A  W++ M + G + D  +   ++ 
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A      R  +++A +LL +M  KG  PN +T+ +L+ G C+ G  ++A ++ ++++  +
Sbjct: 257 ALLK---RRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV-IEIMTRN 312

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P V TY  +++G+C + K++ A  + + M++  +LP+  TY +LI G  +  +    
Sbjct: 313 NLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEV 372

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y L++ M K+G   N   YN I+  +CKKG + EA   L K  +  L  D +TY  L+  
Sbjct: 373 YSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGA 432

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K  +  +A  +   M   GL  D     T++   C +KK+ E+      A   G    
Sbjct: 433 YCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILD 492

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           + +Y  +I GY +D     A+  +  M +    P  ITY ++I GLC+  K+D+A     
Sbjct: 493 EVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLN 552

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
            M+  G+ P E T   + + +C +G+   A      + + L+   + T N L+R LC E 
Sbjct: 553 EMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREG 612

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---SNKYALFSDLSQR 669
            +  A   F+ L+ K +++D V+   + ++ C E    N Y L +++  +
Sbjct: 613 MLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAK 662



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 241/491 (49%), Gaps = 19/491 (3%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
            ++K+    V +M+  G    T + N ++    +  L++ A ++  +M ++G+  +  +Y
Sbjct: 227 SKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTY 286

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            ++V  YCR+G + EA + +  M     +    T  +L+  FC+ G    I +AF + +E
Sbjct: 287 NMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG---KIDEAFRIRDE 343

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +    P+V T+  LIDG  +   + + + L  ++ +    K N  TY  ++   CK+ 
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKK-GVKCNAVTYNIILKWMCKKG 402

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M  A   L++M+E GL P+  TY +LI  +CK G   +A+ +MD M  +G   + +  N
Sbjct: 403 NMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLN 462

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            I+  LC + ++ EAY LL  A +R    D+++Y IL+  + K  +  +AL L+  M + 
Sbjct: 463 TILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKER 522

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P    Y ++I   C+ +K+ ++     E +  GL P + TY  +I G+  +GN+  A
Sbjct: 523 QIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKA 582

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            ++   M +    PD  T   L+ GLC++  L++A + + +++ KG     VT  T+   
Sbjct: 583 FQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISS 642

Query: 587 YCKQGDSATAMIILESLD-KKLWIR--TVNTLIRKLCSEKRVGMAALFFHKL-------- 635
            CK+G    A  +L  ++ KKL     T   +I  L    R+  A  F  K+        
Sbjct: 643 LCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702

Query: 636 ----LGKDQNV 642
               LGK QNV
Sbjct: 703 QNLKLGKGQNV 713



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 212/449 (47%), Gaps = 29/449 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTN-NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V+ F   G++ E F +  EM   N LP +  T N ++    +         + +EM  +
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVV-TYNTLIDGCSQWRDSSEVYSLIEEMDKK 382

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  +A +Y +++   C+ G +TEA   L  M + G   D  T   LI A+C  G  G  
Sbjct: 383 GVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG-- 440

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AF +++EM  KG K + +T   ++  LC +   ++A+ L     +   Y  +  +Y  
Sbjct: 441 -KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKR-GYILDEVSYGI 498

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GY K+EK +RA  L + MKE+ ++P+T TY S+I G C+    ++A D ++ M + G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   YN II G C +G V++A++   +  +   + D  T  ILL    ++   ++AL
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  +V  G + D+  Y T+I++ C++ K + +     E     L P + TY  +I   
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 518 LRDGNISSAVKYFQRMNQIGCAPD-----------------------NITYGALISGLCK 554
              G I  A ++  +M + G   D                       +I Y   I+ LC 
Sbjct: 679 TDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCN 738

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTL 583
           Q K  +A   +  +  +G++  + T + L
Sbjct: 739 QHKYKDAMHLFVEVTKEGVALNKYTYLNL 767



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 160/324 (49%), Gaps = 15/324 (4%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISG---YCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           A ++F K+ R  NY+PN+ T   +++    Y     +  A  +L+   + G++PNTN++ 
Sbjct: 159 ATQIFNKMKRL-NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFN 217

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LIYG+C     + A D ++ M + GC P+  +YN I+D L K+  +QEA +LL     +
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  +K TY +L+  + +    K+A  +   M +  L P +  Y  L+  FC   K+ E+
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337

Query: 492 EKFFQEAITAGLFPTKETYTSMI--CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   E     + P   TY ++I  C   RD   S      + M++ G   + +TY  ++
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDS--SEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
             +CK+  + EA    + M   G+SP  VT  TL   YCK G    A  +++ +  K   
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 607 --LWIRTVNTLIRKLCSEKRVGMA 628
              W  T+NT++  LC EK++  A
Sbjct: 456 IDTW--TLNTILHCLCVEKKLDEA 477



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 173/378 (45%), Gaps = 31/378 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E  + + +M  NGL     T N ++G  C+ G +  A  + DEM ++G+  D  + 
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKGFRGSIKQAFELL 284
             ++   C   ++ EA   L +   RG ILD  +  +LI  +   +KG R     A  L 
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR-----ALNLW 516

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM  +   P+  T+  +I GLC+    ++A     +++  +   P+  TY  +I G+C 
Sbjct: 517 DEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE-NGLVPDETTYNIIIHGFCL 575

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E  + +A      M E    P+  T   L+ G C+ G  E+A  L + +  +G   ++  
Sbjct: 576 EGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN II  LCK+G+ + AY+LL +   ++L  D+ TY ++++        K+A     +MV
Sbjct: 636 YNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMV 695

Query: 465 KAGLNPDIH-----------------------AYTTLIAAFCRQKKMKESEKFFQEAITA 501
           ++G+  D +                       AY+  I   C Q K K++   F E    
Sbjct: 696 ESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKE 755

Query: 502 GLFPTKETYTSMICGYLR 519
           G+   K TY +++ G ++
Sbjct: 756 GVALNKYTYLNLMEGLIK 773



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 57/367 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA-- 216
           ++ ++ + G++ + F M+ EMT+ GL + T TLN ++   C   + +  +E ++ +C+  
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLC---VEKKLDEAYNLLCSAS 485

Query: 217 -RGVCADASSYKLMVVAY-----------------------------------CRMGRVT 240
            RG   D  SY ++++ Y                                   C+  +V 
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +A   L+ ML+ G + D  T  ++I  FC     G++++AF+   EM+   +KP+VYT  
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIIIHGFC---LEGNVEKAFQFHNEMIENLFKPDVYTCN 602

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+ GLC++G  EKA +LF  LV S     +V TY  +IS  CKE K   A  LL  M+ 
Sbjct: 603 ILLRGLCREGMLEKALKLFNTLV-SKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEA 661

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           + L P+  TY  +I      G  + A +    M + G          + D   K G+ Q 
Sbjct: 662 KKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI---------VHDQNLKLGKGQ- 711

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
              +L            I Y+  ++E   Q + K A+ LF  + K G+  + + Y  L+ 
Sbjct: 712 --NVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLME 769

Query: 481 AFCRQKK 487
              +++K
Sbjct: 770 GLIKRRK 776


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/617 (25%), Positives = 294/617 (47%), Gaps = 42/617 (6%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSS-PPRLNLQID--IDSLTHEQAITVVASLANEAGSMV 115
             LV+ +C ++         LRS+  P+L  ++   + SL   Q   V A L  +    V
Sbjct: 68  HPLVREICRLI--------ELRSAWNPKLEGELRHLLRSLKPRQ---VCAVLQLQTDERV 116

Query: 116 ALSFFYWAIGFAKFRH-----FMRLYIVCATSL----------ISNGNFERAHEVMQCMV 160
           AL FFYWA    ++RH     +  L I+  T L          ++    ER  E    ++
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVM 176

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            S++  G+L+    ++  M   G+    S  N  + +      ++ A    + M    + 
Sbjct: 177 VSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIE 236

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +  +Y  ++  YC + R+ +A   ++ M  +G   D  +   ++   C +     IK+ 
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEK---RIKEV 293

Query: 281 FELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             L+E+M++     P+  T+   +  L K G  ++A   FL+      ++ +   Y+A++
Sbjct: 294 RLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE-FLREAEERRFRVDKVGYSAIV 352

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
             +C+E +M++A+ ++  M  +G +P+  TYTS+I G C+    ++A  ++  M K GC 
Sbjct: 353 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 412

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN  +Y A+++GLCK G   EA E++  + +     + ITY++L+    ++ ++ +A  L
Sbjct: 413 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDL 472

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+K G  P       LI + C+++K+ E+++F ++ +  G       +T++I G+ +
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             ++ +A+     M      PD +TY  +I  L K+ +++EA +    M+  G+ P  VT
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVT 592

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLLGK 638
             T+ ++YC+ G     + +LE +  +   RT  N +I KLCS   +  A    +KLLGK
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA----YKLLGK 648

Query: 639 DQNVDRVSLAALKNACY 655
              V R +     N C+
Sbjct: 649 ---VLRTASKIDANTCH 662



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 47/382 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V SF   GR+ +   +V EM + G      T   V+   C+   V+ A+++  +M   G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              +  SY  ++   C+ G   EA   ++   +   I +  T ++L+      GFR  G 
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM-----HGFRREGK 465

Query: 277 IKQAFELLEEMVRKGWKP-----------------------------------NVYTHTV 301
             +A +L+ EM++KG+ P                                   NV   T 
Sbjct: 466 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTT 525

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I G C+K   E A  L   +  S N  P+V TYT +I    K+ ++  A  L  +M   
Sbjct: 526 VIHGFCQKDDLEAALSLLDDMYLS-NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           GL+P   TY ++I+ +C++G  E    L++ ++ ++ C     AYN +I+ LC  G +++
Sbjct: 585 GLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQ 641

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           AY+LL K  +   + D  T  +L+  +L +     +  + CRM    L PD+     +  
Sbjct: 642 AYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSK 701

Query: 481 AFCRQKKMKESEKFFQEAITAG 502
               + K +E++K     +  G
Sbjct: 702 KLMLEGKSEEADKLILRFVERG 723


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 224/450 (49%), Gaps = 22/450 (4%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +V+ ++   G   +  ++K+++   C+ G+ T A  +L A+ +     D      LI   
Sbjct: 48  KVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGL 107

Query: 269 CDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SD 326
               F+ G+  QA +L E M      P+++T+  +I GLCK G  EKA  L  +++R   
Sbjct: 108 ----FKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG 163

Query: 327 NYKPNVHTYTAMI-SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              P++ TY  +I +G CK+  +  A  +L+ MK  G  P+  TY S+I+  C  G    
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVE 223

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +++  M    C+P++  +N ++DG CK G +  A E+L++  +  +  D ITYTIL++
Sbjct: 224 AAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 280

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA------- 498
              +  + + A  L   +V+ G  PD+ AYT+L+   C+  +++E+ K  +E        
Sbjct: 281 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILA 340

Query: 499 --ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             ++  + P   TY  ++ G ++DG+IS AV     +   G  PD +TY  LI GLCK +
Sbjct: 341 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---N 613
           ++ EAC   + M   G  P +VT  ++ +  C+ G    A  ++  + +K     V    
Sbjct: 401 RVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 460

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +LI  LC   R+  A +    + G+   +D
Sbjct: 461 SLIDGLCKSDRMDDACVVLDAMRGQGVALD 490



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 215/413 (52%), Gaps = 17/413 (4%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG--AILDNA 259
           G  + A ++F+ M +  V  D  +Y  ++   C+ G + +A   L  M+ RG  +  D  
Sbjct: 111 GNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIV 170

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T   LI A   K   G +++A E+L+ M   G  P+V T+  +I  LC  G   +A    
Sbjct: 171 TYNTLINAGICKD--GDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA---- 224

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            +++++ +  P++ T+  ++ G+CK   + RA  +LE M  + +LP+  TYT L+ G C+
Sbjct: 225 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI- 438
           VG  + A+ L++ + ++G  P++ AY +++DGLCK G ++EA++L+K+   RE+ A+ + 
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 439 --------TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                   TY I+L   +K     +A+ L   +V  G  PD+  Y TLI   C+  +++E
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +     E  + G FP   T  S++ G  R G +  A      M++   AP+ + Y +LI 
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           GLCK  ++D+AC   ++M G+G++  +     L       G  A AM + + +
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 180/404 (44%), Gaps = 32/404 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV------------------SSFAEIGRLKEGFSMVI 177
           Y    + L  +GN E+A E+++ M+                  +   + G ++E   ++ 
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILD 194

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M   G      T N ++   C  G V  A E+   M       D  ++  ++  +C+ G
Sbjct: 195 GMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAG 251

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            +  A   L  M     + D  T T+L+   C  G    ++ AF LLEE+VR+G+ P+V 
Sbjct: 252 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVG---QVQVAFYLLEEIVRQGYIPDVI 308

Query: 298 THTVLIDGLCKKGWTEKAFRL--------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            +T L+DGLCK G  E+A +L         L  + S N  P + TY  ++ G  K+  ++
Sbjct: 309 AYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 368

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A  L+  +  +G +P+  TY +LI G CK      A DL D M   GC PN     +++
Sbjct: 369 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVV 428

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC+ GRV +A+ L+ +  ++    + + YT L+    K      A  +   M   G+ 
Sbjct: 429 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVA 488

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            D  AY  LI +     ++ E+   + E +  G  P   T  ++
Sbjct: 489 LDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 192/398 (48%), Gaps = 19/398 (4%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           + G+K +V+++  L+D L K G   +  +++  L+ S    PN+ T+  +I G CK  + 
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHS-GCSPNLVTFKILIRGNCKAGQA 78

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            RA   L  + E  + P+   +  LI+G  K GN ++A  L + M      P+I+ YN +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQA--DKITYTILLSEHL-KQAETKQALGLFCRMVK 465
           I GLCK G +++A ELL++  +R  ++  D +TY  L++  + K  + ++AL +   M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           AG  PD+  Y ++I A C   ++ E+ +  +   T    P   T+ +++ G+ + G +  
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILK---TMSCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A++  + M +    PD ITY  L++GLC+  ++  A    E ++ +G  P  +   +L  
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 315

Query: 586 EYCKQGDSATAMIILESLDKKLWIR------------TVNTLIRKLCSEKRVGMAALFFH 633
             CK G+   A  +++ +  +  +             T N ++  L  +  +  A     
Sbjct: 316 GLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 375

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
            L+ +    D V+   L +   ++N+     DL+  +A
Sbjct: 376 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           ++ G   + ++Y  L+    K G+  R   +   +   GC+PN+  +  +I G CK G+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A E L+   +  +  D   +  L+    K     QA+ LF  M  + +NPDI  Y T+
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 479 IAAFCRQKKMKESEKFFQEAITAG--LFPTKETYTSMI-CGYLRDGNISSAVKYFQRMNQ 535
           I+  C+   ++++ +  +E I  G    P   TY ++I  G  +DG++  A++    M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G APD ITY ++I  LC   ++ EA +  ++M     SP  VT  TL   +CK G    
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 596 AMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
           A+ +LE + ++  +  V T   L+  LC   RVG   + F+ L
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLC---RVGQVQVAFYLL 295


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 218/483 (45%), Gaps = 62/483 (12%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC--- 199
           +I+ G +  +  +   ++ ++   G     + ++ +M + G        N ++G  C   
Sbjct: 360 MITEGCYP-SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418

Query: 200 ---ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
               L ++E AE+ + EM    V  +  +   +    C  G+  +A   +  M+ +G I 
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D +T + +I   C+      +  AF L EEM      P+V+T+T+LID  CK G  ++A 
Sbjct: 479 DTSTYSKVIGLLCNAS---KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           + F ++VR D   PNV TYTA+I  Y K  KM+ A  L E M  +G +PN  TYT+LI G
Sbjct: 536 KWFDEMVR-DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 377 HCKVGNFERA-------------------------------------------------- 386
           HCK G  E+A                                                  
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 387 -YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
             DL+D+M  EGC PN   Y+A+IDG CK G++ EA  +  K  +R    +  TY+ L+ 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K      AL +  RM++    P++  YT +I   C+  K  E+ +        G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT+MI G+ + G +   ++  ++M   GCAP+ +TY  LI+  C    LD+A Q  
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 566 ESM 568
           + M
Sbjct: 835 DEM 837



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 219/514 (42%), Gaps = 68/514 (13%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV  L+      + + FF WA     + H   +Y      L   GN              
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGN-------------- 177

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
                R+ E F  + E+ +    ++   LN ++   C  GL   A E    +   G    
Sbjct: 178 ----DRVPEQF--LREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPS 231

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  +V  +    R+  A      M D G  +D  TL   +   C  G     ++A  
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALA 288

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L+E   ++ +K +   +T +I GLC+    E+A   FL  +RS +  PNV TY  ++ G 
Sbjct: 289 LIE---KEEFKLDTVIYTQMISGLCEASLFEEAMD-FLSRMRSSSCIPNVVTYRILLCGC 344

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            ++ ++ R + +L  M  +G  P+   + SLI+ +C+ G++  AY L+  MG  GC P  
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGY 404

Query: 403 YAYNAIIDG-----------------------------------------LCKKGRVQEA 421
             YN +I G                                         LC  G+ ++A
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y ++++   +    D  TY+ ++      ++   A  LF  M    + PD+  YT LI +
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC+   ++++ K+F E +  G  P   TYT++I  YL+   +SSA + F+ M   GC P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +TY ALI G CK  ++++ACQ Y  M G    P
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 32/503 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F E  RL   + +  EM+++G  +   TL   V + C+ G    A  + ++   + 
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK- 296

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  M+   C      EA  +LS M     I +  T  +L+     K   G  K
Sbjct: 297 --LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCK 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   +L  M+ +G  P+      LI   C+ G    A++L LK +     +P    Y  +
Sbjct: 355 R---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL-LKKMGDCGCQPGYVVYNIL 410

Query: 339 ISGYCKEEKM------NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           I G C  EK+        AE     M +  ++ N    ++L    C  G FE+AY ++  
Sbjct: 411 IGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIRE 470

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  P+   Y+ +I  LC   +V  A+ L ++     +  D  TYTIL+    K   
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            +QA   F  MV+ G  P++  YT LI A+ + +KM  + + F+  ++ G  P   TYT+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPD----------NI------TYGALISGLCKQS 556
           +I G+ + G I  A + + RM      PD          NI      TYGAL+ GLCK  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           K+ EA    + M  +G  P  +    L   +CK G    A ++   + ++ +   + T +
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 614 TLIRKLCSEKRVGMAALFFHKLL 636
           +LI +L  +KR+ +A     ++L
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 53/376 (14%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V+ A ++ D M   G   +   Y  ++  +C++G++ EA    + M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +RG   +  T + LI    D+ F+   +  A ++L  M+     PNV  +T +IDGLCK
Sbjct: 698 SERGYGPNVYTYSSLI----DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G T++A+RL + ++      PNV TYTAMI G+ K  K+++   L+ +M  +G  PN  
Sbjct: 754 VGKTDEAYRL-MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGK--------------EG----------------- 397
           TY  LI   C  G  + A+ L+D M +              EG                 
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872

Query: 398 --CTPNIYAYNAIIDGLCKKGRVQEAYELLKK--AFQRELQADKITYTILLSEHLKQAET 453
               P I AY  +ID  CK GR++ A EL K+  +      ADK  Y+ L+      ++ 
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  L+  M+K G  P++  +  L+    R  + +E+ +              +    M
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL------------SDCICQM 980

Query: 514 ICGYLRDGNISSAVKY 529
           +  ++R+G + S+  Y
Sbjct: 981 MVDFVREGFLGSSHDY 996



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 12/335 (3%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++    FL+ +R ++ +        +I   C+    N A   L R+K+ G  P+  T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +L+    +    + AY +   M   G   + Y     +  LCK GR +EA  L++K  
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-- 292

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
             E + D + YT ++S   + +  ++A+    RM  +   P++  Y  L+    R++++ 
Sbjct: 293 -EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
             ++     IT G +P++  + S+I  Y R G+ S A K  ++M   GC P  + Y  LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 550 SGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G+C   K      L+ A + Y  M+   +   +V    LA   C  G    A  I+  +
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 604 DKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             K +I   +T   +I  LC+  +V  A L F ++
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 43/312 (13%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           E  H V   ++  F ++G+L E   +  +M+  G      T + ++    +   ++ A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M       +   Y  M+   C++G+  EA R +S M ++G   +  T T +I  F 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF- 786

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL----------- 318
             G  G + +  EL+ +M  KG  PN  T+ VLI+  C  G  + A +L           
Sbjct: 787 --GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK 844

Query: 319 ----FLKLVRSDNYK-----------------PNVHTYTAMISGYCKEEKMNRAEMLLER 357
               + K++   N +                 P +  Y  +I  +CK     R E+ LE 
Sbjct: 845 HMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA---GRLELALEL 901

Query: 358 MKEQGLL-----PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            KE          + + Y+SLI         ++A++L   M K G  P +  +  ++ GL
Sbjct: 902 HKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961

Query: 413 CKKGRVQEAYEL 424
            +  R +EA +L
Sbjct: 962 IRINRWEEALQL 973


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 209/398 (52%), Gaps = 4/398 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M ++G+ +   +   VV   C+ G V  A+ + DE+  +G      +Y  ++  Y  + 
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            V   +  LS M       +  T T+LI  +        I++A +L +EM++KG +P+VY
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSS---KIEEAEKLFDEMLKKGIEPDVY 294

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            +T +I+  CK G  ++AF LF ++       PN +TY A+I+G CK  +M  AEM++  
Sbjct: 295 IYTSIINWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVND 353

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+ +G+  N   + +L+ G+CK G  + A  L ++M ++G   + +  N I  G C+  R
Sbjct: 354 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 413

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            +EA  LL    +R +  + ++++IL+  + K+    +A  LF  M K G  P +  Y  
Sbjct: 414 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 473

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            I  +C++ KM+E+ K   E    GL P   TYTS+I G    GN+  A++ F  M Q+G
Sbjct: 474 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 533

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              + +TY  +ISGL K  + DEA + Y+ M  +GI P
Sbjct: 534 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 571



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 4/325 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E AE++FDEM  +G+  D   Y  ++   C+ G +  A      M +R  + +  T   
Sbjct: 274 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 333

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C  G    +K A  ++ +M  KG   N      L+DG CKKG  ++A RL   ++
Sbjct: 334 LINGACKAG---EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIM 389

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +   ++ +  T   + SG+C+  +   A+ LL  M+E+G+ PN  +++ LI  +CK  NF
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  L  +M K+G  P++  YNA I+  CKKG+++EAY+L+ +  +R L  D  TYT L
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 509

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +          +AL LF  M + GLN ++  YT +I+   +  +  E+ K + E    G+
Sbjct: 510 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 569

Query: 504 FPTKETYTSMICGYLRDGNISSAVK 528
            P    Y+S+I    + G + S ++
Sbjct: 570 VPDDGIYSSLIASLHKVGPLVSGLE 594



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R GN+   V++ ++M   G      ++ A++ GLCK+ ++  A    + ++ KG  P  +
Sbjct: 165 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 224

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
           T  TL   Y +  D      IL  ++K +    V T   LI       ++  A   F ++
Sbjct: 225 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 284

Query: 636 LGKDQNVDRVSLAALKN-ACYESN---KYALFSDLSQR 669
           L K    D     ++ N  C   N    + LF ++++R
Sbjct: 285 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 322


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 217/433 (50%), Gaps = 12/433 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  D  +  +++ ++C + R+  A   L+ +L  G   DN T   LI   C   
Sbjct: 175 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC--- 231

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A  L ++ + +G++P+V T+  L++GLCK G T  A RL   +V+  N +PNV
Sbjct: 232 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK-NCRPNV 290

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK+ ++  A  L   M  +G+ P+  TY SLI+  C +  ++    L++ 
Sbjct: 291 IAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 350

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      PN+  ++ ++D LCK+G +  A++++    +R ++ D +TYT L+  H  ++E
Sbjct: 351 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 410

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ +F  MV  G  P++ +Y  LI  +C+ ++M ++    ++    GL     TY +
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G    G +  A+  F  M   G  PD +TY  L+  LCK   L EA    +++ G  
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530

Query: 573 ISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           +   ++    +A +  C+ G+   A  +  +L  K     +RT N +I  LC    +  A
Sbjct: 531 LD-ADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589

Query: 629 ALFFHKLLGKDQN 641
              F K+   D+N
Sbjct: 590 NKLFRKM---DEN 599



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 245/556 (44%), Gaps = 12/556 (2%)

Query: 70  LESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSM-VALSFFYWAIGFAK 128
           L S+ +  H+   P  ++    + S+   +  + V SL+ +  S  +    +   I    
Sbjct: 135 LSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS 194

Query: 129 FRHFMRL-YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           F H  RL Y     + +     +  +     ++      G++ E   +  +    G    
Sbjct: 195 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPD 254

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T   ++   C++G    A  +   M  +    +  +Y  ++ + C+  +VTEA    S
Sbjct: 255 VVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFS 314

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+ +G   D  T   LI A C+       K    LL EMV     PNV   + ++D LC
Sbjct: 315 EMITKGISPDIFTYNSLIHALCN---LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 371

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G    A  +   +++    +P+V TYTA++ G+C   +M+ A  + + M  +G +PN 
Sbjct: 372 KEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y  LI G+C++   ++A  L++ M  +G   +   YN +I GLC  GR+Q A  L  +
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D +TY ILL    K     +A+ L   +  + L+ DI  Y   I   CR  +
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++ +   F    + GL P   TY  MI G  + G +  A K F++M++ GC+ D   Y  
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESL-- 603
           +I G  + ++   A Q  + M+ +G S  +V+  TL  E       D +   + L  +  
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFS-ADVSTTTLIVEMLSDDGLDQSFERLRLRGVGE 669

Query: 604 -DKKLWIRTVNTLIRK 618
            D++L +R V  L +K
Sbjct: 670 EDRELHLRGVAVLGKK 685



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 184/397 (46%), Gaps = 8/397 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  P+VYT  +LI+  C       AF +  KL++    +P+  T+  +I
Sbjct: 169 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL-GCQPDNTTFNTLI 227

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++   +G  P+  TY +L+ G CKVGN   A  L+  M ++ C 
Sbjct: 228 RGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR 287

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+ AYN IID LCK  +V EA+ L  +   + +  D  TY  L+       E K    L
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              MV + + P++  ++T++ A C++  +  +       I  G+ P   TYT+++ G+  
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M   GC P+  +Y  LI+G C+  ++D+A    E M  +G+    VT
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +     I  + T   L+  LC    +  A +    + 
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527

Query: 637 GKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
           G + + D  V   A+   C      A   LFS+LS +
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 564


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 240/589 (40%), Gaps = 84/589 (14%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
            A  G      S+   MT  GLP+     N +V   C  G V+ A  V D M   GV  +
Sbjct: 179 IAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG--------FR 274
            ++Y   +V YCR   V EA      M+  G +LD  TL+ L+   C  G        FR
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 275 ------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
                                   G  K+   LL EMV +G   ++ T+T L+D L K+G
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            T++  +  L+   SDN  PN  TYT +I   CK   ++ AE +L  M+E+ + PN  T+
Sbjct: 359 KTDEV-KDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG-----------------LC 413
           +S+I G  K G  ++A +   +M + G  PN+  Y  +IDG                 LC
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 414 ------------------KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
                             + G+++EA  L K A    L  D + YT L+    K  +   
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A      ++   + PD   Y   I   C   K KE++ F  E    GL P + TY +MI 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            + R G  + A+K    M      P+ ITY  L++GL     +++A      M+  G SP
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---------IRTVNTLIRKLCSEKRVG 626
             +T   +  + C Q      +     LD   W         I   NTL++ LC      
Sbjct: 658 SSLTHRRV-LQACSQSRRLDVI-----LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 627 MAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
            A +   ++LG     D ++  AL    C  S+    F+  +Q + + I
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 205/453 (45%), Gaps = 28/453 (6%)

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR----------WLSAMLDRGAI 255
           +A  V  EMC RGV  D  +   ++   CR G+V  A            W+S+       
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSA------ 171

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
               TL+LL  A    GF G    A  + + M  +G   +V  +  L+ G C+ G  + A
Sbjct: 172 ---GTLSLLDIA----GF-GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAA 223

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            R  L +++     PNV TYT  I  YC+ + +  A  L E M   G+L +  T ++L+ 
Sbjct: 224 -RGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G C+ G F  AY L   M K G  PN   Y  +ID L K GR +E   LL +   R +  
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D +TYT L+    KQ +T +        +   L+P+   YT LI A C+   + E+E+  
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            E     + P   T++S+I G+++ G +  A +Y + M + G  P+ +TYG LI G  K 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTVN- 613
              D A + Y  M+ +G+   +    +L     + G    AM +  ++    L +  VN 
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 614 -TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            TLI  L     +  A  F  +L+ ++   D V
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 244/568 (42%), Gaps = 78/568 (13%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEY--------------------------- 206
           +++ EM   G+P    T+N ++   C  G V+                            
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIA 180

Query: 207 -------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                  A  V D M A+G+  D   Y  +V  +CR G+V  A   L  M + G   + A
Sbjct: 181 GFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T T  I  +C  KG    +++AF+L E MVR G   +V T + L+ GLC+ G   +A+ L
Sbjct: 241 TYTPFIVYYCRTKG----VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ +     PN  TY  +I    K  +      LL  M  +G++ +  TYT+L+    
Sbjct: 297 FREMDKV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G  +   D +     +  +PN   Y  +ID LCK   V EA ++L +  ++ +  + +
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF---------------- 482
           T++ +++  +K+    +A      M + G+NP++  Y TLI  F                
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 483 ------------------CRQK-KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                              RQ  K++E+   F++A  +GL      YT++I G  + G++
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A K+ Q +      PD + Y   I+ LC   K  EA  F   M   G+ P + T  T+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C++G++A A+ +L  +     K  + T NTL+  L     V  A    ++++    
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQ 668
           +   ++   +  AC +S +  +  D+ +
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHE 683



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 39/425 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G+++E  ++  + + +GL L       ++    + G +  A +   E+
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  DA  Y + +   C +G+  EA  +L+ M + G   D +T   +I + C KG  
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG-- 603

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
               +A +LL EM     KPN+ T+  L+ GL   G  EKA  L  ++V S  + P    
Sbjct: 604 -ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV-SAGFSPSSLT 661

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++LE M 
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G+ P+T T+ +LI GHCK  + + A+     M  +  +PNI  +N ++ GL   GR+ 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L +  +  L+ + +TY IL + H KQ+   +A+ L+C MV  G  P +  Y  LI
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F++    G+ PT  TY  ++ G+ R  N +   K  + M + G +
Sbjct: 842 SDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901

Query: 540 PDNIT 544
           P   T
Sbjct: 902 PSKGT 906



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 214/476 (44%), Gaps = 11/476 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S A+ GR KE  S++ EM + G+ +   T   ++    + G  +  ++      +  
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ A C+   V EA++ L  M ++    +  T + +I  F     RG + 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK---RGLLD 431

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E    M  +G  PNV T+  LIDG  K    + A  ++  ++  +  K N     ++
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML-CEGVKVNKFIVDSL 490

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G  +  K+  A  L +     GL  +   YT+LI G  K G+   A+     +     
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN  I+ LC  G+ +EA   L +     L+ D+ TY  ++  H ++ ET +AL 
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M  + + P++  Y TL+A       +++++    E ++AG  P+  T+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +   +   + M   G   D   Y  L+  LC      +A    E M+G GI+P  +
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 579 TRVTLAYEYCKQG--DSA---TAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
           T   L   +CK    D+A    A ++ +++     I T NTL+  L S  R+G A 
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPN--IATFNTLLGGLESVGRIGEAG 784



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 4/378 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E A  +F +    G+  D  +Y  ++    + G +  A ++   ++DR  + D    
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C     G  K+A   L EM   G KP+  T+  +I   C+KG T KA +L L 
Sbjct: 558 NVFINCLC---MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL-LH 613

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++  + KPN+ TY  +++G      + +A+ LL  M   G  P++ T+  ++    +  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   D+ + M   G   +I  YN ++  LC  G  ++A  +L++     +  D IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  H K +    A   + +M+   ++P+I  + TL+       ++ E+     E   +
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P   TY  +  G+ +  N   A++ +  M   G  P   TY ALIS   K   + +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 562 CQFYESMIGKGISPCEVT 579
            + ++ M  +G+ P   T
Sbjct: 854 KELFKDMQKRGVHPTSCT 871



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 204/471 (43%), Gaps = 8/471 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +   + E   +++EM    +     T + V+    + GL++ A E    M  RG
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
           +  +  +Y  ++  + +      A      ML  G  ++   +  L+      G R  G 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV-----NGLRQNGK 499

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I++A  L ++    G   +   +T LIDGL K G    AF+ F + +   N  P+   Y 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK-FGQELMDRNMLPDAVVYN 558

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I+  C   K   A+  L  M+  GL P+ +TY ++I  HC+ G   +A  L+  M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN+  YN ++ GL   G V++A  LL +          +T+  +L    +       
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L +   M+ AGL+ DI  Y TL+   C     +++    +E + +G+ P   T+ ++I G
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + +  ++ +A   + +M     +P+  T+  L+ GL    ++ EA      M   G+ P 
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
            +T   LA  + KQ +   AM +   +  K ++  V+T    +    + GM
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 223/446 (50%), Gaps = 6/446 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++SF  + R+  GFS++ ++   G    T+T   ++   C  G +  A  +FD+M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGFRGSI 277
              +  +Y  ++   C++G    A R L +M+ +    +  T   +I   F D+     +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDR----QV 230

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  +  EM+ KG  PNV T+  +I GLCK    +    L  ++V S    PNV  +T 
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTT 289

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CKE  +  A  +++ M ++G+ P+  TYT+L+ GHC     + A  + D M ++G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+ +Y+ +I+G CK  R+ +A  L ++  QREL  + +TY  L+         + A+
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  MV +G  PD+  Y  L+   C+ + + ++    +    + L P  ++Y  +I G 
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G + +A   F  ++  G  PD  TY  +I+GLC Q  L EA + +  M   G SP +
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
            T   +   + +  ++ +A+ +L+ +
Sbjct: 530 CTYNLITRGFLRNNETLSAIQLLQEM 555



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 185/360 (51%), Gaps = 5/360 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  A  +F EM A+G+  + S+Y  ++   C+          ++ M+D   + +    T 
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+ A C +G    +  A ++++ M+++G +P+V T+T L+DG C +   ++A ++F  +V
Sbjct: 290 LVDALCKEGM---VTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R     PNV +Y+ +I+GYCK +++++A  L E M ++ L+PN  TY +LI+G C VG  
Sbjct: 347 RK-GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  L   M   G  P++  Y  ++D LCK   + +A  +LK      L  D  +Y I+
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    +  E + A  LF  +   GL+PD+  YT +I   C Q  + E+ K F+E  T G 
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY  +  G+LR+    SA++  Q M   G + D  T   LI  +     LD++ +
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTI-TLIVEMLSDDGLDQSVK 584



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 175/363 (48%), Gaps = 4/363 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L ++M   G   +VYT  ++I+  C     +  F +  K+ +   ++P+  T+T +I
Sbjct: 93  VLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKL-GHQPDTATFTTLI 151

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++M  +G  PN  TY +LI+G CKVGN   A  L+  M ++ C 
Sbjct: 152 RGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE 211

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  YN IID L K  +V EA  +  +   + +  +  TY  ++    K +E K    L
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              MV + + P++  +TTL+ A C++  +  +       I  G+ P   TYT+++ G+  
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  A K F  M + GCAP+ I+Y  LI+G CK  ++D+A   +E M  + + P  VT
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +     I  + T   L+  LC  + +  A      + 
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451

Query: 637 GKD 639
           G +
Sbjct: 452 GSN 454



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%), Gaps = 3/319 (0%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           +V+T   +I+ +C   +++    +L ++ + G  P+T T+T+LI G C  G    A  L 
Sbjct: 108 DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLF 167

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M  EG  PN   Y  +I GLCK G  + A  LL+   Q+  + + ITY  ++    K 
Sbjct: 168 DKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKD 227

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +  +AL +F  M+  G++P++  Y ++I   C+  + K       E + + + P    +
Sbjct: 228 RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIF 287

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T+++    ++G ++ A      M Q G  PD +TY AL+ G C +S++DEA + +++M+ 
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGM 627
           KG +P  ++  TL   YCK      AM + E + ++     I T NTLI  LC   R+  
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407

Query: 628 AALFFHKLLGKDQNVDRVS 646
           A   FH+++   Q  D V+
Sbjct: 408 AIALFHEMVASGQIPDLVT 426



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 4/232 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++  ++ A  +F+EMC R +  +  +Y  ++   C +GR+ +A      M+  G I D 
Sbjct: 365 CKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDL 424

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  +L+   C       + QA  +L+ +      P++ ++ ++IDG+C+ G  E A  L
Sbjct: 425 VTYRILLDYLCKTR---HLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDL 481

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L  S    P+V TYT MI+G C +  +  A  L   M   G  P+  TY  +  G  
Sbjct: 482 FSSL-SSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFL 540

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           +      A  L+  M   G + +      I++ L   G  Q   ++L +  Q
Sbjct: 541 RNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL  F RM+     P +  +  ++ +    K         ++  + G+     T   +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +     +        ++ ++G  PD  T+  LI GLC + K+ EA   ++ M+G+G  
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL +  CK G+S  A+ +L S+ +K     + T NT+I  L  +++V  A   
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 632 FHKLLGK 638
           F +++ K
Sbjct: 237 FSEMIAK 243



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 3/146 (2%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N     +    ++     +G L+    +   +++ GL     T   ++   C  GL
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  A ++F EM   G   D  +Y L+   + R      A + L  ML RG   D +T+TL
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVR 289
           ++    D G   S+KQ   +L E V+
Sbjct: 570 IVEMLSDDGLDQSVKQ---ILHEFVQ 592


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 258/551 (46%), Gaps = 24/551 (4%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYI----------VCATS-----LISNG 147
           V A L ++    VAL FFYWA    ++RH   +Y           +C  S     L+   
Sbjct: 177 VCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRR 236

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
              R  E    ++ S++  G+L++   ++  M   G+       N  + +      +E A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
               + M   G+  +  +Y  M+  YC + RV EA   L  M  +G + D  +   ++  
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 268 FCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            C +     I +  +L+++M ++ G  P+  T+  LI  L K    ++A   FLK  +  
Sbjct: 357 LCKEK---RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL-WFLKDAQEK 412

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            ++ +   Y+A++   CKE +M+ A+ L+  M      P+  TYT+++ G C++G  ++A
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKA 469

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L+ +M   G  PN  +Y A+++G+C+ G+  EA E++  + +     + ITY++++  
Sbjct: 470 KKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 529

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             ++ +  +A  +   MV  G  P       L+ + CR  +  E+ KF +E +  G    
Sbjct: 530 LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 589

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              +T++I G+ ++  + +A+     M  I    D  TY  L+  L K+ ++ EA +  +
Sbjct: 590 VVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 649

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRV 625
            M+ KGI P  VT  T+ + YC+ G     + ILE +  +   RT+ N +I KLC   ++
Sbjct: 650 KMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKL 709

Query: 626 GMAALFFHKLL 636
             A     K+L
Sbjct: 710 EEADTLLGKVL 720



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 169/382 (44%), Gaps = 50/382 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  + GR+ E   ++ EM     P    T   VV   C LG V+ A+++   M   G
Sbjct: 424 IVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 480

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              +  SY  ++   CR G+  EA   ++   +     ++ T ++++      G R  G 
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM-----HGLRREGK 535

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A +++ EMV KG+ P      +L+  LC+ G T +A R F++   +     NV  +T
Sbjct: 536 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEECLNKGCAINVVNFT 594

Query: 337 AMISGYCKEEKMN-----------------------------------RAEMLLERMKEQ 361
            +I G+C+ ++++                                    A  L+++M  +
Sbjct: 595 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 654

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           G+ P   TY ++I+ +C++G  +    +++ ++ ++ C      YN +I+ LC  G+++E
Sbjct: 655 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEE 711

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  LL K  +   ++D  T   L+  +LK+     A  + CRM    L PD+     L  
Sbjct: 712 ADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSK 771

Query: 481 AFCRQKKMKESEKFFQEAITAG 502
               + K+ E++K     +  G
Sbjct: 772 RLVLKGKVDEADKLMLRLVERG 793



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/347 (20%), Positives = 134/347 (38%), Gaps = 38/347 (10%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A + F    R   Y+ +   Y +M+    K +    +  +L  MK +G+      ++ ++
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + + G    A  ++ LM + G  PN+   N  ID   +  R+++A   L+        
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE-------- 301

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                                      RM   G+ P++  Y  +I  +C   +++E+ + 
Sbjct: 302 ---------------------------RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334

Query: 495 FQEAITAGLFPTKETYTSMICGYL-RDGNISSAVKYFQRM-NQIGCAPDNITYGALISGL 552
            ++  + G  P K +Y + I GYL ++  I       ++M  + G  PD +TY  LI  L
Sbjct: 335 LEDMHSKGCLPDKVSYYT-IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            K    DEA  F +    KG    ++    + +  CK+G  + A  ++  +D    + T 
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTY 453

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
             ++   C    V  A      +       + VS  AL N    + K
Sbjct: 454 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 500



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G+     A++ ++ ++ R  +++++ K       AG+ P      + I  ++R   
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A+++ +RM  +G  P+ +TY  +I G C   +++EA +  E M  KG  P +V+  T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +    CK+        +++ + K+  +     T NTLI  L        A  F      K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412

Query: 639 DQNVDRVSLAALKNACYESNKYALFSDL 666
              +D++  +A+ +A  +  + +   DL
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDL 440


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 218/483 (45%), Gaps = 62/483 (12%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC--- 199
           +I+ G +  +  +   ++ ++   G     + ++ +M + G        N ++G  C   
Sbjct: 360 MITEGCYP-SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418

Query: 200 ---ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
               L ++E AE+ + EM    V  +  +   +    C  G+  +A   +  M+ +G I 
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D +T + +I   C+      +  AF L EEM      P+V+T+T+LID  CK G  ++A 
Sbjct: 479 DTSTYSKVIGLLCNAS---KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           + F ++VR D   PNV TYTA+I  Y K  KM+ A  L E M  +G +PN  TYT+LI G
Sbjct: 536 KWFDEMVR-DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 377 HCKVGNFERA-------------------------------------------------- 386
           HCK G  E+A                                                  
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 387 -YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
             DL+D+M  EGC PN   Y+A+IDG CK G++ EA  +  K  +R    +  TY+ L+ 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K      AL +  RM++    P++  YT +I   C+  K  E+ +        G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT+MI G+ + G +   ++  ++M   GCAP+ +TY  LI+  C    LD+A Q  
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 566 ESM 568
           + M
Sbjct: 835 DEM 837



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 219/514 (42%), Gaps = 68/514 (13%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
           VV  L+      + + FF WA     + H   +Y      L   GN              
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGN-------------- 177

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
                R+ E F  + E+ +    ++   LN ++   C  GL   A E    +   G    
Sbjct: 178 ----DRVPEQF--LREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPS 231

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  +V  +    R+  A      M D G  +D  TL   +   C  G     ++A  
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALA 288

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L+E   ++ +K +   +T +I GLC+    E+A   FL  +RS +  PNV TY  ++ G 
Sbjct: 289 LIE---KEEFKLDTVIYTQMISGLCEASLFEEAMD-FLSRMRSSSCIPNVVTYRILLCGC 344

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            ++ ++ R + +L  M  +G  P+   + SLI+ +C+ G++  AY L+  MG  GC P  
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGY 404

Query: 403 YAYNAIIDG-----------------------------------------LCKKGRVQEA 421
             YN +I G                                         LC  G+ ++A
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y ++++   +    D  TY+ ++      ++   A  LF  M    + PD+  YT LI +
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC+   ++++ K+F E +  G  P   TYT++I  YL+   +SSA + F+ M   GC P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +TY ALI G CK  ++++ACQ Y  M G    P
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 32/503 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F E  RL   + +  EM+++G  +   TL   V + C+ G    A  + ++   + 
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK- 296

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  M+   C      EA  +LS M     I +  T  +L+     K   G  K
Sbjct: 297 --LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCK 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   +L  M+ +G  P+      LI   C+ G    A++L LK +     +P    Y  +
Sbjct: 355 R---ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL-LKKMGDCGCQPGYVVYNIL 410

Query: 339 ISGYCKEEKM------NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           I G C  EK+        AE     M +  ++ N    ++L    C  G FE+AY ++  
Sbjct: 411 IGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIRE 470

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  P+   Y+ +I  LC   +V  A+ L ++     +  D  TYTIL+    K   
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            +QA   F  MV+ G  P++  YT LI A+ + +KM  + + F+  ++ G  P   TYT+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPD----------NI------TYGALISGLCKQS 556
           +I G+ + G I  A + + RM      PD          NI      TYGAL+ GLCK  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           K+ EA    + M  +G  P  +    L   +CK G    A ++   + ++ +   + T +
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 614 TLIRKLCSEKRVGMAALFFHKLL 636
           +LI +L  +KR+ +A     ++L
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 152/331 (45%), Gaps = 41/331 (12%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V   C+   V+ A ++ D M   G   +   Y  ++  +C++G++ EA    + M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +RG   +  T + LI    D+ F+   +  A ++L  M+     PNV  +T +IDGLCK
Sbjct: 698 SERGYGPNVYTYSSLI----DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G T++A+RL + ++      PNV TYTAMI G+ K  K+++   L+ +M  +G  PN  
Sbjct: 754 VGKTDEAYRL-MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGK--------------EG----------------- 397
           TY  LI   C  G  + A+ L+D M +              EG                 
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872

Query: 398 --CTPNIYAYNAIIDGLCKKGRVQEAYELLK--KAFQRELQADKITYTILLSEHLKQAET 453
               P I AY  +ID  CK GR++ A EL K   +      ADK  Y+ L+      ++ 
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +A  L+  M+K G  P++  +  L+    R
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 12/335 (3%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++    FL+ +R ++ +        +I   C+    N A   L R+K+ G  P+  T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +L+    +    + AY +   M   G   + Y     +  LCK GR +EA  L++K  
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-- 292

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
             E + D + YT ++S   + +  ++A+    RM  +   P++  Y  L+    R++++ 
Sbjct: 293 -EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
             ++     IT G +P++  + S+I  Y R G+ S A K  ++M   GC P  + Y  LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 550 SGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G+C   K      L+ A + Y  M+   +   +V    LA   C  G    A  I+  +
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM 471

Query: 604 DKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             K +I   +T   +I  LC+  +V  A L F ++
Sbjct: 472 MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 43/305 (14%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           E  H V   ++  F ++G+L E   +  +M+  G      T + ++    +   ++ A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           V   M       +   Y  M+   C++G+  EA R +S M ++G   +  T T +I  F 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF- 786

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G  G + +  EL+ +M  KG  PN  T+ VLI+  C  G  + A +L L  ++   + 
Sbjct: 787 --GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL-LDEMKQTYWP 843

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE----- 384
            ++  Y  +I G+ +E  ++    LL+ + E   +P    Y  LI   CK G  E     
Sbjct: 844 KHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL 901

Query: 385 --------------------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
                                           +A++L   M K G  P +  +  ++ GL
Sbjct: 902 HKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961

Query: 413 CKKGR 417
            +  R
Sbjct: 962 IRINR 966


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 259/586 (44%), Gaps = 65/586 (11%)

Query: 146 NGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
           NG   RA E+++ M               ++ F +IG L     ++ E++   L     T
Sbjct: 30  NGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVIT 89

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
              ++   C+   +E A  ++DEM  + +  D  +Y  ++   C+ G+V EA      M 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           + G + +  +   LI +   +G   ++ +AF L   MV +G   +V  +T L+DGL K G
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEG---NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               A  +F +++  ++  PN  TY+A+I G+CK   +N+ E+LL+ M+E+ + PN   Y
Sbjct: 207 MANNAEDMF-QVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------------- 411
           +S++ G+ K G    A D+M  M +    PN++ Y  +IDG                   
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 412 ----------------LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
                           L + GR++EA EL K    R L  D++ YT ++    K  +   
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M +     D+ AY  LI    +  K  ESE F       GL P   T+ +MI 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMIN 444

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y ++GN+ +A+K    M   G  P++IT   L+  LC   ++++       M+  G  P
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK------KLWIRTVNTLIRKLCSEKRVGMAA 629
              T   +     K   S  A +IL   D+      KL + T NTLI   C    +  A 
Sbjct: 505 TPTTHKAVLDASSK---SRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           L F  ++GK    D ++  AL +  C  S+    F+  SQ + EG+
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 237/480 (49%), Gaps = 12/480 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R+ E    ++  +   G +     ++  M   G      T N ++   C++G +  A+++
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
             E+    +  +  +Y  ++ AYC+   + +A      M  +  + D  T T ++   C 
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RSDNYK 329
            G    +++A  +  EM   G  PN +++  LID L K+G   +AF L  ++V R   + 
Sbjct: 135 SG---KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF- 190

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +V  YTA++ G  K    N AE + + + E+ L+PN  TY++LI GHCK+G+  +   L
Sbjct: 191 -DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M ++   PN+  Y++I+DG  KKG + EA ++++K  QR +  +   Y  L+  + K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   AL LF  M   GL  +     + +    R  +M+E+++ F++ ++ GL P +  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YTSM+ G+ + G  S A    Q M +     D + Y  LI+GL K  K  E+  F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRV 625
             G++P   T  T+   YCK+G+   A+ +L  + K   ++    T N L+++LC+   +
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM-KSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 218/466 (46%), Gaps = 31/466 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F + G+  + F++  EMT           N ++    +LG  E +E     M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D++++  M+ AYC+ G +  A + L+ M   G   ++ T  +L+   C  G    I+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIE 488

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +LL +M+  G+ P   TH  ++D   K    +       +LV     K ++ TY  +
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLV-GMGVKLDLSTYNTL 547

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS +C+   + RA ++ + M  +G+L +  TY +LI+G+C   + ++A+ +   M  EG 
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  YN ++ GL     ++EA  L+ +  +R L  +  TY IL+S H K    K+ + 
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+C M+  G  P    Y  LI+ F + KKM ++++  QE    G+ P   TY  +ICG+ 
Sbjct: 668 LYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +        K  +R           +Y A            EA + +E M  KG  PCE 
Sbjct: 728 KLSKQPELNKSLKR-----------SYQA------------EAKRLFEEMNEKGFIPCEN 764

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
           T   +++   K G  A A  IL  L KK   +TV  L+  +  E R
Sbjct: 765 TLACISFTLAKPGKKADAQRILNKLYKK---KTVQELLAGVLWESR 807


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 255/534 (47%), Gaps = 20/534 (3%)

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS---------------SF 163
           FF WA    K+RH   ++      L      + A  VM+ M+                S+
Sbjct: 112 FFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSY 171

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
           +  G+L+    ++  M  +G        N  V +    G ++ A E  + M   GV  D 
Sbjct: 172 SRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDV 231

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  ++   C   R+ +A   +S+ML  G + D  +   +++  C +     ++    L
Sbjct: 232 VTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQN---L 288

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           LE M   G  P+  T+ +LI GL K G  ++A   FL+      ++ +   Y+A +  +C
Sbjct: 289 LERMSDAGIFPDQVTYNMLIHGLAKHGHADEALS-FLRESEGKRFRVDEVGYSATVHSFC 347

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
              +M  A+ ++  M  +G  P+  TY++++ G C++G  ++A  +M  M K GC PN  
Sbjct: 348 LNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTV 407

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            + A+++GLCK G+  EA+ELL K+ +       ITY++++    ++ + K++  +  +M
Sbjct: 408 THTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQM 467

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++ G  P       LI A C ++K  +++ F ++  + G F     +T++I G+ R G++
Sbjct: 468 LQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDL 527

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            SA+     M      PD +TY  ++  L ++ K+ EA    E M+ +G+ P  VT  T+
Sbjct: 528 ESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTV 587

Query: 584 AYEYCKQGDSATAMIILES-LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            + YC++G     + +L+  L K+ +    N +I KLC+  ++  A     K+L
Sbjct: 588 IHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVL 641



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 175/386 (45%), Gaps = 24/386 (6%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS- 161
           ++  LA    +  ALSF   + G  +FR     Y     S   NG    A E++  M+S 
Sbjct: 307 LIHGLAKHGHADEALSFLRESEG-KRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISK 365

Query: 162 --------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                          F  IG L +   M+  M  NG    T T   ++   C++G    A
Sbjct: 366 GCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEA 425

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            E+ ++         A +Y +++  + R G++ E+   +  ML +G       + LLI A
Sbjct: 426 WELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHA 485

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C++      K   + +E+   KG   NV   T +I G  ++G  E A  L   +  + N
Sbjct: 486 LCNERKPADAK---DFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLT-N 541

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V TYT ++    ++ KM  A  L+E+M  +GL P   TY ++I+ +C+ G  E   
Sbjct: 542 RHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLL 601

Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           +L+D ++ KEG +    AYN +I+ LC  G++ EA  LL K  +   + D  T  IL+  
Sbjct: 602 NLLDKMLAKEGFSS---AYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDS 658

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDI 472
            L +    Q+  + CRM +  L PD+
Sbjct: 659 FLNRGLPLQSYNVACRMFQRNLIPDL 684



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 173/384 (45%), Gaps = 8/384 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   A+ G   E  S + E       +     +  V   C  G +  A+E+  EM ++G
Sbjct: 307 LIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKG 366

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V  +CR+G + +A + +  M   G   +  T T L+   C  G      
Sbjct: 367 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVG---KSS 423

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+ELL +   + W P+  T++V++ G  ++G  +++  + +++++   + P       +
Sbjct: 424 EAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQK-GFFPTTVEINLL 482

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C E K   A+  +E+ + +G   N   +T++I+G  + G+ E A  L+D M     
Sbjct: 483 IHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNR 542

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  ++D L +KG+++EA  L++K   R L    +TY  ++  + ++   +  L 
Sbjct: 543 HPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLN 602

Query: 459 LFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           L  +M+ K G +    AY  +I   C   K+ E+     + +        +T   ++  +
Sbjct: 603 LLDKMLAKEGFSS---AYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSF 659

Query: 518 LRDGNISSAVKYFQRMNQIGCAPD 541
           L  G    +     RM Q    PD
Sbjct: 660 LNRGLPLQSYNVACRMFQRNLIPD 683


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 224/438 (51%), Gaps = 7/438 (1%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N+++    ++   E    + ++M   G+  D  +Y + +  +CR  +++ A   L+ M+
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   D  TL+ L+  +C       I  A  L+++MV  G+KP+ +T T LI GL    
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSK---RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
              +A  L  ++V+    +P++ TY  +++G CK   ++ A  LL++M++  +  +   Y
Sbjct: 203 KASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            ++I G CK  + + A +L   M  +G  P+++ Y+++I  LC  GR  +A  LL    +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           R++  + +T++ L+   +K+ +  +A  L+  M+K  ++PDI  Y++LI  FC   ++ E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++  F+  I+   FP   TY+++I G+ +   +   ++ F+ M+Q G   + +TY  LI 
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
           G  +    D A   ++ M+  G+ P  +T   L    CK G  A AM++ E L +     
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 609 -IRTVNTLIRKLCSEKRV 625
            I T N +I  +C   +V
Sbjct: 502 DIYTYNIMIEGMCKAGKV 519



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 213/403 (52%), Gaps = 5/403 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +    S++ +M    +       N ++   C+   ++ A  +F EM  +G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C  GR ++A R LS M++R    +  T + LI AF  +G    + 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLV 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   P+++T++ LI+G C     ++A  +F  ++  D + PNV TY+ +
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTL 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M ++GL+ NT TYT+LI+G  +  + + A  +   M   G 
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  YN ++DGLCK G++ +A  + +   +  ++ D  TY I++    K  + +    
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G++P++ AY T+I+ FCR+   +E++   ++    G  P   TY ++I   L
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+  ++ +  + M   G A D  T G L++ +    +LD++
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 210/448 (46%), Gaps = 7/448 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ +  ++V +M   G    T T   ++           A  + D+M 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR 274
            RG   D  +Y  +V   C+ G +  A   L  M ++G I  D      +I   C     
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK---Y 271

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  L  EM  KG +P+V+T++ LI  LC  G    A RL   ++      PNV T
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVT 330

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +LM 
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            + C PN+  Y+ +I G CK  RV+E  EL ++  QR L  + +TYT L+    +  +  
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +MV  G++P+I  Y  L+   C+  K+ ++   F+    + + P   TY  MI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  + G +    + F  ++  G +P+ I Y  +ISG C++   +EA    + M   G  
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570

Query: 575 PCEVTRVTLAYEYCKQGD-SATAMIILE 601
           P   T  TL     + GD  A+A +I E
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKE 598



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 188/363 (51%), Gaps = 8/363 (2%)

Query: 281 FELL----EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           FEL+    E+M   G   ++YT+++ I+  C++     A  +  K+++   Y+P++ T +
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLS 157

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++++GYC  ++++ A  L+++M E G  P+T T+T+LI+G         A  L+D M + 
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P++  Y  +++GLCK+G +  A  LLKK  + +++AD + Y  ++    K      A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L LF  M   G+ PD+  Y++LI+  C   +  ++ +   + I   + P   T++++I  
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           ++++G +  A K +  M +    PD  TY +LI+G C   +LDEA   +E MI K   P 
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFH 633
            VT  TL   +CK       M +   + ++  +    T  TLI      +    A + F 
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 634 KLL 636
           +++
Sbjct: 458 QMV 460



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 223/461 (48%), Gaps = 7/461 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ F    +L    +++ +M   G      TL+ ++   C    +  A  + D+M   G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  ++  ++       + +EA   +  M+ RG   D  T   ++   C    RG I  
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---RGDIDL 241

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  LL++M +   + +V  +  +IDGLCK    + A  LF ++  +   +P+V TY+++I
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLI 300

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           S  C   + + A  LL  M E+ + PN  T+++LI    K G    A  L D M K    
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+I+ Y+++I+G C   R+ EA  + +    ++   + +TY+ L+    K    ++ + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M + GL  +   YTTLI  F + +    ++  F++ ++ G+ P   TY  ++ G  +
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G ++ A+  F+ + +    PD  TY  +I G+CK  K+++  + + ++  KG+SP  + 
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
             T+   +C++G    A  +L+ + +   +    T NTLIR
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 166/367 (45%), Gaps = 12/367 (3%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A  LF  +V+S  + P++  +  ++S   K  K      L E+M+  G+  +  TY+
Sbjct: 64  VDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
             I   C+      A  ++  M K G  P+I   +++++G C   R+ +A  L+ +  + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             + D  T+T L+       +  +A+ L  +MV+ G  PD+  Y T++   C++  +  +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               ++     +      Y ++I G  +  ++  A+  F  M+  G  PD  TY +LIS 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKK 606
           LC   +  +A +    MI + I+P  VT   L   + K+G    A      +I  S+D  
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----AL 662
           ++  T ++LI   C   R+  A   F  ++ KD   + V+ + L     ++ +      L
Sbjct: 363 IF--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 663 FSDLSQR 669
           F ++SQR
Sbjct: 421 FREMSQR 427



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 3/310 (0%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K++ A  L   M +    P+   +  L+    K+  FE    L + M   G + ++Y Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
             I+  C++ ++  A  +L K  +   + D +T + LL+ +        A+ L  +MV+ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  PD   +TTLI       K  E+     + +  G  P   TY +++ G  + G+I  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +   ++M +     D + Y  +I GLCK   +D+A   +  M  KGI P   T  +L   
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 587 YCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G  + A  +L + +++K+   + T + LI     E ++  A   + +++ +  + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 644 RVSLAALKNA 653
             + ++L N 
Sbjct: 363 IFTYSSLING 372


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 179/693 (25%), Positives = 302/693 (43%), Gaps = 72/693 (10%)

Query: 45  QPAFSSTSSSPSP-PQSLVKTVC-SMVLESYYQQFHLRSSPPRLNLQ----IDIDSLTHE 98
           +PA S   SS  P PQ    TV  ++ L    +Q H R +PP L+      +  D +T  
Sbjct: 97  RPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMS 156

Query: 99  QAITVVA--SLANEAGSMV----------ALSFFYWAI---GFAKFRHF----------- 132
            A+  ++   L  EA ++            L    W     G+ K +             
Sbjct: 157 TALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMT 216

Query: 133 ---MRLYIVCATSLIS----NGNFERAHEVMQCM---------------VSSFAEIGRLK 170
              + L +V   +L++    +G+ + A EV + M               +  + ++ R++
Sbjct: 217 TQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIE 276

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E F++   M  +G+     TL+ +V   C  G    A  +F EM   GV  +  +Y   +
Sbjct: 277 EAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFI 336

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            +  ++ RV E+   L  M+ RG  +D   L +  T     G  G I++A ++L   +  
Sbjct: 337 DSLAKVQRVNESLGLLGEMVSRGVAMD---LVMYTTVMDRLGKEGKIEEAKDVLRHALSD 393

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              PN  T+TVL+D  C+ G  + A ++ L++    +  PNV T++++++G  K   + +
Sbjct: 394 NITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM-EEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   + +MK+ G+ PN  TY +LI G  K    E A D+   M  EG   N +  +++++
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GL K G ++EA  L K   +R L  D + Y  L+    K      AL +   +++  L+P
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   Y   I   CR  K  E++ F +E    GL P + TY +MI    R+GN S A+K  
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLL 632

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M      P+ ITY  L+ GL +   +++A      M   G +P  +T     Y    Q
Sbjct: 633 NEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT-----YRRVLQ 687

Query: 591 G--DSATAMIILESLDKKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
               S +  +ILE  +  +       I   NTL+  LC       A +   ++LG+    
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 643 DRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
           D ++  AL    C  S+    F+  +Q + +G+
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGL 780



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 207/449 (46%), Gaps = 39/449 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G ++E  ++  +M   GL L       ++    + G +  A +V  E+
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  DA  Y + +   CR+G+ +EA  +L  M + G   D AT   +I+A C +G  
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREG-- 623

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
            +  +A +LL EM     KPN+ T+T L+ GL + G  EKA +  L  + S  + P    
Sbjct: 624 -NTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA-KYLLNEMASAGFTPTPLT 681

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++L+ M 
Sbjct: 682 YRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEML 741

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+ P+T T+ +LI GHCK  + + A+     M  +G +PNI  +N ++ GL   GR+ 
Sbjct: 742 GRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIG 801

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  ++ +  +  L+ + +TY IL++ + K++   +AL L+C MV  G  P    Y +LI
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLI 861

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F E    G+  T  TY  ++ G+ +  N +      + M ++G  
Sbjct: 862 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFK 921

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESM 568
           P   T  ++     K     EA +  +++
Sbjct: 922 PSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 195/415 (46%), Gaps = 14/415 (3%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E A +V+ +M   GV A+      +V    + G + EA+     M +RG +LD+     L
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 265 ITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +    D  F+ G++  A ++ +E++ +   P+   + V I+ LC+ G   +A + FLK +
Sbjct: 546 M----DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEA-KSFLKEM 600

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R+   +P+  TY  MIS  C+E   ++A  LL  MK   + PN  TYT+L+ G  + G  
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVV 660

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR----VQEAYELLKKAFQRELQADKIT 439
           E+A  L++ M   G TP    Y  ++   C   R    + E +EL+  A    L AD   
Sbjct: 661 EKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGA---GLHADITV 716

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+        T++A  +   M+  G+ PD   +  LI   C+   +  +   + + +
Sbjct: 717 YNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQML 776

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   T+ +++ G    G I  A      M ++G  P+N+TY  L++G  K+S   
Sbjct: 777 HQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKV 836

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           EA + Y  M+ KG  P   T  +L  ++ K G    A  +   + ++  + T +T
Sbjct: 837 EALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSST 891



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 219/546 (40%), Gaps = 71/546 (13%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + S A++ R+ E   ++ EM + G+ +       V+    + G +E A++V     +  +
Sbjct: 336 IDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNI 395

Query: 220 CADASSYKLMVVAYCRMGR-----------------------------------VTEADR 244
             +  +Y ++V A+CR G                                    + +A  
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAG 455

Query: 245 WLSAMLDRGAILDNATLTLLITAF--CD----------------------------KGFR 274
           ++  M D G   +  T   LI  F  C                              G R
Sbjct: 456 YMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLR 515

Query: 275 --GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G+I++A  L ++M  +G   +   +  L+DGL K G    A ++  +L+   N  P+ 
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMER-NLSPDA 574

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y   I+  C+  K + A+  L+ M+  GL P+  TY ++I   C+ GN  +A  L++ 
Sbjct: 575 VVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNE 634

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      PN+  Y  ++ GL + G V++A  LL +          +TY  +L        
Sbjct: 635 MKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRS 694

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
               L +   M+ AGL+ DI  Y TL+   C     +++     E +  G+ P   T+ +
Sbjct: 695 PYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNA 754

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ +  ++ +A   + +M   G +P+  T+  L+ GL    ++ EA      M   G
Sbjct: 755 LILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMG 814

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAA 629
           + P  +T   L   Y K+ +   A+ +   +  K +I    T N+LI        +  A 
Sbjct: 815 LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAK 874

Query: 630 LFFHKL 635
             F ++
Sbjct: 875 ELFSEM 880


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 258/584 (44%), Gaps = 41/584 (7%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P FSS S +    +SL        L S+ +  H+   P  ++    + S+   +   
Sbjct: 27  SLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYP 86

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
            V SL+N+  S       Y                                  +  +++S
Sbjct: 87  TVFSLSNQMDSFGIPPDVY---------------------------------TLNILINS 113

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           F  + RL   FS++ ++   G    T+T   ++   C  G +  A  +FD+M   G   +
Sbjct: 114 FCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPN 173

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  ++   C++G    A R L +M       D    T +I + C       + +AF 
Sbjct: 174 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR---QVTEAFN 230

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L  +MV +G  P+++T+T LI  LC     +    L  +++ S    P+V  ++ ++   
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPDVVIFSTVVDAL 289

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CKE K+  A  +++ M  +G+ PN  TY +L+ GHC     + A  + D M   G  PN+
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
            +YN +I+G CK  R+ +A  L ++  Q+EL  + +TY  L+         + A+ LF  
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHE 408

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           MV  G  PD+  Y  L+   C++  + E+    +    + + P  + YT +I G  R G 
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + +A   F  ++  G  P+  TY  +I+GLC++  LDEA + +  M G G SP   T  T
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEK 623
           +     +  ++  A+ +L+ +  + +   + T   L+  LC +K
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 572



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 191/397 (48%), Gaps = 9/397 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F L  +M   G  P+VYT  +LI+  C       AF +  K+++   ++P+  T+T +I
Sbjct: 88  VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKL-GHQPDTATFTTLI 146

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++M  +G  PN  TY +LI G CKVGN   A  L+  M +  C 
Sbjct: 147 RGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 206

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V EA+ L  K   + +  D  TYT L+       E K    L
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M+ + + PD+  ++T++ A C++ K+ E+       I  G+ P   TY +++ G+  
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M   G AP+ I+Y  LI+G CK  ++D+A   +E M  K + P  VT
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +     I  + T   L+  LC +  +  A      + 
Sbjct: 387 YNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 637 GKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
           G + + D ++    +   C      A   +FS+LS +
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 168/389 (43%), Gaps = 36/389 (9%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +  GN +    V   ++ S  +  ++ E F++  +M   G+     T   ++   C L  
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            ++   + ++M    +  D   +  +V A C+ G++TEA   +  M+ RG   +  T   
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+   C    +  + +A ++ + MV  G+ PNV ++  LI+G CK    +KA  LF ++ 
Sbjct: 320 LMDGHC---LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 376

Query: 324 RSD------NYK---------------------------PNVHTYTAMISGYCKEEKMNR 350
           + +       Y                            P++ TY  ++   CK+  ++ 
Sbjct: 377 QKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDE 436

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  LL+ ++   + P+   YT +I G C+ G  E A D+   +  +G  PN+  Y  +I+
Sbjct: 437 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMIN 496

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC++G + EA +L  +        D  TY  +    L+  E  +A+ L   M+  G + 
Sbjct: 497 GLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSA 556

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           D+   T L+   C  K  +  ++   E +
Sbjct: 557 DVSTTTLLVEMLCDDKLDQSVKQILSEFV 585



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 41/353 (11%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             RM      P+T  +  L+    K   +   + L + M   G  P++Y  N +I+  C 
Sbjct: 57  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 116

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
             R+  A+ +L K  +   Q D  T+T L+     + +   AL LF +M+  G  P++  
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 176

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y TLI   C+      + +  +        P    YTS+I    +D  ++ A   F +M 
Sbjct: 177 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236

Query: 535 QIGCAPDNITYGALI-----------------------------------SGLCKQSKLD 559
             G +PD  TY +LI                                     LCK+ K+ 
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLI 616
           EA    + MI +G+ P  VT   L   +C Q +   A+ + +++    +   V   NTLI
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES---NKYALFSDL 666
              C  +R+  A   F ++  K+   + V+   L + C+     +  ALF ++
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEM 409



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 20/311 (6%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSSFAEIG---------------RLKEGFSMVIEM 179
           ++     +L   G    AH+V+  M+    E                  + E   +   M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            +NG      + N ++   C++  ++ A  +F+EMC + +  +  +Y  ++   C +GR+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRL 399

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A      M+  G I D AT  +L+   C K     + +A  LL+ +      P++  +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKS---HLDEAMALLKTIEGSNMDPDIQIY 456

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T++IDG+C+ G  E A  +F  L  S   +PNV TYT MI+G C+   ++ A  L   M 
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNL-SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  P+  TY ++  G  +     RA  L+  M   G + ++     +++ LC     Q
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQ 575

Query: 420 EAYELLKKAFQ 430
              ++L +  Q
Sbjct: 576 SVKQILSEFVQ 586



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 3/209 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+ L       AL  F RM+     P    +  L+ +  + K+         +  + G+ 
Sbjct: 42  SKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIP 101

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T   +I  +     +  A     ++ ++G  PD  T+  LI GLC + K+ +A   
Sbjct: 102 PDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHL 161

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           ++ MIG+G  P  VT  TL    CK G++  A+ +L S+++   +  +    ++I  LC 
Sbjct: 162 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 221

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +++V  A   F K++G+  + D  +  +L
Sbjct: 222 DRQVTEAFNLFSKMVGQGISPDIFTYTSL 250


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 215/421 (51%), Gaps = 11/421 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL---PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++  F+  G L     ++ EM +NG     ++ +TL + +   C+ G V  A E F  M 
Sbjct: 15  LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGL---CDAGRVVEALEHFRAM- 70

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+    D  +Y  +V A C+ G+  EA   L  M+ RG   D  T + LI   C     G
Sbjct: 71  AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK---FG 127

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           S +QAF +LE+++++G   +      +I  LC K  + +     L +V +  + P V  +
Sbjct: 128 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 187

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+G+CK + ++ A  LLE M E+G +PN  T+T LI G CK      A  L++ M  
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC+PN+  Y+ +I+GLCK+G+V +AYEL +   +R    + +T+ IL+    K    ++
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE-TYTSMI 514
           A  L+ RM + G  PDI  Y +LI   C+  ++ E+ + FQ    +G+      TY+++ 
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   G ++ A + F  +   G +PD  TY +LI   CK S+  E  +  E M  KG  
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427

Query: 575 P 575
           P
Sbjct: 428 P 428



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 204/416 (49%), Gaps = 7/416 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A ++ +EM + G   +A  +  ++   C  GRV EA     AM  +    D  T 
Sbjct: 23  GDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTY 81

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T L+ A C  G      +A  +L EM+ +G  P+  T + LIDGLCK G  E+AFR+   
Sbjct: 82  TALVHALCKAG---KFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 138

Query: 322 LVRSDNYKPNVHTYTAMISGYC-KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++      +   +  +I   C K   +  A  +L  +  +G  P    +  +I G CK 
Sbjct: 139 VIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 197

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
            + + AY L+++M ++GC PN++ +  +I GLCK  RV EA +LL+K        + +TY
Sbjct: 198 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTY 257

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + +++   KQ +   A  LF  M +    P++  +  LI   C+ K+++E+ + +     
Sbjct: 258 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 317

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN-ITYGALISGLCKQSKLD 559
            G  P   TY S+I G  +   +  A + FQ + + G +  N +TY  L  G     ++ 
Sbjct: 318 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 377

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
           +AC+ +  ++ KG SP   T  +L  EYCK   +   + ++E +  K +   VNTL
Sbjct: 378 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 9/387 (2%)

Query: 271 KGFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           +GF   G +  A +LLEEM   G++ N   HT L+ GLC  G   +A   F  + +  + 
Sbjct: 17  RGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK--DC 74

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+V TYTA++   CK  K + A+ +L  M  +G  P+T T+++LI G CK G+ E+A+ 
Sbjct: 75  APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFR 134

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKK-GRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +++ + + G   +  A+  II  LC K   V+ A ++L     +      + + ++++  
Sbjct: 135 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 194

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +   A  L   M++ G  P++  +T LI   C+  ++ E+++  ++ +T G  P  
Sbjct: 195 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNV 254

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+++I G  + G +  A + FQ M +  C P+ +T+  LI GLCK  +++EA Q Y  
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 314

Query: 568 MIGKGISPCEVTRVTLAYEYCK--QGDSATAMI--ILESLDKKLWIRTVNTLIRKLCSEK 623
           M   G +P  +T  +L    CK  Q D A  +   I ES        T +TL     +  
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
           R+  A   F  L+ K  + D  +  +L
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSL 401



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 210/508 (41%), Gaps = 82/508 (16%)

Query: 147 GNFERAHE-VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           GN + A E ++Q + + +  +    +   +VI     G        N V+   C+   ++
Sbjct: 145 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIA---KGFTPTVLMFNLVINGFCKAKDLD 201

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A ++ + M  +G   +  ++ +++   C+  RV EA + L  M+  G   +  T + +I
Sbjct: 202 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVI 261

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C +G    +  A+EL + M R+   PNV TH +LIDGLCK    E+A +L+ ++ R 
Sbjct: 262 NGLCKQG---QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM-RE 317

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE------------------------- 360
               P++ TY ++I G CK  +++ A  L + + E                         
Sbjct: 318 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 377

Query: 361 -----------QGLLPNTNTYTSLIYGHCKV----------------------------- 380
                      +G  P+  TYTSLI  +CK                              
Sbjct: 378 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 437

Query: 381 -----GNF-ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ---R 431
                GN  ERA  L D M   GCT +   YN +++G+ +  +  +A  +L++      R
Sbjct: 438 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDR 497

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           +          L+    +   T  A  L  +M + G    + +Y  L++   R ++  E+
Sbjct: 498 KFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEA 557

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            + F+  ++AG  P   T   +I        +  A +  QRM+++GC PD  T   LI G
Sbjct: 558 TQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 617

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVT 579
            CK  + D A +  E M   G+ P + T
Sbjct: 618 YCKSGRADLARKLLEEMTEAGLEPNDTT 645



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 201/454 (44%), Gaps = 79/454 (17%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK------------------------ 329
           PN +T+ +LI G    G  + A +L L+ ++S+ ++                        
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQL-LEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 330 ----------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
                     P+V TYTA++   CK  K + A+ +L  M  +G  P+T T+++LI G CK
Sbjct: 66  HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 380 VGNFERA-----------------------------YDLMDLMGK-------EGCTPNIY 403
            G+ E+A                             Y+ ++L  K       +G TP + 
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N +I+G CK   +  AY+LL+   ++    +  T+TIL++   K     +A  L  +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V  G +P++  Y+T+I   C+Q ++ ++ + FQ        P   T+  +I G  +   I
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE-VTRVT 582
             A + + RM + GCAPD ITY +LI GLCK  ++DEA Q ++++   G+S    VT  T
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L + Y   G  A A  I   L  K +   + T  +LI + C   R         ++  K 
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425

Query: 640 QNVDRVSLAALKNACYESN----KYALFSDLSQR 669
                 +L+A+    +E N       LF  ++ R
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 177/399 (44%), Gaps = 23/399 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y      L   G  + A+E+ Q M               +    +  R++E   +   M 
Sbjct: 257 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 316

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRV 239
             G      T N ++   C+   V+ A ++F  +   GV  A+A +Y  +   Y  +GR+
Sbjct: 317 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 376

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A R  S ++D+G   D AT T LI  +C K  R        L+EEM  KG+ P V T 
Sbjct: 377 ADACRIFSMLVDKGFSPDLATYTSLILEYC-KTSRAVEVVE--LVEEMASKGFPPRVNTL 433

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM- 358
           + ++ GL +   TE+A +LF  +  +     +   Y  ++ G  +  K N+A  +LE++ 
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMA-ARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492

Query: 359 --KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             +++   P+++   +L+   C+VG  + A  L+  M + G    + +YN ++ GL +  
Sbjct: 493 DKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQ 552

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R  EA ++ +         +  T  +++S     A+   A  L  RM K G  PDI    
Sbjct: 553 RWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCN 612

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           TLI  +C+  +   + K  +E   AGL P   T+  + C
Sbjct: 613 TLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 651



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C P+  TYG LI G      LD A Q  E M   G     V   TL    C  G    A+
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 598 IILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-C 654
               ++ K     + T   L+  LC   +   A     +++ +    D V+ + L +  C
Sbjct: 65  EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 655 YESNKYALFSDLSQRIAEGIG 675
              ++   F  L   I  G+G
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMG 145


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 155/617 (25%), Positives = 292/617 (47%), Gaps = 42/617 (6%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSS-PPRLNLQID--IDSLTHEQAITVVASLANEAGSMV 115
             LV+ +C ++         LRS+  P+L  ++   + SL   Q   V A L  +    V
Sbjct: 68  HPLVREICRLI--------ELRSAWNPKLEGELRHLLRSLKPRQ---VCAVLQLQTDERV 116

Query: 116 ALSFFYWAIGFAKFRH-----FMRLYIVCATSL----------ISNGNFERAHEVMQCMV 160
           AL FFYWA    ++RH     +  L I+  T L          ++    ER  E    ++
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVM 176

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            S++  G+L+     +  M   G+    S  N  + +      ++ A    + M    + 
Sbjct: 177 VSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIX 236

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +  +Y  ++  YC + R+ +A   ++ M  +G   D  +   ++   C +     IK+ 
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEK---RIKEL 293

Query: 281 FELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             L+E+M++     P+  T+   +  L K G  ++A   FL+      ++ +   Y+A++
Sbjct: 294 RLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE-FLREAEERRFRVDKVGYSAIV 352

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
             +C+E +M++A+ ++  M  +G +P+  TYTS+I G C+    ++A  ++  M K GC 
Sbjct: 353 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 412

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN  +Y A+++GLCK G   EA E++  + +     + ITY++L+    ++ ++ +A  L
Sbjct: 413 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDL 472

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+K G  P       LI + C+++K+ E+++F ++ +  G       +T++I G+ +
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             ++ +A+     M      PD +TY  +I  L K+ +++EA +    M+  G  P  VT
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVT 592

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLLGK 638
             T+ ++YC+ G     + +LE +  +   RT  N +I KLCS   +  A    +KLLGK
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA----YKLLGK 648

Query: 639 DQNVDRVSLAALKNACY 655
              V R +     N C+
Sbjct: 649 ---VLRTASKIDANTCH 662



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 47/382 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V SF   GR+ +   +V EM + G      T   V+   C+   V+ A+++  +M   G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              +  SY  ++   C+ G   EA   ++   +   I +  T ++L+      GFR  G 
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLM-----HGFRREGK 465

Query: 277 IKQAFELLEEMVRKGWKP-----------------------------------NVYTHTV 301
             +A +L+ EM++KG+ P                                   NV   T 
Sbjct: 466 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTT 525

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I G C+K   E A  L   +  S N  P+V TYT +I    K+ ++  A  L  +M   
Sbjct: 526 VIHGFCQKDDLEAALSLLDDMYLS-NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           G +P   TY ++I+ +C++G  E    L++ ++ ++ C     AYN +I+ LC  G +++
Sbjct: 585 GWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQ 641

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           AY+LL K  +   + D  T  +L+  +L +     +  + CRM    L PD+     +  
Sbjct: 642 AYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSK 701

Query: 481 AFCRQKKMKESEKFFQEAITAG 502
               + K +E++K     +  G
Sbjct: 702 KLMLEGKSEEADKLILRFVERG 723


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 259/586 (44%), Gaps = 65/586 (11%)

Query: 146 NGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
           NG   RA E+++ M               ++ F +IG L     ++ E++   L     T
Sbjct: 30  NGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVIT 89

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
              ++   C+   +E A  ++DEM  + +  D  +Y  ++   C+ G+V EA      M 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           + G + +  +   LI +   +G   ++ +AF L   MV +G   +V  +T L+DGL K G
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEG---NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               A  +F +++  ++  PN  TY+A+I G+CK   +N+ E+LL+ M+E+ + PN   Y
Sbjct: 207 MANNAEDMF-QVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------------- 411
           +S++ G+ K G    A D+M  M +    PN++ Y  +IDG                   
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 412 ----------------LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
                           L + GR++EA EL K    R L  D++ YT ++    K  +   
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M +     D+ AY  LI    +  K  ESE F       GL P   T+ +MI 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMIN 444

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y ++GN+ +A+K    M   G  P++IT   L+  LC   ++++       M+  G  P
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK------KLWIRTVNTLIRKLCSEKRVGMAA 629
              T   +     K   S  A +IL   D+      KL + T NTLI   C    +  A 
Sbjct: 505 TPTTHKAVLDASSK---SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           L F  ++GK    D ++  AL +  C  S+    F+  SQ + EG+
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 237/480 (49%), Gaps = 12/480 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R+ E    ++  +   G +     ++  M   G      T N ++   C++G +  A+++
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
             E+    +  +  +Y  ++ AYC+   + +A      M  +  + D  T T ++   C 
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RSDNYK 329
            G    +++A  +  EM   G  PN +++  LID L K+G   +AF L  ++V R   + 
Sbjct: 135 SG---KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF- 190

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +V  YTA++ G  K    N AE + + + E+ L+PN  TY++LI GHCK+G+  +   L
Sbjct: 191 -DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M ++   PN+  Y++I+DG  KKG + EA ++++K  QR +  +   Y  L+  + K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   AL LF  M   GL  +     + +    R  +M+E+++ F++ ++ GL P +  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YTSM+ G+ + G  S A    Q M +     D + Y  LI+GL K  K  E+  F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRV 625
             G++P   T  T+   YCK+G+   A+ +L  + K   ++    T N L+++LC+   +
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM-KSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 219/466 (46%), Gaps = 31/466 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F + G+  + F++  EMT           N ++    +LG  E +E     M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D++++  M+ AYC+ G +  A + L+ M   G   ++ T  +L+   C  G    I+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIE 488

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +LL +M+  G+ P   TH  ++D   K    +    +  +LV     K ++ TY  +
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLV-GMGVKLDLSTYNTL 547

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS +C+   + RA ++ + M  +G+L +  TY +LI+G+C   + ++A+ +   M  EG 
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  YN ++ GL     ++EA  L+ +  +R L  +  TY IL+S H K    K+ + 
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+C M+  G  P    Y  LI+ F + KKM ++++  QE    G+ P   TY  +ICG+ 
Sbjct: 668 LYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +        K  +R           +Y A            EA + +E M  KG  PCE 
Sbjct: 728 KLSKQPELNKSLKR-----------SYQA------------EAKRLFEEMNEKGFIPCEN 764

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
           T   +++   K G  A A  IL  L KK   +TV  L+  +  E R
Sbjct: 765 TLACISFTLAKPGKKADAQRILNKLYKK---KTVQELLAGVLWESR 807


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 259/586 (44%), Gaps = 65/586 (11%)

Query: 146 NGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
           NG   RA E+++ M               ++ F +IG L     ++ E++   L     T
Sbjct: 30  NGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVIT 89

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
              ++   C+   +E A  ++DEM  + +  D  +Y  ++   C+ G+V EA      M 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           + G + +  +   LI +   +G   ++ +AF L   MV +G   +V  +T L+DGL K G
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEG---NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               A  +F +++  ++  PN  TY+A+I G+CK   +N+ E+LL+ M+E+ + PN   Y
Sbjct: 207 MANNAEDMF-QVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------------- 411
           +S++ G+ K G    A D+M  M +    PN++ Y  +IDG                   
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 412 ----------------LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
                           L + GR++EA EL K    R L  D++ YT ++    K  +   
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M +     D+ AY  LI    +  K  ESE F       GL P   T+ +MI 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMIN 444

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y ++GN+ +A+K    M   G  P++IT   L+  LC   ++++       M+  G  P
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK------KLWIRTVNTLIRKLCSEKRVGMAA 629
              T   +     K   S  A +IL   D+      KL + T NTLI   C    +  A 
Sbjct: 505 TPTTHKAVLDASSK---SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           L F  ++GK    D ++  AL +  C  S+    F+  SQ + EG+
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 237/480 (49%), Gaps = 12/480 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           R+ E    ++  +   G +     ++  M   G      T N ++   C++G +  A+++
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
             E+    +  +  +Y  ++ AYC+   + +A      M  +  + D  T T ++   C 
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RSDNYK 329
            G    +++A  +  EM   G  PN +++  LID L K+G   +AF L  ++V R   + 
Sbjct: 135 SG---KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF- 190

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +V  YTA++ G  K    N AE + + + E+ L+PN  TY++LI GHCK+G+  +   L
Sbjct: 191 -DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M ++   PN+  Y++I+DG  KKG + EA ++++K  QR +  +   Y  L+  + K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   AL LF  M   GL  +     + +    R  +M+E+++ F++ ++ GL P +  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YTSM+ G+ + G  S A    Q M +     D + Y  LI+GL K  K  E+  F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRV 625
             G++P   T  T+   YCK+G+   A+ +L  + K   ++    T N L+++LC+   +
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM-KSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 211/448 (47%), Gaps = 28/448 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F + G+  + F++  EMT           N ++    +LG  E +E     M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D++++  M+ AYC+ G +  A + L+ M   G   ++ T  +L+   C  G    I+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIE 488

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +LL +M+  G+ P   TH  ++D   K    +    +  +LV     K ++ TY  +
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLV-GMGVKLDLSTYNTL 547

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS +C+   + RA ++ + M  +G+L +  TY +LI+G+C   + ++A+ +   M  EG 
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  YN ++ GL     ++EA  L+ +  +R L  +  TY IL+S H K    K+ + 
Sbjct: 608 SPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+C M+  G  P    Y  LI+ F + KKM ++++  QE    G+ P   TY  +ICG+ 
Sbjct: 668 LYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +        K  +R           +Y A            EA + +E M  KG  PCE 
Sbjct: 728 KLSKQPELNKSLKR-----------SYQA------------EAKRLFEEMNEKGFIPCEN 764

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +++   K G  A A  IL  L KK
Sbjct: 765 TLACISFTLAKPGKKADAQRILNKLYKK 792


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 213/442 (48%), Gaps = 9/442 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ SF   GR+ +   ++ EM       + S  T N V+      G +E A ++ D M  
Sbjct: 237 LLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-R 295

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-G 275
               A A ++  ++  Y   G V +A      M + G +    T   +I       FR G
Sbjct: 296 MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM----FRSG 351

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +++ A     EM   G  P++ T+  LI+G CK G  ++A  LF  L R+    P+V TY
Sbjct: 352 NVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA-GLAPSVLTY 410

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ GYC+   +  A    + M EQG  P+ +TYT L+ G  KV N     +  D M  
Sbjct: 411 NILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLS 470

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+ +AYN  I      G   EA++L +    R + +D +TY I L    K    K 
Sbjct: 471 KGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKD 530

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L+ +MV  GL PD   YT LI A C + +++E+   F   + +GL P+  TYT  I 
Sbjct: 531 AYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIH 590

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y R GN+ SA  +FQ+M + G  P+ +TY  LI  LC+  + + A Q +  M+ +G+SP
Sbjct: 591 AYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSP 650

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
            + T   L    CK+G+   A+
Sbjct: 651 NKYTYTLLIDGNCKEGNWEEAI 672



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 238/501 (47%), Gaps = 16/501 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM ++G+P      N V+    +    +    V+ EM   G+     +Y  ++ ++ R G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 238 RVTEADRWLSAMLDR--GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           RV +A + L  M  R  G +  + T  ++I     KG    +++A +L++ M R   K +
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKG---ELEKAAQLVDRM-RMSKKAS 301

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            +T   LI G   +G  EKA  L L++  ++   P V TY  +I G  +   +  A M  
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEM-ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+  GLLP+  TY SLI G+CK GN + A  L   + + G  P++  YN ++DG C+ 
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G ++EA    ++  ++  Q D  TYTIL++   K          F  M+  GL PD  AY
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            T I+A        E+ +  +  I+ G+     TY   + G  + GN+  A   + +M  
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G  PD ITY  LI   C++ +L EA   ++ M+  G+ P  VT     + YC++G+  +
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 596 AMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
           A    + + ++  +R    T N LI  LC   R  +A   FH++L +  + ++ +   L 
Sbjct: 601 AYGWFQKMLEE-GVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659

Query: 652 NA-CYESN---KYALFSDLSQ 668
           +  C E N      L+S++ Q
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQ 680



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 202/419 (48%), Gaps = 13/419 (3%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PLIT    R        G VE A  +  EM   G+     +Y  ++    R G V  A  
Sbjct: 307 PLITGYFAR--------GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
               M   G + D  T   LI  +C  G   ++K+A  L  ++ R G  P+V T+ +L+D
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAG---NLKEALWLFGDLKRAGLAPSVLTYNILLD 415

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C+ G  E+A R   ++V     +P+V TYT +++G  K   +       + M  +GL 
Sbjct: 416 GYCRLGDLEEARRFKQEMV-EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ 474

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y + I     +G+   A+ L ++M   G + +   YN  +DGLCK G +++AY L
Sbjct: 475 PDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             K     LQ D ITYT L+  H ++   ++A  +F  M+ +GL P    YT  I A+CR
Sbjct: 535 WMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCR 594

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  +  +  +FQ+ +  G+ P + TY  +I    R G  + A ++F  M + G +P+  T
Sbjct: 595 RGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYT 654

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           Y  LI G CK+   +EA + Y  M   GI P   T   L ++   +G S  A+  +E++
Sbjct: 655 YTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNAL-FKGFDEGQSKHAIQYMENV 712



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 4/166 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++ +  E GRL+E   +   M  +GLP    T    +   C  G +  A   F +M   
Sbjct: 552 CLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEE 611

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  +  +Y +++ A CRMGR   A +    ML+RG   +  T TLLI   C +   G+ 
Sbjct: 612 GVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKE---GNW 668

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++A  L  EM + G  P+  TH  L  G   +G ++ A +    +V
Sbjct: 669 EEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 12/222 (5%)

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L  F  M   G+ P I     ++ A   + +  +    + E +  G+ P+  TY +++  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 517 YLRDGNISSAVKYFQRMNQI--GCAPDNITYGALISGLCKQSKLDEACQFYESM-IGKGI 573
           + R+G +  A K  + M     GC P ++TY  +I+GL ++ +L++A Q  + M + K  
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAAL 630
           S    T   L   Y  +G    A  +   ++ +  + TV   NT+I  +     V  A +
Sbjct: 301 S--AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 631 FFHKLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQ 668
            F ++       D ++  +L N  C   N      LF DL +
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 226/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G L + +S   EM +  +     T N ++   C+   V+ A EV   M   G
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  +V  +C  G+  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG---RCT 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G KP + T+  L+ G   KG   +   L   +VR +   PN + ++ +
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  Y K+EK+  A ++  +M++QGL PN  TY ++I   CK G  E A    + M  EG 
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P    YN++I GLC   + + A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y+TLI  +C   KM E+ K     ++ G+ P   TY+++I GY 
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +   +  A+  F+ M   G +PD ITY  ++ GL +  +   A + Y  +   G      
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELS 509

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   + +  CK   +  A+ + ++L   D KL  RT N +I  L    R   A   F
Sbjct: 510 TYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 212/464 (45%), Gaps = 45/464 (9%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL--DNATLT 262
           E A  VFDE+  RG+  D  SY +++   C   R  EA   L  M D G     D  + +
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  F  +G    + + +    EM+ +   PNV T+  +I  LCK    +KA  +   +
Sbjct: 93  TVINGFFKEG---DLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V+S    P+  TY +++ G+C   +   A + L++M+  G+ P+  TY SL+   CK G 
Sbjct: 150 VKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A  + D M K G  P I  Y  ++ G   KG + E + LL    +  +  +   ++I
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + KQ + ++A+ +F +M + GLNP+   Y  +I   C+  +++++  +F++ I  G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328

Query: 503 LFPTKETYTSMICG-----------------------------------YLRDGNISSAV 527
           L P    Y S+I G                                   + ++G +  + 
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 388

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           K F  M +IG  PD ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL   Y
Sbjct: 389 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGY 448

Query: 588 CKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           CK      A+++   +ES      I T N +++ L   +R   A
Sbjct: 449 CKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 212/447 (47%), Gaps = 11/447 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F   G+ KE    + +M ++G+     T N ++   C+ G    A ++FD M  RG
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  + ++Y  ++  Y   G + E    L  M+  G   ++   ++L+ A+  +     ++
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE---KVE 280

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  +M ++G  PN  T+  +I  LCK G  E A   F +++  +   P    Y ++
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI-DEGLSPGNIVYNSL 339

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C   K  RAE L+  M ++G+  NT  + S+I  HCK G    +  L DLM + G 
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ +IDG C  G++ EA +LL       ++ D +TY+ L++ + K +  K AL 
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALV 459

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M  +G++PDI  Y  ++    + ++   +++ +     +G      TY  ++ G  
Sbjct: 460 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++     A++ FQ +  +    +  T+  +I  L K  + DEA   + +    G+ P   
Sbjct: 520 KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 579

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK 605
           T   +A     QG       +LE LD+
Sbjct: 580 TYRLMAENIIGQG-------LLEELDQ 599



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 5/393 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H V   +V ++A+  +++E   +  +M   GL     T   V+GI C+ G
Sbjct: 254 MVRNG-IHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 312

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            VE A   F++M   G+      Y  ++   C   +   A+  +  MLDRG  L+     
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 372

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I + C +   G + ++ +L + MVR G KP++ T++ LIDG C  G  ++A +L   +
Sbjct: 373 SIIDSHCKE---GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KP+  TY+ +I+GYCK  +M  A +L   M+  G+ P+  TY  ++ G  +   
Sbjct: 430 V-SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L   + K G    +  YN I+ GLCK     +A  + +     +L+ +  T+ I
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK     +A  LF      GL P+   Y  +      Q  ++E ++ F      G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
                     ++   L+ G I+ A  Y   +++
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 641



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 5/302 (1%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAIIDGLCKKGRVQEA 421
           +P+  +Y  L+ G C     + A +L+ +M  +G  C P++ +Y+ +I+G  K+G + + 
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y    +   + +  + +TY  +++   K     +A+ +   MVK+G+ PD   Y +++  
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC   + KE+  F ++  + G+ P   TY S++    ++G  + A K F  M + G  P+
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             TYG L+ G   +  L E     + M+  GI P       L   Y KQ     AM++  
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 602 SLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            + ++       T   +I  LC   RV  A L+F +++ +  +   +   +L +     N
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 659 KY 660
           K+
Sbjct: 348 KW 349


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 243/523 (46%), Gaps = 50/523 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+L + + ++ EM + G+P   +  N V+   C+ G    A   F  +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSI 277
              D  ++ ++V A  + GRV EA +   +M      L N  T T +I   C  G    +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG---KL 152

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A ELL+ M   G  PNV T++VL++GLCK G T+K F L  ++ R   ++P+V  Y  
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNT 211

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G CK  +++ A  L++ M   G  P   TY SL+   C+    +RA+ L+ +M + G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS------------ 445
           C P++  YN +I GLC+  R+ +A  LLK+        D ITY+ ++             
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 446 ---------EHLKQA--------------------ETKQALGLFCRMVKAGLNPDIHAYT 476
                    E +KQ                     +++QAL L  RM+ + + PD+ +++
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I + C+   +  + K F         P    Y ++I G  + G +  AV+ F+ M + 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE- 450

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              P   TY +++ GLC   +++EA +  E MI K   P   +   L    C+      A
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             + ++++ K   + +   N L+ +LC +KR+  A    +KL+
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 9/357 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++   C+ G++ +A   L  M DRG     A    +I   C  G  G    A    
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGD---ALGYF 88

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           + +      P++ T  +L+D L K G  E+AF++F  +  S    PNV TYT +I+G CK
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           + K++RA  LL+ M E G  PN  TY+ L+ G CK G  ++ + L+  M + G  P++  
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +++GLCK  R+ EA EL++   +       +TY  L+    +  +  +A  L   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  PD+  Y T+IA  CR  ++ +++   ++ + A   P   TY+++I G  +D  + 
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 525 ------SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                 +A +  + M Q GC P+  TY  +I GLC+  K  +A      MI   + P
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 197/438 (44%), Gaps = 56/438 (12%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           N  L LL+ A       G   QA +L  E   +   PN +T+  LI GLCK G  ++A+ 
Sbjct: 2   NCALNLLVRA-------GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYE 51

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-------------------EMLLERM 358
           L L  +R     P V  +  +I G CK  +   A                    +L++ +
Sbjct: 52  L-LDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110

Query: 359 KEQG-----------------LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            + G                  LPN  TYT++I G CK G  +RA +L+DLM + GC PN
Sbjct: 111 VKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  Y+ +++GLCK GR  + + LL++  +R  Q D I Y  LL+   K     +AL L  
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+++G  P +  Y +L+  FCR K++  + +  Q     G  P    Y ++I G  RD 
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCK------QSKLDEACQFYESMIGKGISP 575
            +  A    ++M    C PD ITY  +I GLCK        KL+ AC+  E M   G  P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEKRVGMAALFF 632
              T   +    C+   S  A+ +L  + D ++   + + + +I  LC    +  A   F
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIF 410

Query: 633 HKLLGKDQNVDRVSLAAL 650
             +  ++   + V+ AAL
Sbjct: 411 GMMSERECKPNPVAYAAL 428



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 195/460 (42%), Gaps = 65/460 (14%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y      L  +G  +RA E++  M               V    + GR  +GF+++ EMT
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G        N ++   C+   ++ A E+   M   G      +Y  ++  +CR  +V 
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            A R +  M +RG   D      +I   C       +  A  LL++MV     P+V T++
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDA---RLDDAQALLKQMVAARCVPDVITYS 315

Query: 301 VLIDGLCKK-----GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            +IDGLCK       W  +A    L++++     PN  TY  +I G C+  K  +A  LL
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            RM +  ++P+ ++++ +I   CK  + + AY +  +M +  C PN  AY A+IDGL K 
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 416 GRVQEA---YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           G V +A   +EL+ ++F+                                       P +
Sbjct: 436 GEVDKAVRVFELMVESFR---------------------------------------PGV 456

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y +++   C   +++E+ +  +  I    FP   +Y ++I G  R   +  A + FQ 
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +   G A +   Y  L++ LCK+ +L +A      +I  G
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 264/557 (47%), Gaps = 20/557 (3%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLY-----IVCATSLISNG---------- 147
           V A L +++   VAL FF+W+    ++RH   +Y     ++  T L              
Sbjct: 53  VCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRR 112

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
             +R  +   C++ S++  G+L+    ++  M   G+       N  + +     ++E A
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
               + M   G+  +  +Y  ++  YC + RV +A   +S M  +G   D  +   ++  
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C K  R  I++  +++E+M       +  T+  LI  LCK    ++A + FL+  +   
Sbjct: 233 LC-KNRR--IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQ-FLREAQKRG 288

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           ++ +   Y+A++  YCKE +M++A+ ++  M  +G +P+  TYT++I G  + G   +A 
Sbjct: 289 FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQAR 348

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  M K GC PN  +Y A + GLC+KG   EA E++K + ++    + ITY++++   
Sbjct: 349 KMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGF 408

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++ +   A  +   M+  G  P       L+ + CR  ++ E++KF +E +  G     
Sbjct: 409 RREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNA 468

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             +T++I  + +  +I +A+     M      PD +TY  +I  L K+ +++EA +    
Sbjct: 469 VNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLK 528

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRVG 626
           M+ KGI P  VT  T+ + Y + G     + +L+ +  +   RT  N +I KLC+   + 
Sbjct: 529 MLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLE 588

Query: 627 MAALFFHKLLGKDQNVD 643
            A     K+L     +D
Sbjct: 589 AADKLLGKVLRTASRID 605



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 187/438 (42%), Gaps = 37/438 (8%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R++E   ++ +M +  L     T N ++ + C+    + A +   E   RG   D   Y 
Sbjct: 238 RIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYS 297

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V +YC+ GR+ +A   ++ M  RG I D  T T +I  F   G    + QA ++L++M
Sbjct: 298 AIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAG---EVGQARKMLQQM 354

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            + G KPN  ++T  + GLC+KG + +A R  +K      + PN  TY+ ++ G+ +E K
Sbjct: 355 YKHGCKPNTVSYTAFLKGLCQKGNSSEA-REMMKASEEQWWTPNAITYSVVMHGFRREGK 413

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  ++  M  +G  P       L+   C++G  + A   M+     GC  N   +  
Sbjct: 414 LSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTT 473

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I   C++  ++ A  LL   +      D +TYT ++    K+   ++A  L  +M+K G
Sbjct: 474 VIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKG 533

Query: 468 LNPD-------IH--------------------------AYTTLIAAFCRQKKMKESEKF 494
           ++P        IH                          A+  +I   C    ++ ++K 
Sbjct: 534 IDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKL 593

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             + +         T   ++  YLR G   SA K   RM      PD      +   L +
Sbjct: 594 LGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQ 653

Query: 555 QSKLDEACQFYESMIGKG 572
           + K +EA   +   + +G
Sbjct: 654 EGKSEEADNLFLRFVERG 671



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 161/345 (46%), Gaps = 8/345 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F++ G + +   M+ +M  +G    T +    +   C+ G    A E+      + 
Sbjct: 334 IINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQW 393

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +Y +++  + R G++++A   +  M+ +G       + LL+ + C  G    + 
Sbjct: 394 WTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIG---RVD 450

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + +EE +  G   N    T +I   C++   E A  L   +  S N  P+  TYT +
Sbjct: 451 EAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLS-NKHPDAVTYTTI 509

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEG 397
           I    K+ ++  A  L  +M ++G+ P   TY ++I+ + ++G  E   +L+D ++ ++ 
Sbjct: 510 IDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQE 569

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C     A+N +I+ LC  G ++ A +LL K  +   + D  T  +L+  +L++     A 
Sbjct: 570 CRT---AFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAY 626

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
            + CRM    L PD+     +     ++ K +E++  F   +  G
Sbjct: 627 KVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 3/227 (1%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           Q   + D I Y ++L    K    + A  +   MV+ G+      +  ++ ++ R  K++
Sbjct: 76  QWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLR 135

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +       AG+ P      + I   +    +  A+++ +RM  +G  P+ +TY  LI
Sbjct: 136 NAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLI 195

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW 608
            G C   ++++A +    M  KG SP +V+  T+    CK       M ++E + D KL 
Sbjct: 196 KGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLL 255

Query: 609 IRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              V  NTLI  LC  +    A  F  +   +   VD+V  +A+ ++
Sbjct: 256 ADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDS 302


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 267/581 (45%), Gaps = 60/581 (10%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV 176
            SFF ++I         R Y     S+   GNF  ++E        F  +  L + FS+ 
Sbjct: 16  FSFFAYSIA-------PRHYSTNTCSISVKGNFGVSNE--------FQNVKCLDDAFSLF 60

Query: 177 IEMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            +M     LP + S  ++++     +        +F E+    +        ++V + C 
Sbjct: 61  RQMVRTKPLPSVAS-FSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCL 119

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KP 294
           M R       L+    +G   +  T T LI     +     +K A  L +++VR+   +P
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAEN---KVKDAVHLFKKLVRENICEP 176

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N   +  +++GLCKKG T+KAF L L+L+   + KPN  TYT +I  +CK+  ++ A  L
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDL-LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L  MK++ + P+  TY++LI   CK+  +E    L   M      PN+  +N++IDGLCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G+V++A E+++   ++ +  D ITY +++  +  + +  +A  +F  M+   + PDI +
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355

Query: 475 YTTLIAAFCRQKKMKE-----------------------------------SEKFFQEAI 499
           Y  LI  + RQKK+ E                                   ++ FF E +
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           +AG  P   T+ +++ GY ++G +  A+ +F ++ +     +   Y A+I GLCK  KLD
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLI 616
           +A   +E +   G+ P  +T   +   YC++G    A  +L  ++    +   RT N ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           R      +V     F  ++ GK  + +  ++  L +   E 
Sbjct: 536 RGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 243/539 (45%), Gaps = 59/539 (10%)

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE 154
           +   + +  VAS +    +MV +  +   +   +  H +R+ +               HE
Sbjct: 63  MVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPV---------------HE 107

Query: 155 -VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFD 212
            ++  +V+S   + R   GFS++      G+P    T   ++ G+  E   V+ A  +F 
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAE-NKVKDAVHLFK 166

Query: 213 EMCARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++    +C  +   Y  ++   C+ G   +A   L  M       +  T T++I AFC  
Sbjct: 167 KLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKD 226

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    +  A  LL EM +K   P+++T++ LID LCK    E    LFL+++  + Y PN
Sbjct: 227 GM---LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY-PN 282

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T+ ++I G CKE K+  AE ++  M E+G+ P+  TY  +I G+   G  +RA ++ D
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFD 342

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +   P+I +YN +I+G  ++ ++ EA ++ ++  Q+ L+   +T  +LL    +  
Sbjct: 343 SMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELG 402

Query: 452 ETKQALGLFCRMVKAGLNPD-----------------------------------IHAYT 476
            TK A   F  M+ AG  PD                                   I  YT
Sbjct: 403 RTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I   C+  K+ ++   F++    GL P   TYT+MI GY ++G +  A    ++M   
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
           GC  DN TY  ++ G  + +K+ E   F E + GK  S  E   V L  +   +  S T
Sbjct: 523 GCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS-FEAATVELLMDIIAEDPSIT 580


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 243/523 (46%), Gaps = 50/523 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+L + + ++ EM + G+P   +  N V+   C+ G    A   F  +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSI 277
              D  ++ ++V A  + GRV EA +   +M      L N  T T +I   C  G    +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG---KL 152

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A ELL+ M   G  PNV T++VL++GLCK G T+K F L  ++ R   ++P+V  Y  
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNT 211

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G CK  +++ A  L++ M   G  P   TY SL+   C+    +RA+ L+ +M + G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS------------ 445
           C P++  YN +I GLC+  R+ +A  LLK+        D ITY+ ++             
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 446 ---------EHLKQA--------------------ETKQALGLFCRMVKAGLNPDIHAYT 476
                    E +KQ                     +++QAL L  RM+ + + PD+ +++
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I + C+   +  + K F         P    Y ++I G  + G +  AV+ F+ M + 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE- 450

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              P   TY +++ GLC   +++EA +  E MI K   P   +   L    C+      A
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             + ++++ K   + +   N L+ +LC +KR+  A    +KL+
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 9/357 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++   C+ G++ +A   L  M DRG     A    +I   C  G  G    A    
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGD---ALGYF 88

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           + +      P++ T  +L+D L K G  E+AF++F  +  S    PNV TYT +I+G CK
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           + K++RA  LL+ M E G  PN  TY+ L+ G CK G  ++ + L+  M + G  P++  
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +++GLCK  R+ EA EL++   +       +TY  L+    +  +  +A  L   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  PD+  Y T+IA  CR  ++ +++   ++ + A   P   TY+++I G  +D  + 
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 525 ------SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                 +A +  + M Q GC P+  TY  +I GLC+  K  +A      MI   + P
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 197/438 (44%), Gaps = 56/438 (12%)

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           N  L LL+ A       G   QA +L  E   +   PN +T+  LI GLCK G  ++A+ 
Sbjct: 2   NCALNLLVRA-------GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYE 51

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-------------------EMLLERM 358
           L L  +R     P V  +  +I G CK  +   A                    +L++ +
Sbjct: 52  L-LDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110

Query: 359 KEQG-----------------LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            + G                  LPN  TYT++I G CK G  +RA +L+DLM + GC PN
Sbjct: 111 VKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  Y+ +++GLCK GR  + + LL++  +R  Q D I Y  LL+   K     +AL L  
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+++G  P +  Y +L+  FCR K++  + +  Q     G  P    Y ++I G  RD 
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCK------QSKLDEACQFYESMIGKGISP 575
            +  A    ++M    C PD ITY  +I GLCK        KL+ AC+  E M   G  P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEKRVGMAALFF 632
              T   +    C+   S  A+ +L  + D ++   + + + +I  LC    +  A   F
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIF 410

Query: 633 HKLLGKDQNVDRVSLAAL 650
             +  ++   + V+ AAL
Sbjct: 411 GMMSERECKPNPVAYAAL 428



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 195/460 (42%), Gaps = 65/460 (14%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y      L  +G  +RA E++  M               V    + GR  +GF+++ EMT
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G        N ++   C+   ++ A E+   M   G      +Y  ++  +CR  +V 
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
            A R +  M +RG   D      +I   C       +  A  LL++MV     P+V T++
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDA---RLDDAQALLKQMVAARCVPDVITYS 315

Query: 301 VLIDGLCKK-----GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            +IDGLCK       W  +A    L++++     PN  TY  +I G C+  K  +A  LL
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            RM +  ++P+ ++++ +I   CK  + + AY +  +M +  C PN  AY A+IDGL K 
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 416 GRVQEA---YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           G V +A   +EL+ ++F+                                       P +
Sbjct: 436 GEVDKAVRVFELMVESFR---------------------------------------PGV 456

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y +++   C   +++E+ +  +  I    FP   +Y ++I G  R   +  A + FQ 
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +   G A +   Y  L++ LCK+ +L +A      +I  G
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 203/418 (48%), Gaps = 7/418 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T T LI   C    +G I QA    + +V  G++ +   +  LI GLCK G T  A  L 
Sbjct: 129 TFTTLIKGLC---LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL- 184

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L+ V  +  +PNV  Y+ +I G CK++ +N A  L   M  +G+ PN  TY++LI G   
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           VG  + A DL + M  E   P++Y +N ++DG CK G+++E   +     ++ ++ + +T
Sbjct: 245 VGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 304

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+  +    E  +A  +   M + G+NPDI +Y  LI  FC+ KK+ E+   F+E  
Sbjct: 305 YCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMH 364

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
              + P   TY S+I G  + G IS A+K    M+  G  PD ITY +++  LCK  ++D
Sbjct: 365 HKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 424

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LI 616
           +A      +  +GI P   T   L    CK G    A  I E L  K +  TVNT   +I
Sbjct: 425 KAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMI 484

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
              C++     A     K+       D V+   +  + ++ ++      L + I  G+
Sbjct: 485 HGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGL 542



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 5/318 (1%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y PN  T+T +I G C + ++++A +  + +   G   +   Y +LI+G CKVG    A 
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAAL 182

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           DL+  +      PN+  Y+ IIDG+CK   V +A++L  +   + +  + +TY+ L+S  
Sbjct: 183 DLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
               + K A+ LF +M+   + PD++ +  L+  FC+  KMKE +  F   +  G+ P  
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY S++ GY     ++ A      M+Q G  PD  +Y  LI G CK  K+DEA   ++ 
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKR 624
           M  K I P  VT  +L    CK G  + A+ +++ +  +     I T ++++  LC   +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422

Query: 625 VGMAALFFHKLLGKDQNV 642
           V  A     KL  KDQ +
Sbjct: 423 VDKAIALLTKL--KDQGI 438



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 182/360 (50%), Gaps = 6/360 (1%)

Query: 146 NGNFERAHEVM-QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           +GN  + + VM   ++    +   + + F +  EM + G+     T + ++     +G +
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A ++F++M    +  D  ++ ++V  +C+ G++ E     + M+ +G   +  T   L
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  +C       + +A  +L  M ++G  P++ ++ +LIDG CK    ++A  LF K + 
Sbjct: 309 MDGYC---LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF-KEMH 364

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
             +  P+V TY ++I G CK  K++ A  L++ M ++G+ P+  TY+S++   CK    +
Sbjct: 365 HKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 424

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +A  L+  +  +G  PN+Y Y  +IDGLCK GR+++A+ + +    +       TYT+++
Sbjct: 425 KAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMI 484

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                +    +AL L  +M      PD   Y  +I +   + +  ++EK  +E IT GL 
Sbjct: 485 HGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK-LREMITRGLL 543


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 226/460 (49%), Gaps = 6/460 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F ++ R+  GFS++ +    GL     T   ++    ++G    A E+FD+M 
Sbjct: 13  LNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV 72

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ARG   D  +Y  ++   C++G    A      M + G  L+  T + LI + C   +R 
Sbjct: 73  ARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK--YR- 129

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + +A ++   M  K   P ++T+T LI GLC    W E +    L  + S N  PNV T
Sbjct: 130 RVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEAS--ALLNEMTSLNIMPNVVT 187

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++  +CKE K+  AE +L+ M E G+ P+  TY SL+YG+        A  L D+M 
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P++++Y+ +I+G CK  R+ EA +L  +   +    + ++Y  L+    +    +
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M   G  P+++ Y  L+  FC+Q  + ++ + F+   +  L P    Y  ++
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + GN+  A + F  +  IG  P+   Y  +I+GLCK+  LDEA + + +M   G  
Sbjct: 368 NAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCP 427

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           P E +   +   + +  D + A+ ++  +  + +I    T
Sbjct: 428 PDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 201/408 (49%), Gaps = 7/408 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  +++  +C++ RV      L+  +  G      T T LI      G  G  
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGL---GKVGKF 61

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA EL ++MV +G +P+ YT+T +I+GLCK G T  A  LF K+  +   + NV TY+ 
Sbjct: 62  AQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEA-GCQLNVVTYST 120

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   CK  ++N A  +   MK + + P   TYTSLI G C    ++ A  L++ M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  +N ++D  CK+G+V  A  +LK   +  ++ D +TY  L+  +    E  +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M+  G  PD+ +Y+ LI  +C+ K++ E+++ F E I  G  P   +Y ++I G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A   F+ M+  G  P+  TY  L+ G CKQ  L +A + + +M    + P  
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSE 622
           V    L    CK G+   A  +   L     +  ++   T+I  LC E
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKE 408



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 3/296 (1%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  GL PNT T   LI   C++   +  + ++    K G  P I  +  +I+GL K G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A EL      R  Q D  TYT +++   K  ET  A GLF +M +AG   ++  Y+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI + C+ +++ E+   F       + PT  TYTS+I G         A      M  + 
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+ +T+  L+   CK+ K+  A    ++M   G+ P  VT  +L Y Y    +   A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            + + +  K     + + + LI   C  KR+  A   F++++ +    + VS   L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 231/481 (48%), Gaps = 19/481 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCAR 217
           +   F  +GR++ GF+    +   G  +    +N+++   C+   V+ A ++    M   
Sbjct: 96  LTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEF 155

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA---ILDNATLTLLITAFCDKGFR 274
           G   +  S   ++   C   RV EA   L  M + G      +  T   +I   C     
Sbjct: 156 GCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQ-- 213

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            ++ +A  +L+ M+ KG K +V T++ +IDGLCK    ++A  +   ++     KP+V T
Sbjct: 214 -AVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI-DKGVKPDVVT 271

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G CK + ++RAE +L+ M ++G+ P+  TY ++I G CK    +RA  ++  M 
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +   P+I  YN +I G    G  +E    L++ + R L  D +TY++LL    K  +  
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +F  M++ G+ P++  Y  L+  +  +  + +        +  G+ P    +  ++
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           C Y +   I  A+  F RM+Q G +PD +TYG LI  LCK  ++D+A   +  MI  G++
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-------NTLIRKLCSEKRVGM 627
           P  V   +L Y  C       A    E L  ++W + V       NT++  LC+E +V +
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKA----EELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 628 A 628
           A
Sbjct: 568 A 568



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 45/532 (8%)

Query: 168 RLKEGFSMVIEMTNNGLPLITS---TLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           R++E   ++  M  +G    T    T N ++   C+   V+ AE V   M  +GV  D  
Sbjct: 176 RVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVV 235

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++   C+   V  A+  L  M+D+G   D  T   +I   C      ++ +A  +L
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ---AVDRAEGVL 292

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY-- 342
           + M+ KG KP+V T+  +IDGLCK    ++A  +   ++  D  KP++ TY  +I GY  
Sbjct: 293 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD-VKPDIQTYNCLIHGYLS 351

Query: 343 ---------------------------------CKEEKMNRAEMLLERMKEQGLLPNTNT 369
                                            CK  K   A  +   M  +G+ PN   
Sbjct: 352 TGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y  L++G+   G      DL+DLM   G +PN Y +N ++    KK  + EA  +  +  
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           Q  L  D +TY IL+    K      A+  F +M+  G+ P+   + +L+   C   + +
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++E+ F E    G+ P    + +++C    +G +  A +    M ++G  P+ I+Y  LI
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLI 591

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
            G C   + DEA Q  + M+  G+ P  ++  TL   YCK G    A  +   + +K   
Sbjct: 592 GGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVT 651

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
               T +T+++ L   +R   A   +  ++   Q  D  +   + N   ++N
Sbjct: 652 PGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTN 703



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 6/401 (1%)

Query: 205 EYAEEV--FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           E+ E V   +EM ARG+  D  +Y L++   C+ G+ TEA +    M+ +G   +     
Sbjct: 354 EWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +L+  +     RG+I    +LL+ MV  G  PN Y   +++    KK   ++A  +F ++
Sbjct: 414 ILLHGY---AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            +     P+V TY  +I   CK  +++ A +   +M   G+ PN+  + SL+YG C V  
Sbjct: 471 SQH-GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           +E+A +L   M  +G  PN+  +N I+  LC +G+V  A  L+    +  ++ + I+Y  
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H     T +A  L   MV  GL PD+ +Y TL+  +C+  ++  +   F+E +  G
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY++++ G       S A + +  M + G   D  TY  +++GLCK + +DEA 
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           + ++S+  K + P  +T   +     K G    AM +  S+
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 211/484 (43%), Gaps = 39/484 (8%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  +   G  KE    + EM   GL     T + ++   C+ G    A ++F  M  
Sbjct: 343 NCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIR 402

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  + + Y +++  Y   G + +    L  M+  G   +N    +++ A+  K     
Sbjct: 403 KGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM--- 459

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +A  +   M + G  P+V T+ +LID LCK G  + A   F +++ +D   PN   + 
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI-NDGVTPNSVVFN 518

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNT---NT------------------------ 369
           +++ G C  ++  +AE L   M +QG+ PN    NT                        
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578

Query: 370 --------YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
                   Y +LI GHC  G  + A  L+D+M   G  P++ +Y+ ++ G CK GR+  A
Sbjct: 579 GVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNA 638

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y L ++  ++ +    +TY+ +L          +A  L+  M+K+G   DI+ Y  ++  
Sbjct: 639 YCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNG 698

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+   + E+ K FQ   +  L P   T+T MI    + G    A+  F  +   G  P+
Sbjct: 699 LCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPN 758

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  ++  + ++  LDE    + +M   G +P  V    +      +G+   A   L 
Sbjct: 759 VVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLS 818

Query: 602 SLDK 605
            +D+
Sbjct: 819 KIDE 822



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 196/408 (48%), Gaps = 5/408 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +++NG     + +   ++ ++A+   + E   +   M+ +GL     T   ++   C+LG
Sbjct: 435 MVANG-ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   GV  ++  +  +V   C + R  +A+     M D+G       + 
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV---RPNVV 550

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
              T  C+    G +  A  L++ M R G +PNV ++  LI G C  G T++A +L L +
Sbjct: 551 FFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL-LDV 609

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S   KP++ +Y  ++ GYCK  +++ A  L   M  +G+ P   TY++++ G      
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M K G   +IY YN I++GLCK   V EA+++ +    ++L+ + IT+TI
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K    K A+ LF  +   GL P++  Y  ++    ++  + E +  F     +G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             P      ++I   L  G I  A  Y  +++++  + +  T   LIS
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 10/350 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V     + R ++   +  EM + G+       N ++   C  G V  A+ + D M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  +  SY  ++  +C  GR  EA + L  M+  G   D  +   L+  +C  G  
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTG-- 633

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A+ L  EM+RKG  P   T++ ++ GL       +A  L+L +++S   + +++T
Sbjct: 634 -RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS-GQQWDIYT 691

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +++G CK   ++ A  + + +  + L PN  T+T +I    K G  + A DL   + 
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIP 751

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  PN+  Y  ++  + ++G + E   L     +     D +    ++   L + E  
Sbjct: 752 SHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIM 811

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ------KKMKESEKFFQEA 498
           +A     ++ +   + +    + LI+ F R+      K + E   F +E 
Sbjct: 812 RAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEKYLFLEEV 861



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE- 423
           P+  TY+ L    C++G  E  +    L+ K G   N    N +++GLC   RV EA + 
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG---LNPDIHAYTTLIA 480
           LL++  +     + ++   LL     +   ++AL L   M + G     P++  Y T+I 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+ + +  +E   Q  I  G+     TY+++I G  +   +  A    Q M   G  P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D +TY  +I GLCK   +D A    + MI KG+ P  VT  T+    CK      A  +L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 601 ESL---DKKLWIRTVNTLI 616
           + +   D K  I+T N LI
Sbjct: 328 QHMIDKDVKPDIQTYNCLI 346



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 33/204 (16%)

Query: 451 AETKQALGLFCRMVKAGLN---PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           + ++ A+ LF RM +A  N   PD+  Y+ L   FCR  +++     F   +  G    +
Sbjct: 66  STSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNE 125

Query: 508 ETYTSMICGYLRDGNISSAVK-YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
                ++ G      +  A+    +RM + GC P+ ++   L+ GLC + +++EA +   
Sbjct: 126 VVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLH 185

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
           +M   G   C    VT                              NT+I  LC  + V 
Sbjct: 186 TMAEDGGGNCTPNVVTY-----------------------------NTIIDGLCKAQAVD 216

Query: 627 MAALFFHKLLGKDQNVDRVSLAAL 650
            A      ++ K   +D V+ + +
Sbjct: 217 RAEGVLQHMIDKGVKLDVVTYSTI 240


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 206/398 (51%), Gaps = 14/398 (3%)

Query: 162 SFAEIGRL------KEGFSMVIEMTNN----GLPLITSTLNRVVGIACELGLVEYAEEVF 211
           SF E+G+       K+ +S V+ + N     G+     TLN ++   C L  + +A  V 
Sbjct: 85  SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            +M   G+  D+ ++  ++   C  GR+ EA    + M  R A+ +  T T+L+   C K
Sbjct: 145 SKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK 204

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    + +A  + E M  KG +PN+YT+  L++G C +     A ++F +++      P+
Sbjct: 205 GM---VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF-EIMVGKGCAPS 260

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           VH+Y+ +I+GYCK  +++ A+ LL +M E+ L+PNT TY +L+ G C   +   A +L  
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  PN+  Y+ ++DGLCK G ++EA +LL    +R+L+ D + Y IL+       
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAG 380

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + + A  LF ++   G+ P +  Y  +I    ++    E+ K F++    G  P   +Y 
Sbjct: 381 KLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYN 440

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +I G+L++ + S+A++    M     + D+ T+  L+
Sbjct: 441 VIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 183/363 (50%), Gaps = 4/363 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   GV  +  +  +++ + CR+  +  A   LS M   G   D+ T T LI   C++
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNE 169

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    IK+A EL  EM  +   PN  T T+L+D LCKKG   +A R   + +     +PN
Sbjct: 170 G---RIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEA-RCVFETMTEKGVEPN 225

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           ++TY A+++GYC   +MN A  + E M  +G  P+ ++Y+ LI G+CK    + A  L+ 
Sbjct: 226 IYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLT 285

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M ++   PN   YN ++ GLC    + EA EL KK     +  +  TY+ILL    K  
Sbjct: 286 QMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             ++AL L   M +  L PDI  Y  LI       K++ +++ F +    G+ P+  TY 
Sbjct: 346 HLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYN 405

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G L++G    A K F++M   G  PD+ +Y  +I G  +      A Q  + M+G+
Sbjct: 406 IMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGR 465

Query: 572 GIS 574
             S
Sbjct: 466 RFS 468



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 175/351 (49%), Gaps = 4/351 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   ++ TL +LI + C       I  A  +L +M + G +P+  T T LI+GLC +G  
Sbjct: 116 GVAHNDYTLNILINSLCR---LSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRI 172

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++A  LF ++   D   PN  T+T ++   CK+  ++ A  + E M E+G+ PN  TY +
Sbjct: 173 KEAVELFNEMAGRDAM-PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNA 231

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+ G+C       A  + ++M  +GC P++++Y+ +I+G CK  R+ EA  LL +  ++E
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L  + +TY  L+      +   +A  LF +M  +G+ P++  Y+ L+   C+   ++E+ 
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K         L P    Y  +I G    G +  A + F ++   G  P   TY  +I GL
Sbjct: 352 KLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            K+   DEA + +  M   G  P   +   +   + +  D +TA+ +++ +
Sbjct: 412 LKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 182/394 (46%), Gaps = 11/394 (2%)

Query: 267 AFCDKG-FRGSIKQ------AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +F + G F GSI +         L  +M   G   N YT  +LI+ LC+      A  + 
Sbjct: 85  SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            K+ +    +P+  T+T +I+G C E ++  A  L   M  +  +PNT T+T L+   CK
Sbjct: 145 SKMFKL-GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G    A  + + M ++G  PNIY YNA+++G C +  + +A ++ +    +       +
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+IL++ + K     +A  L  +M +  L P+   Y TL+   C    + E+++ F++  
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           ++G+ P   TY+ ++ G  + G++  A+K    M +    PD + Y  LI G+    KL+
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLI 616
            A + +  +   GI P   T   +     K+G S  A  +   ++   ++    + N +I
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVII 443

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +     +    A     +++G+  + D  +   L
Sbjct: 444 QGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKML 477



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 208/486 (42%), Gaps = 39/486 (8%)

Query: 29  SLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSM--------VLESYYQQFHLR 80
           S  +  HHH    N+     S+ +  PS PQ+    V +          + S+Y+  H+ 
Sbjct: 30  SFLFSNHHH---LNT-----STCTKKPSLPQNNGGFVSNNSNDIGIDDAMASFYRMIHMN 81

Query: 81  SSPPRLNLQIDIDSLTHEQAITVVASLANEAGSM-VALSFFYWAI---GFAKFRHFMRLY 136
             P  + L   + S+  ++  + V SL N+     VA + +   I      +  H    +
Sbjct: 82  PRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIH--F 139

Query: 137 IVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
            V   S +     +        +++     GR+KE   +  EM        T T   +V 
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVD 199

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           + C+ G+V  A  VF+ M  +GV  +  +Y  ++  YC    + +A +    M+ +G   
Sbjct: 200 VLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAP 259

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
              + ++LI  +C K  R  I +A  LL +M  K   PN  T+  L+ GLC      +A 
Sbjct: 260 SVHSYSILINGYC-KSRR--IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            LF K+  S    PN+ TY+ ++ G CK   +  A  LL  M+E+ L P+   Y  LI G
Sbjct: 317 ELFKKMC-SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQG 375

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
               G  E A +L   +   G  P++  YN +I GL K+G   EAY+L +K        D
Sbjct: 376 MFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPD 435

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNP---------DIHAYTTLIAAFCRQ-- 485
             +Y +++   L+  +   A+ L   MV    +          D+ ++  +I+ F R+  
Sbjct: 436 SCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHDEIISRFMRESS 495

Query: 486 --KKMK 489
             +KMK
Sbjct: 496 QIRKMK 501



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N +P+       +    K+++ +    L  +M   G+  N  T   LI   C++ +   A
Sbjct: 81  NPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFA 140

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++  M K G  P+   +  +I+GLC +GR++EA EL  +   R+   + +T+TIL+  
Sbjct: 141 VSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDV 200

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+    +A  +F  M + G+ P+I+ Y  L+  +C + +M ++ K F+  +  G  P+
Sbjct: 201 LCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPS 260

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y+ +I GY +   I  A     +M++    P+ +TY  L+ GLC  S L EA + ++
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEK 623
            M   G+ P   T   L    CK G    A+ +L S+ ++KL    V  N LI+ +    
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAG 380

Query: 624 RVGMAALFFHKLLG 637
           ++ +A   F KL  
Sbjct: 381 KLEVAKELFSKLFA 394



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 5/135 (3%)

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           D  I  A+  F RM  +   P  +  G  +  + K+ +          M   G++  + T
Sbjct: 64  DIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKL 635
              L    C+      A+ +L  +  KL I+    T  TLI  LC+E R+  A   F+++
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKM-FKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 636 LGKDQNVDRVSLAAL 650
            G+D   + V+   L
Sbjct: 183 AGRDAMPNTVTFTIL 197


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 245/514 (47%), Gaps = 23/514 (4%)

Query: 54  SPSPPQSLVKT-VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASL----- 107
           S SP ++L KT      + ++++  HL   P  ++L   + S+   +    V SL     
Sbjct: 23  SHSPRKTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLD 82

Query: 108 --ANEAGSMVALSFFYWAIGFAKFRHF--MRLYIVCATSLISNGNFERAHEVMQCMVSSF 163
                  S+V LS F  ++      H   M L       ++  G F      +  ++   
Sbjct: 83  SKGTPKPSLVTLSIFINSL-----THLGQMGLAFSVMAKIVKRG-FGVDPFTLTTLMKGL 136

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
              GR  E  ++     + G          ++   C++G    A E+  +M   GV  + 
Sbjct: 137 CLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNL 196

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-FRGSIKQAFE 282
             Y ++V   C+ G VTEA    S M+ +G  +D  T   LI  FC  G F+G+++    
Sbjct: 197 IMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVR---- 252

Query: 283 LLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           LL EMV K   +P+VYT  +L+D LCK G   +A  +F  +++    +P+V +  A+++G
Sbjct: 253 LLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKR-GLEPDVVSCNALMNG 311

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           +C    M+ A+ + +RM E+G LPN  +Y++LI G+CKV   + A  L+  M +    P+
Sbjct: 312 WCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPD 371

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YN ++DGL K GRV   ++L++         D ITY +LL ++LK+    +AL LF 
Sbjct: 372 TVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQ 431

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            +V  G++P+I  Y  LI   C+  +MK +++ FQ     G  P   TY  MI G  R+G
Sbjct: 432 HIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            +  A      M   G  P+ +T+  L+  L ++
Sbjct: 492 LLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 227/468 (48%), Gaps = 8/468 (1%)

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG 172
           S+V+L+    +I   K +H+  +  +C+  L S G  + +   +   ++S   +G++   
Sbjct: 54  SIVSLNKLLSSI--MKTKHYPTVVSLCS-HLDSKGTPKPSLVTLSIFINSLTHLGQMGLA 110

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           FS++ ++   G  +   TL  ++   C  G    A  ++D   ++G   D   Y  ++  
Sbjct: 111 FSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLING 170

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            C+MG+  +A   L  M ++G +  N  +  +++   C +G    + +A  L  EMV KG
Sbjct: 171 LCKMGKTRDAIELLRKM-EKGGVRPNLIMYNMVVDGLCKEGL---VTEACGLCSEMVGKG 226

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
              +V+T+  LI G C  G  + A RL  ++V  ++ +P+V+T+  ++   CK   +  A
Sbjct: 227 ICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEA 286

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +   M ++GL P+  +  +L+ G C  G    A ++ D M + G  PN+ +Y+ +I+G
Sbjct: 287 RNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLING 346

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK   V EA  LL +  QR L  D +TY  LL    K         L   M  +G  PD
Sbjct: 347 YCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPD 406

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y  L+  + +++ + ++   FQ  +  G+ P   TY  +I G  + G + +A + FQ
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQ 466

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            ++  GC P+  TY  +I+GL ++  LDEA      M+  G  P  VT
Sbjct: 467 LLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 191/391 (48%), Gaps = 8/391 (2%)

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           +G++  A   ++ ++ RG  +D  TLT L+   C    +G   +A  L +  V KG+  +
Sbjct: 104 LGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLC---LKGRTFEALNLYDHAVSKGFSFD 160

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
              +  LI+GLCK G T  A  L  K+ +    +PN+  Y  ++ G CKE  +  A  L 
Sbjct: 161 EVCYGTLINGLCKMGKTRDAIELLRKMEKG-GVRPNLIMYNMVVDGLCKEGLVTEACGLC 219

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCK 414
             M  +G+  +  TY SLI+G C  G F+ A  L++ ++ KE   P++Y +N ++D LCK
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK 279

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G V EA  +     +R L+ D ++   L++    +    +A  +F RMV+ G  P++ +
Sbjct: 280 LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+TLI  +C+ K + E+ +   E     L P   TY  ++ G  + G +       + M 
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMR 399

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G APD ITY  L+    K+  LD+A   ++ ++  GISP   T   L    CK G   
Sbjct: 400 ASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMK 459

Query: 595 TAMIILESLDKK---LWIRTVNTLIRKLCSE 622
            A  I + L  K     IRT N +I  L  E
Sbjct: 460 AAKEIFQLLSVKGCRPNIRTYNIMINGLRRE 490



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 4/220 (1%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +T +I ++      +   A  +  ++VK G   D    TTL+   C + +  E+   +  
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A++ G    +  Y ++I G  + G    A++  ++M + G  P+ I Y  ++ GLCK+  
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVN 613
           + EAC     M+GKGI     T  +L + +C  G    A+ +L  +  K  +R    T N
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            L+  LC    V  A   F  ++ +    D VS  AL N 
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNG 311


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 192/361 (53%), Gaps = 4/361 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        ++  F    R+++  ++  ++   G      T   ++   C+   + +A 
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+F++M   G+  +  +Y  +V   C +GR ++A   L  M+ RG   +  T T LI AF
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    I +A EL + M++    P+V+T+T LI+GLC  G  ++A ++F  L+ S+ Y
Sbjct: 268 VKVG---KIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFY-LMESNGY 323

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN  TYT +I G+CK +++     +   M ++GL+ NT TYT LI G+C VG  + A +
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + MG     P+I  YN ++DGLC  G V++A  + K   +RE+  + +TYTI++    
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC 443

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + + A  LFC +   G+ P++  YTT+I+ FCR+  + E++  F++    G  P + 
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503

Query: 509 T 509
            
Sbjct: 504 V 504



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 220/475 (46%), Gaps = 33/475 (6%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI 177
            F +W   F+ +R  +R       + + N  F  A ++   MV S               
Sbjct: 39  GFCFWIRAFSNYRKILR-------NGLHNLQFNEALDLFTRMVHS--------------- 76

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
                 LP I     R++ +  ++   +    +F++M   G+     +  +++   CR  
Sbjct: 77  ----RPLPSIVD-FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +   A  +L  M+  G   D  T T L+  FC       I+ A  L +++V  G++PNV 
Sbjct: 132 QPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCH---WNRIEDALALFDQIVGMGFRPNVV 188

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDN-YKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           T+T LI  LCK      A  +F ++   DN  +PNV TY +++SG C+  + + A  LL 
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQM--GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLR 246

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M ++G+ PN  T+T+LI    KVG    A +L  +M +    P+++ Y A+I+GLC  G
Sbjct: 247 DMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG 306

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R+ EA ++           +++TYT L+    K    +    +F  M + GL  +   YT
Sbjct: 307 RLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYT 366

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI  +C   +   +++ F +  +    P   TY  ++ G   +G +  A+  F+ M + 
Sbjct: 367 VLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
               + +TY  +I G+CK  K+++A   + S+  KG+ P  +T  T+   +C++G
Sbjct: 427 EMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 481



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 4/371 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G  P +YT  ++++ +C+     +A   FL  +    ++P++ T+T+++ G+
Sbjct: 104 LFEQMQILGISPVLYTCNIVMNCVCRSSQPCRA-SCFLGKMMKLGFEPDLVTFTSLLHGF 162

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C   ++  A  L +++   G  PN  TYT+LI+  CK  +   A ++ + MG  G  PN+
Sbjct: 163 CHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNV 222

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN+++ GLC+ GR  +A  LL+   +R +Q + IT+T L+   +K  +  +A  L+  
Sbjct: 223 VTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV 282

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++  + PD+  YT LI   C   ++ E+ + F    + G +P + TYT++I G+ +   
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +    K F  M+Q G   + ITY  LI G C   + D A + +  M  +   P   T   
Sbjct: 343 VEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNV 402

Query: 583 LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L    C  G    A++I + + K+   + I T   +I+ +C   +V  A   F  L  K 
Sbjct: 403 LLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG 462

Query: 640 QNVDRVSLAAL 650
              + ++   +
Sbjct: 463 MKPNVITYTTM 473



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 34/350 (9%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L +GL    + E A  LF ++V S    P++  +T ++S   K ++ +    L E+M+ 
Sbjct: 53  ILRNGLHNLQFNE-ALDLFTRMVHSRPL-PSIVDFTRLLSVIAKMKRFDVVISLFEQMQI 110

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+ P   T   ++   C+     RA   +  M K G  P++  + +++ G C   R+++
Sbjct: 111 LGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIED 170

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  L  +      + + +TYT L+    K      A+ +F +M   G+ P++  Y +L++
Sbjct: 171 ALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVS 230

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C   +  ++    ++ +  G+ P   T+T++I  +++ G I  A + ++ M Q+   P
Sbjct: 231 GLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYP 290

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D  TY ALI+GLC   +LDEA Q +  M   G  P EVT                     
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT--------------------- 329

Query: 601 ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                        TLI   C  KRV      F+++  K    + ++   L
Sbjct: 330 -----------YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/258 (18%), Positives = 90/258 (34%), Gaps = 73/258 (28%)

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  +L   L   +  +AL LF RMV +   P I  +T L++   + K+            
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRF----------- 98

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA-------------------- 539
                                      +  F++M  +G +                    
Sbjct: 99  ------------------------DVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPC 134

Query: 540 ---------------PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
                          PD +T+ +L+ G C  +++++A   ++ ++G G  P  VT  TL 
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLI 194

Query: 585 YEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
           +  CK      A+ I   +     +  + T N+L+  LC   R   AA     ++ +   
Sbjct: 195 HCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254

Query: 642 VDRVSLAALKNACYESNK 659
            + ++  AL +A  +  K
Sbjct: 255 PNVITFTALIDAFVKVGK 272


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 216/437 (49%), Gaps = 10/437 (2%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F  M   G   +  +Y  ++ A+C++  + +A   L  M + G   D  T   L+   C 
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 271 KGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            G    +  A  L  +M R+ G   + Y++T+LI GLC  G  + A R+F K+ R    +
Sbjct: 138 AGL---LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRG-WCR 193

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P VHTYT ++ G CK  ++  AE LL  M  +G++PN  TY +LI G C+ G F+    L
Sbjct: 194 PGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKL 253

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M  +  +P+ + Y  ++ GLCK G+V    ++L +A  + +  + +TY  L++ + K
Sbjct: 254 LEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCK 313

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K AL +   M +  +NP +  +  +I  FC   K+ ++  F  +   AGL P   T
Sbjct: 314 GGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVT 373

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           + S+I G    G    A++    M + G  PD  TY   I  LC + +L+EA   +  + 
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLP 433

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
            KGI    V   +L + YC+ GD  +A  ++E +  +     + T NTLI  LC  KR+ 
Sbjct: 434 MKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLD 493

Query: 627 MAALFFHKLLGKDQNVD 643
            A     K+  K Q ++
Sbjct: 494 RAIDLLDKM--KKQGIE 508



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 218/468 (46%), Gaps = 15/468 (3%)

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCR 235
           + M   GL   T T N ++   C  GL+  A  +F +M  R G C D  SY +++   C 
Sbjct: 114 VRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCA 173

Query: 236 MGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
            GR+ +A R  + M  RG       T T+L+   C K  R  + +A  LL EMV KG  P
Sbjct: 174 AGRIDDACRVFAKM-SRGWCRPGVHTYTVLLDGLC-KVRR--VGEAEALLGEMVNKGVVP 229

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV T+  LI GLC++G  +   +L  K+     + P+  TYT ++ G CK  K+     +
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKM-EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L     +G+     TY +LI G+CK G+ + A D++ LM +    P +  +N +I G C 
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G+V +A   L +     L  + +T+  L+S      E K AL L   M + G+ PD   
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y   I A C + +++E+   F      G+      YTS++ GY + G+I SA    ++M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
              C PD  TY  LI GLCK  +LD A    + M  +GI P   T   L  +       A
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHA 528

Query: 595 TAMIILESL-------DKKLWIRTVNT-LIRKLCSEKRVGMAALFFHK 634
            A  + E +       DK+ +   ++T        E+ + MA +  H+
Sbjct: 529 DAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE 576



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 234/522 (44%), Gaps = 59/522 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++ R+ E  +++ EM N G+     T N ++G  C+ G  +   ++ ++M  + 
Sbjct: 202 LLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V   C+ G+V    + L   + +G  L+  T   LI  +C KG  G +K
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC-KG--GDMK 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++L+ M R    P V T   +I G C  G   KA   FL  +      PN  T+ ++
Sbjct: 319 AALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA-FLTQMAGAGLSPNTVTFNSL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY---------------------------- 370
           ISG C   +   A  LL+ M+E G+LP+  TY                            
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 371 -------TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                  TSL++G+C+VG+ + A+ LM+ M  E C P+++ YN +IDGLCK  R+  A +
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL K  ++ ++    T+ IL+ + L   +   A  ++ +M+ +G  PD   YT  I+   
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557

Query: 484 RQKKMKES--EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            +   KE   +    E   AG+FP  ETY ++I  Y+  G    A     +M  +   PD
Sbjct: 558 FEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             TY  L++ +C +   D++  F    I K +   +V  +   +E   + D+A       
Sbjct: 618 CTTYSILLNYMCNK---DDSDAFDNEKIWKMV---DVRNLQELFEQMCESDAAPG----- 666

Query: 602 SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
                  I T   L+R LC++ R+        K+ G    +D
Sbjct: 667 -------ISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLD 701



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 213/513 (41%), Gaps = 58/513 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G +K    ++  M  N +     T N V+   C  G V  A     +M   G
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C +G    A R L  M + G + D  T  + I A CD+G    ++
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEG---QLE 423

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L   +  KG K +   +T L+ G C+ G  + AF L  K+  S+N  P+VHTY  +
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA-SENCMPDVHTYNTL 482

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNT--------------------YTSLIYGHC 378
           I G CK ++++RA  LL++MK+QG+ P T T                    Y  +I   C
Sbjct: 483 IDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGC 542

Query: 379 KVGN-----------FERAY--DLMDL----MGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           K              FE A   + +D+    M + G  P++  YNAII      G  ++A
Sbjct: 543 KPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA 602

Query: 422 YELLKKAFQRELQADKITYTILLS--------------EHLKQAETKQALGLFCRMVKAG 467
           +    K     +  D  TY+ILL+              +  K  + +    LF +M ++ 
Sbjct: 603 FFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESD 662

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P I  Y  L+   C Q +++E E    +     +   ++    ++  Y        A 
Sbjct: 663 AAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREAC 722

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F+ M      P   +   L+SGLC       A   +  M+G G +  EV    L    
Sbjct: 723 EQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782

Query: 588 CKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
            ++G +   + +L  +D K  +   RT  +L+R
Sbjct: 783 HEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA----DKITYTILLSEHLKQAETKQA 456
           ++ ++NA +     +G        L  +F   L++    ++ TY  L++ H K A    A
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF-QEAITAGLFPTKETYTSMIC 515
                RM +AGL PD   Y  L+   CR   +  +   F Q     G    + +YT +I 
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G    G I  A + F +M++  C P   TY  L+ GLCK  ++ EA      M+ KG+ P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLD-----KKLWIRTVNTLIRKLCSEKRVGMAAL 630
             VT   L    C++G       +LE ++        W  T   ++  LC   +VG  A 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW--TYTQVVHGLCKHGKVGHGAK 287

Query: 631 FFHKLLGKDQNVDRVSLAALKNA 653
             H+ +GK   ++ ++  AL N 
Sbjct: 288 VLHEAIGKGVALEVLTYNALING 310



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/376 (19%), Positives = 146/376 (38%), Gaps = 70/376 (18%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +   +L   G  E AH +  C+               V  + ++G +   F ++ +M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV----C---------------A 221
           +        T N ++   C++  ++ A ++ D+M  +G+    C               A
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHA 528

Query: 222 DASS-YKLMVVAYCRMGRVT-----------------EADRWLSAMLDRGAILDNATLTL 263
           DA+  Y+ M+ + C+  + T                   D  +  M + G   D  T   
Sbjct: 529 DAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNA 588

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG----------WTE 313
           +I A+ D G +   ++AF    +M+     P+  T+++L++ +C K           W  
Sbjct: 589 IIKAYVDAGLK---EKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKM 645

Query: 314 KAFR----LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              R    LF ++  SD   P + TY A++ G C + ++   E LL +M+   +L + + 
Sbjct: 646 VDVRNLQELFEQMCESDA-APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDM 704

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
              L+  +C +  +  A +    M  +   P + +   ++ GLC  G    A  +     
Sbjct: 705 SDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDML 764

Query: 430 QRELQADKITYTILLS 445
                 D++ + +L+ 
Sbjct: 765 GLGYNYDEVVWKLLID 780



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 33/215 (15%)

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L  F  M+K+G  P+   Y TLI A C+   + ++         AGL P   TY  ++ G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 517 YLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             R G +++A   F +M  + G   D  +Y  LI GLC   ++D+AC+ +  M       
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM------- 187

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                   +  +C+ G                 + T   L+  LC  +RVG A     ++
Sbjct: 188 --------SRGWCRPG-----------------VHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           + K    + V+  AL     +  ++   + L +++
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 199/392 (50%), Gaps = 12/392 (3%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P   +  NR+V   C  G  + AE V     A G  A   +Y  +   YCR GR+ +A R
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVVG---ACGPAATVVAYGALTDGYCRAGRLGDARR 156

Query: 245 WLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
            +  M     +  NA T   LI   C+   RG ++ A  +L++M+ +G  P+V T+ +L+
Sbjct: 157 VVGGM----PVQPNAYTYNPLIHTLCE---RGQVRDALSVLDDMLCRGCAPDVVTYNILL 209

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           +  CK     +A  L + L+R++   PN  TY  ++ G C E  ++ A  LL  +   G 
Sbjct: 210 EATCKGRGYRQAMEL-IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGC 268

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+T  Y +++ G C    +  A +L+  M +E C PN   +N +I  LC+KG +Q+A +
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 328

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL+K  +    A+ +TY  +++   +Q     A+GL  +M   G  PDI  Y TL+   C
Sbjct: 329 LLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLC 388

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              +  ++E+        G  P   T+ ++I    + G +  A++ F++M   GC P++I
Sbjct: 389 SAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 448

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           TY  +ISGL K +KLD+A + +  M  KG +P
Sbjct: 449 TYSTIISGLAKATKLDQALELFNEMGHKGFNP 480



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 219/486 (45%), Gaps = 29/486 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +   +   GRL +   +V      G+P+  +  T N ++   CE G V  A  V D+M  
Sbjct: 141 LTDGYCRAGRLGDARRVV-----GGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLC 195

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG   D  +Y +++ A C+     +A   +  M   G   +N T  +L+   C +   G 
Sbjct: 196 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGE---GD 252

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A ELL  +   G KP+   +  ++ GLC       A  L  +++R +N  PN  T+ 
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR-ENCPPNEATFN 311

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   C++  + +A  LLE+M + G   N  TY ++I G C+  N + A  L+  M   
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P+I  YN ++ GLC   +  +A EL+    Q     D +T+  L+    ++     A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + +F +M   G  P+   Y+T+I+   +  K+ ++ + F E    G  P K  Y  +   
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAEC 490

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
              D  I  A++  +++   G +P  + Y A++ GLC+  K + A      M+  G  P 
Sbjct: 491 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMP- 549

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
                          D  T +I++E L  + ++     L+ KLCS + V + +L   + L
Sbjct: 550 ---------------DDLTYVILIEGLAYEGYLNEARELLIKLCS-RDVLVNSLIKSEAL 593

Query: 637 GKDQNV 642
             DQN+
Sbjct: 594 LLDQNI 599



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 192/420 (45%), Gaps = 18/420 (4%)

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLIT-------AFCDKGFRGSIKQAFELLEEMVRK 290
           R+  +DR LSA++ RG +  +A L L+ +       A  ++  R   ++      E V  
Sbjct: 70  RLLGSDRRLSALVHRGDL--DAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVG 127

Query: 291 GWKP--NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
              P   V  +  L DG C+ G    A R+    V     +PN +TY  +I   C+  ++
Sbjct: 128 ACGPAATVVAYGALTDGYCRAGRLGDARRV----VGGMPVQPNAYTYNPLIHTLCERGQV 183

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  +L+ M  +G  P+  TY  L+   CK   + +A +L+DLM  EGCTPN   YN +
Sbjct: 184 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 243

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +DG+C +G V +A ELL+       +   + Y  +L           A  L   M++   
Sbjct: 244 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 303

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P+   +  +I + CR+  ++++ +  ++    G      TY ++I G     N+  A+ 
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              +M   GC PD +TY  L+ GLC  ++  +A +  ++M   G  P  VT  TL    C
Sbjct: 364 LLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLC 423

Query: 589 KQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           ++G    A+ + + +  K       T +T+I  L    ++  A   F+++  K  N D++
Sbjct: 424 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI 483


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 246/520 (47%), Gaps = 10/520 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++ S+ + G + E FS+   M  +G P    T   ++   C+ G +  A+E    +  
Sbjct: 459 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 518

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +    D  +   ++V  C+ G + EA      M+ R  + D  T T+L+  FC    RG 
Sbjct: 519 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK---RGK 575

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  LL+ M+ KG  P+   +T L++GL  +G  + A  +F +++  +    +   Y 
Sbjct: 576 VVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 635

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +M++GY K  ++N  E L+  M E  + P++ +Y  L++G+ K G   R   L   M KE
Sbjct: 636 SMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 695

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+   Y  +I GLC+ G ++ A + L+K     +  D + + IL+    ++++   A
Sbjct: 696 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNA 755

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L LF  M    ++P    Y  ++    R+  +++S +   + + +GL P    Y ++I  
Sbjct: 756 LQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINA 815

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R G+I  A +  + M  +G  P  +   +++ GLCK  K++EA   + S++  G+ P 
Sbjct: 816 KCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 875

Query: 577 EVTRVTLAYEYCKQ---GDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
             T  TL +  CK+    D+     ++ES   K+ + T N LI  LC++K +  A   + 
Sbjct: 876 IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 935

Query: 634 KLLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           ++  K    +  +   L  A Y +    +   L  D+  R
Sbjct: 936 EMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 975



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 225/496 (45%), Gaps = 55/496 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S    G+L +  SM+ +M N  LP    T N ++    + G  + A  + D+M   G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y +M+   C++ R   A   L  M +     D  +   LI  F  +G    I 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG---KIN 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF------------------- 319
            A  +  +M+R+  KP+V T+T LIDG C+ G T++A R+                    
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQI 411

Query: 320 LKLVRSDNYKPNVHTYTAMIS-------------------------------GYCKEEKM 348
           LK + +D   P+V TY+A+I+                                YC+   +
Sbjct: 412 LKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV 471

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  + + M   G  P+  TY SL+ G C+ G+  +A + M  + ++ C  +    N +
Sbjct: 472 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 531

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           + G+CK G + EA +L +K   R +  D  TYTILL    K+ +   AL L   M++ GL
Sbjct: 532 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 591

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAV 527
            PD  AYT L+     + ++K +   FQE I   GL+     Y SM+ GYL+ G I+   
Sbjct: 592 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 651

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  + M++    P + +Y  L+ G  K+ +L      Y  M+ +GI P  VT   L +  
Sbjct: 652 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 711

Query: 588 CKQGDSATAMIILESL 603
           C+ G    A+  LE +
Sbjct: 712 CEYGLIEIAVKFLEKM 727



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 233/485 (48%), Gaps = 29/485 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+++ + G++ +  + +  M   G      + N ++     +   EY      E   R 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSI 277
              D ++  +++ + C  G++++A+  L  M  +   L NA T   ++  +  KG     
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKG---RC 280

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A  +L++M + G + ++YT+ ++ID LCK   + +A+ L LK +R  N  P+  +Y  
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAY-LLLKRMREVNLTPDECSYNT 339

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+  E K+N A  +  +M  Q L P+  TYT+LI G+C+ G  + A  ++  M   G
Sbjct: 340 LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITG 399

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P                 V +A ++LK      +  D ITY+ L++E +  AE +Q  
Sbjct: 400 VRPR---------------EVSKAKQILKCMLADGIDPDVITYSALINEGM-IAEAEQFK 443

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
               RM    ++ D+ ++  +I ++C++  + E+   +   +  G  P   TY S++ G 
Sbjct: 444 QYMSRM---KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 500

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G++  A ++   + +  CA D  T   L+ G+CK   LDEA    E M+ + I P  
Sbjct: 501 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 560

Query: 578 VTRVTLAYEYCKQGDSATAMIILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
            T   L   +CK+G    A+I+L+  L+K L   T+    L+  L +E +V  A+  F +
Sbjct: 561 YTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 620

Query: 635 LLGKD 639
           ++ K+
Sbjct: 621 IICKE 625



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 182/417 (43%), Gaps = 38/417 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM-CAR 217
           ++  F + G++     ++  M   GL   T     ++      G V+ A  +F E+ C  
Sbjct: 566 LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 625

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+ AD  +Y  M+  Y + G++ E +R +  M +      +A+  +L+  +  KG    +
Sbjct: 626 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG---QL 682

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----DNY----- 328
            +   L  +MV++G KP+  T+ +LI GLC+ G  E A +   K+V      DN      
Sbjct: 683 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 742

Query: 329 -------------------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                                     P+  TY AM++G  ++  + ++  +L  M E GL
Sbjct: 743 IKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGL 802

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P    Y +LI   C+VG+ + A++L + M   G  P+  A ++I+ GLCK G+V+EA  
Sbjct: 803 QPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 862

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +     +  +     T+T L+    K+ +   A  L   M   GL  D+  Y  LI   C
Sbjct: 863 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 922

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +K + ++   ++E  + GL P   TY ++       G +    K  + +   G  P
Sbjct: 923 NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 206/474 (43%), Gaps = 49/474 (10%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRVT 240
           +GL  IT      V I  +  +   A  V   +   G  C+   S  L  ++ C    + 
Sbjct: 102 SGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLF 161

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDK-GFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             D  ++A +  G +LD A        F D+ GF+ S+     +L  +V  G   + Y  
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIF----FMDECGFKASLFSCNNILNALV--GINKSEYV- 214

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                      W      LFLK      +  +V T   +++  C + K+++AE +L++MK
Sbjct: 215 -----------W------LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK 257

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               LPN  TY +++  + K G  + A  ++D M K G   ++Y YN +ID LCK  R  
Sbjct: 258 -NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            AY LLK+  +  L  D+ +Y  L+     + +   A+ +F +M++  L P +  YT LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +CR  +  E+ +   E    G+ P +               +S A +  + M   G  
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPRE---------------VSKAKQILKCMLADGID 421

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD ITY ALI+    +  + EA QF + M    IS    +   +   YC++G+   A  +
Sbjct: 422 PDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 477

Query: 600 LESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +++ +  W   I T  +L+R LC    +  A  F   LL K   +D  +L  L
Sbjct: 478 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 531



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 168/348 (48%), Gaps = 4/348 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ + + G++ E   ++  M  N +   +++ N ++    + G +     ++ +M   G
Sbjct: 637 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 696

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y+L++   C  G +  A ++L  M+  G   DN    +LI AF +K     + 
Sbjct: 697 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS---KMS 753

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L   M      P+  T+  +++GL +K W ++++ +   +V S   +P    Y A+
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVES-GLQPKHTHYIAL 812

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C+   ++ A  L E MK  G++P+    +S++ G CK G  E A  +   + + G 
Sbjct: 813 INAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 872

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P I  +  ++ GLCK+ ++ +A+ L +      L+ D +TY +L++    +     AL 
Sbjct: 873 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 932

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           L+  M   GL P+I  Y TL  A      M++ EK  ++    G+ P+
Sbjct: 933 LYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 205/413 (49%), Gaps = 7/413 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  RG+  +  +  +++  +C++G +  A    + +L  G + D  T T L    C   
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC--- 166

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I+QAF   +++V  G+  +  ++  LI GLCK G T  A  L L+ V  +  +PNV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL-LQRVDGNLVQPNV 225

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK + +N A  L   M  +G+ P+  TY++LI G C +G  + A DL + 
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  E   P++Y +N +++  CK G+++E   +     ++ ++ + +TY  L+  +    E
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +F  M + G+NPDI +Y+ +I  FC+ KK  E+   F+E     + P   TY+S
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G IS A++   +M+  G  P+  TY +++  LCK  ++D+A         KG
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
             P   T   L    C+ G    A  + E L  K   L +     +I+  C E
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 192/375 (51%), Gaps = 4/375 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G    A ++   +    V  +   Y  ++ + C++  V EA    S M+ +G   D 
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDV 260

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI+ FC     G +K A +L  +M+ +  KP+VYT  +L++  CK G  ++   +
Sbjct: 261 VTYSALISGFC---ILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  ++     KPN  TY +++ GYC  +++N+A+ +   M + G+ P+  +Y+ +I G C
Sbjct: 318 F-DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+  F+ A +L   M ++   P++  Y+++IDGL K GR+  A +L+ +   R +  +  
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +L    K  +  +A+ L  +    G  PDI  Y+ LI   C+  K++++ K F++ 
Sbjct: 437 TYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL 496

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G       YT MI G+  +G  + A+    +M   GC PD  TY  +I  L K+ + 
Sbjct: 497 LVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 559 DEACQFYESMIGKGI 573
           D A +    MI +G+
Sbjct: 557 DMAEKLLREMIARGL 571



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 188/380 (49%), Gaps = 4/380 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  +G KPN+    +LI+  C+ G    AF +F K+++   Y P+  T+T +  G 
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM-GYVPDTITFTTLSKGL 165

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C + ++ +A +  +++   G   +  +Y +LI+G CKVG    A DL+  +      PN+
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN IID +CK   V EA++L  +   + +  D +TY+ L+S      + K A+ LF +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+   + PD++ +  L+ AFC+  KMKE +  F   +  G+ P   TY S++ GY     
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ A   F  M Q G  PD  +Y  +I+G CK  K DEA   ++ M  K I P  VT  +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 583 LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L     K G  + A+ +++ +  +     I T N+++  LC   +V  A     K   K 
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 640 QNVDRVSLAALKNACYESNK 659
              D  + + L     +S K
Sbjct: 466 FQPDISTYSILIKGLCQSGK 485



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 210/450 (46%), Gaps = 7/450 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+LGL+ +A  VF ++   G   D  ++  +    C  G++ +A  +   ++ 
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   D  +   LI   C     G  + A +LL+ +     +PNV  +  +ID +CK   
Sbjct: 184 LGFHFDQISYGTLIHGLCK---VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             +AF LF ++V S    P+V TY+A+ISG+C   K+  A  L  +M  + + P+  T+ 
Sbjct: 241 VNEAFDLFSEMV-SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            L+   CK G  +    + D+M K+G  PN   YN+++DG C    V +A  +     Q 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D  +Y+I+++   K  +  +A+ LF  M +  + PD+  Y++LI    +  ++  +
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   +    G+ P   TY S++    +   +  A+    +    G  PD  TY  LI G
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-- 609
           LC+  KL++A + +E ++ KG +        +   +C +G    A+ +L  ++    I  
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 610 -RTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +T   +I  L  +    MA     +++ +
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 6/356 (1%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A  LF +L+R  N  P    +  ++    K +  +    L ++M+ +G+ PN     
Sbjct: 66  VDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C++G    A+ +   + K G  P+   +  +  GLC KG++Q+A+    K    
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D+I+Y  L+    K  ET+ AL L  R+    + P++  Y T+I + C+ K + E+
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F E ++ G+ P   TY+++I G+   G +  A+  F +M      PD  T+  L++ 
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
            CK  K+ E    ++ M+ +GI P  VT  +L   YC   +   A  I  ++ +      
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK--YAL 662
           I++ + +I   C  K+   A   F ++  K+   D V+ ++L +   +S +  YAL
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 39/280 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F + G++KEG ++   M   G+     T N ++   C +  V  A+ +F+ M   G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 219 VCADASSYKLMVVAYCRM-----------------------------------GRVTEAD 243
           V  D  SY +M+  +C++                                   GR++ A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           + +  M DRG   +  T   ++ A C       + +A  LL +   KG++P++ T+++LI
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCK---THQVDKAIALLTKFKDKGFQPDISTYSILI 477

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC+ G  E A ++F  L+    Y  +V+ YT MI G+C E   N A  LL +M++ G 
Sbjct: 478 KGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           +P+  TY  +I    K    + A  L+  M   G   N Y
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 12/468 (2%)

Query: 150 ERA----HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           ERA    H     M+    + G L+ GF +  +M  +GL     T N ++   C  G + 
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 287

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + DEM ++ +  D  +Y ++     R G            L  G  + + T ++L+
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 347

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G    +  A E+L+ +V  G  P    +  LI+G C+ G  E AF  F ++ +S
Sbjct: 348 NGLCKDG---KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KS 403

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            + KP+  TY A+I+G CK E++  A+ LL  M++ G+ P   T+ +LI  + + G  E+
Sbjct: 404 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            + ++  M + G  PN+ +Y +I++  CK G++ EA  +L   F +++  +   Y  ++ 
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +++     QA  L  +M   G++P I  Y  LI   C Q ++ E+E+         L P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              +Y ++I      GNI  A+   QRM++ G      TY  LISGL    +L+E    Y
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           + M+   + P       +   Y K G+   A    E L K++  +  N
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA----EDLRKEMLQKRNN 687



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 8/474 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G L E   M+  M  +G P   + + N V+      G    A EVFDEM  R V  +  +
Sbjct: 178 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 237

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+  + + G +    R    M+  G   +  T  +L++  C  G  G   +   LL+
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG---ETSALLD 294

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +   P+ +T+++L DGL + G ++    LF K ++ +      +T + +++G CK+
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK-NGVTIGDYTCSILLNGLCKD 353

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K++ AE +L+ +   GL+P    Y +LI G+C+ G  E A+     M      P+   Y
Sbjct: 354 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITY 413

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           NA+I+GLCK  R+  A +LL +     +     T+  L+  + +  + ++   +   M +
Sbjct: 414 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 473

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL P++ +Y +++ AFC+  K+ E+     +     + P  + Y ++I  Y+  G    
Sbjct: 474 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 533

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A    ++M   G +P  +TY  LI GLC QS++ EA +   S+    + P  V+  TL  
Sbjct: 534 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 593

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             C +G+   A+ + + + K   K  +RT + LI  L    R+      + K++
Sbjct: 594 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 206/463 (44%), Gaps = 6/463 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F  + + G   D  ++   V A    G + EA   L  M   GA   NA    ++ A   
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           +  RG    A E+ +EM  +   PN  T+  +IDG  K G  E  FRL  ++V     KP
Sbjct: 212 RAGRGG--DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV-CHGLKP 268

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  TY  ++SG C+  +M     LL+ M  Q ++P+  TY+ L  G  + G+ +    L 
Sbjct: 269 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 328

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
               K G T   Y  + +++GLCK G+V  A E+L+      L   ++ Y  L++ + + 
Sbjct: 329 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E + A   F +M    + PD   Y  LI   C+ +++  ++    E    G+ PT ET+
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I  Y R G +         M + G  P+ ++YG++++  CK  K+ EA    + M  
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGM 627
           K + P       +   Y + G +  A I++E +        I T N LI+ LC++ ++  
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 568

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           A    + L       D VS   L +AC          DL QR+
Sbjct: 569 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 6/371 (1%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    +++AF +L      G +P+ +     +      G   +A  +  ++ R     PN
Sbjct: 143 GRHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPN 199

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             +Y  +I+G  +  +   A  + + M E+ +LPN  TY ++I GH K G+ E  + L D
Sbjct: 200 AFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 259

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  PN   YN ++ GLC+ GR+ E   LL +   +++  D  TY+IL     +  
Sbjct: 260 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 319

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           ++K  L LF + +K G+    +  + L+   C+  K+  +E+  Q  + AGL PT+  Y 
Sbjct: 320 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 379

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I GY + G +  A   F +M      PD+ITY ALI+GLCK  ++  A      M   
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
           G++P   T  TL   Y + G      I+L  + +   K  + +  +++   C   ++  A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499

Query: 629 ALFFHKLLGKD 639
                 +  KD
Sbjct: 500 VAILDDMFHKD 510



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 19/346 (5%)

Query: 141 TSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLP 185
             L  +G    A EV+Q +V++               + + G L+  FS   +M +  + 
Sbjct: 348 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 407

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T N ++   C+   +  A+++  EM   GV     ++  ++ AY R G++ +    
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           LS M + G   +  +   ++ AFC  G    I +A  +L++M  K   PN   +  +ID 
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNG---KIPEAVAILDDMFHKDVLPNAQVYNAIIDA 524

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             + G  ++AF L  K+ +S+   P++ TY  +I G C + +++ AE ++  +    L+P
Sbjct: 525 YVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  +Y +LI   C  GN ++A DL   M K G    +  Y+ +I GL   GR+ E   L 
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           +K  Q  +      + I++  + K     +A  L   M++   N D
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 32/459 (6%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y V    L   G F+RA E+++ M              SM+      GL +   T N ++
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQM--------------SML------GLKVSAHTYNPLI 284

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C+  + E A ++  EM  RG      +Y  ++ + CR+GRV++A R+L  M++   +
Sbjct: 285 RGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLM 344

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D  +   LI  +      G+  +A  L  E+  K   P+V T+  LIDG C+ G  + A
Sbjct: 345 PDLVSYNTLIYGYSR---LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIA 401

Query: 316 FRLFLKLVRSDNYK----PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                K ++ D  K    P+V T+T ++ G+C+   +  A+ L + M  +GL P+   YT
Sbjct: 402 -----KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYT 456

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           + I G  K+GN  +A+ + + M  EG  P++  YN +I+GLCK G   +A EL++K    
Sbjct: 457 TRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLE 516

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D +TYT ++  HL     ++A  +F  M+K G++P +  YT LI ++  + ++  +
Sbjct: 517 GIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFA 576

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +K+F E    G+ P   TY ++I G  ++  +  A   F  M   G +P+  TY  LI+ 
Sbjct: 577 KKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINE 636

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
                   +A + Y+ M+ + I P   T   L     K 
Sbjct: 637 NSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKD 675



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 271/633 (42%), Gaps = 26/633 (4%)

Query: 50  STSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTH-EQAITVVASLA 108
           + S  PS      KT+      + + + H R  P   N QID     H   A+T    L 
Sbjct: 2   TLSFRPSSTTFFSKTI------TLFLKPHFRFYPFSTNPQIDNSVNPHFHSAVTQPEFLL 55

Query: 109 NEAGS-----MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSF 163
               S     + AL FF W      F      ++     L  NG  + A+ VM+  +   
Sbjct: 56  RVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVK 115

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
            + G L     +V         +    L+ ++ +  +  ++E    VF +M   G+  D 
Sbjct: 116 VDGGVLD---VLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDV 172

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +   ++        V E +   S M+         T   ++ + C +G    + +A E+
Sbjct: 173 RNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG---EVGRAVEV 229

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           L+ M   G  PN  ++ VL++GL  KG  ++A  L ++ +     K + HTY  +I G+C
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL-IEQMSMLGLKVSAHTYNPLIRGFC 288

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K+E    A  L   M  +G LP   TY +++Y  C++G    A   +D+M  E   P++ 
Sbjct: 289 KKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV 348

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           +YN +I G  + G   EA  L  +   + L    +TY  L+    +      A G+   M
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDM 408

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +K GL PD+  +T L+  FC+   +  +++ F E ++ GL P    YT+ I G L+ GN 
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A    + M   G  PD ITY  LI+GLCK    D+A +  + M  +GI P  VT  ++
Sbjct: 469 SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSI 528

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
            + +   G    A  +   + KK     + T   LI       R+  A  +F ++  K  
Sbjct: 529 IHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588

Query: 641 NVDRVSLAALKNACYESN----KYALFSDLSQR 669
           + + ++  AL     + N     Y LF+++  +
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESK 621


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 221/459 (48%), Gaps = 26/459 (5%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIAC---ELG---LVEYAEEVFDEMCARGVCADASS 225
            + +   M   G P      N  +G  C   EL    L++ AE+V++EM       +  +
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKIN 419

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
                   C +G+  +A + +  M+ +G + D +T T +IT  C       + +AF L +
Sbjct: 420 TANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK---RVDKAFLLFQ 476

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM + G  P+VYT+T+LID  CK G  E+A   F ++ RS    PNV TYTA++  Y K 
Sbjct: 477 EMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEM-RSAGCSPNVVTYTALLHAYLKS 535

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MDLMGK--------- 395
           +++ +A  +  RM      PN  TY++LI G CK G  ++A ++   L+G          
Sbjct: 536 KQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFY 595

Query: 396 -EG-----CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            EG      +PN+  Y A+++GLCK  +V +A++LL        + ++I Y  L+    K
Sbjct: 596 FEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCK 655

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E   A  +F RM K G  P +H YT+LI    +  ++  + K   + +     P   T
Sbjct: 656 VGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVT 715

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT+M+ G  + G    A+     M + GC+P+ +TY ALI GL K  K+D   + +  M 
Sbjct: 716 YTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMK 775

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
            KG +P  VT   L    C  G    A ++L+ + +  W
Sbjct: 776 TKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW 814



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 238/559 (42%), Gaps = 84/559 (15%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            VVA L       + + FF WA     ++H    Y   A  L                  
Sbjct: 103 VVVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYDALAEVL------------------ 144

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            F +  R  E   ++ E+  +   ++   LN +V   C  GL   A E    +   G   
Sbjct: 145 GFEDPARTAE--RLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRP 202

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
            A +Y  +V      G+V  A R    M   G  +D +T+     A C +G  G    A 
Sbjct: 203 SAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG---DAL 259

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +LLE   R+ +K +    T +I GL +     +A   FL  +R ++Y PNV TY  +++G
Sbjct: 260 DLLE---REDFKLDTVLCTQMISGLMEASLFNEAMS-FLHRMRCNSYIPNVVTYRTLLTG 315

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           + K++++   + ++  M  +G  P+ + + SL++ +C   ++  AY L + M   GC P 
Sbjct: 316 FLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375

Query: 402 IYAYNAIIDGLCKK-----------------------------------------GRVQE 420
              YN  I  +C +                                         G+ ++
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A++++K+  ++    D  TYT +++   +     +A  LF  M K G+NPD++ YT LI 
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           +FC+   +++++ +F E  +AG  P   TYT+++  YL+   +  A   F RM    C P
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKG----------------ISPCEVTRVTLA 584
           + ITY ALI GLCK  ++ +AC+ Y  +IG                  ISP  VT   L 
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALV 615

Query: 585 YEYCKQGDSATAMIILESL 603
              CK    + A  +L+++
Sbjct: 616 NGLCKAQKVSDAHDLLDAM 634



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 225/534 (42%), Gaps = 100/534 (18%)

Query: 140 ATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGL 184
           A  L   G FE+A ++++ M               ++   +  R+ + F +  EM   G+
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++   C+ GL+E A+  FDEM + G   +  +Y  ++ AY +  ++ +A+ 
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKG------------------------FRGS---- 276
               M+      +  T + LI   C  G                        F G     
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 277 --------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                               +  A +LL+ M+  G +PN   +  L+DG CK G  + A 
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            +FL++ +   Y P+VHTYT++I    K+ +++ A  +L +M +    PN  TYT+++ G
Sbjct: 664 EVFLRMTKC-GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDG 722

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK G  E+A +L+ LM K+GC+PN+  Y A+IDGL K G+V    EL  +   +    +
Sbjct: 723 LCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPN 782

Query: 437 KITYTILLSE---------------HLKQAETKQ------------------ALGLFCRM 463
            +TY IL++                 +KQ    +                  +LGL   M
Sbjct: 783 YVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEM 842

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMK---ESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
                 P    Y  LI +F +  +++   E  K   E  ++    +K+ +TS+I      
Sbjct: 843 ESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLS 902

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +  AV  +  M + G  PD   +  L+ GL +++K +EA Q    +  +G++
Sbjct: 903 SQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956



 Score = 39.3 bits (90), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 46/115 (40%)

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G    A++   R+   G  P  +TY AL+  L    +++ A +  + M   G      T 
Sbjct: 183 GLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV 242

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            + A   CK+G    A+ +LE  D KL       +I  L        A  F H++
Sbjct: 243 GSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM 297


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 193/385 (50%), Gaps = 8/385 (2%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D+ T + LI  FC        +QA+ LL+EM ++G  P+   +  +I GLC  G  + A 
Sbjct: 32  DSITYSTLINGFCKAR---DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
             +  + R  +  P+V TYT ++   CK  +++ A ++LE M E G  PN  TY +LI G
Sbjct: 89  VHYRDMQR--HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CK+GN + A  L + M +  C+P+++ YN +IDG CK+ R Q+  +LL++  +   + +
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            ITY  L+   +K  +   A  L   M++    P    +  +I  FC+  ++  + + FQ
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
                G  P   TY  MI G  R   I  A +  +RM + GC PD +TY +++SGLCK S
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---N 613
           ++DEA + YE +   G     VT  TL    CK      A  +L  +++      V    
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGK 638
            LI   C   ++  +  FF ++L K
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDK 411



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 215/447 (48%), Gaps = 5/447 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++S+F    + +E + +            + T + ++   C+    + A  + DEM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+    + Y  ++   C  GRV  A      M  R       T T+L+ A C       
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSA---R 117

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I  A  +LE+M+  G  PNV T+  LI+G CK G  ++A  LF +++ + +  P+V TY 
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYN 176

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I GYCK+E+      LL+ M + G  PN  TY +L+    K G +  A++L  +M + 
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C P+ + +N +ID  CK G++  AYEL +    R    D  TY I++S   +      A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L  RM +AG  PD+  Y ++++  C+  ++ E+ + ++     G F    T +++I G
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             +   +  A K  + M + G APD + Y  LI G CK  +LD++  F+  M+ KG  P 
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 416

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
            +T   +  + CK        ++L+++
Sbjct: 417 VITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 207/415 (49%), Gaps = 5/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +    ++ + ++ EM   G+    +  N ++   C+ G V+ A   + +M  R 
Sbjct: 39  LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRH 97

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y ++V A C+  R+++A   L  M++ G   +  T   LI  FC     G++ 
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK---LGNMD 154

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L  +M+     P+V+T+ +LIDG CK+   +   +L  ++V+    +PN  TY  +
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY-GCEPNFITYNTL 213

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    K  K   A  L + M  +   P+  T+  +I   CKVG  + AY+L  LM   GC
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+IY YN +I G C+  R+ +A +LL++  +     D +TY  ++S   K ++  +A  
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  +   G   D+   +TLI   C+ +++ ++EK  +E    G  P    YT +I G+ 
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +   +  ++ +F  M   GC P  ITY  +I  LCK +++ + C   ++M+ +G+
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 204/440 (46%), Gaps = 15/440 (3%)

Query: 207 AEEVFD----EMCARGVCA-DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           A+E +D     +C  G+C+ D+ +Y  ++  +C+     +A R L  M  RG +  NA  
Sbjct: 14  AQEAYDLFKNHLC--GLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVY 71

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             +I   CD G    +  A     +M R    P+V T+T+L+D LCK      A  +   
Sbjct: 72  NTIIKGLCDNG---RVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILED 127

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++ +    PNV TY  +I+G+CK   M+ A +L  +M E    P+  TY  LI G+CK  
Sbjct: 128 MIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 186

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +    L+  M K GC PN   YN ++D L K G+  +A+ L +   +R+ +    T+ 
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 246

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           +++    K  +   A  LF  M   G  PDI+ Y  +I+  CR  ++ ++ +  +    A
Sbjct: 247 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 306

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P   TY S++ G  +   +  A + ++ +   G   D +T   LI GLCK  +LD+A
Sbjct: 307 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRK 618
            +    M   G +P  V    L + +CK      ++     +  K  + TV T   +I K
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 426

Query: 619 LCSEKRVGMAALFFHKLLGK 638
           LC   RV    +    +L +
Sbjct: 427 LCKSARVRDGCMLLKTMLER 446



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 37/265 (13%)

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++    +K + QEAY+L K         D ITY+ L++   K  + +QA  L   M K
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 466 AGL----------------------------------NPDIHAYTTLIAAFCRQKKMKES 491
            G+                                   P +  YT L+ A C+  ++ ++
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               ++ I AG  P   TY ++I G+ + GN+  AV  F +M +  C+PD  TY  LI G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLW 608
            CKQ +  +  +  + M+  G  P  +T  TL     K G    A  + + +   D K  
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFH 633
             T N +I   C   ++ +A   F 
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQ 266



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 6/213 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEV 210
           +H     M+  F ++G+L   + +   MT+ G LP I  T N ++  AC    ++ A ++
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY-TYNIMISGACRANRIDDARQL 299

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            + M   G   D  +Y  +V   C+  +V EA      + + G  LD  T + LI   C 
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC- 358

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           K  R  +  A +LL EM R G  P+V  +T+LI G CK    +K+   F +++      P
Sbjct: 359 KSRR--LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML-DKGCVP 415

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            V TY+ +I   CK  ++    MLL+ M E+G+
Sbjct: 416 TVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 205/423 (48%), Gaps = 21/423 (4%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L+E AE+ + EM A GV  +  +        C  G+  +A   +  M+ +G I D +T +
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++   C+      ++ AF L EEM R G   +VYT+T+++D  CK G  E+A + F ++
Sbjct: 488 KVLGYLCNAS---KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            R     PNV TYTA+I  Y K +K++ A  L E M  +G LPN  TY++LI GHCK G 
Sbjct: 545 -REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 383 FERAYDLMDLM-GKEGCT----------------PNIYAYNAIIDGLCKKGRVQEAYELL 425
            E+A  + + M G +                   PN+  Y A++DG CK  RV+EA +LL
Sbjct: 604 MEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLL 663

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
                   + ++I Y  L+    K  +  +A  +   M + G    ++ Y++LI  + + 
Sbjct: 664 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKV 723

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           K+   + K   + +     P    YT MI G  + G    A K  Q M + GC P+ +TY
Sbjct: 724 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 783

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            A+I G  +  K++   +  E M  KG++P  VT   L    CK G    A  +LE + +
Sbjct: 784 TAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843

Query: 606 KLW 608
             W
Sbjct: 844 THW 846



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 236/512 (46%), Gaps = 46/512 (8%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VSSF       G+ ++ FS++ EM   G    TST ++V+G  C    +E A  +F+EM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMK 510

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+ AD  +Y +MV ++C+ G + +A +W + M + G   +  T T LI A+       
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK--- 567

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY- 328
            +  A EL E M+ +G  PN+ T++ LIDG CK G  EKA ++F ++  S      D Y 
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYF 627

Query: 329 ---------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
                    +PNV  Y A++ G+CK  ++  A  LL+ M  +G  PN   Y +LI G CK
Sbjct: 628 KQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 687

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           VG  + A ++   M + G    +Y Y+++ID   K  R   A ++L K  +     + + 
Sbjct: 688 VGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 747

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           YT ++    K  +T +A  L   M + G  P++  YT +I  F R  K++   +  +   
Sbjct: 748 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMG 807

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ---- 555
           + G+ P   TY  +I    ++G +  A    + M Q         Y  +I G  K+    
Sbjct: 808 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIES 867

Query: 556 -SKLDEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
              LDE  Q         Y  ++   I   +  R+ +A    ++  + +A ++  S    
Sbjct: 868 LGLLDEIGQDDTAPFLSLYRLLVDNLI---KAQRLEMALRLLEEVATFSATLVDYS---- 920

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
               T N+LI  LC   +V  A   F ++  K
Sbjct: 921 ---STYNSLIESLCLANKVDKAFRLFSEMSKK 949



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 214/501 (42%), Gaps = 68/501 (13%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
            +SFF WA     ++H   +Y      ++ + + +   E++Q                  
Sbjct: 148 VISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQ------------------ 189

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
             ++ ++   +    LN +V   C  G    A E    +         S+Y  ++ A+ +
Sbjct: 190 --QIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLK 247

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
              +  A      M      +D  TL     + C     G  ++A  L+E    + + P+
Sbjct: 248 ADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKV---GKWREALTLME---TENFVPD 301

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
              +T LI GLC+    E+A   FL  +R+ +  PNV TY+ ++ G   ++++ R + +L
Sbjct: 302 TVFYTKLISGLCEASLFEEAMD-FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG---- 411
             M  +G  P+   + SL++ +C  G+   AY L+  M K G TP    YN +I      
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGD 420

Query: 412 -------------------------------------LCKKGRVQEAYELLKKAFQRELQ 434
                                                LC  G+ ++A+ ++++   +   
Sbjct: 421 KDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D  TY+ +L      ++ + A  LF  M + GL  D++ YT ++ +FC+   ++++ K+
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G  P   TYT++I  YL+   +S A + F+ M   GC P+ +TY ALI G CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 555 QSKLDEACQFYESMIGKGISP 575
             ++++ACQ +E M G    P
Sbjct: 601 AGQMEKACQIFERMCGSKDVP 621



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 185/459 (40%), Gaps = 68/459 (14%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V  YCR G  + A   L  + D       +T   LI AF        +  A  +  EM
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD---CLDSASLVHREM 261

Query: 288 VRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
                + + +T       LCK G W E      L L+ ++N+ P+   YT +ISG C+  
Sbjct: 262 SLANLRMDGFTLRCYAYSLCKVGKWREA-----LTLMETENFVPDTVFYTKLISGLCEAS 316

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A   L RM+    LPN  TY++L+ G        R   ++++M  EGC P+   +N
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL----------LSEHLKQAETK-- 454
           +++   C  G    AY+LLKK  +       + Y IL          LS HL +   K  
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAY 436

Query: 455 -----------------------------QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
                                        +A  +   M+  G  PD   Y+ ++   C  
Sbjct: 437 SEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNA 496

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            KM+ +   F+E    GL     TYT M+  + + G I  A K+F  M ++GC P+ +TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            ALI    K  K+  A + +E+M+ +G  P  VT   L   +CK G    A  I E    
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFE---- 612

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
                       ++C  K V    ++F +    D N +R
Sbjct: 613 ------------RMCGSKDVPDVDMYFKQY--DDDNSER 637



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 39/306 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++    ++G+L E   +  EM+ +G P    T + ++    ++   + A +V  +M
Sbjct: 677 VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 736

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+   C++G+  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 737 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GRI 793

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I+   ELLE M  KG  PN  T+ VLID  CK G  + A  L L+ ++  ++  +   
Sbjct: 794 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL-LEEMKQTHWPTHAAG 852

Query: 335 YTAMISGYCKE------------------------------EKMNRAEMLLERMKEQG-- 362
           Y  +I G+ KE                               K  R EM L  ++E    
Sbjct: 853 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATF 912

Query: 363 ---LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              L+  ++TY SLI   C     ++A+ L   M K+G  P +  + ++I GL +  ++ 
Sbjct: 913 SATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKIS 972

Query: 420 EAYELL 425
           EA  LL
Sbjct: 973 EALLLL 978



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 23/359 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K     +  L+D L  +   EK     L+ +R D+ +        ++  YC+    + 
Sbjct: 160 GYKHTSPVYNALVD-LIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSI 218

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDL--MGKEGCTPNIYAY 405
           A   L R+K+    P+ +TY  LI    K    + A   +  M L  +  +G T   YAY
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAY 278

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +     LCK G+ +EA  L++         D + YT L+S   + +  ++A+    RM  
Sbjct: 279 S-----LCKVGKWREALTLME---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
               P++  Y+TL+     +K++   ++     +  G +P+ + + S++  Y   G+ S 
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVT 579
           A K  ++M + G  P  + Y  LI  +C          L+ A + Y  M+  G+   ++ 
Sbjct: 391 AYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKIN 450

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             +     C  G    A  ++  +  + +I   +T   ++  LC+  ++ +A L F ++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM 509



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 6/241 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    ++G+  E + ++  M   G      T   ++     +G +E   E+ + M ++G
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKG 810

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y++++   C+ G +  A   L  M         A    +I     +GF     
Sbjct: 811 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVI-----EGFNKEFI 865

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SDNYKPNVHTYTA 337
           ++  LL+E+ +    P +  + +L+D L K    E A RL  ++   S        TY +
Sbjct: 866 ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 925

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C   K+++A  L   M ++G++P   T+ SLI G  +      A  L+D +    
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMV 985

Query: 398 C 398
           C
Sbjct: 986 C 986


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 9/421 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+  ++ RL E   ++ EMT  G     ++ N VV   C    +     V DEM  RG
Sbjct: 203 IISALCKLDRLDEARGILAEMTPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRG 257

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  +V A+C+   +  A   L+ M+  G + +  T T+L+  F D G    + 
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDG---KVH 314

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +   MV +GW P+  ++ VLI GLC  G  ++A  +F  + +SD   P+V TY+ +
Sbjct: 315 DALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL-PDVRTYSTL 373

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K   ++ A  +   M   G  PN   YT+++   CK   F++A +L+D M  E C
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENC 433

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +N +I  LC  GR   A  +     +     +  TY  LL    ++   + AL 
Sbjct: 434 PPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALR 493

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+  G    + +Y T I+  C+ + +KE+       I  G+ P   T+ ++I  Y 
Sbjct: 494 MLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC 553

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++GN+ +A     RM+ + C  + + Y +L+SGLC Q KLD+A  +   M+ +GI P E 
Sbjct: 554 KEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEA 613

Query: 579 T 579
           T
Sbjct: 614 T 614



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 12/450 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+   V  A  + DEM  +G   D  S+  ++ A C++ R+ EA   L+ M
Sbjct: 164 TYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM 223

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              GA     +   ++ A C + FR  +++ F +++EMV +G +P+   +T ++   CK 
Sbjct: 224 TPVGA-----SYNAVVHALCGQ-FR--MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKA 275

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A  +  ++V ++   PNV T+T ++ G+  + K++ A  +   M  +G  P+T +
Sbjct: 276 RELRMACAILARMV-TEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTIS 334

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y  LI G C +G+ +RA  +   MGK  C P++  Y+ +IDG  K G +  A  +     
Sbjct: 335 YNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT 394

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
               + + + YT ++    K+    QA  L  +M      P+   + TLI + C   +  
Sbjct: 395 NAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAG 454

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   F      G  P   TY  ++ G  R+GN   A++    M   G     ++Y   I
Sbjct: 455 RALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTI 514

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           SGLC+   + EA      MI +GI P   T   + + YCK+G+   A  +L  +D     
Sbjct: 515 SGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCP 574

Query: 610 RTV---NTLIRKLCSEKRVGMAALFFHKLL 636
           R +    +L+  LCS+ ++  A ++  K+L
Sbjct: 575 RNIVAYTSLMSGLCSQHKLDDAMVYLLKML 604



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 158/387 (40%), Gaps = 36/387 (9%)

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD--NYKPNVHTYTAMISG 341
           L+EM  +G           I    + G  ++A + F +  R D     P V  Y  ++  
Sbjct: 78  LQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYR-ARHDLGCAAPTVRVYNHLLDA 136

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC--- 398
             +E  +     + + M++ G+ PN  TY  LI   C+      A  ++D M ++GC   
Sbjct: 137 LLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPD 196

Query: 399 ---------------------------TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
                                      TP   +YNA++  LC + R++E + ++ +   R
Sbjct: 197 EVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHR 256

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L+ D + YT ++    K  E + A  +  RMV  G  P++  +T L+  F    K+ ++
Sbjct: 257 GLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDA 316

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              +   +  G  P+  +Y  +I G    G++  A+  F  M +  C PD  TY  LI G
Sbjct: 317 LGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDG 376

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDK-KLW 608
             K   LD A   +  M   G  P  V    +    CK+   D A  +I   SL+     
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPN 436

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             T NTLIR LC   R G A   FH +
Sbjct: 437 TLTFNTLIRSLCDLGRAGRALNVFHGM 463



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 21/293 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y V    L   G+ +RA  V  CM               +  F++ G L    S+  +MT
Sbjct: 335 YNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT 394

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           N G          +V + C+  + + AE + D+M       +  ++  ++ + C +GR  
Sbjct: 395 NAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAG 454

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTH 299
            A      M   G   ++ T   L+       FR G+ + A  +L EM+  G++ ++ ++
Sbjct: 455 RALNVFHGMRRYGCPPNDRTYNELLHGL----FREGNCEDALRMLTEMLNHGFELSLVSY 510

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
              I GLC+    ++A  L  +++     +P+  T+ A+I  YCKE  +  A  +L RM 
Sbjct: 511 NTTISGLCQMRMIKEAMILLGRMI-IQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMD 569

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
                 N   YTSL+ G C     + A   +  M  EG  PN   +N ++ G+
Sbjct: 570 AVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 225/482 (46%), Gaps = 25/482 (5%)

Query: 137 IVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI------------------- 177
           I+   SL+S     R  E  +CM++     G + +GF+  I                   
Sbjct: 171 IITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLY 230

Query: 178 -EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            E    G+ +   T + ++   C+ G VE AEEV   +   G+      Y  +V  YC++
Sbjct: 231 REAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQI 290

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G +  A   +  M  RG   +      +I  FC+      I +A E +++MV KG  P+V
Sbjct: 291 GDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQM---IDKAEEWVKKMVGKGIAPSV 347

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T+ +LIDG  +     + F++ L+ +  +  KPNV +Y ++I+  CK+ K+  AEM+L 
Sbjct: 348 ETYNILIDGYGRLCVFSRCFQI-LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M  +G+LPN N Y  LI G C VG    A    D M K G    I  YN++I GLCK G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +++EA E+           D ITY  L+S +     +++ L L+  M K GL P I+ + 
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI+  C ++ +K  E  F E +   L P +  Y +MI  Y   G++  A    + M  +
Sbjct: 527 PLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PDN TY +LI G  K+ KL E     + M  KG+ P   T   L   +C   D   A
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGA 645

Query: 597 MI 598
            +
Sbjct: 646 YV 647



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 252/542 (46%), Gaps = 45/542 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V S  E  +      +  EM   G         R +  A +LG ++ A E+F+ M  R 
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y +++   C+  R+ +A++    M  R  + +  T   LI  +C  G    + 
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAG---EVD 153

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA- 337
            A  L E M ++  +P++ T   L+ GLCK    E+A R  L  ++ + + P+  TY+  
Sbjct: 154 VAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA-RCMLNEIKCNGFVPDGFTYSII 212

Query: 338 -----------------------------------MISGYCKEEKMNRAEMLLERMKEQG 362
                                              +++G CKE K+ +AE +L+ + E G
Sbjct: 213 FDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHG 272

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+P    Y +++ G+C++G+ +RA   ++ M   G  PN  A+N++ID  C+   + +A 
Sbjct: 273 LVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E +KK   + +     TY IL+  + +     +   +   M + G  P++ +Y +LI   
Sbjct: 333 EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCL 392

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+  K+ E+E   ++ +  G+ P    Y  +I G    G +  A+++F  M++ G     
Sbjct: 393 CKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI 452

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY +LI GLCK  KL EA + +  +   G  P  +T  +L   Y   G+S   + + E+
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512

Query: 603 LDKKLWIR-TVNTL--IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           + KKL ++ T+NT   +   CS++ + +    F+++L  + + DRV   A+ + CY+   
Sbjct: 513 M-KKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIH-CYQETG 570

Query: 660 YA 661
           + 
Sbjct: 571 HV 572



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 225/498 (45%), Gaps = 25/498 (5%)

Query: 93  DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFA-KFRHFMRLYIVCATSLISNGNFER 151
           D  T+  +I     L ++ G+  AL  +  AIG   K  ++    ++    L   G  E+
Sbjct: 205 DGFTY--SIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILL--NGLCKEGKVEK 260

Query: 152 AHEVMQCMV---------------SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           A EV++ +V               + + +IG +      + +M + GL       N V+ 
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             CE+ +++ AEE   +M  +G+     +Y +++  Y R+   +   + L  M + G   
Sbjct: 321 KFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKP 380

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +  +   LI   C  G    I +A  +L +MV +G  PN   + +LIDG C  G   +A 
Sbjct: 381 NVISYGSLINCLCKDG---KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           R F ++ + +     + TY ++I G CK  K+  AE +   +   G  P+  TY SLI G
Sbjct: 438 RFFDEMSK-NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +   GN ++  +L + M K G  P I  ++ +I G  K+G ++    L  +  Q  L  D
Sbjct: 497 YSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPD 555

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           ++ Y  ++  + +    ++A  L   MV  G+ PD   Y +LI    ++ K+ E++    
Sbjct: 556 RVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVD 615

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +    GL P  +TY+ +I G+    + + A  +++ M + G  P+      L +GL K  
Sbjct: 616 DMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDG 675

Query: 557 KLDEACQFYESMIGKGIS 574
           +L EA      MI  G+ 
Sbjct: 676 RLQEAQSICSEMIANGMD 693



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 240/541 (44%), Gaps = 59/541 (10%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM--- 159
           +V SL         L  F   +G   FR    +Y     + +  G+ + A E+ + M   
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLG-FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR 95

Query: 160 ------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                       +    +  R+++   +  EM+   L     T N ++   C+ G V+ A
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA------------------------- 242
             + + M    V     ++  ++   C+  R+ EA                         
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 243 ----DRWLSAMLD-------RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
               D    A LD       +G  +DN T ++L+   C +   G +++A E+L+ +V  G
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKE---GKVEKAEEVLKSLVEHG 272

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P    +  +++G C+ G  ++A  L ++ + S   +PN   + ++I  +C+ + +++A
Sbjct: 273 LVPGEVIYNTIVNGYCQIGDMDRAI-LTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA 331

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           E  +++M  +G+ P+  TY  LI G+ ++  F R + +++ M + G  PN+ +Y ++I+ 
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINC 391

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LCK G++ EA  +L+    R +  +   Y +L+       + ++AL  F  M K G+   
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           I  Y +LI   C+  K+KE+E+ F    + G  P   TY S+I GY   GN    ++ ++
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYE 511

Query: 532 RMNQIGCAPDNITYGALISGLCKQS-KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            M ++G  P   T+  LISG  K+  KL E    +  M+   +SP  V    + + Y + 
Sbjct: 512 TMKKLGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQET 569

Query: 591 G 591
           G
Sbjct: 570 G 570



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 161/322 (50%), Gaps = 6/322 (1%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +R +   P+      ++    + +K +    L + M   G  P+   Y   +    K+G
Sbjct: 21  FMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLG 80

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + + A +L + M +    PN++ YN +I GLCK+ R+++A +L  +   R L  +++T+ 
Sbjct: 81  DLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFN 140

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  + K  E   A+GL  RM K  + P I  + +L++  C+ ++++E+     E    
Sbjct: 141 TLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN 200

Query: 502 GLFPTKETYTSMICGYLR-DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           G  P   TY+ +  G L+ D    +A+  ++     G   DN T   L++GLCK+ K+++
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLI 616
           A +  +S++  G+ P EV   T+   YC+ GD   A++ +E ++ +  +R      N++I
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR-GLRPNCIAFNSVI 319

Query: 617 RKLCSEKRVGMAALFFHKLLGK 638
            K C  + +  A  +  K++GK
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGK 341



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 4/253 (1%)

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L D M +EG  P+      I++ L +  +     +L K+      + DK+ Y   +   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +K  + K A+ LF  M +  + P++  Y  LI   C++K+++++EK F E     L P +
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+ ++I GY + G +  A+   +RM +    P  IT+ +L+SGLCK  +++EA      
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL--ESLDKKLWIR--TVNTLIRKLCSEK 623
           +   G  P   T   +     K  D A A + L  E++ K + I   T + L+  LC E 
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 624 RVGMAALFFHKLL 636
           +V  A      L+
Sbjct: 257 KVEKAEEVLKSLV 269



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 3/184 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           Q   L+  M + G  P       ++ +    KK       F+E +  G  P K  Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              ++ G++  A++ F+ M +    P+   Y  LI GLCK+ ++ +A + +  M  + + 
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   YCK G+   A+ + E + K+     I T N+L+  LC  +R+  A   
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 632 FHKL 635
            +++
Sbjct: 194 LNEI 197



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 3/150 (2%)

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S   + +  M Q G  P       ++  L +  K D     ++ M+G G  P ++     
Sbjct: 13  SQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRA 72

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
                K GD   AM + E++ ++  +  V   N LI  LC EKR+  A   F ++  ++ 
Sbjct: 73  MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL 132

Query: 641 NVDRVSLAALKNACYESNKYALFSDLSQRI 670
             +RV+   L +   ++ +  +   L +R+
Sbjct: 133 VPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 218/454 (48%), Gaps = 41/454 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F E   L++   +  EM  +G      T   ++   C+ G ++ A  +  EM  +G
Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD   Y  ++  +C  G +         +L+RG      T   LI  FC     G +K
Sbjct: 243 LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---LGRLK 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ E M+ +G +PNVYT+T LIDGLC  G T++A +L L L+   + +PNV TY  +
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQL-LNLMLQKDEEPNVVTYNII 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I+  CK+  +  A  ++E MK++   P+  TY SL+ G C  G+ + A  L+ LM K+  
Sbjct: 359 INKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSS 418

Query: 398 -CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++ ++NA+I GLCK  R+ +A ++     ++    D +T  ILL+  LK  +  +A
Sbjct: 419 YTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKA 478

Query: 457 L-----------------------------------GLFCRMVKAGLNPDIHAYTTLIAA 481
           +                                   GL C+M  + L P +  Y  L+++
Sbjct: 479 MELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSS 538

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C++  + ++ + F+E      FP   ++  MI G L+ G+I SA      M+  G +PD
Sbjct: 539 LCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD 598

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             TY  LI+   K   LDEA  F++ MI  G  P
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 213/486 (43%), Gaps = 42/486 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +F + G++ E   ++ EM + GL         ++   C+ G ++  + +FDE+  RG
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A +Y  ++  +C++GR+ EA      M++RG   +  T T LI   C  G     K
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVG---KTK 334

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL  M++K  +PNV T+ ++I+ LCK      A  + ++L++    +P+  TY ++
Sbjct: 335 EALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI-VELMKKRRTRPDNITYNSL 393

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLM--- 393
           + G C +  ++ A  LL  M +      P+  ++ +LI+G CK     +A D+ DL+   
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453

Query: 394 --------------------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
                                                 PN   Y  +IDG CK G +  A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             LL K    EL      Y  LLS   K+    QA  LF  M +    PD+ ++  +I  
Sbjct: 514 KGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             +   +K +E        AGL P   TY+ +I  +L+ G +  A+ +F +M   G  PD
Sbjct: 574 SLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYCKQGDSATAMIIL 600
                +++     Q + D+  +F + ++ K +    E+T   + Y     G+   A  +L
Sbjct: 634 AHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693

Query: 601 ESLDKK 606
              D K
Sbjct: 694 RVADDK 699



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 16/395 (4%)

Query: 289 RKGWKPNVYTHTVLIDGLC-------KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           RK  + + + + V + GL        K G+      L LK      +  NV+ Y  ++ G
Sbjct: 96  RKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK----RGFAFNVYNYNILLKG 151

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C+  +  +A  LL  M++  L+P+  +Y ++I G C+    E+A  L + M   GC+ +
Sbjct: 152 LCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWS 211

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +  +ID  CK G++ EA  LLK+   + L+AD I YT L+       E  +   LF 
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFD 271

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            +++ G +P    Y TLI  FC+  ++KE+ + F+  +  G+ P   TYT +I G    G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVG 331

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
               A++    M Q    P+ +TY  +I+ LCK S + +A +  E M  +   P  +T  
Sbjct: 332 KTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYN 391

Query: 582 TLAYEYCKQG--DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           +L    C +G  D A+ ++ L   D       + + N LI  LC   R+  A   +  L+
Sbjct: 392 SLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451

Query: 637 GKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
            K    D V+   L N+  +S       +L ++I+
Sbjct: 452 EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 4/280 (1%)

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N E A+     M +     N  + + +++   +  +   A+ +L    +R    +   Y 
Sbjct: 87  NHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYN 146

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           ILL    +  E  +A+ L   M +  L PD+ +Y T+I  FC  K+++++ +   E   +
Sbjct: 147 ILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGS 206

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G   +  T+  +I  + + G +  A+   + M   G   D I Y +LI G C   +LD  
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRG 266

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
              ++ ++ +G SPC +T  TL   +CK G    A  I E + ++     + T   LI  
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDG 326

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYES 657
           LC   +   A    + +L KD+  + V+   + N  C +S
Sbjct: 327 LCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDS 366



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           +A N ++  L +    + A+   +K  + +   + ++ + LL   ++  +T  A G+   
Sbjct: 73  FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+K G   +++ Y  L+   CR  +  ++    +E     L P   +Y ++I G+     
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A++    M   GC+   +T+G LI   CK  K+DEA    + M  KG+    +   +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 583 LAYEYCKQG--DSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           L   +C  G  D   A+   +LE  D    I T NTLIR  C   R+  A+  F 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNTLIRGFCKLGRLKEASEIFE 306


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 216/468 (46%), Gaps = 12/468 (2%)

Query: 150 ERA----HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           ERA    H     M+    + G L+ GFS+  +M  +GL     T N ++   C  G + 
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 283

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + DEM ++ +  D  +Y ++     R G            L  G  + + T ++L+
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILL 343

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G    +  A E+L+ +V  G  P    +  LI+G C+ G  E AF  F ++ +S
Sbjct: 344 NGLCKDG---KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KS 399

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            + KP+  TY A+I+G CK E++  A+ LL  M++ G+ P   T+ +LI  + + G  E+
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            + ++  M + G  PN+ +Y +I++  CK G++ EA  +L   F +++  +   Y  ++ 
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +++     QA  L  +M   G++P I  Y  LI   C Q ++ E+E+         L P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              +Y ++I      GNI  A+   QRM++ G      TY  LISGL    +L E    Y
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           + M+   + P       +   Y K G+   A    E L K++  +  N
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA----EDLRKEMLQKRNN 683



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 8/474 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G L E   M+  M  +G P   + + N V+      G    A EVFDEM  R V  +  +
Sbjct: 174 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 233

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+  + + G +         M+  G   +  T  +L++  C  G  G   +   LL+
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG---ETSALLD 290

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +   P+ +T+++L DGL + G ++    LF K ++ +      +T + +++G CK+
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK-NGVTIGDYTCSILLNGLCKD 349

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K++ AE +L+ +   GL+P    Y +LI G+C+ G  E A+     M      P+   Y
Sbjct: 350 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITY 409

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           NA+I+GLCK  R+  A +LL +     +     T+  L+  + +  + ++   +   M +
Sbjct: 410 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 469

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL P++ +Y +++ AFC+  K+ E+     +     + P  + Y ++I  Y+  G    
Sbjct: 470 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 529

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A    ++M   G +P  +TY  LI GLC QS++ EA +   S+    + P  V+  TL  
Sbjct: 530 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 589

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             C +G+   A+ + + + K   K  +RT + LI  L    R+      + K++
Sbjct: 590 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 205/463 (44%), Gaps = 6/463 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F  + + G   D  ++   V A    G + EA   L  M   GA   NA    ++ A   
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           +  RG    A E+ +EM  +   PN  T+  +IDG  K G  E  F L  ++V     KP
Sbjct: 208 RAGRGG--DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV-CHGLKP 264

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  TY  ++SG C+  +M     LL+ M  Q ++P+  TY+ L  G  + G+ +    L 
Sbjct: 265 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 324

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
               K G T   Y  + +++GLCK G+V  A E+L+      L   ++ Y  L++ + + 
Sbjct: 325 GKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 384

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E + A   F +M    + PD   Y  LI   C+ +++  ++    E    G+ PT ET+
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I  Y R G +         M + G  P+ ++YG++++  CK  K+ EA    + M  
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGM 627
           K + P       +   Y + G +  A I++E +        I T N LI+ LC++ ++  
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 564

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           A    + L       D VS   L +AC          DL QR+
Sbjct: 565 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 607



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 6/371 (1%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    +++AF +L      G +P+ +     +      G   +A  +  ++ R     PN
Sbjct: 139 GRHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPN 195

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             +Y  +I+G  +  +   A  + + M E+ +LPN  TY ++I GH K G+ E  + L D
Sbjct: 196 AFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRD 255

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  PN   YN ++ GLC+ GR+ E   LL +   +++  D  TY+IL     +  
Sbjct: 256 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 315

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           ++K  L LF + +K G+    +  + L+   C+  K+  +E+  Q  + AGL PT+  Y 
Sbjct: 316 DSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 375

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I GY + G +  A   F +M      PD+ITY ALI+GLCK  ++  A      M   
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMA 628
           G++P   T  TL   Y + G      I+L  + +   K  + +  +++   C   ++  A
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495

Query: 629 ALFFHKLLGKD 639
                 +  KD
Sbjct: 496 VAILDDMFHKD 506



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 19/346 (5%)

Query: 141 TSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLP 185
             L  +G    A EV+Q +V++               + + G L+  FS   +M +  + 
Sbjct: 344 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 403

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T N ++   C+   +  A+++  EM   GV     ++  ++ AY R G++ +    
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           LS M + G   +  +   ++ AFC  G    I +A  +L++M  K   PN   +  +ID 
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNG---KIPEAVAILDDMFHKDVLPNAQVYNAIIDA 520

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             + G  ++AF L  K+ +S+   P++ TY  +I G C + +++ AE ++  +    L+P
Sbjct: 521 YVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  +Y +LI   C  GN ++A DL   M K G    +  Y+ +I GL   GR+ E   L 
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           +K  Q  +      + I++  + K     +A  L   M++   N D
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 229/467 (49%), Gaps = 12/467 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E  +L++  S + +      P I S +N ++   C++GL++ A   F  M   G
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVGPSIVS-INTIMSKFCKVGLIDVARSFFCLMVKNG 301

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ SY +++   C  G + EA  +   M   G   D  T   L   F      G + 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL---LLGLMS 358

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +++++M+ +G  P++ T+T LI G C+ G  E+A +L  + + S  +K NV  Y  +
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETL-SRGFKLNVIFYNML 417

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +S  CK  ++  A  L + M+   L P+   Y+ LI+G CK G  +RAY L + M  +  
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +A  A++ GL K G + EA        + +L  D + Y I++  +++     +A+ 
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+ +M++ G+ P +  + TLI  FCR+  + E+ K  +     GL P+  TYT+++  Y 
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             GN+     +   M      P ++TY  LI GLC+Q+K+ E+ Q  E M  KG+ P  V
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 579 TRVTLAYEYCKQGDSATA-----MIILESLDKKLWIRTVNTLIRKLC 620
           T  T+   +CK  +   A     M++L + D      T   LI  LC
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQV--TYKVLINALC 702



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 237/511 (46%), Gaps = 8/511 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E      +M  +G+     T N +      LGL+  A +V  +M  +G+  D  +Y
Sbjct: 320 GSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTY 379

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +C+MG + EA +     L RG  L+     +L++  C  G    I++A  L +E
Sbjct: 380 TTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG---RIEEALTLFDE 436

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M     +P+   +++LI GLCK+G+ ++A++L+ ++ R     P+     A++ G  K  
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM-RLKRKFPHHFAQRAVLLGLFKNG 495

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A    +      L+ +   Y  +I G+ ++     A  L   M + G TP++  +N
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G C++G + EA ++L+    + L    +TYT L++ + +    ++       M   
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P    YT LI   CRQ KM ES +  +     GL P   TY ++I  + +   I+ A
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ +  M    C P  +TY  LI+ LC    L +  +   S+  + I+  +VT +T+   
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKA 735

Query: 587 YCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +C +G  + A+     +  K   + IR  + +I +LC    +  A  FF  +L +    D
Sbjct: 736 HCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795

Query: 644 RVSLAALKNACY-ESNKYALFSDLSQRIAEG 673
                 + NA + + N  ++F  L+  +  G
Sbjct: 796 PEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 215/452 (47%), Gaps = 6/452 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++G ++E   +  E  + G  L     N ++   C++G +E A  +FDEM    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCDKGFRGSI 277
           +  D   Y +++   C+ G V  A +    M L R      A   +L+  F +    G+I
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN----GNI 497

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A    +   R     +V  + ++IDG  +     +A +L+ K++      P+V T+  
Sbjct: 498 SEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER-GITPSVVTFNT 556

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+C+   +  A  +LE ++ +GL+P+  TYT+L+  +C+VGN +  +  +  M    
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P    Y  +I GLC++ ++ E+ +LL+  + + L  D +TY  ++    K  E  +AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+    +P    Y  LI A C    +K+ ++         +   K TY ++I  +
Sbjct: 677 QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAH 736

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G +S A+ YF +M   G       Y A+I+ LCK+  + EA  F+  M+ +G++P  
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
               T+   + +QG++++    L  + K  +I
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 5/389 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           GA     T ++LI   C++     ++ A   L +   K   P++ +   ++   CK G  
Sbjct: 232 GAPQSECTTSILIHGLCEQS---KLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLI 287

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A R F  L+  +    +  +Y  ++ G C    M+ A    + M++ G+ P+  TY +
Sbjct: 288 DVA-RSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L  G   +G    A  ++  M  +G  P++  Y  +I G C+ G ++EA +L ++   R 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + I Y +LLS   K    ++AL LF  M    L PD   Y+ LI   C++  ++ + 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + +++      FP      +++ G  ++GNIS A  YF    ++    D + Y  +I G 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            +   + EA Q Y  MI +GI+P  VT  TL   +C++GD   A  +LE +  K  + +V
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
            T    + +   VG     FH L   + N
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 141/352 (40%), Gaps = 35/352 (9%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           GFR SI   F +   +  KG    +   +V+ + +  +G    +    L L +  N+  N
Sbjct: 112 GFRHSIFSQFVVSHILAGKGRFKEL--DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSN 169

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS------------------- 372
              +  +   Y + E ++ A  ++ +MK+     +  TY S                   
Sbjct: 170 GLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIK 229

Query: 373 -------------LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                        LI+G C+    E A   +    K    P+I + N I+   CK G + 
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLID 288

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A        +  L  D  +Y ILL          +ALG    M K G+ PD+  Y TL 
Sbjct: 289 VARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLA 348

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             F     M  + K  Q+ +  GL P   TYT++ICG+ + GNI  A+K  Q     G  
Sbjct: 349 KGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            + I Y  L+S LCK  +++EA   ++ M    + P  +    L +  CK+G
Sbjct: 409 LNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++       ++ E   ++  M   GL   + T N ++   C+   +  A +++
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M          +YK+++ A C  G + + DR + ++ DR   L   T   +I A C K
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAK 739

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G + +A     +M+ KG+  ++  ++ +I+ LCK+G   +A + F  ++ S+   P+
Sbjct: 740 ---GQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA-KYFFVMMLSEGVTPD 795



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           + ++++    G LK+   MV+ + +  + L   T   ++   C  G V  A   F++M A
Sbjct: 695 KVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLA 754

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G       Y  ++   C+ G +TEA  +   ML  G   D      ++ AF  +G   S
Sbjct: 755 KGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSS 814

Query: 277 IKQAFELLEEMVRKGW 292
           +   FE L  +V+ G+
Sbjct: 815 V---FEFLAMVVKSGF 827


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 229/467 (49%), Gaps = 12/467 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E  +L++  S + +      P I S +N ++   C++GL++ A   F  M   G
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVGPSIVS-INTIMSKFCKVGLIDVARSXFCLMVKNG 301

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ SY +++   C  G + EA  +   M   G   D  T   L   F      G + 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL---LLGLMS 358

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +++++M+ +G  P++ T+T LI G C+ G  E+A +L  + + S  +K NV  Y  +
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETL-SRGFKLNVIFYNML 417

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +S  CK  ++  A  L + M+   L P+   Y+ LI+G CK G  +RAY L + M  +  
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +A  A++ GL K G + EA        + +L  D + Y I++  +++     +A+ 
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+ +M++ G+ P +  + TLI  FCR+  + E+ K  +     GL P+  TYT+++  Y 
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             GN+     +   M      P ++TY  LI GLC+Q+K+ E+ Q  E M  KG+ P  V
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 579 TRVTLAYEYCKQGDSATA-----MIILESLDKKLWIRTVNTLIRKLC 620
           T  T+   +CK  +   A     M++L + D      T   LI  LC
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQV--TYKVLINALC 702



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 236/511 (46%), Gaps = 8/511 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E      +M  +G+     T N +      LGL+  A +V  +M  +G+  D  +Y
Sbjct: 320 GSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTY 379

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +C+MG + EA +     L RG  L+     +L++  C  G    I++A  L +E
Sbjct: 380 TTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG---RIEEALTLFDE 436

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M     +P+   +++LI GLCK+G+ ++A++L+ ++ R     P+     A++ G  K  
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM-RLKRKFPHHFAQRAVLLGLFKNG 495

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A    +      L+ +   Y  +I G+ ++     A  L   M + G TP++  +N
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G C++G + EA ++L+    + L    +TYT L++ + +    ++       M   
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P    YT LI   CRQ KM ES +  +     GL P   TY ++I  + +   I+ A
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ +  M    C P  +TY  LI+ LC    L +  +   S+  + I+  + T +T+   
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKA 735

Query: 587 YCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +C +G  + A+     +  K   + IR  + +I +LC    +  A  FF  +L +    D
Sbjct: 736 HCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795

Query: 644 RVSLAALKNACY-ESNKYALFSDLSQRIAEG 673
                 + NA + + N  ++F  L+  +  G
Sbjct: 796 PEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 215/452 (47%), Gaps = 6/452 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++G ++E   +  E  + G  L     N ++   C++G +E A  +FDEM    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM-LDRGAILDNATLTLLITAFCDKGFRGSI 277
           +  D   Y +++   C+ G V  A +    M L R      A   +L+  F +    G+I
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN----GNI 497

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A    +   R     +V  + ++IDG  +     +A +L+ K++      P+V T+  
Sbjct: 498 SEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER-GITPSVVTFNT 556

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+C+   +  A  +LE ++ +GL+P+  TYT+L+  +C+VGN +  +  +  M    
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P    Y  +I GLC++ ++ E+ +LL+  + + L  D +TY  ++    K  E  +AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+    +P    Y  LI A C    +K+ ++         +   K TY ++I  +
Sbjct: 677 QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAH 736

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G +S A+ YF +M   G       Y A+I+ LCK+  + EA  F+  M+ +G++P  
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
               T+   + +QG++++    L  + K  +I
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 180/389 (46%), Gaps = 5/389 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           GA     T ++LI   C++     ++ A   L +   K   P++ +   ++   CK G  
Sbjct: 232 GAPQSECTTSILIHGLCEQS---KLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLI 287

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A   F  +V+ +    +  +Y  ++ G C    M+ A    + M++ G+ P+  TY +
Sbjct: 288 DVARSXFCLMVK-NGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L  G   +G    A  ++  M  +G  P++  Y  +I G C+ G ++EA +L ++   R 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + I Y +LLS   K    ++AL LF  M    L PD   Y+ LI   C++  ++ + 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + +++      FP      +++ G  ++GNIS A  YF    ++    D + Y  +I G 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            +   + EA Q Y  MI +GI+P  VT  TL   +C++GD   A  +LE +  K  + +V
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
            T    + +   VG     FH L   + N
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 141/352 (40%), Gaps = 35/352 (9%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           GFR SI   F +   +  KG    +   +V+ + +  +G    +    L L +  N+  N
Sbjct: 112 GFRHSIFSQFVVSHILAGKGRFKEL--DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSN 169

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS------------------- 372
              +  +   Y + E ++ A  ++ +MK+     +  TY S                   
Sbjct: 170 GLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIK 229

Query: 373 -------------LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                        LI+G C+    E A   +    K    P+I + N I+   CK G + 
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLID 288

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A        +  L  D  +Y ILL          +ALG    M K G+ PD+  Y TL 
Sbjct: 289 VARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLA 348

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             F     M  + K  Q+ +  GL P   TYT++ICG+ + GNI  A+K  Q     G  
Sbjct: 349 KGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            + I Y  L+S LCK  +++EA   ++ M    + P  +    L +  CK+G
Sbjct: 409 LNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++       ++ E   ++  M   GL   + T N ++   C+   +  A +++
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M          +YK+++ A C  G + + DR + ++ DR   L   T   +I A C K
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAK 739

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G + +A     +M+ KG+  ++  ++ +I+ LCK+G   +A + F  ++ S+   P+
Sbjct: 740 ---GQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA-KYFFVMMLSEGVTPD 795



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           + ++++    G LK+   MV+ + +  + L   T   ++   C  G V  A   F++M A
Sbjct: 695 KVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLA 754

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G       Y  ++   C+ G +TEA  +   ML  G   D      ++ AF  +G   S
Sbjct: 755 KGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSS 814

Query: 277 IKQAFELLEEMVRKGW 292
           +   FE L  +V+ G+
Sbjct: 815 V---FEFLAMVVKSGF 827


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 217/438 (49%), Gaps = 10/438 (2%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATL 261
           L E A   F++M  RG+   ++++  +++   +     +A R  +    +G + LD  + 
Sbjct: 110 LPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKGNVKLDVYSF 167

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            ++I   C+ G+   + + FE+L +M   G  PNV  +T LIDG CK G  E+  +LF K
Sbjct: 168 GIMIKGCCEVGY---LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYK 224

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +   D    N +TYT +I+G+ K         L E+MK  G++PN  TY S+I   C  G
Sbjct: 225 MGELD-VVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 283

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
               A++L D M + G   N+  YN +I GLC++ RV EA  L+ +  +  L  + I+Y 
Sbjct: 284 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  +       +A  LF +M  +G +P +  Y  LIA F   K         +E    
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 403

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P+K TYT ++   +R  NI  A + +  M + G   D   YG LI GLC    + EA
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRK 618
            + ++S+    + P +V   T+ Y YCK+G S  A+ +L+ + +   +  V   N+ I+ 
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQI 523

Query: 619 LCSEKRVGMAALFFHKLL 636
           LC +++   A +    ++
Sbjct: 524 LCKDEKWTEAEVLLKDMI 541



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 186/377 (49%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE+G ++   EV  +M   G+  +   Y  ++   C+ G +    +    M +   + + 
Sbjct: 175 CEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQ 234

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI  F   G +   K   EL E+M   G  PNVYT+  +I   C  G    AF L
Sbjct: 235 YTYTVLINGFFKMGLK---KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFEL 291

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R      NV TY  +I G C+E ++  AE L+ RMK  GL PN  +Y +LI G+C
Sbjct: 292 FDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 350

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            +GN ++A  L + M   G +P++  YN +I G  +        +++++   R L   K+
Sbjct: 351 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL+   ++    ++A  ++  M KAGL  DI+ Y  LI   C    MKE+ K F+  
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P    Y +MI GY ++G+   A++  + M + G  P+  +Y + I  LCK  K 
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKW 530

Query: 559 DEACQFYESMIGKGISP 575
            EA    + MI  G+ P
Sbjct: 531 TEAEVLLKDMIELGLKP 547



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 39/383 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    E+G L +GF ++ +M   GL         ++   C+ G +E  +++F +M    
Sbjct: 170 MIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELD 229

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  +Y +++  + +MG   +       M   G + +  T   +I   C+    G + 
Sbjct: 230 VVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND---GKLN 286

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AFEL +EM  +G   NV T+  LI GLC++    +A RL  ++ R D   PN+ +Y  +
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR-DGLSPNLISYNTL 345

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH--------------------- 377
           I GYC    +++A  L  +MK  G  P+  TY  LI G                      
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 405

Query: 378 --------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                          +  N E+A+ +   M K G   +IY Y  +I GLC  G ++EA +
Sbjct: 406 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 465

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L K   +  L+ + + Y  ++  + K+  + +AL L   M + G+ P++ +Y + I   C
Sbjct: 466 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILC 525

Query: 484 RQKKMKESEKFFQEAITAGLFPT 506
           + +K  E+E   ++ I  GL P+
Sbjct: 526 KDEKWTEAEVLLKDMIELGLKPS 548



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 34/315 (10%)

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL------------ 373
           D++  +V  + A+I+ + + +   +A     +M  +GL+P +NT+ +L            
Sbjct: 89  DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148

Query: 374 ----------------------IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
                                 I G C+VG  ++ ++++  M + G +PN+  Y  +IDG
Sbjct: 149 AWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 208

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK G ++   +L  K  + ++ A++ TYT+L++   K    K  + L+ +M   G+ P+
Sbjct: 209 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 268

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ Y ++I   C   K+  + + F E    G+     TY ++I G  ++  +  A +   
Sbjct: 269 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 328

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           RM + G +P+ I+Y  LI G C    LD+A   +  M   G SP   T   L   + +  
Sbjct: 329 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 388

Query: 592 DSATAMIILESLDKK 606
           +SA    ++  ++ +
Sbjct: 389 NSAGVTDMVREMEAR 403


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 203/381 (53%), Gaps = 4/381 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C  G ++   ++  EM  +G+  +  +Y  +++  C+ G+V +A+R L  M+++G
Sbjct: 16  VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            + D    T LI  FC     G+I+ A++L +EM ++   P+   +T +I GLC+ G   
Sbjct: 76  IVPDTVVYTTLIDGFCK---LGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++F K+  S   +P+  TYT +I GYCK  +M +A  L  +M + GL PN  TYT+L
Sbjct: 133 EADKVFNKMF-SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
             G CK+G  + A +L+  M  +G   NI  YN++++GLCK G +++A +L+++     +
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D IT+T L+  + K  E  +A  L   M+  GL P +  +  L+  FC    +++ E+
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                +  G+ P   TY S++  Y    N+    + ++ M   G  PD+ TY  LI G C
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371

Query: 554 KQSKLDEACQFYESMIGKGIS 574
           K   + EA   ++ M  KG +
Sbjct: 372 KARNMKEAWFLHKEMAEKGFN 392



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 199/390 (51%), Gaps = 4/390 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG   D  SY  ++  YC  G + +  + +  M  +G   +  T   +I   C  G    
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG---K 60

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +L EM+ +G  P+   +T LIDG CK G  + A++LF ++ +     P+   YT
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYT 119

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           A+I G C+  KM  A+ +  +M  +G+ P+  TYT+LI G+CK G  E+A+ L + M + 
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G TPN+  Y A+ DGLCK G+V  A ELL +   + LQ +  TY  L++   K    +QA
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + L   M  AG+ PD   +TTL+ A+C+  +M ++ +  +E +  GL PT  T+  ++ G
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           +   G +    +    M + G  P+  TY +L+   C ++ +    + Y+ M  +G+ P 
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPD 359

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             T   L   +CK  +   A  + + + +K
Sbjct: 360 SNTYNILIKGHCKARNMKEAWFLHKEMAEK 389



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 185/341 (54%), Gaps = 18/341 (5%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           +G  P+V +++ +I+G C  G  +K  +L  ++ +    KPN++TY ++I   CK  K++
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSGKVD 62

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE +L  M  QG++P+T  YT+LI G CK+GN + AY L D M K+   P+  AY A+I
Sbjct: 63  DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVI 122

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC+ G++ EA ++  K F R ++ D++TYT L+  + K  E ++A  L  +MV++GL 
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLT 182

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++  YT L    C+  ++  + +   E    GL     TY S++ G  + GNI  AVK 
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKL 242

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            + M   G  PD IT+  L+   CK  ++ +A +    M+ +G+ P  +T   L   +C 
Sbjct: 243 MEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCM 302

Query: 590 QGDSATAMIILESLDKKL-WI---------RTVNTLIRKLC 620
            G       +LE  ++ L W+          T N+L+++ C
Sbjct: 303 SG-------MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 197/384 (51%), Gaps = 4/384 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ +   ++ EM N G+   T     ++   C+LG ++ A ++FDEM  + +  D  +Y
Sbjct: 59  GKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAY 118

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G++ EAD+  + M  RG   D  T T LI  +C  G    +++AF L  +
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSG---EMEKAFSLHNQ 175

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV+ G  PNV T+T L DGLCK G  + A  L  ++      + N+ TY ++++G CK  
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC-GKGLQLNICTYNSLVNGLCKSG 234

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + +A  L+E M+  G+ P+T T+T+L+  +CK G   +A++L+  M   G  P +  +N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++G C  G +++   LL    ++ +  +  TY  L+ ++  +   +    ++  M   
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD + Y  LI   C+ + MKE+    +E    G   T  +Y S+I G+ +   IS A
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414

Query: 527 VKYFQRMNQIGCAPDNITYGALIS 550
            + F+ M + G A D   Y   + 
Sbjct: 415 RELFEEMRREGMAADAEIYNLFVD 438



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 3/299 (1%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           MK +G  P+  +Y+++I G+C  G  ++   L+  M  +G  PN+Y YN+II  LCK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V +A  +L++   + +  D + YT L+    K    + A  LF  M K  + PD  AYT 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I   CR  KM E++K F +  + G+ P + TYT++I GY + G +  A     +M Q G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+ +TY AL  GLCK  ++D A +    M GKG+     T  +L    CK G+   A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 598 IILESLD-KKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++E ++   ++  T+   TL+   C    +  A     ++L +      ++   L N 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 151/301 (50%), Gaps = 4/301 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G +++ FS+  +M  +GL     T   +    C+LG V+ A E+  EMC +G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +V   C+ G + +A + +  M   G   D  T T L+ A+C     G + 
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKT---GEMV 272

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL EM+ +G +P V T  VL++G C  G  E   RL L  +      PN  TY ++
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL-LAWMLEKGIMPNTTTYNSL 331

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC    M     + + M  +G++P++NTY  LI GHCK  N + A+ L   M ++G 
Sbjct: 332 MKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGF 391

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                +YN+II G  KK ++ EA EL ++  +  + AD   Y + +     +   + AL 
Sbjct: 392 NLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALE 451

Query: 459 L 459
           L
Sbjct: 452 L 452



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 4/341 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++      G++ E   +  +M + G+     T   ++   C+ G +E A  + ++M   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  +    C++G+V  A+  L  M  +G  L+  T   L+   C     G+I+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS---GNIR 237

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L+EEM   G  P+  T T L+D  CK G   KA  L  +++     +P V T+  +
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML-DRGLQPTVITFNVL 296

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G+C    +   E LL  M E+G++PNT TY SL+  +C   N     ++   M   G 
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +I G CK   ++EA+ L K+  ++       +Y  ++    K+ +  +A  
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           LF  M + G+  D   Y   +     +  M+ + +   EAI
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 226/483 (46%), Gaps = 41/483 (8%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +  ++  + +S+    R+   FS++      G+P    T N ++G       V  A  +F
Sbjct: 96  SDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLF 155

Query: 212 DEMCARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            ++    +C  +   Y  ++    + G   +    L  M       D  T +++I A C 
Sbjct: 156 KKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCK 215

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                ++  A  LL EM +K   PN++T+  LIDGLCK G  EK   L  ++V   N  P
Sbjct: 216 D---INLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL-NINP 271

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NVHT++ +I G CKE K+  A+ ++  M E+G+ P+  TY++++ G+C  G  +RA  + 
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           +++  +G  PNI++Y+ +I+G CKK  + +A +L  +  Q+ L+ D +TY+ +L   ++ 
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEV 391

Query: 451 AETKQALGLFCRMVKAGLNPDI--HA---------------------------------Y 475
                A  +F  M++ G  PDI  H+                                 Y
Sbjct: 392 GRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFY 451

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           T +I   C+  +++E+   F++  + GL P   TY  MI G+ R+G         ++M  
Sbjct: 452 TVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMED 511

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            GC  +NITY  ++ G  + +K+ E   F + M G+G S  + T   +     K+  S  
Sbjct: 512 NGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFS-FDATTTGVLINVLKENPSIV 570

Query: 596 AMI 598
            MI
Sbjct: 571 DMI 573



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 191/386 (49%), Gaps = 6/386 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G  + ++ L ++  ++C    R  I  AF +L   ++ G   NV T   L+ GL  +   
Sbjct: 92  GIPISDSILNIVTNSYC---LRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKV 148

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
             A  LF KLVR    +PN   Y  +++G  K     +   LL  M++    P+  TY+ 
Sbjct: 149 TDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSI 208

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   CK  N + A +L++ M ++   PNI+ YN++IDGLCK G+ ++   LL +     
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  +  T++IL+    K+ + + A  +   M++ G+ PDI  Y+ ++  +C + ++  + 
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRAR 328

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F      G+ P   +Y+ +I GY +  N++ A++ F  ++Q G  PD +TY  ++ GL
Sbjct: 329 RVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGL 388

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
            +  ++ +A + ++ M+  G +P      TL + Y K G    AM++   L++      I
Sbjct: 389 IEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNI 448

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
                +I  LC   RV  A   F KL
Sbjct: 449 SFYTVVINGLCKNDRVREAHAIFEKL 474



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 181/378 (47%), Gaps = 5/378 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++  GN +        ++ +  +   L    +++ EM    +P    T N ++   C+LG
Sbjct: 193 IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLG 252

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
             E  + +  EM    +  +  ++ +++   C+ G+V +AD  +  M+++G   D  T +
Sbjct: 253 QWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYS 312

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++  +C    RG + +A  +   +  KG KPN++++++LI+G CKK    KA +LF + 
Sbjct: 313 AIMDGYC---LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE- 368

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +     KP+  TY+ ++ G  +  ++  A+ + + M   G  P+   +++L++G+ K G 
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A  L   + +     NI  Y  +I+GLCK  RV+EA+ + +K     L  D  TY +
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++   ++    +  G+  +M   G   +   Y  ++  F R  K+ E   F +E    G
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548

Query: 503 LFPTKETYTSMICGYLRD 520
            F    T T ++   L++
Sbjct: 549 -FSFDATTTGVLINVLKE 565



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 6/190 (3%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ LF RMV+    P +  ++ L       K        F+E    G+ P  ++  +++
Sbjct: 45  DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI-PISDSILNIV 103

Query: 515 CG-YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
              Y     I  A        + G   + +T+  L+ GL  ++K+ +A   ++ ++ + I
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 574 -SPCEVTRVTLAYEYCKQGDSA---TAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
             P EV   T+     K+G +    + + I+E  + K  +RT + +I  LC +  +  A 
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 630 LFFHKLLGKD 639
              +++  K+
Sbjct: 224 NLLNEMKQKN 233


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 206/394 (52%), Gaps = 4/394 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+  D  S  +++  +CR+  V      L  ++  G   +  T + LI  FC   
Sbjct: 116 QMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFC--- 172

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A EL + MV +G+KPNV++++++I GLC+ G T +  +L L+ ++    +P+V
Sbjct: 173 IEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKL-LEHMKVVGCEPDV 231

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  ++   CK+  +N A  +  +MK  G+LP   TYTSLI+G   +G ++ A+ L++ 
Sbjct: 232 VIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNE 291

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      P++ A++ +ID +CK+G V EA  +LK   +  ++ D  TY  L++ +  + E
Sbjct: 292 MKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRME 351

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +F  M+  G  PD+ +++ L+  +C+ K++ E+++ F E    GL P   +Y +
Sbjct: 352 VVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNT 411

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  +      A + F+ M+  G  P+ +TY  L+  L KQ  LD+A   + +M   G
Sbjct: 412 LISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG 471

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           + P  VT   +    CK G    A  +   L  K
Sbjct: 472 LKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK 505



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 197/423 (46%), Gaps = 35/423 (8%)

Query: 152 AHEVMQ--CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           +H+V+    +++ F  +  +  GFS++ ++   GL     T + ++   C  G +  A E
Sbjct: 123 SHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIE 182

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FD M ARG   +  SY +++   CR+G+ TE  + L  M   G   D      ++   C
Sbjct: 183 LFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLC 242

Query: 270 DK------------------------------GFR--GSIKQAFELLEEMVRKGWKPNVY 297
                                           G R  G  K+AF LL EM      P++ 
Sbjct: 243 KDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLV 302

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
             +VLID +CK+G   +A R+ LK +     +P+V TY  +++GYC   ++  A  + E 
Sbjct: 303 AFSVLIDIMCKEGEVSEA-RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEV 361

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G +P+  +++ L+ G+CK    + A  L D M   G  P+  +YN +I GLC+  R
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             EA EL K         + +TY+ILL    KQ    QA+GLF  M  +GL PD+  Y  
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I   C+  K K++ + F E    GL P     T  I G  + G +  A K F++M +  
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541

Query: 538 CAP 540
           C+P
Sbjct: 542 CSP 544



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 53/351 (15%)

Query: 318 LFLKLVRSDNYKP---------------NVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           LF  LVR  +YK                +V + T +I+ +C+   ++    +L ++ + G
Sbjct: 97  LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L PN  T+++LI G C  G   RA +L D+M   G  PN+++Y+ II GLC+ G+  E  
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +LL                    EH+K                 G  PD+  Y T++   
Sbjct: 217 KLL--------------------EHMKVV---------------GCEPDVVIYNTIVDRL 241

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+ + + E+   F +    G+ PT  TYTS+I G    G    A      M      PD 
Sbjct: 242 CKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDL 301

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           + +  LI  +CK+ ++ EA    ++M   G+ P   T  TL   YC + +   A  + E 
Sbjct: 302 VAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEV 361

Query: 603 LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +  K  +  V   + L+   C  KR+  A   F ++  +    D VS   L
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 144/329 (43%), Gaps = 7/329 (2%)

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +N A      M     LP+   +  L     ++ +++    L   M   G + ++ +   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+  C+   V   + +L K  +  L+ + IT++ L++    + +  +A+ LF  MV  G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             P++H+Y+ +I   CR  K  E  K  +     G  P    Y +++    +D  ++ AV
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F +M   G  P  +TY +LI GL    +  EA      M G  I P  V    L    
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 588 CKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           CK+G+ + A +IL+++ +   +  + T NTL+   C    V  A   F  ++ K +  D 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 645 VSLAALKNACYESNKY----ALFSDLSQR 669
            S + L N   ++ +      LF +++ R
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHR 400


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 248/533 (46%), Gaps = 41/533 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNN--GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+++A+ G L +   M   +      LP +T   NR++ +  E    + A +++DEM  
Sbjct: 139 LVAAYADAGMLGKATDMCERLREQYGSLPEVTHC-NRLLKLLVEQRRWDDARKLYDEMLG 197

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD------ 270
               AD  S  ++V   C  GRV E  + + A    G I       +LI  +C       
Sbjct: 198 EDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 257

Query: 271 ----------KGF----------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                     KGF                +G +++   L  EM ++G  PNV  +  +ID
Sbjct: 258 GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVID 317

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            LCK  W+     + LK + +    P++ T+  +I+G C E  + +AE  L     + L 
Sbjct: 318 ALCK-CWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELN 376

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDL-MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           PN  +YT LI+G C  G    A DL M++MG+ G TP++  + A+I GL   G+V EA  
Sbjct: 377 PNQLSYTPLIHGFCMRGELMAASDLLMEMMGR-GHTPDVVTFGALIHGLVVAGKVSEALI 435

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           + +K  +R++  D   Y +L+S   K+     A  +   M++  + PD   Y TLI  F 
Sbjct: 436 VREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 495

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R + + ++ K F+     G+ P   +  +MI GY + G +S A+     M ++GC PD  
Sbjct: 496 RSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 555

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +ISG  KQ  L+ A ++   MI +   P  VT  +L   YCK GD+ +A  +  ++
Sbjct: 556 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM 615

Query: 604 DKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             +     + T   LI  L  + +V  A L+F  +L    + + V+L  L N 
Sbjct: 616 QAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 668



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 212/495 (42%), Gaps = 56/495 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G L++  S+ +EM   GL       N V+   C+      A  +  +M A G
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++   C  G V +A+ +L   + R    +  + T LI  FC    RG + 
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFC---MRGELM 396

Query: 279 QAFELLEEMVRKGWKPNVYT-----------------------------------HTVLI 303
            A +LL EM+ +G  P+V T                                   + VLI
Sbjct: 397 AASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 456

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLCKK     A  +  +++   N +P+   Y  +I G+ + E +  A  + E M+ +G+
Sbjct: 457 SGLCKKHMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  +  ++I G+C+ G    A   M  M K GC P+ + Y  +I G  K+G +  A  
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 575

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            L    +R+ + + +TY+ L++ + K  +T  A GLF  M    L+P++  YT LI +  
Sbjct: 576 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 635

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR----------------DGNISSAV 527
           ++ K+  +  +F+  +     P   T   ++ G                    G  +  V
Sbjct: 636 KKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLV 695

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
            + + +  IG  P N  Y A+I  LC+ + L EA  F   M  KG  P  +T ++L Y +
Sbjct: 696 VFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 754

Query: 588 CKQGDSATAMIILES 602
           C  G S     IL +
Sbjct: 755 CSVGKSMNWRTILPN 769



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 158/372 (42%), Gaps = 3/372 (0%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           + L+ M   G  P       L+      G   KA  +  +L       P V     ++  
Sbjct: 119 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 178

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             ++ + + A  L + M  +    +  +   L+ G C  G  E    L++     GC P+
Sbjct: 179 LVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPH 238

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  YN +IDG C++G +     LL +   +      +TY  L++   K+ + ++   LF 
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M K GL+P++  Y ++I A C+     ++    ++   +G  P   T+ ++I G   +G
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 358

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           ++  A  + +   +    P+ ++Y  LI G C + +L  A      M+G+G +P  VT  
Sbjct: 359 HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFG 418

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGK 638
            L +     G  + A+I+ E + ++     V   N LI  LC +  +  A     ++L K
Sbjct: 419 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEK 478

Query: 639 DQNVDRVSLAAL 650
           +   D    A L
Sbjct: 479 NVQPDEFVYATL 490



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 54/276 (19%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A ++F+ M  +GV  D  S   M+  YC+ G ++EA   +S M   G I D  T T +I+
Sbjct: 503 ARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 562

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +  +G   ++  A   L +M+++  KPNV T++ LI+G CK G T+ A  LF  + +++
Sbjct: 563 GYAKQG---NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-QAE 618

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERM---------------------------- 358
              PNV TYT +I    K++K+ RA +  E M                            
Sbjct: 619 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 678

Query: 359 ----------KEQGLL------------PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
                      +  LL            P  + Y ++I+  C+      A D  + M K+
Sbjct: 679 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 738

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           G  PN   + +++ G C  G+      +L   FQ+E
Sbjct: 739 GYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQE 774



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 8/274 (2%)

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY-T 441
           F+   D +  M   G  P      A++      G + +A ++ ++  ++     ++T+  
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            LL   ++Q     A  L+  M+      D ++   L+   C + +++E  K  +    A
Sbjct: 174 RLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGA 233

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P    Y  +I GY R G++   +     M   G  P  +TYG+LI+ L K+  L++ 
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKI 293

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLI 616
              +  M  +G+SP      ++    CK   +  AM+IL+ +     D    I T NTLI
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD--IITFNTLI 351

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             LC E  V  A  F  + + ++ N +++S   L
Sbjct: 352 TGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 385



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 70/182 (38%), Gaps = 36/182 (19%)

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +P   A++TL+    R ++    +   Q    AG  PT+    +++  Y   G +  A  
Sbjct: 95  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATD 154

Query: 529 YFQRM-NQIGCAP-----------------------------------DNITYGALISGL 552
             +R+  Q G  P                                   DN +   L+ GL
Sbjct: 155 MCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGL 214

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           C + +++E  +  E+  G G  P  V    L   YC++GD    +++L  ++ K ++ T+
Sbjct: 215 CLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274

Query: 613 NT 614
            T
Sbjct: 275 VT 276


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 188/401 (46%), Gaps = 8/401 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C    +  A      M   G   DA ++  ++V YCR  +V  A      M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             RG   D  +   LI  FC+ G    I +A EL  EM     +P+++ +  L+ GLCK 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETG---RIDEAVELFGEMD----QPDMHMYAALVKGLCKA 125

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+   L L+ ++   ++P+   Y A++   C E K   AE +L+ M E+GL P   T
Sbjct: 126 GRGEEGL-LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVT 184

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
            T++I  +CK G    A  +++LM   GC PN++ YNA++ G C +G+V +A  LL K  
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D +TY +L+         + A  L   M   GL  D + Y  LI A C+  +  
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++   F    T G+ P   T+ S+I G  + G +  A K+ ++M   GC PD  TY + I
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             LCK     E   F   M+ K + P  V    + ++  K+
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 221/451 (49%), Gaps = 11/451 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR +EG  M+  M   G    T     VV   C     + AEE+  EM  +G
Sbjct: 118 LVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKG 177

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +   ++ AYC+ GR+++A R L  M  RG   +  T   L+  FC++G    + 
Sbjct: 178 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVH 234

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL +M   G  P+  T+ +LI G C  G  E AFRL L+L+  D    + +TY A+
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNAL 293

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  CK+ + ++A  L + ++ +G+ PN  T+ SLI G CK G  + A+  ++ M   GC
Sbjct: 294 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC 353

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+ Y Y++ I+ LCK    QE    + +  Q++++   + YTI++ + LK+        
Sbjct: 354 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 413

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV +G NPD+  YTT + A+C + ++ E+E    E    G+      Y +++ G+ 
Sbjct: 414 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G    AV   ++M  +   P+  TY  L+  L +   +++      + + K I   E+
Sbjct: 474 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI---EL 530

Query: 579 TRVTLAYEYCKQGD----SATAMIILESLDK 605
           T V   ++  K+ +    S T   ILE   +
Sbjct: 531 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 561



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 213/454 (46%), Gaps = 31/454 (6%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G      T N ++   C    V+ A ++FD+M  RG   D  SY  ++  +C  GR
Sbjct: 37  MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96

Query: 239 VTEADRWLSAMLDRGAILDNATLT-------------LLITAFCDKGFRGSI-------- 277
           + EA      M D+  +   A L              L++    + G+R S         
Sbjct: 97  IDEAVELFGEM-DQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVD 155

Query: 278 --------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                   K+A E+L+EM  KG  P V T T +I+  CK+G    A R+ L+L++    K
Sbjct: 156 FRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV-LELMKLRGCK 214

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV TY A++ G+C E K+++A  LL +M+  G+ P+  TY  LI G C  G+ E A+ L
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           + LM  +G   + Y YNA+I+ LCK GR  +A  L      R ++ + +T+  L++   K
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   A     +MV AG  PD + Y++ I   C+ K  +E   F  E +   + P+   
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT +I   L++ N     + +  M   GC PD +TY   +   C + +L+EA      M 
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             G++   +   TL   +   G +  A+ IL+ +
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 488



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 181/405 (44%), Gaps = 43/405 (10%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  +I  LC++     A R    +VRS  ++P+ +T+ ++I GYC+  +++ A  L ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRS-GWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 71

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G   +  +Y +LI G C+ G  + A +L   M +    P+++ Y A++ GLCK GR
Sbjct: 72  MPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGR 127

Query: 418 -----------------------------------VQEAYELLKKAFQRELQADKITYTI 442
                                               +EA E+L++ F++ L    +T T 
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++ + K+     AL +   M   G  P++  Y  L+  FC + K+ ++     +    G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY  +I G   DG+I SA +  + M   G   D  TY ALI+ LCK  + D+AC
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
             ++S+  +GI P  VT  +L    CK G    A   LE +          T ++ I  L
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFS 664
           C  K       F  ++L KD     V+   + +   +   Y L +
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 412



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 205/522 (39%), Gaps = 93/522 (17%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           + KE   M+ EM   GL     T   V+   C+ G +  A  V + M  RG   +  +Y 
Sbjct: 162 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 221

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V  +C  G+V +A   L+ M   G   D  T  LLI   C     G I+ AF LL  M
Sbjct: 222 ALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQC---IDGHIESAFRLLRLM 278

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G   + YT+  LI+ LCK G T++A  LF  L  +   KPN  T+ ++I+G CK  K
Sbjct: 279 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGK 337

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK----------VGNF-------------- 383
           ++ A   LE+M   G  P+T TY+S I   CK          +G                
Sbjct: 338 VDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 397

Query: 384 -------ERAYDLM----DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
                  ER Y L+      M   GC P++  Y   +   C +GR+ EA  +L +  +  
Sbjct: 398 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES- 491
           +  D + Y  L+  H    +T  A+ +  +M      P+   Y  L+    R + +++  
Sbjct: 458 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVL 517

Query: 492 -------EKFFQEAITAGLF---------PTKETYTSMICGYLRDGNISSAVKYFQRMN- 534
                   K  +     GLF         P   TY+S++ G+  DG    A      M  
Sbjct: 518 PLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 577

Query: 535 ----------------------------------QIGCAPDNITYGALISGLCKQSKLDE 560
                                             Q G  P  ++Y  L+SGL  + + D+
Sbjct: 578 DSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDK 637

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIIL 600
           A + + +   K  SP E+    +     K+G  D +  MII+
Sbjct: 638 AKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 679



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 182/410 (44%), Gaps = 21/410 (5%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++  F ++  M  +GL     T N ++   C+ G  + A  +FD +  RG+  +A ++
Sbjct: 266 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 325

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+V  A ++L  M+  G   D  T +  I   C    +GS ++    + E
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK--MKGS-QEGLSFIGE 382

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M++K  KP+   +T++I  L K+       R + ++V S    P+V TYT  +  YC E 
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV-SSGCNPDVVTYTTSMRAYCIEG 441

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++N AE +L  M + G+  +T  Y +L+ GH  +G  + A  ++  M      PN + Y 
Sbjct: 442 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 501

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKI-----------------TYTILLSEHLK 449
            ++  L +   V++   L      + ++   +                 TY+ +L    +
Sbjct: 502 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 561

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              T++A  L   M +  ++ +   YT L+  FC+ K+  ++       I  G  P   +
Sbjct: 562 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMS 621

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           Y  ++ G + +G    A + F        +PD I +  +I GL K+   D
Sbjct: 622 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSD 671



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 23/327 (7%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA--EEVFDEMCARGVCADASSYK 227
           +EG S + EM    +    ST+N  + I   L    Y      + EM + G   D  +Y 
Sbjct: 374 QEGLSFIGEMLQKDVK--PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             + AYC  GR+ EA+  L  M   G  +D      L+      G       A  +L++M
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG---QTDHAVSILKQM 488

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL----------------FLKLVRSDNYKPN 331
                 PN +T+ +L+  L +    E    L                   +++ + + PN
Sbjct: 489 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 548

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY++++ G+ ++ +   A  L+  MKE  +  N + YT+L+   CK   +  A+ L+ 
Sbjct: 549 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 608

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P++ +Y  ++ GL  +G+  +A E+   +  ++   D+I + +++   +K+ 
Sbjct: 609 SMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 668

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +  +  +   + +    P    Y  L
Sbjct: 669 HSDISREMIIMLERMNCRPSHQTYAML 695


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 13/427 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G    A  V       G   D  +Y  +V  YCR G +  A R + +M       D 
Sbjct: 87  CRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDA 143

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T LI   CD   RG +  A  LL++M+R+G +PNV T+TVL++ +C+    E+A  +
Sbjct: 144 YTYTPLIRVLCD---RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L  +R+    PN+ TY  +I+G C+E +++ A  LL R+   G  P+T +YT+L+ G C
Sbjct: 201 -LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               ++   +L   M ++ C PN   ++ +I   C+ G V+ A ++L++  +     +  
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
              I+++   KQ     A  L   M   G NPD  +YTT++   CR ++  ++++   E 
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +     P + T+ + IC   + G I  A+   ++M++ GC    +TY AL++G C Q  +
Sbjct: 380 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHI 439

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCK-QGDSATAMIILESL--DKKLWIRTVNTL 615
           D A + + SM  K   P  +T  TL    C  +     A ++ E L  D    + T N L
Sbjct: 440 DSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVL 496

Query: 616 IRKLCSE 622
           +   C +
Sbjct: 497 VSFFCQK 503



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 238/520 (45%), Gaps = 46/520 (8%)

Query: 152 AHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           A +V  C  ++ +    GR  +   ++     +G P+     N +V   C  G ++ A  
Sbjct: 73  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +   M    V  DA +Y  ++   C  GRV +A   L  ML RG   +  T T+L+ A C
Sbjct: 133 LIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 270 -DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            + GF    +QA  +L+EM  KG  PN+ T+ V+I+G+C++G  + A R  L  + S  +
Sbjct: 190 RNSGF----EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA-RELLNRLPSYGF 244

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+  +YT ++ G C  ++ +  E L   M E+  +PN  T+  LI   C+ G  ERA  
Sbjct: 245 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 304

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +++ M + GC  N    N +I+ +CK+GRV +A++LL          D I+YT +L    
Sbjct: 305 VLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLC 364

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +      A  L   MV+    P+   + T I   C++  ++++    ++    G      
Sbjct: 365 RAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVV 424

Query: 509 TYTSMICGYLRDGNISSAVKYFQRM----NQI---------------------------- 536
           TY +++ G+   G+I SA++ F+ M    N I                            
Sbjct: 425 TYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            C P+ +T+  L+S  C++  L+EA +  E M+  G +P  +T  TL     K   S  A
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
           + +L  L  K     + T +++I  L  E R+  A   FH
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 233/518 (44%), Gaps = 63/518 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+ +  S++ +M   G      T   ++   C     E A  V DEM A+G
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-----------------------------DRW---- 245
              +  +Y +++   CR GRV +A                              RW    
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVE 268

Query: 246 --LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
              + M+++  + +  T  +LI  FC  G    +++A ++LE+M   G   N     ++I
Sbjct: 269 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGM---VERAIQVLEQMTEHGCATNTTLCNIVI 325

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           + +CK+G  + AF+L L  + S    P+  +YT ++ G C+ E+ + A+ LL  M     
Sbjct: 326 NSICKQGRVDDAFKL-LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNC 384

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN  T+ + I   C+ G  E+A  L++ M + GCT  +  YNA+++G C +G +  A E
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE 444

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L +       + + ITYT LL+          A  L   M++    P++  +  L++ FC
Sbjct: 445 LFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           ++  ++E+ +  ++ +  G  P   TY +++ G  +D +   A++    +   G +PD I
Sbjct: 502 QKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVI 561

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISP---------------CEVTRVTLAYEY- 587
           T+ ++I  L K+ +++EA Q +  +   G+ P               CE+      + Y 
Sbjct: 562 TFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYM 621

Query: 588 ----CKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
               C   +S T +I++E L  +  ++    L+  LCS
Sbjct: 622 VSNGCMPNES-TYIILIEGLAHEGLLKEAQDLLSVLCS 658



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 190/384 (49%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G+VE A +V ++M   G   + +   +++ + C+ GRV +A + L+ M
Sbjct: 285 TFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C +  R     A ELL EMVR    PN  T    I  LC+K
Sbjct: 345 GSYGCNPDTISYTTVLKGLC-RAERWD--DAKELLNEMVRNNCPPNEVTFNTFICILCQK 401

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A  + ++ +        V TY A+++G+C +  ++ A   LE  +     PNT T
Sbjct: 402 GLIEQAI-MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTIT 457

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M +  C PN+  +N ++   C+KG ++EA EL+++  
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + ITY  LL    K   ++ AL L   +V  G++PD+  ++++I    ++ +++
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIE 577

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ + F      G+ P    Y  ++ G  +   I +A+ +F  M   GC P+  TY  LI
Sbjct: 578 EAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L EA      +  +G+
Sbjct: 638 EGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 7/386 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G ++    ++ +MT +G    T+  N V+   C+ G V+ A ++ ++M + G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++   CR  R  +A   L+ M+      +  T    I   C KG    I+
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL---IE 405

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  L+E+M   G    V T+  L++G C +G  + A  LF    RS   KPN  TYT +
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF----RSMPCKPNTITYTTL 461

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C  E+++ A  L+  M      PN  T+  L+   C+ G  E A +L++ M + GC
Sbjct: 462 LTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGC 521

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  YN ++DG+ K    ++A ELL     + +  D IT++ ++    K+   ++A+ 
Sbjct: 522 TPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQ 581

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +   G+ P    Y  ++   C++ ++  +  FF   ++ G  P + TY  +I G  
Sbjct: 582 LFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLA 641

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNIT 544
            +G +  A      +   G    N+T
Sbjct: 642 HEGLLKEAQDLLSVLCSRGVLNKNLT 667



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 171/392 (43%), Gaps = 34/392 (8%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLF------------------------------ 319
            G  P+VY  T LI  LC++G T  A R+                               
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 320 -LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             +L+ S    P+ +TYT +I   C   ++  A  LL+ M  +G  PN  TYT L+   C
Sbjct: 130 ARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +   FE+A  ++D M  +GCTPNI  YN II+G+C++GRV +A ELL +      Q D +
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +YT LL              LF  M++    P+   +  LI  FCR   ++ + +  ++ 
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G          +I    + G +  A K    M   GC PD I+Y  ++ GLC+  + 
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTL 615
           D+A +    M+     P EVT  T     C++G    A++++E + +    + + T N L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           +   C +  +  A   F  +  K   +   +L
Sbjct: 430 VNGFCVQGHIDSALELFRSMPCKPNTITYTTL 461



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 4/155 (2%)

Query: 522 NISSAVKYFQRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV-T 579
           +++ AV+  +R     G APD      LI  LC++ +  +A +   +  G G SP +V  
Sbjct: 55  DLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG-SPVDVFA 113

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
             TL   YC+ G    A  ++ S+       T   LIR LC   RV  A      +L + 
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 173

Query: 640 QNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
              + V+   L  A C  S      + L +  A+G
Sbjct: 174 CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 196/364 (53%), Gaps = 4/364 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +  + GV  +  +  +++  +C +  +T A    + +L RG   D  TL  LI   C
Sbjct: 115 LFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLC 174

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              F G IK+A    +++V +G++ +  ++  LI+GLCK G T+   RL  KL    + K
Sbjct: 175 ---FCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVK 230

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  YT +I   CK +++  A  L   M  +G+ PN  TY +LIYG C +GN + A+ L
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSL 290

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M  +   P++Y +N +ID L K+G++ EA  L ++   + +  + +TYT L+    K
Sbjct: 291 LNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCK 350

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               ++A+ L  +M + G+ PD+++YT L+ A C+  +++ +++FFQ  +  G      T
Sbjct: 351 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT 410

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  MI G  + G     +    +M   GC PD IT+  +I  L ++ + D+A +F   MI
Sbjct: 411 YNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMI 470

Query: 570 GKGI 573
            +G+
Sbjct: 471 ARGL 474



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 165/349 (47%), Gaps = 4/349 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +  +   FS+   +   G      TLN ++   C  G ++ A    D++ 
Sbjct: 131 LNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVV 190

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY  ++   C+ G      R L  +       D    T +I   C     G
Sbjct: 191 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A +L  EM+ KG  PNV+T+  LI G C  G  ++AF L L  ++  N  P+V+T+
Sbjct: 251 D---ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSL-LNEMKLKNINPDVYTF 306

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I    KE K++ A  L E MK + + PN  TYTSLI G CK  + ERA  L   M +
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P++Y+Y  ++D LCK GR++ A +  +    +    +  TY ++++   K      
Sbjct: 367 QGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 426

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
            + L  +M   G  PD   + T+I A   + +  ++EKF +E I  GL 
Sbjct: 427 VMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 176/429 (41%), Gaps = 9/429 (2%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR  ++  +  WLS       I   AT TL   +            A      M+     
Sbjct: 36  CRCEKIVNS--WLSLFPPYPPI---ATATLHSQSHSQPHSHHHHHHAVASFNRMLLMRPP 90

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P  +    ++  L K         LF K  +S+   PN+ T   +I+ +C    +  A  
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLF-KQFQSNGVTPNLCTLNILINCFCHLAHITFAFS 149

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +   + ++G  P+  T  +LI G C  G  +RA    D +  +G   +  +Y  +I+GLC
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G  +    LL+K     ++ D + YT ++    K      A  L+  M+  G++P++ 
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y TLI  FC    +KE+     E     + P   T+  +I    ++G I  A+  F+ M
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 P+ +TY +LI GLCK   L+ A    + M  +GI P   +   L    CK G  
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 389

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A    + L  K   L +RT N +I  LC     G       K+ GK    D ++   +
Sbjct: 390 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTI 449

Query: 651 KNACYESNK 659
             A +E ++
Sbjct: 450 ICALFEKDE 458



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 4/349 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    +  ++S   K +       L ++ +  G+ PN  T   LI   C + +   A+ +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              + K G  P+    N +I GLC  G ++ A     K   +  Q D+++Y  L++   K
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             ETK    L  ++    + PD+  YTT+I   C+ K++ ++   + E I  G+ P   T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y ++I G+   GN+  A      M      PD  T+  LI  L K+ K+DEA   +E M 
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
            K + P  VT  +L    CK      A+ + + + ++     + +   L+  LC   R+ 
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            A  FF  LL K  +++  +   + N   ++  +    DL  ++ EG G
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM-EGKG 438


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 12/468 (2%)

Query: 150 ERA----HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           ERA    H     M+    + G L+ GF +  +M  +GL     T N ++   C  G + 
Sbjct: 91  ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 150

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + DEM ++ +  D  +Y ++     R G            L  G  + + T ++L+
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 210

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G    +  A E+L+ +V  G  P    +  LI+G C+ G  E AF  F ++ +S
Sbjct: 211 NGLCKDG---KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KS 266

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            + KP+  TY A+I+G CK E++  A+ LL  M++ G+ P   T+ +LI  + + G  E+
Sbjct: 267 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            + ++  M + G  PN+ +Y +I++  CK G++ EA  +L   F +++  +   Y  ++ 
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +++     QA  L  +M   G++P I  Y  LI   C Q ++ E+E+         L P
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              +Y ++I      GNI  A+   QRM++ G      TY  LISGL    +L+E    Y
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 506

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           + M+   + P       +   Y K G+   A    E L K++  +  N
Sbjct: 507 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA----EDLRKEMLQKRNN 550



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 8/474 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G L E   M+  M  +G P   + + N V+      G    A EVFDEM  R V  +  +
Sbjct: 41  GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 100

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+  + + G +    R    M+  G   +  T  +L++  C  G  G   +   LL+
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG---ETSALLD 157

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EM  +   P+ +T+++L DGL + G ++    LF K ++ +      +T + +++G CK+
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK-NGVTIGDYTCSILLNGLCKD 216

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K++ AE +L+ +   GL+P    Y +LI G+C+ G  E A+     M      P+   Y
Sbjct: 217 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITY 276

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           NA+I+GLCK  R+  A +LL +     +     T+  L+  + +  + ++   +   M +
Sbjct: 277 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 336

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL P++ +Y +++ AFC+  K+ E+     +     + P  + Y ++I  Y+  G    
Sbjct: 337 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 396

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A    ++M   G +P  +TY  LI GLC QS++ EA +   S+    + P  V+  TL  
Sbjct: 397 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 456

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             C +G+   A+ + + + K   K  +RT + LI  L    R+      + K++
Sbjct: 457 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 206/463 (44%), Gaps = 6/463 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F  + + G   D  ++   V A    G + EA   L  M   GA   NA    ++ A   
Sbjct: 15  FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           +  RG    A E+ +EM  +   PN  T+  +IDG  K G  E  FRL  ++V     KP
Sbjct: 75  RAGRGG--DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV-CHGLKP 131

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  TY  ++SG C+  +M     LL+ M  Q ++P+  TY+ L  G  + G+ +    L 
Sbjct: 132 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 191

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
               K G T   Y  + +++GLCK G+V  A E+L+      L   ++ Y  L++ + + 
Sbjct: 192 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 251

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E + A   F +M    + PD   Y  LI   C+ +++  ++    E    G+ PT ET+
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I  Y R G +         M + G  P+ ++YG++++  CK  K+ EA    + M  
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGM 627
           K + P       +   Y + G +  A I++E +        I T N LI+ LC++ ++  
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 431

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           A    + L       D VS   L +AC          DL QR+
Sbjct: 432 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 474



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 6/376 (1%)

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A    G    +++AF +L      G +P+ +     +      G   +A  +  ++ R  
Sbjct: 1   ALLSLGRHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDG 57

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PN  +Y  +I+G  +  +   A  + + M E+ +LPN  TY ++I GH K G+ E  
Sbjct: 58  APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + L D M   G  PN   YN ++ GLC+ GR+ E   LL +   +++  D  TY+IL   
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +  ++K  L LF + +K G+    +  + L+   C+  K+  +E+  Q  + AGL PT
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 237

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           +  Y ++I GY + G +  A   F +M      PD+ITY ALI+GLCK  ++  A     
Sbjct: 238 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 297

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            M   G++P   T  TL   Y + G      I+L  + +   K  + +  +++   C   
Sbjct: 298 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357

Query: 624 RVGMAALFFHKLLGKD 639
           ++  A      +  KD
Sbjct: 358 KIPEAVAILDDMFHKD 373



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 19/349 (5%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNN 182
           +    L  +G    A EV+Q +V++               + + G L+  FS   +M + 
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
            +     T N ++   C+   +  A+++  EM   GV     ++  ++ AY R G++ + 
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 327

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
              LS M + G   +  +   ++ AFC  G    I +A  +L++M  K   PN   +  +
Sbjct: 328 FIVLSEMQENGLKPNVVSYGSIVNAFCKNG---KIPEAVAILDDMFHKDVLPNAQVYNAI 384

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ID   + G  ++AF L  K+ +S+   P++ TY  +I G C + +++ AE ++  +    
Sbjct: 385 IDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+P+  +Y +LI   C  GN ++A DL   M K G    +  Y+ +I GL   GR+ E  
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            L +K  Q  +      + I++  + K     +A  L   M++   N D
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 4/382 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +    G+  D  +  +++  +C    +T A    + +L RG   +  TL  LI   C
Sbjct: 79  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLC 138

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              FRG IK+A    +++V +G++ +  ++  LI+GLCK G T+   RL  KL    + K
Sbjct: 139 ---FRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL-EGHSVK 194

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I+  CK + +  A  +   M  +G+ P+  TYT+LI+G C +G+ + A+ L
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSL 254

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M  +   PN+  +N +ID L K+G+++EA  LL    +  ++ D  TY  L+  +  
Sbjct: 255 LNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFL 314

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E K A  +F  M + G+ PD+  YT +I   C+ K + E+   F+E     + P   T
Sbjct: 315 VDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVT 374

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y S+I G  ++ ++  A+   +RM + G  PD  +Y  L+ GLCK  +L++A + ++ ++
Sbjct: 375 YNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLL 434

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            KG          L    CK G
Sbjct: 435 AKGYHLNVHAYTVLINRLCKAG 456



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 4/418 (0%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F     +   FS+   +   G      TLN ++   C  G ++ A    D++ 
Sbjct: 95  LSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLV 154

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY  ++   C+ G      R L  +       D      +I + C     G
Sbjct: 155 AQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 214

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A ++  EM+ KG  P+V T+T LI G C  G  ++AF L L  ++  N  PNV T+
Sbjct: 215 D---ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSL-LNEMKLKNINPNVCTF 270

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I    KE KM  A++LL  M +  + P+  TY SLI G+  V   + A  +   M +
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G TP++  Y  +I+GLCK   V EA  L ++   + +  D +TY  L+    K    ++
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ L  RM + G+ PD+++YT L+   C+  +++++++ FQ  +  G       YT +I 
Sbjct: 391 AIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
              + G    A+    +M   GC PD +T+  +I  L ++ + D+A +    MI +G+
Sbjct: 451 RLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 39/397 (9%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P  +    ++  L           LF K    +   P++ T + +I+ +C +  +  A  
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLF-KQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +   + ++G  PN  T  +LI G C  G  ++A    D +  +G   +  +Y  +I+GLC
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G  +    LL+K     ++ D + Y  +++   K      A  ++  M+  G++PD+ 
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 474 AYTTLIAAFC-----------------------------------RQKKMKESEKFFQEA 498
            YTTLI  FC                                   ++ KMKE++      
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + A + P   TY S+I GY     +  A   F  M Q G  PD   Y  +I+GLCK   +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA   +E M  K + P  VT  +L    CK      A+ + + + ++     + +   L
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
           +  LC   R+  A   F +LL K  +++  +   L N
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 6/250 (2%)

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           +++LM LM      P  + +N I+  L           L K+     +  D  T +IL++
Sbjct: 44  SFNLMLLMRPP---PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
               QA    A  +F  ++K G +P+     TLI   C + ++K++  F  + +  G   
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
            + +Y ++I G  + G   +  +  +++      PD + Y  +I+ LCK   L +AC  Y
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
             MI KGISP  VT  TL + +C  G    A  +L  +  K     + T N LI  L  E
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 623 KRVGMAALFF 632
            ++  A +  
Sbjct: 281 GKMKEAKILL 290



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 39/241 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ + ++ G++KE   ++  M    +     T N ++     +  V++A+ VF  M  RG
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y  M+   C+   V EA      M  +  I D  T   LI   C       ++
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCK---NHHLE 389

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L + M  +G +P+VY++T+L+DGLCK G  E A  +F +L+ +  Y  NVH YT +
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLL-AKGYHLNVHAYTVL 448

Query: 339 ISGYCK-----------------------------------EEKMNRAEMLLERMKEQGL 363
           I+  CK                                   +++ ++AE +L  M  +GL
Sbjct: 449 INRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508

Query: 364 L 364
           L
Sbjct: 509 L 509


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 211/451 (46%), Gaps = 41/451 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F ++G +   FS++ ++   G    T TLN  +   C  G +  A    D++ A G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
              D  SY  ++   C++G    A   L  +  +   LD    + +I + C DK    ++
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK----NV 226

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             AF+L  EMV +    N+ T++ LI G C  G  + A  LF K+  S+N  P+V+T+  
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT-SENINPDVYTFNI 285

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++  +CKE ++  A+  L  M +QG+ P+  TY SL+ G+C V     A  +++ M   G
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 398 CT-----------------------------------PNIYAYNAIIDGLCKKGRVQEAY 422
            T                                   PN+  YN++IDGLCK GR+  A 
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           EL+     R  Q D ITY+ +L    K     +A+ L  ++   G+ P+++ YT LI   
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+  +++++   F++ +  G   T  TYT MI G+   G    A+    +M    C PD 
Sbjct: 466 CKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           ITY  +I  L  + + D+A +    MI +G+
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 205/416 (49%), Gaps = 7/416 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +M  RG+  +  ++ +++  +C++G +  A   L+ +L  G   D  TL   I  FC
Sbjct: 92  LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
               +G I QA    +++V  G+  +  ++  LI+GLCK G T  A  L L+ V     +
Sbjct: 152 ---LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALEL-LRRVDGKLVQ 207

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +V  Y+ +I   CK++ +N A  L   M  + +  N  TY++LI G C VG  + A  L
Sbjct: 208 LDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGL 267

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M  E   P++Y +N ++D  CK+GRV+EA   L    ++ ++ D +TY  L+  +  
Sbjct: 268 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 327

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E   A  +   M   G+   + +Y  +I  FC+ K + ++ K F+E     +FP   T
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVIT 387

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y S+I G  + G IS A++    M+  G  PD ITY +++  LCK   +D+A      + 
Sbjct: 388 YNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLK 447

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSE 622
            +GI P   T   L    CK G    A  I E L  K +  TVNT   +I+  CS 
Sbjct: 448 DQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  +   + + F +  EM +  +     T + ++   C +G ++ A  +F++M +  
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  ++ ++V A+C+ GRV EA   L+ M+ +G   D  T   L+  +C       + 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC---LVNEVN 332

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L  M  +G    V ++ ++I+G CK    ++A +LF K +      PNV TY ++
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF-KEMHHKQIFPNVITYNSL 391

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  +++ A  L++ M ++G  P+  TY+S++   CK    ++A  L+  +  +G 
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+Y Y  +IDGLCK GR+++A  + +    +       TYT+++          +AL 
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
           L  +M      PD   Y  +I +   + +  ++EK  +E IT GL  +   Y S
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 181/432 (41%), Gaps = 49/432 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F  +G+LK+   +  +MT+  +     T N +V   C+ G V+ A+     M  +G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++  YC +  V  A   L+ M  RG      +  ++I  FC       + 
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM---VD 367

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L +EM  K   PNV T+  LIDGLCK G    A  L + L+     +P++ TY+++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL-IDLMHDRGQQPDIITYSSI 426

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK   +++A  LL ++K+QG+ PN  TYT LI G CK G  E A ++ + +  +G 
Sbjct: 427 LDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              +  Y  +I G C  G   EA  LL K        D ITY I++     + E  +A  
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546

Query: 459 LFCRMVKAG----------------------LNPD--------------------IHAYT 476
           L   M+  G                      LN D                    I+   
Sbjct: 547 LLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDC 606

Query: 477 TLIAAFCRQKKMKESEKFFQEAIT---AGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            L  +  R K ++               G      TYT MI G+   G    ++    +M
Sbjct: 607 VLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKM 666

Query: 534 NQIGCAPDNITY 545
              GC PD +TY
Sbjct: 667 EVNGCIPDAVTY 678



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 174/374 (46%), Gaps = 33/374 (8%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L ++M  +G KPN     +LI+  C+ G    AF +  K+++   Y+P+  T    I
Sbjct: 89  VLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKM-GYEPDTITLNTFI 147

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C + ++++A    +++   G   +  +Y +LI G CKVG    A +L+  +  +   
Sbjct: 148 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQ 207

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            ++  Y+ IID +CK   V +A++L  +   R + ++ +TY+ L+S      + K A+GL
Sbjct: 208 LDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGL 267

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M    +NPD++ +  L+ AFC++ ++KE++      +  G+ P   TY S++ GY  
Sbjct: 268 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 327

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              ++ A      M+  G      +Y  +I+G CK   +D+A + ++ M  K I P  +T
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVIT 387

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
                                            N+LI  LC   R+  A      +  + 
Sbjct: 388 Y--------------------------------NSLIDGLCKSGRISYALELIDLMHDRG 415

Query: 640 QNVDRVSLAALKNA 653
           Q  D ++ +++ +A
Sbjct: 416 QQPDIITYSSILDA 429



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 150/324 (46%), Gaps = 4/324 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  LF  L+R +   P++  +  ++    K +  +    L ++M+ +G+ PN   +  LI
Sbjct: 54  AVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              C++G    A+ ++  + K G  P+    N  I G C KG++ +A     K       
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D+++Y  L++   K  ET+ AL L  R+    +  D+  Y+T+I + C+ K + ++   
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           + E ++  +     TY+++I G+   G +  A+  F +M      PD  T+  L+   CK
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRT 611
           + ++ EA      M+ +GI P  VT  +L   YC   +   A  IL ++  +     +R+
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            N +I   C  K V  A   F ++
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEM 376



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 47/292 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+     ++  M + G      T + ++   C+  LV+ A  +  ++  +G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++   C+ GR+ +A      +L +G  L   T T++I  FC  G      
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL---FD 507

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD------NYKPNV 332
           +A  LL +M      P+  T+ ++I  L  K   +KA +L  +++          Y    
Sbjct: 508 EALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWS 567

Query: 333 HTYTAMISGYCKEEKM---------NRAEMLLERM------------------------- 358
            ++ A  + +   + +         N A++LLER+                         
Sbjct: 568 LSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYS 627

Query: 359 ----KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
                +QG + + NTYT +I G C  G F+ +  L+  M   GC P+   Y+
Sbjct: 628 TCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 3/138 (2%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            + ++  AV  F  + +    P ++ +G ++  L K          ++ M  +GI P  V
Sbjct: 47  NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFV 106

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
               L   +C+ G    A  +L  + K  +     T+NT I+  C + ++  A  F  KL
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166

Query: 636 LGKDQNVDRVSLAALKNA 653
           +    ++D+VS   L N 
Sbjct: 167 VALGFHLDQVSYGTLING 184


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 12/468 (2%)

Query: 150 ERA----HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           ERA    H     M+    + G L+ GF +  +M  +GL     T N ++   C  G + 
Sbjct: 43  ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 102

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + DEM ++ +  D  +Y ++     R G            L  G  + + T ++L+
Sbjct: 103 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 162

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G    +  A E+L+ +V  G  P    +  LI+G C+ G  E AF  F ++ +S
Sbjct: 163 NGLCKDG---KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KS 218

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            + KP+  TY A+I+G CK E++  A+ LL  M++ G+ P   T+ +LI  + + G  E+
Sbjct: 219 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 278

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            + ++  M + G  PN+ +Y +I++  CK G++ EA  +L   F +++  +   Y  ++ 
Sbjct: 279 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 338

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +++     QA  L  +M   G++P I  Y  LI   C Q ++ E+E+         L P
Sbjct: 339 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 398

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              +Y ++I      GNI  A+   QRM++ G      TY  LISGL    +L+E    Y
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           + M+   + P       +   Y K G+   A    E L K++  +  N
Sbjct: 459 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA----EDLRKEMLQKRNN 502



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 222/466 (47%), Gaps = 8/466 (1%)

Query: 175 MVIEMTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           M+  M  +G P   + + N V+      G    A EVFDEM  R V  +  +Y  M+  +
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
            + G +    R    M+  G   +  T  +L++  C  G  G   +   LL+EM  +   
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG---ETSALLDEMASQKMV 117

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+ +T+++L DGL + G ++    LF K ++ +      +T + +++G CK+ K++ AE 
Sbjct: 118 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLK-NGVTIGDYTCSILLNGLCKDGKVSIAEE 176

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L+ +   GL+P    Y +LI G+C+ G  E A+     M      P+   YNA+I+GLC
Sbjct: 177 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 236

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K  R+  A +LL +     +     T+  L+  + +  + ++   +   M + GL P++ 
Sbjct: 237 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 296

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           +Y +++ AFC+  K+ E+     +     + P  + Y ++I  Y+  G    A    ++M
Sbjct: 297 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G +P  +TY  LI GLC QS++ EA +   S+    + P  V+  TL    C +G+ 
Sbjct: 357 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 416

Query: 594 ATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             A+ + + + K   K  +RT + LI  L    R+      + K++
Sbjct: 417 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 193/428 (45%), Gaps = 6/428 (1%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L  M   GA   NA    ++ A   +  RG    A E+ +EM  +   PN  T+  +IDG
Sbjct: 2   LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGG--DAVEVFDEMTERAVLPNHITYNTMIDG 59

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             K G  E  FRL  ++V     KPN  TY  ++SG C+  +M     LL+ M  Q ++P
Sbjct: 60  HIKGGDLEAGFRLRDQMV-CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 118

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY+ L  G  + G+ +    L     K G T   Y  + +++GLCK G+V  A E+L
Sbjct: 119 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +      L   ++ Y  L++ + +  E + A   F +M    + PD   Y  LI   C+ 
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           +++  ++    E    G+ PT ET+ ++I  Y R G +         M + G  P+ ++Y
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           G++++  CK  K+ EA    + M  K + P       +   Y + G +  A I++E +  
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358

Query: 606 K---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYAL 662
                 I T N LI+ LC++ ++  A    + L       D VS   L +AC        
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 418

Query: 663 FSDLSQRI 670
             DL QR+
Sbjct: 419 ALDLQQRM 426



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 19/349 (5%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNN 182
           +    L  +G    A EV+Q +V++               + + G L+  FS   +M + 
Sbjct: 160 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
            +     T N ++   C+   +  A+++  EM   GV     ++  ++ AY R G++ + 
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
              LS M + G   +  +   ++ AFC  G    I +A  +L++M  K   PN   +  +
Sbjct: 280 FIVLSEMQENGLKPNVVSYGSIVNAFCKNG---KIPEAVAILDDMFHKDVLPNAQVYNAI 336

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           ID   + G  ++AF L  K+ +S+   P++ TY  +I G C + +++ AE ++  +    
Sbjct: 337 IDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+P+  +Y +LI   C  GN ++A DL   M K G    +  Y+ +I GL   GR+ E  
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            L +K  Q  +      + I++  + K     +A  L   M++   N D
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 250/596 (41%), Gaps = 90/596 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  + ++G ++  F++   M   G+ +     N +V   C  G V+ A ++ D M   G
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y + +V YCR   V +A      M+ +G + D  TL+ L+   C  G      
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG---RFS 296

Query: 279 QAFELLEEMVRKGWKPNVYTH-----------------------------------TVLI 303
           +A+ L  EM + G  PN  T+                                   T L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           D LCK+G  ++A  +F +   SDN+ PN  TYT +I   CK   ++ AE +L  M+E+ +
Sbjct: 357 DWLCKEGKIDEAKDMF-RHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------ 411
            PN  T++S+I G  K G   +A D M  M + G  PN+  Y  +IDG            
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALD 475

Query: 412 -----LC------------------KKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
                LC                  K G++++A  L ++  +R +  D + YT L+    
Sbjct: 476 VYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLF 535

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K      A  +   + +  L PD   Y   I   C   K KE+E F +E  + GL P + 
Sbjct: 536 KTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQV 595

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY +MI    R+G  + A+K    M +    P+ ITY  LI GL +   +++A      M
Sbjct: 596 TYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM 655

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---------IRTVNTLIRKL 619
              G SP  +T   +  + C QG  +   +ILE  +   W         I   NTL+R L
Sbjct: 656 SSSGFSPTSLTHRRV-LQACSQGRRSD--LILEIHE---WMMNAGLCADITVYNTLVRVL 709

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQRIAEGI 674
           C       A +   ++ G+    D ++  AL    ++S      FS   Q +  GI
Sbjct: 710 CYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 218/465 (46%), Gaps = 40/465 (8%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C++G +E A  V + M A+GV  D   Y  +V   CR G V  A   +  M  
Sbjct: 178 NSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKR 237

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T T+ I  +C    R ++  AF L EEMVRKG  P+V T + L+ GLCK G 
Sbjct: 238 DGVEPNVVTYTMFIVEYCR---RNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGR 294

Query: 312 TEKAFRLFLKL----------------------------------VRSDNYKPNVHTYTA 337
             +A+ LF ++                                  V S     ++  YTA
Sbjct: 295 FSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTA 354

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CKE K++ A+ +          PN  TYT LI   CK GN + A  ++  M ++ 
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +PN+  +++II+GL K+G V +A + +++  +R +  + +TY  ++    K    + AL
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            ++  M+  G+  +     +L+    +  K++++E  F+E    G+      YT++I G 
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + GN+ +A K  Q + +    PD + Y   I+ LC   K  EA  F E M   G+ P +
Sbjct: 535 FKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQ 594

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
           VT  T+     ++G +A A+ +L  + +   K  + T +TLI  L
Sbjct: 595 VTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGL 639



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 177/368 (48%), Gaps = 6/368 (1%)

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI--LDNATLTLLI 265
           E +  EMC RGV  DA +   ++V  CR GRV  A      M+  G I  LD      L+
Sbjct: 122 EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLV 181

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
             +C     G ++ AF + E M  +G   +V  +  L+ GLC+ G  + A R  +  ++ 
Sbjct: 182 DGYCKV---GDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAA-RDMVDTMKR 237

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D  +PNV TYT  I  YC+   ++ A  L E M  +G+LP+  T ++L+ G CK G F  
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           AY L   M K G  PN   Y  +ID L K  R  E+  LL +   R +  D I YT L+ 
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K+ +  +A  +F   +     P+   YT LI A C+   +  +E+   E     + P
Sbjct: 358 WLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISP 417

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              T++S+I G ++ G +  A  Y + M + G  P+ +TYG +I G  K    + A   Y
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVY 477

Query: 566 ESMIGKGI 573
             M+ +G+
Sbjct: 478 HEMLCEGV 485



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 218/456 (47%), Gaps = 10/456 (2%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  SY +++  +   G +   +  L+ M  RG   D  T+  ++   C  G    + +A 
Sbjct: 102 DTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGVPFDAVTVNTVLVGLCRDG---RVDRAA 157

Query: 282 ELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            L E MVR G     +V     L+DG CK G  E AF +  ++ ++     +V  Y +++
Sbjct: 158 ALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERM-KAQGVGVDVVGYNSLV 216

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C+  +++ A  +++ MK  G+ PN  TYT  I  +C+    + A+ L + M ++G  
Sbjct: 217 AGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL 276

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++   +A++ GLCK GR  EAY L ++  +     + +TY +L+    K     ++L L
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +V  G+  D+  YT L+   C++ K+ E++  F+ A++    P   TYT +I    +
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            GN+  A +    M +   +P+ +T+ ++I+GL K+  + +A  +   M  +GI P  VT
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 580 RVTLAYEYCK-QGDSATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKLL 636
             T+     K  G  A   +  E L + + +    V++L+  L    ++  A   F ++ 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 637 GKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            +   +D V+   L +  +++        + Q + E
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 205/449 (45%), Gaps = 39/449 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G++++  ++  EM   G+ L       ++    + G +  A +V  E+
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             + +  DA  Y + +   C +G+  EA+ +L  M   G   D  T   +I A   +   
Sbjct: 551 TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA---QSRE 607

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
           G   +A +LL  M R   KPN+ T++ LI GL + G  EKA +  L  + S  + P    
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA-KYLLNEMSSSGFSPTSLT 666

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++LE M 
Sbjct: 667 HRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMS 726

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+ P+T T+ +LI GH K G+ + A+   D M   G +PN+  +N ++ GL   GR+ 
Sbjct: 727 GRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIG 786

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           E+  +L +  +R ++   +TY IL++ + KQ+   +A+ L+C MV  G  P +  Y  LI
Sbjct: 787 ESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALI 846

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F E    G+ PT  TY  ++ G+ +  N +   K+ + M + G +
Sbjct: 847 SDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFS 906

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESM 568
           P   T  ++     K     EA +  +++
Sbjct: 907 PSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 187/414 (45%), Gaps = 4/414 (0%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E AE +F EM  RGV  D  +Y  ++    + G +  A +    + ++  + D    
Sbjct: 503 GKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVY 562

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C     G  K+A   LEEM   G KP+  T+  +I    ++G T KA +L   
Sbjct: 563 NVFINCLC---MLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + RS + KPN+ TY+ +I G  +   + +A+ LL  M   G  P + T+  ++    +  
Sbjct: 620 MKRS-SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGR 678

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   ++ + M   G   +I  YN ++  LC  G  ++A  +L++   R +  D IT+ 
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFN 738

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  H K      A   + +M+  G++P++  + TL+       ++ ES+    E    
Sbjct: 739 ALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKR 798

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P+  TY  ++ GY +  N   AV+ +  M   G  P   TY ALIS   K   + +A
Sbjct: 799 GIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQA 858

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
            + +  M  +G+ P   T   L   + K  +       L+ + +K +  +  TL
Sbjct: 859 KELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTL 912



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 235/556 (42%), Gaps = 91/556 (16%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM--------VSSFAEI--GRLKEGF-----SMVIEMT 180
           Y V   +L   GN + A +V+  M        V +F+ I  G +K G+       + EM 
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMK 446

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G+     T   V+  + +    E A +V+ EM   GV  +      +V    + G++ 
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTH 299
           +A+     M +RG +LD+   T LI    D  F+ G++  AF++ +E+  K   P+   +
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLI----DGLFKTGNLPAAFKVGQELTEKNLLPDAVVY 562

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            V I+ LC  G +++A   FL+ ++S   KP+  TY  MI+   +E K  +A  LL  MK
Sbjct: 563 NVFINCLCMLGKSKEA-ESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP------------------- 400
              + PN  TY++LI G  + G  E+A  L++ M   G +P                   
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSD 681

Query: 401 ----------------NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
                           +I  YN ++  LC  G  ++A  +L++   R +  D IT+  L+
Sbjct: 682 LILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALI 741

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL-------------------------- 478
             H K      A   + +M+  G++P++  + TL                          
Sbjct: 742 LGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIE 801

Query: 479 ---------IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
                    +  + +Q    E+ + + E +  G  P   TY ++I  + + G +S A + 
Sbjct: 802 PSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKEL 861

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F  M   G  P + TY  L+SG  K     E  +F + M  KG SP + T  +++  + K
Sbjct: 862 FNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSK 921

Query: 590 QGDSATAMIILESLDK 605
            G S  A  +L++L K
Sbjct: 922 PGMSWEARRLLKNLYK 937



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 201/461 (43%), Gaps = 33/461 (7%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG----- 253
           C+ G V+ AE+V  EM  + +  +  ++  ++    + G V +A  ++  M +RG     
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 254 ----AILDN--------ATLTLLITAFCD-------------KGFR--GSIKQAFELLEE 286
                ++D         A L +     C+              G +  G I++A  L  E
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G   +   +T LIDGL K G    AF++  +L    N  P+   Y   I+  C   
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK-NLLPDAVVYNVFINCLCMLG 573

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   AE  LE M+  GL P+  TY ++I    + G   +A  L++ M +    PN+  Y+
Sbjct: 574 KSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYS 633

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GL + G V++A  LL +          +T+  +L    +   +   L +   M+ A
Sbjct: 634 TLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNA 693

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL  DI  Y TL+   C     +++    +E    G+ P   T+ ++I G+ + G++ +A
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              + +M   G +P+  T+  L+ GL    ++ E+      M  +GI P  +T   L   
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           Y KQ +   A+ +   +  K ++  V+T    +    +VGM
Sbjct: 814 YGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 209/451 (46%), Gaps = 12/451 (2%)

Query: 179 MTNNGLPLIT-STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           M ++G P  T +T N ++   C    + +A+     M   G   DA ++  +++ YCR  
Sbjct: 119 MYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQ 178

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++  A      M  RG   D  +   LI  FC+ G    + +A EL  E+     +P++Y
Sbjct: 179 QLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG---RVDEALELFRELE----QPDMY 231

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           TH  L+ GLC     E+   +  K+ +   ++P    Y A++  +C+E+K   AE +L  
Sbjct: 232 THAALVKGLCDARRGEEGLYMLQKM-KELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M + GL+P   T T+++  +C+ G    A  + + M  +GC PN++ YNA++ G C  G+
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V +A  LL +  +  ++ D +TY +L+         + A  L   M   GL  D + Y  
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNV 410

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI A C+  K+ E+   F      G+ P   T+ ++I G  + G    A  + ++M   G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           CAPD  TY   I  LCK     E   F + M+ K + P  V    +     K+ +   A 
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530

Query: 598 II---LESLDKKLWIRTVNTLIRKLCSEKRV 625
            I   + SL     + T  T +R  C+E R+
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYCNEGRL 561



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 4/387 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R +EG  M+ +M   G    T     +V + C     E AE++ +EM   G
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A +   +V AYCR GR++ A R   +M  +G   +  T   ++  FC+ G    + 
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVG---KVY 352

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL++M   G +P+V T+ +LI G C  G  E AFRL L+L+  +    + +TY  +
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL-LRLMEGNGLAADQYTYNVL 411

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK  K++ A  L + ++ +G+ PN+ T+ ++I G CK G F+ A   ++ M   GC
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+  I+ LCK    +E    + +  Q++++   + YTI++    K+     A  
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ +MV  G +PD+  YTT + A+C + ++ E+E    E    G+      Y ++I G+ 
Sbjct: 532 IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITY 545
             G    AV   + M  +   P++ T+
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 207/457 (45%), Gaps = 37/457 (8%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G      T N ++   C    ++ A+++FD+M  RG   DA SY  ++  +C  GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDK----------------GFRGSIK---- 278
           V EA      +       D  T   L+   CD                 G+R + +    
Sbjct: 215 VDEALELFRELEQP----DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 279 ------------QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                       +A ++L EM   G  P   T T +++  C++G    A R+F + ++  
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF-ESMKLK 329

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             +PNV TY AM+ G+C   K+ +A  LL++M+E G+ P+  TY  LI G C  G+ E A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + L+ LM   G   + Y YN +ID LCK G+V EA  L      R ++ + +T+  +++ 
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +   A     +MV AG  PD + Y+  I   C+ K  +E   F  E +   + P+
Sbjct: 450 LCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPS 509

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              YT +I    ++ N   A + + +M  +GC+PD +TY   +   C + +L EA     
Sbjct: 510 TVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVM 569

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            M   GI    +   TL   +   G +  A+ IL+ +
Sbjct: 570 EMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 164/367 (44%), Gaps = 9/367 (2%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T   L+    +   T    RLF  +       P   TY A+I   C+   +  A+  L  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M   G  P+  T+ SLI G+C+    + A DL D M   G + +  +Y A+I+G C+ GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 418 VQEAYELLKKAFQREL-QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           V EA EL      REL Q D  T+  L+         ++ L +  +M + G  P   AY 
Sbjct: 215 VDEALELF-----RELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYA 269

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            L+  +CR++K +E+EK   E    GL P   T T+++  Y R+G +S AV+ F+ M   
Sbjct: 270 ALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK 329

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC P+  TY A++ G C   K+ +A    + M   G+ P  VT   L    C  G   +A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389

Query: 597 MIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             +L  ++         T N LI  LC   +V  A   F  L  +    + V+   + N 
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 654 CYESNKY 660
             +  K+
Sbjct: 450 LCKGGKF 456



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 200/484 (41%), Gaps = 23/484 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV  F  +G++ +  +++ +M   G+     T N ++   C  G +E A  +   M   G
Sbjct: 341 MVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y +++ A C+ G+V EA      +  RG   ++ T   +I   C KG  G   
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC-KG--GKFD 457

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   LE+MV  G  P+ YT++  I+ LCK   + +      ++++ D  KP+   YT +
Sbjct: 458 VACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD-VKPSTVNYTIV 516

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I    KE     A  +  +M   G  P+  TYT+ +  +C  G    A +++  M K G 
Sbjct: 517 IDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGI 576

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL-------------- 444
             +  AYN +IDG    G+   A  +LK         +  T+ ILL              
Sbjct: 577 IVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPL 636

Query: 445 --SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
             +   K  E      LF  M K  +     AY  ++  F  ++++ E            
Sbjct: 637 KTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDD 696

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L   ++ YTS++  + +      A      M   G  P+ I+Y  L+SG   + + D A 
Sbjct: 697 LPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAK 756

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMI-ILESLDKKLWIRTVNTLIRKL 619
           + +  +  K  +  E+    +     +QG  D    MI ILE +  K    T   L  +L
Sbjct: 757 EIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816

Query: 620 CSEK 623
            + +
Sbjct: 817 STRE 820


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 196/417 (47%), Gaps = 55/417 (13%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           +++  E+ + EM   GV  +  +        C  G+  +A + +  M+ +G + D++T +
Sbjct: 405 ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   CD      +++AF L EEM R G  P+VYT+T+LID  CK G  ++A + F ++
Sbjct: 465 KVIGFLCDAS---KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +      PNV TYTA+I  Y K ++M  A+ L E M  +G  PN  TYT+LI GHCK G 
Sbjct: 522 LHK-GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580

Query: 383 FERA---------------------------------------------------YDLMD 391
            E+A                                                   ++L+D
Sbjct: 581 IEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   GC PN   Y+A+IDG CK G++Q+A E+  K  +R    +  TY+  +    K  
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
                L +  +M++    P++  YT ++   C+  K  E+ K   +    G  P   TYT
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYT 760

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +MI G+ + G I   ++ F+ M   GCAP+ ITY  LI+  C    LDEA +  + M
Sbjct: 761 AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 223/468 (47%), Gaps = 34/468 (7%)

Query: 160 VSSFAEI----GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VS+FA      G+  + F ++ EM   G     ST ++V+G  C+   VE A  +F+EM 
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMK 487

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+     +Y +++ ++C+ G + +A +W   ML +G   +  T T LI A+       
Sbjct: 488 RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAK--- 544

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF---------------L 320
            +  A EL E M+ +G KPNV T+T LIDG CK G  EKA +++                
Sbjct: 545 QMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF 604

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           KL  ++   PNV TY A++ G CK  ++  A  LL+ M   G  PN   Y ++I G CK+
Sbjct: 605 KLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKI 664

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M + G +PN+Y Y++ ID L K  R+    ++L K  +     + + Y
Sbjct: 665 GKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIY 724

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K  +T +A  L  +M + G NP++  YT +I  F +  K+++  + F++  +
Sbjct: 725 TEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCS 784

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----- 555
            G  P   TY  +I     +G +  A K    M Q       +++  +I G  ++     
Sbjct: 785 KGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSI 844

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             LDE  +  ES+      P +     L   Y K G    A+ +LE +
Sbjct: 845 GLLDELSE-NESV------PVDSLYRILIDNYIKAGRLEVALDLLEEI 885



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 222/504 (44%), Gaps = 33/504 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    +L   + +  EM +    +   TL+      C+ G    A ++ DE  A  
Sbjct: 217 LIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AED 274

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  MV   C      EA   L  M     I +  T  +L++    KG  G  K
Sbjct: 275 FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCK 334

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   +L  M+ +G  PN      LI   CK      A++LF K+++    +P    Y   
Sbjct: 335 R---ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKC-GCQPGYLVYNIF 390

Query: 339 ISGYCKEEKMNRAEML------LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-D 391
           I   C  E+   +++L         M + G++ N    ++     C  G F++A+ ++ +
Sbjct: 391 IGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICE 450

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           +MGK G  P+   Y+ +I  LC   +V++A+ L ++  +  +     TYTIL+    K  
Sbjct: 451 MMGK-GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAG 509

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             +QA   F  M+  G  P++  YT LI A+ + K+M  +++ F+  +  G  P   TYT
Sbjct: 510 LIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYT 569

Query: 512 SMICGYLRDGNISSAVKYFQRM---------------NQIGC-APDNITYGALISGLCKQ 555
           ++I G+ + G I  A + + RM               +   C  P+ ITYGAL+ GLCK 
Sbjct: 570 ALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKA 629

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTV 612
           +++ EA +  ++M+  G  P ++    +   +CK G    A  +   + ++ +   + T 
Sbjct: 630 NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 689

Query: 613 NTLIRKLCSEKRVGMAALFFHKLL 636
           ++ I  L  + R+ +      K+L
Sbjct: 690 SSFIDCLFKDNRLDLVLKVLSKML 713



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 8/335 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R+KE   ++  M  +G        + V+   C++G ++ A+EVF +M  RG
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y   +    +  R+    + LS ML+     +    T ++   C     G   
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI---GKTD 738

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A++L+ +M  KG  PNV T+T +IDG  K G  E+   LF  +  S    PN  TY  +
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC-SKGCAPNFITYRVL 797

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C    ++ A  LL+ MK+     +  ++  +I G  +   F  +  L+D + +   
Sbjct: 798 INHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENES 855

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA--DKITYTILLSEHLKQAETKQA 456
            P    Y  +ID   K GR++ A +LL++       A  +K  Y  L+      ++  +A
Sbjct: 856 VPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKA 915

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           L L+  M+   + P++     LI    +  K +E+
Sbjct: 916 LELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 17/354 (4%)

Query: 297 YTHTV-----LIDGL-CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           Y+HT      L+D L C     ++    FL  ++ D+++        ++   C+    N 
Sbjct: 135 YSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNM 194

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   L R+K+ G  P+  TY +LI    +    + AY +   M       + Y  +    
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK G+ +EA++L+ +A   +   D + Y  ++S   + +  ++A+ +  RM  +   P
Sbjct: 255 SLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           ++  Y  L++   R+ ++   ++     IT G +P +E + S+I  Y +  + S A K F
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVTRVTLA 584
           ++M + GC P  + Y   I  +C   +      LD   + Y  M+  G+   +V     A
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432

Query: 585 YEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKL 635
              C  G    A  I+  +  K ++    T + +I  LC   +V  A   F ++
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEM 486



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 12/237 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV    +IG+  E + ++++M   G      T   ++    + G +E   E+F +MC++G
Sbjct: 727 MVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR---GAILDNATLTLLITAFCDKGFRG 275
              +  +Y++++   C  G + EA + L  M        IL +  +         +GF  
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII--------EGFSQ 838

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK-PNVHT 334
               +  LL+E+      P    + +LID   K G  E A  L  ++  S ++   N + 
Sbjct: 839 EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYL 898

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           Y ++I       K+++A  L   M  + ++P  +    LI G  KV  ++ A  L D
Sbjct: 899 YASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSD 955


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 224/492 (45%), Gaps = 40/492 (8%)

Query: 139 CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
           C    +S   F     V   ++  + ++G + E   +  +M + G+   + TLN ++   
Sbjct: 347 CVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGF 406

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   +  AE V +EM  RG+  +  S+ +++   C   R   A  ++  ML R    ++
Sbjct: 407 CKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPND 466

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             LT L++  C  G +G   +A EL   ++ KG+ PN+ T   LI GLCK G  ++  +L
Sbjct: 467 GLLTTLVSGLCKAGKQG---EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKL 523

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
              ++        + TY  +ISG CKE K+     L E M ++G+ P+  T+  L++G C
Sbjct: 524 LRDMLERGLVFDRI-TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLC 582

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
                + A  L     K G  PN+Y Y  +IDG CK  +V+E   LL +   ++L+ + +
Sbjct: 583 NADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSV 642

Query: 439 TYTILLSEH-----------LKQAETKQALGLFC------------------------RM 463
            Y  L+  +           L+     + + L C                         M
Sbjct: 643 VYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEM 702

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K GL P++  YTT+I  + +  +M +     QE  +  + P K TYT MI G+ + G  
Sbjct: 703 RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKT 762

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A K    M + G  PD +TY A  +GLCK+ K++EA +  + M    +   E+T  TL
Sbjct: 763 KEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTL 822

Query: 584 AYEYCKQGDSAT 595
             + C Q  +AT
Sbjct: 823 I-DGCHQPSTAT 833



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 270/603 (44%), Gaps = 36/603 (5%)

Query: 92  IDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER 151
           +  L+ ++  +   +L +      AL+FF++     KFR   R Y V    L+ N     
Sbjct: 79  VPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSP 138

Query: 152 AHEVMQCMV-------------SSFAEIGRLKEGFSMVIEMT-----NNGLPLITSTLNR 193
           A  ++  ++             S   EI ++   F++V E        + L  + ST  +
Sbjct: 139 ARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFK 198

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
            +G         +A +VF  +  +G+     +   ++ +  +   + ++      +   G
Sbjct: 199 HLGFG-------FAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGG 251

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            I D    + +I AFC KG R     A  L  +M + G  PNV T+  +I GLCK G  +
Sbjct: 252 IIPDVHLFSTMINAFC-KGHRED--DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLD 308

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A+R   K+V+ +   P++ TY+  I+G  K EK++ A  +L+ M E G +PN   Y +L
Sbjct: 309 EAYRFKEKMVK-EKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTL 367

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+CK+GN   A  + D M  +G +PN    N++I G CK  ++ +A  +L++   R L
Sbjct: 368 IDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             ++ +++++++    +     AL     M+   L P+    TTL++  C+  K  E+ +
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVE 487

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            +   +  G  P   T  ++I G  + GN+   +K  + M + G   D ITY  LISG C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           K+ K+ E  +  E M+ KGI P   T   L +  C       A  +     K  ++  V 
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 614 T---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALF---SDL 666
           T   +I   C   +V       ++L+ K   ++ V   +L  A C   N  A F    D+
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667

Query: 667 SQR 669
             R
Sbjct: 668 KSR 670



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 229/504 (45%), Gaps = 7/504 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GRL E +    +M    +     T +  +    +L  ++ A  V  EM   G
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +   Y  ++  YC+MG ++EA +    ML +G   ++ TL  LI  FC       I 
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSD---QIG 413

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  +LEEM+ +G   N  + +++I+ LC K     A   F++ +   N +PN    T +
Sbjct: 414 QAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH-FIREMLLRNLRPNDGLLTTL 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG CK  K   A  L  R+  +G +PN  T  +LI+G CK GN +    L+  M + G 
Sbjct: 473 VSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL 532

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   YN +I G CK+G+V+E +EL ++  ++ +Q D  T+ +LL       +  +A  
Sbjct: 533 VFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+    K G  P+++ Y  +I  +C+  K++E E    E ++  L      Y S+I  Y 
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +GN+++A +    M   G      TY +L+ GLC    +D+A    + M  +G+ P  V
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
              T+   Y K G      I+L+ +          T   +I   C   +   AA   +++
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM 772

Query: 636 LGKDQNVDRVSLAALKNACYESNK 659
             K    D V+  A  N   +  K
Sbjct: 773 TEKGILPDAVTYNAFTNGLCKEGK 796


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 162/614 (26%), Positives = 250/614 (40%), Gaps = 86/614 (14%)

Query: 140 ATSLISNGNFERAHEVM--QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           A +L   G    A +V+    +++ +  +G      S+   MT  GLP+     N +V  
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
            C  G V+ A  V D M   GV  + ++Y   +V YCR   V EA      M+  G +LD
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 258 NATLTLLITAFCDKG--------FR------------------------GSIKQAFELLE 285
             TL+ L+   C  G        FR                        G  K+   LL 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           EMV +G   ++ T+T L+D L K+G T++  +  L+   SDN   N  TYT +I   CK 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEV-KDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             ++ AE +L  M+E+ + PN  T++S+I G  K G  ++A +   +M + G  PN+  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 406 NAIIDG-----------------LC------------------KKGRVQEAYELLKKAFQ 430
             +IDG                 LC                  + G+++EA  L K A  
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  D + YT L+    K  +   A      ++   + PD   Y   I   C   K KE
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++    E    GL P + TY +MI  + R G  + A+K    M      P+ ITY  L++
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
           GL     +++A      M+  G SP  +T   +  + C Q      +     LD   W  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV-LQACSQSRRLDVI-----LDIHEWMM 686

Query: 609 -------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKY 660
                  I   NTL++ LC       A +   ++LG     D ++  AL    C  S+  
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 661 ALFSDLSQRIAEGI 674
             F+  +Q + + I
Sbjct: 747 NAFATYAQMLHQNI 760



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 39/425 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +V+   + G+++E  ++  + + +GL L       ++    + G +  A +   E+
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  DA  Y + +   C +G+  EA   L+ M + G   D +T   +I + C KG  
Sbjct: 546 MDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKG-- 603

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
               +A +LL EM     KPN+ T+  L+ GL   G  EKA  L  ++V S  + P    
Sbjct: 604 -ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV-SAGFSPSSLT 661

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C      +A ++LE M 
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G+ P+T T+ +LI GHCK  + + A+     M  +  +PNI  +N ++ GL   GR+ 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L +  +  L+ + +TY IL++ H KQ+   +A+ L+C MV  G  P +  Y  LI
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F++    G+ PT  TY  ++ G+ R  N +   K  + M + G +
Sbjct: 842 SDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901

Query: 540 PDNIT 544
           P   T
Sbjct: 902 PSKGT 906



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 208/455 (45%), Gaps = 43/455 (9%)

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
           +A  V  EMC RGV  D  +   ++   CR G+V  A    +A+ DRG            
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA----AALADRG------------ 161

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                    G I  A +++      GW         LI G C+ G T  A  +  ++  +
Sbjct: 162 ---------GGI-HALDVI------GWN-------TLIAGYCRVGDTPAALSVADRMT-A 197

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
                +V  Y  +++G+C+  +++ A  +L+ MKE G+ PN  TYT  I  +C+    E 
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A+DL + M + G   ++   +A++ GLC+ GR  EAY L ++  +     + +TY  L+ 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLID 317

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K    K+ L L   MV  G+  D+  YT L+    +Q K  E +   + A++  L  
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL 377

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT +I    +  N+  A +    M +   +P+ +T+ ++I+G  K+  LD+A ++ 
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 566 ESMIGKGISPCEVTRVTLAYEYCK-QGDSATAMIILESLDKKLWIR--TVNTLIRKLCSE 622
             M  +GI+P  VT  TL   + K QG  A   +  + L + + +    V++L+  L   
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
            ++  A   F    G   ++D V+   L +  +++
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 209/451 (46%), Gaps = 10/451 (2%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA-DASSYKLMVVA 232
           +++ EM   G+P    T+N ++   C  G V+ A  + D     G+ A D   +  ++  
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAG 178

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YCR+G    A      M  +G  +D      L+  FC     G +  A  +L+ M   G 
Sbjct: 179 YCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA---GQVDAARGVLDMMKEAGV 235

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PNV T+T  I   C+    E+AF L+  +VR +    +V T +A+++G C++ + + A 
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR-NGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L   M + G +PN  TY +LI    K G  +    L+  M   G   ++  Y A++D L
Sbjct: 295 ALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            K+G+  E  + L+ A    L  + +TYT+L+    K     +A  +   M +  ++P++
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             ++++I  F ++  + ++ ++ +     G+ P   TY ++I G+ +     +A++ +  
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G   +     +L++GL +  K++EA   ++   G G+S   V   TL     K GD
Sbjct: 475 MLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534

Query: 593 SATAMIILESL-DKKLWIRTV--NTLIRKLC 620
             TA    + L D+ +    V  N  I  LC
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 4/378 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E A  +F +    G+  D  +Y  ++    + G +  A ++   ++DR  + D    
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            + I   C     G  K+A  +L EM   G KP+  T+  +I   C+KG T KA +L L 
Sbjct: 558 NVFINCLC---ILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL-LH 613

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++  + KPN+ TY  +++G      + +A+ LL  M   G  P++ T+  ++    +  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   D+ + M   G   +I  YN ++  LC  G  ++A  +L++     +  D IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  H K +    A   + +M+   ++P+I  + TL+       ++ E+     E   +
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P   TY  ++ G+ +  N   A++ +  M   G  P   TY ALIS   K   + +A
Sbjct: 794 GLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 562 CQFYESMIGKGISPCEVT 579
            + ++ M  +G+ P   T
Sbjct: 854 KELFKDMQKRGVHPTSCT 871



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 219/550 (39%), Gaps = 103/550 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITST-------------------------- 190
           ++ S A+ GR KE  S++ EM + G  + L+T T                          
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 191 --LNRV-----VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
             LN V     +   C+   V+ AE+V  EM  + +  +  ++  ++  + + G + +A 
Sbjct: 375 LSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 244 RWLSAMLDRGAILDNATLTLLITAF-----------------CD-------------KGF 273
            +   M +RG   +  T   LI  F                 C+              G 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494

Query: 274 R--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           R  G I++A  L ++    G   +   +T LIDGL K G    AF+ F + +   N  P+
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK-FGQELMDRNMLPD 553

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y   I+  C   K   A+ +L  M+  GL P+ +TY ++I  HC+ G   +A  L+ 
Sbjct: 554 AVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M      PN+  YN ++ GL   G V++A  LL +          +T+  +L    +  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
                L +   M+ AGL+ DI  Y TL+   C     +++    +E + +G+ P   T+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 512 SMICGYLRDG---------------NISSAVKYFQ--------------------RMNQI 536
           ++I G+ +                 NIS  +  F                      M + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P+N+TY  L++G  KQS   EA + Y  M+GKG  P   T   L  ++ K G    A
Sbjct: 794 GLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 597 MIILESLDKK 606
             + + + K+
Sbjct: 854 KELFKDMQKR 863


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 191/375 (50%), Gaps = 4/375 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G  + A ++   +  R +  D   Y +++ + C+   V EA    S M  +    + 
Sbjct: 185 CKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNV 244

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T LI  FC     G + +A  LL EM  K   P+VYT ++LID L K+G   KA ++
Sbjct: 245 VTYTTLIYGFC---IMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM-KAAKI 300

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L ++     KP+V TY +++ GY    ++  A+ +   M + G+ P   +YT +I G C
Sbjct: 301 VLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLC 360

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K    + A  L + M  +   PN   +N++IDGLCK GR+   ++L+ K   R   AD I
Sbjct: 361 KTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVI 420

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY+ L+    K     QA+ LF +M+   + PD++ YT LI   C+  ++K +++ FQ  
Sbjct: 421 TYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHL 480

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G      TYT MI G+ + G    A+    +M   GC P+ IT+  +I  L ++ + 
Sbjct: 481 LIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEN 540

Query: 559 DEACQFYESMIGKGI 573
           D+A +    MI +G+
Sbjct: 541 DKAEKLLREMIARGL 555



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 203/407 (49%), Gaps = 7/407 (1%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+ +D  +  +++  +C +G++T +   L+ +L RG   D  TLT LI   C    RG 
Sbjct: 98  KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLC---LRGE 154

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A +  +++V   ++ +  ++  LI+GLCK G T+ A +L   L    + KP+V  Y 
Sbjct: 155 VKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL-EERSIKPDVVMYN 213

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + +  A  L   M  + + PN  TYT+LIYG C +G    A  L++ M  +
Sbjct: 214 IIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLK 273

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++Y ++ +ID L K+G+++ A  +L    +  ++ D +TY  L+  +    E K A
Sbjct: 274 NINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHA 333

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +F  M ++G+ P + +YT +I   C+ K + E+   F+E     + P   T+ S+I G
Sbjct: 334 KYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDG 393

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G I+       +M       D ITY +LI  LCK   LD+A   ++ MI + I P 
Sbjct: 394 LCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPD 453

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLC 620
             T   L    CK G    A  + + L  K   L IRT   +I   C
Sbjct: 454 MYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 167/391 (42%), Gaps = 37/391 (9%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L + +  KG   ++ T  +LI+  C  G    +F +   +++   Y P+V T T +I
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKR-GYHPDVITLTTLI 146

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C   ++ +A    + +       +  +Y +LI G CK+G  + A  LM  + +    
Sbjct: 147 KGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIK 206

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  YN IID LCK   V EA  L  +   +++  + +TYT L+          +A+ L
Sbjct: 207 PDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVAL 266

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M    +NPD++ ++ LI A  ++ KMK ++      + A + P   TY S++ GY  
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  A   F  M Q G  P   +Y  +I GLCK   +DEA   +E M  K + P  +T
Sbjct: 327 VNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTIT 386

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
                                            N+LI  LC   R+        K+  + 
Sbjct: 387 --------------------------------FNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 640 QNVDRVSLAALKNA----CYESNKYALFSDL 666
           Q  D ++ ++L +A    C+     ALF  +
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKM 445



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 152/346 (43%), Gaps = 3/346 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    +  ++S   K ++   A  L + +  +G+  +  T   LI   C +G    ++ +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  + K G  P++     +I GLC +G V++A +        E Q D+I+Y  L++   K
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             ETK A+ L   + +  + PD+  Y  +I + C+ K + E+   + E     ++P   T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G+   G +  AV     M      PD  T+  LI  L K+ K+  A      M+
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVG 626
              + P  VT  +L   Y    +   A  +  S+ +      +++   +I  LC  K V 
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            A   F ++  K+   + ++  +L +   +S + A   DL  ++ +
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +   + E  S+  EM +  +   T T N ++   C+ G + Y  ++ D+M  R 
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             AD  +Y  ++ A C+   + +A      M+ +    D  T T+LI   C KG  G +K
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC-KG--GRLK 471

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+ + ++ KG+  ++ T+TV+I G CK G  ++A  L  K+   +   PN  T+  +
Sbjct: 472 IAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKM-EDNGCIPNAITFDII 530

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I    ++++ ++AE LL  M  +GLL
Sbjct: 531 ICALFEKDENDKAEKLLREMIARGLL 556


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 219/442 (49%), Gaps = 40/442 (9%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P + +    + G+ C++G VE A  +   +       ++ S+  ++  +C+ G V EA +
Sbjct: 354 PTVVTYSTYIHGL-CKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQ 412

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M   G + D  + ++LI AFC KG    + +  +L+EEM     KP++ ++T LI 
Sbjct: 413 VLEEMKSSGILPDVYSYSILINAFCGKG---DVMKCLDLMEEMEHSQIKPSIVSYTSLIH 469

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCKK   + A  +F   + + + K +   Y  +I G+C +  M+ A  LLE M    L+
Sbjct: 470 GLCKKNMLQNAVDIFHS-IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELV 528

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP------------------------ 400
           P   +  SLI G+ K+G F++A ++ + M ++G  P                        
Sbjct: 529 PTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTL 588

Query: 401 -----------NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
                      N ++YNAII  LCK+G  + A ELL +  +R +    + Y+ L+S   K
Sbjct: 589 LEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAK 648

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           Q+  K+A+ LF RMVK G+  +I  YT L++ F    KM E+   F+E    GL   + +
Sbjct: 649 QSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQIS 708

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G+  +  +  A   F+ M++ GC+P+ ITY  +I G CK +++D A   ++ M 
Sbjct: 709 YTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMN 768

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
              + P  VT   L   Y K G
Sbjct: 769 RDSVIPDVVTYTVLIDWYHKHG 790



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 232/546 (42%), Gaps = 78/546 (14%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L S  + ER+  V   ++S FA    L+    +     + GL     T N ++    E  
Sbjct: 237 LDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEAN 296

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLM--------------------------------V 230
            VE+   VF+E+  RG   +  +Y +M                                V
Sbjct: 297 RVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTV 356

Query: 231 VAY-------CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           V Y       C++G V  A   +  +      L++ +   +I  FC    RG + +A ++
Sbjct: 357 VTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCK---RGEVFEALQV 413

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           LEEM   G  P+VY++++LI+  C KG   K   L  ++  S   KP++ +YT++I G C
Sbjct: 414 LEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHS-QIKPSIVSYTSLIHGLC 472

Query: 344 KEE-----------------------------------KMNRAEMLLERMKEQGLLPNTN 368
           K+                                     M+ A  LLE M    L+P   
Sbjct: 473 KKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAF 532

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +  SLI G+ K+G F++A ++ + M ++G  P+  A N I+DG C+ G  +EA  LL+  
Sbjct: 533 SCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDF 592

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +     +  +Y  ++ +  K+   ++AL L  RM+K  + P +  Y+TLI+ F +Q   
Sbjct: 593 QEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNF 652

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           K +   F   +  G+     TYT ++  +     +  A   F+ M + G   D I+Y  L
Sbjct: 653 KRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           I G C   ++ +A   +E M  +G SP  +T   +   +CK      A  + + +++   
Sbjct: 713 IVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSV 772

Query: 609 IRTVNT 614
           I  V T
Sbjct: 773 IPDVVT 778



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 207/507 (40%), Gaps = 75/507 (14%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           ++E A +VF      G+  D  +   ++       RV    R    + DRG   +  T T
Sbjct: 262 MLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYT 321

Query: 263 LLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           +++  +C D G    ++QA  +L ++ R G KP V T++  I GLCK G  E A  L ++
Sbjct: 322 IMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALML-IR 380

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +   N   N H++  +I G+CK  ++  A  +LE MK  G+LP+  +Y+ LI   C  G
Sbjct: 381 NLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKG 440

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           +  +  DLM+ M      P+I +Y ++I GLCKK  +Q A ++         + D   Y 
Sbjct: 441 DVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYE 500

Query: 442 ILLSEHLKQAET-----------------------------------KQALGLFCRMVKA 466
            L+     Q +                                     QAL +F  M++ 
Sbjct: 501 TLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRD 560

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKF---FQE-------------------------- 497
           G+ PD  A   ++   CR    KE+      FQE                          
Sbjct: 561 GIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERA 620

Query: 498 ------AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                  +   + P+   Y+++I G+ +  N   AV  F RM ++G   +  TY  L+S 
Sbjct: 621 LELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSI 680

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LW 608
                K+ EA   ++ M  +G+   +++  TL   +C   +   A  + E + ++     
Sbjct: 681 FSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPN 740

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + T   +I   C   R+ +A   F K+
Sbjct: 741 VITYTCIIDGFCKSNRIDLATWVFDKM 767



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 184/398 (46%), Gaps = 12/398 (3%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR----LFLKLVRSDNYKPNVHTYTAM 338
           + EE+  +G  PN+YT+T++++  C     +   R    +  K+ RS   KP V TY+  
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGE-KPTVVTYSTY 362

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK   +  A ML+  +       N++++  +IYG CK G    A  +++ M   G 
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGI 422

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++Y+Y+ +I+  C KG V +  +L+++    +++   ++YT L+    K+   + A+ 
Sbjct: 423 LPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVD 482

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  +  +    D   Y TLI  FC Q  M  + K  +E I   L PT  +  S+I GY 
Sbjct: 483 IFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYY 542

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G    A++ F  M + G  PD I    ++ G C+     EA    E     G +    
Sbjct: 543 KLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPH 602

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKL 635
           +   + Y+ CK+G    A+ +L  + K+  + +V   +TLI     +     A   F ++
Sbjct: 603 SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRM 662

Query: 636 LGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
           +      +  +   L +    S+K    Y +F ++ +R
Sbjct: 663 VKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 4/317 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V + ++  F   G +     ++ EM  N L     +   ++    +LGL + A EVF+ M
Sbjct: 498 VYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAM 557

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  +   ++   CR G   EA   L    + G  L+  +   +I   C +G+ 
Sbjct: 558 LRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYP 617

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              ++A ELL  M+++   P+V  ++ LI G  K+   ++A  LF ++V+      N+ T
Sbjct: 618 ---ERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKV-GITFNIAT 673

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++S +    KM+ A  + + MKE+GL  +  +YT+LI G C     ++A+ L + M 
Sbjct: 674 YTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMS 733

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +EGC+PN+  Y  IIDG CK  R+  A  +  K  +  +  D +TYT+L+  + K     
Sbjct: 734 REGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFD 793

Query: 455 QALGLFCRMVKAGLNPD 471
           QA  L+  M   G+ PD
Sbjct: 794 QAHKLYDVMKDKGVLPD 810


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 216/454 (47%), Gaps = 41/454 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F E   L++   +  EM  +G      T   ++   C+ G ++ A     EM   G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD   Y  ++  +C  G +         +L+RG      T   LI  FC     G +K
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---LGQLK 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ E M+ +G +PNVYT+T LIDGLC  G T++A +L   ++  D  +PN  TY  +
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNII 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I+  CK+  +  A  ++E MK++   P+  TY  L+ G C  G+ + A  L+ LM K+  
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418

Query: 398 -CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++ +YNA+I GLCK+ R+ +A ++     ++    D++T  ILL+  LK  +  +A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478

Query: 457 L-----------------------------------GLFCRMVKAGLNPDIHAYTTLIAA 481
           +                                   GL C+M  + L P +  Y  L+++
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C++  + ++ + F+E      FP   ++  MI G L+ G+I SA      M++ G +PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             TY  LI+   K   LDEA  F++ M+  G  P
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 221/486 (45%), Gaps = 38/486 (7%)

Query: 107 LANE-AGSMVALSFFYW---------------AIGFAKFRHFMRLY--IVCATSLISNGN 148
           LANE  GS  + S   W               A+GF K   FM L   +V  TSLI    
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR--- 255

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
                         F + G L  G ++  E+   G      T N ++   C+LG ++ A 
Sbjct: 256 -------------GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+F+ M  RGV  +  +Y  ++   C +G+  EA + L+ M+++    +  T  ++I   
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G    +  A E++E M ++  +P+  T+ +L+ GLC KG  ++A +L   +++  +Y
Sbjct: 363 CKDGL---VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 329 -KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V +Y A+I G CKE ++++A  + + + E+    +  T   L+    K G+  +A 
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L   +       N   Y A+IDG CK G +  A  LL K    ELQ     Y  LLS  
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+    QA  LF  M +    PD+ ++  +I    +   +K +E        AGL P  
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ +I  +L+ G +  A+ +F +M   G  PD     +++     Q + D+  +  + 
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 568 MIGKGI 573
           ++ K I
Sbjct: 660 LVDKDI 665



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 209/471 (44%), Gaps = 46/471 (9%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +  EM    +  D  SY  ++  +C    + +A    + M   G      T  +LI 
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RS 325
           AFC     G + +A   L+EM   G + ++  +T LI G C  G  ++   LF +++ R 
Sbjct: 221 AFCKA---GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D+  P   TY  +I G+CK  ++  A  + E M E+G+ PN  TYT LI G C VG  + 
Sbjct: 278 DS--PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L++LM ++   PN   YN II+ LCK G V +A E+++   +R  + D ITY ILL 
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395

Query: 446 EHLKQAETKQALGLFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQ---EAIT 500
               + +  +A  L   M+K     +PD+ +Y  LI   C++ ++ ++   +    E + 
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455

Query: 501 AG--------------------------------LFPTKETYTSMICGYLRDGNISSAVK 528
           AG                                +    +TYT+MI G+ + G ++ A  
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              +M      P    Y  L+S LCK+  LD+A + +E M      P  V+   +     
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575

Query: 589 KQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           K GD  +A  +L  + +      + T + LI +      +  A  FF K++
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 3/330 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF +L  M+++G+  NVY H +L+ GLC+     KA  L L+ +R ++  P+V +Y  +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL-LREMRRNSLMPDVFSYNTVI 184

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C+ +++ +A  L   MK  G   +  T+  LI   CK G  + A   +  M   G  
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            ++  Y ++I G C  G +     L  +  +R      ITY  L+    K  + K+A  +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M++ G+ P+++ YT LI   C   K KE+ +     I     P   TY  +I    +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG--ISPCE 577
           DG ++ AV+  + M +    PDNITY  L+ GLC +  LDEA +    M+       P  
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           ++   L +  CK+     A+ I + L +KL
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKL 454



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 8/399 (2%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGL--CKKGWTEKAFRL-FLKLVRSDNYKPNVHTYTAM 338
           EL     RK  + + + + V + GL  C     +  F    L L+    +  NV+ +  +
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  +  +A  LL  M+   L+P+  +Y ++I G C+    E+A +L + M   GC
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + ++  +  +ID  CK G++ EA   LK+     L+AD + YT L+       E  +   
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +++ G +P    Y TLI  FC+  ++KE+ + F+  I  G+ P   TYT +I G  
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G    A++    M +    P+ +TY  +I+ LCK   + +A +  E M  +   P  +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 579 TRVTLAYEYCKQG--DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
           T   L    C +G  D A+ ++ L   D       + + N LI  LC E R+  A   + 
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            L+ K    DRV+   L N+  ++       +L ++I++
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 5/235 (2%)

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           +A N ++  L +    + A+   +K  + +   + ++ + LL  +++  +T  A G+   
Sbjct: 73  FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLAL 132

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+K G   +++ +  L+   CR  +  ++    +E     L P   +Y ++I G+     
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A++    M   GC+   +T+G LI   CK  K+DEA  F + M   G+    V   +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 583 LAYEYCKQG--DSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           L   +C  G  D   A+   +LE  D    I T NTLIR  C   ++  A+  F 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNTLIRGFCKLGQLKEASEIFE 306


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 10/391 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++   ++ +EM A G   DA++Y +++   C++GRV EA      M   G + D 
Sbjct: 135 CKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDY 194

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI A  +    G + +A EL  EM+ +G++P +     LI  LCK G  ++A  +
Sbjct: 195 VTFMTLIEALSN---HGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEI 251

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           +  +V        V  Y +++ GYCK  +++    LL +M E    P+  TY  L+ G  
Sbjct: 252 YQTVVAKKVATSRV-AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFS 310

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +    + A +L  L+   GC PN   Y  II GL    R++EA     +A       D I
Sbjct: 311 RANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVI 364

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +YT ++          +A  LF ++  AG +P++ AYT +I    +  ++++  K F++ 
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
             +   PT+ TYT +I G  +   +  A K F++M Q GC PD ITY  LI G  K SK+
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           DEA +  + M+ KG  P  VT  ++ + +CK
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 216/422 (51%), Gaps = 5/422 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+++G     +M+ +      +T   V+   C+  ++  A +VF++M  +G
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  + +  ++ EA + L  ML +G      T   ++  FC       I 
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM---IN 520

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E++ +M  +G +P ++  T L+     KG  E+A+++  ++  +    P+V  YT++
Sbjct: 521 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT-ARGCAPDVILYTSL 579

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I       ++  A  + + M E+G  P+  TY ++I    K+GN E A ++++LM K G 
Sbjct: 580 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 639

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +AYN+++DG  K  RV +A+ +  +     ++ + +T+ +L+    K  +T +A  
Sbjct: 640 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 699

Query: 459 LFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           LF  M+ K  + P + +YT LI    +  ++ E+   FQE I  G+ P   TYTS+I   
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSL 759

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A K  + M ++G  PD   Y ALI+GL   S +D A   ++ M+ +G +P E
Sbjct: 760 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 819

Query: 578 VT 579
           VT
Sbjct: 820 VT 821



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 239/517 (46%), Gaps = 31/517 (5%)

Query: 142 SLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTN-NGLP 185
           +L   G  + A+E+ Q +V+                + ++GR+ +G  ++++M   +  P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
            I  T N +V        ++ A E+F  + + G   +A++Y  ++       R+ EA   
Sbjct: 298 DI-QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA--- 353

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
             A  D    LD  + T +I    D      I +A EL E++   G  PNV  +T +IDG
Sbjct: 354 -KAFFDEA--LDVISYTTVIKGLADSK---RIDEACELFEKLKTAGCSPNVVAYTAVIDG 407

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L K G  E   + F  +  S +  P   TYT +I G CK + +  A  + E+M ++G +P
Sbjct: 408 LLKAGRIEDGLKNFEDMSGS-SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 466

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +T TYT+LI G  K    + A  L+D+M  +G  P    Y +I+ G CK   + EA E++
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +  +R  +     +T LLS +L +   ++A  +   M   G  PD+  YT+LI      
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++ E+   F   I  G  P   TY ++I  + + GN+ +A +  + M + G  PD   Y
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 646

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +L+ G  K  ++D+A   Y+ M+  GI P  VT   L +   K G +  A  + + + +
Sbjct: 647 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706

Query: 606 KLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           K  +     +   LI  L    RV  A   F +++ +
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 244/556 (43%), Gaps = 32/556 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y V    L   G  + A+E+ + M               + + +  G+L E   +  EM 
Sbjct: 162 YFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMI 221

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G        + ++   C+ G V+ A E++  + A+ V     +Y  ++  YC++GRV 
Sbjct: 222 ERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +  + L  M++     D  T  +L+  F        +  A EL + +   G KPN  T+T
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVAGFSRA---NRLDDALELFKLLSSYGCKPNAATYT 338

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            +I GL      E+A   F + +       +V +YT +I G    ++++ A  L E++K 
Sbjct: 339 TIIQGLYDAQRMEEAKAFFDEAL-------DVISYTTVIKGLADSKRIDEACELFEKLKT 391

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G  PN   YT++I G  K G  E      + M    C P    Y  +IDGLCK   + +
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A ++ ++  Q+    D ITYT L+    K ++  +A  L   M+  G  P    Y +++ 
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+   + E+++   +    G  P    +TS++  YL  G    A +    M   GCAP
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 571

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D I Y +LI  L    ++ EA   ++SMI KG +P  +T  T+   + K G+   A  IL
Sbjct: 572 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 631

Query: 601 ESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           E + K          N+L+      +RV  A   + +++      + V+   L +  ++ 
Sbjct: 632 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691

Query: 658 NK----YALFSDLSQR 669
            K    ++LF ++ ++
Sbjct: 692 GKTDRAFSLFKEMLEK 707



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 216/495 (43%), Gaps = 61/495 (12%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           ++E    + EM   GL       N V+   C+   ++ A E+F EM + G      SY  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG---------------F 273
           ++     + ++ EA ++ ++M+D G   D    T LI  FC  G               F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 274 R----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
           R                G +   F++LEEM+  G  P+   + VLID LCK G  ++A+ 
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LF ++ +S      V T+  +I       K++ A  L   M E+G  P      SLI+  
Sbjct: 181 LFERMRKSGCLGDYV-TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  + A ++   +  +    +  AYN+++DG CK GRV +  +LL +  + +   D 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY IL++   +      AL LF  +   G  P+   YTT+I      ++M+E++ FF E
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 498 AI-----------------------------TAGLFPTKETYTSMICGYLRDGNISSAVK 528
           A+                             TAG  P    YT++I G L+ G I   +K
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+ M+   C P   TY  +I GLCK   L +AC+ +E M+ KG  P  +T  TL   + 
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 479

Query: 589 KQGDSATAMIILESL 603
           K      A  +L+ +
Sbjct: 480 KASKMDEARKLLDVM 494



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 195/398 (48%), Gaps = 14/398 (3%)

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA   L  M   G + D     +++   C       I +A EL  EM   G +P + ++ 
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKAR---KIDKAIELFLEMPSMGCEPTIVSYN 59

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            +I GL      ++A++ F  ++  +  +P+V  +T +I G+CK  +     MLL +  +
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMI-DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK 118

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +   P+   YTS+I+G+CK G+ +  + +++ M   GC P+  AY  +ID LCK GRV E
Sbjct: 119 R-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           AYEL ++  +     D +T+  L+       +  +A  L+  M++ G  P +    +LI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           A C+  K+ E+ + +Q  +   +  ++  Y S++ GY + G +   +K   +M +    P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA---YEYCKQGDSATAM 597
           D  TY  L++G  + ++LD+A + ++ +   G  P   T  T+    Y+  ++ + A A 
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD-AQRMEEAKAF 356

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                 D+ L + +  T+I+ L   KR+  A   F KL
Sbjct: 357 -----FDEALDVISYTTVIKGLADSKRIDEACELFEKL 389



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 7/361 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F++  ++ E   ++  M   G      T   +V   C+L ++  A+EV  +M  RG
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
                  +  ++  Y   GR  EA + L+ M  RG   D     +L T+  D  F  G +
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD----VILYTSLIDLLFSTGRV 589

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  + + M+ KG  P+  T+  +I    K G  E A  + L+L+      P+   Y +
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI-LELMAKSGVGPDCFAYNS 648

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKE 396
           ++ GY K E++++A  + +RM   G+ PN  T+  L++G  K G  +RA+ L  +++ K+
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P + +Y  +IDGL K GRV EA+   ++   R +  +  TYT L+    K     +A
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L   MVK G+NPD+ AY+ LI        +  +   FQE +  G  P + TY  +  G
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828

Query: 517 Y 517
           +
Sbjct: 829 F 829



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 3/289 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++S +   GR +E + ++ EMT  G          ++ +    G V  A  VFD M
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G   DA +Y  ++  + ++G V  A   L  M   G   D      L+  +      
Sbjct: 600 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK---L 656

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + QAF + + MV  G KPN  T  VL+ GL K G T++AF LF +++  D   P + +
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVS 716

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G  K  +++ A    + M ++G++P  +TYTSLIY   K G    A  L++ M 
Sbjct: 717 YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 776

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           K G  P++ AY+A+I GL     V  A+++ ++  +R    +++TY +L
Sbjct: 777 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 129/281 (45%), Gaps = 4/281 (1%)

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M  A   L+ M   GL+P+      ++ G CK    ++A +L   M   GC P I +YN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I GL    ++ EAY+          + D I +T L+    K  + +    L  + +K  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD+  YT++I  +C+   +    K  +E + AG  P    Y  +I    + G +  A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F+RM + GC  D +T+  LI  L    KLDEAC+ Y  MI +G  P    + +L +  
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 588 CKQGDSATAMIILES-LDKKLWIRTV--NTLIRKLCSEKRV 625
           CK G    A  I ++ + KK+    V  N+L+   C   RV
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRV 280



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 4/185 (2%)

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++AL     M   GL PD+     ++   C+ +K+ ++ + F E  + G  PT  +Y ++
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G      +  A K+F  M   GC PD I +  LI G CK  +           + K  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRF 120

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKRVGMAAL 630
            P      ++ + YCK GD  T   ILE +     I        LI  LC   RV  A  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 631 FFHKL 635
            F ++
Sbjct: 181 LFERM 185


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 215/448 (47%), Gaps = 11/448 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++S   + G L++   ++ EM   G    P I  T N ++        +  A    ++M 
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIV-TYNTLINAFYRASRIREACAFREKMK 196

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A G+  D  +  ++V   C+ G V EA   L  M   G + D  T   +I A C     G
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC---VAG 253

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A E+L+ M      P++ T   L+DG CK G   +A  +  ++ R +N  P+V TY
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR-ENILPDVITY 309

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T +++G C+  ++  A  LLE +  QG +P+   YTSL+ G CK G  E A+ L+  M  
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC   +  Y++++ G C+ G V +A E+L +     +     TY I+L   +K     +
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ L   +V  G  PD+  Y TLI   C+  +++E+     E  + G FP   T  S++ 
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVF 489

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R G +  A      M++   AP+ + Y +LI GLCK  ++D+AC   ++M G+G++ 
Sbjct: 490 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVAL 549

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL 603
            +     L       G  A AM + + +
Sbjct: 550 DDFAYRKLIVSMSHGGRVAEAMAMYDEM 577



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 223/448 (49%), Gaps = 14/448 (3%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG--AILDNA 259
           G  + A ++F+ M +  V  +  +Y  ++   C+ G + +A   L  M+ +G  +  D  
Sbjct: 111 GNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIV 170

Query: 260 TLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           T   LI AF    +R S I++A    E+M   G  P+V T  +L+ G+CK G  E+A  +
Sbjct: 171 TYNTLINAF----YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L  ++     P+V TY ++I   C   K+  A  +L+ M      P+  T+ +L+ G C
Sbjct: 227 -LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFC 282

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G   RA ++++ M +E   P++  Y  +++GLC+ G+VQ A+ LL++  ++    D I
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            YT L+    K  E ++A  L   M   G    +  Y++L++ +CR   + ++ +   E 
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           ++  + P   TY  ++ G ++DG+IS AV     +   G  PD +TY  LI GLCK +++
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTL 615
            EAC   + M  +G  P +VT  ++ +  C+ G    A  ++  + +K     V    +L
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           I  LC   R+  A +    + G+   +D
Sbjct: 523 IDGLCKSDRMDDACMVLDAMRGQGVALD 550



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 191/424 (45%), Gaps = 38/424 (8%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           ++++  G  PN+ T  +LI G CK G   +A   FL+ +   +  P+V+ +  +I G  K
Sbjct: 51  KDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE-FLRALDEFSVAPDVYIFNVLIHGLFK 109

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNI 402
           +   ++A  L E M+   + P   TY ++I G CK GN E+A +L++ M ++G    P+I
Sbjct: 110 DGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDI 169

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN +I+   +  R++EA    +K     +  D +T  IL+S   K  + ++AL +   
Sbjct: 170 VTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDG 229

Query: 463 MVKAGLNPD-------IHA-------------------------YTTLIAAFCRQKKMKE 490
           M  AG  PD       IHA                         + TL+  FC+   +  
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPR 289

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +  +E     + P   TYT ++ G  R G +  A    + + + G  PD I Y +L+ 
Sbjct: 290 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 349

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKL 607
           GLCK  +++EA +  + M  +G     V   +L   YC+ G+   A  IL    S++   
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP 409

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLS 667
            + T N ++  L  +  +  A      L+ +    D V+   L +   ++N+     DL+
Sbjct: 410 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 469

Query: 668 QRIA 671
             +A
Sbjct: 470 DEMA 473



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 157/326 (48%), Gaps = 11/326 (3%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A + F      D YK +VH+Y  ++    K     R   + + +   G  PN  T+  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G+CK G   RA + +  + +    P++Y +N +I GL K G   +A +L +      ++
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN--PDIHAYTTLIAAFCRQKKMKESE 492
            + +TY  ++S   K    ++A  L   M++ G    PDI  Y TLI AF R  +++E+ 
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            F ++   AG+ P   T   ++ G  +DG++  A++    M   G  PD ITY ++I  L
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           C   K+ EA +  ++M     SP  VT  TL   +CK G    A+ +LE + ++  +  V
Sbjct: 250 CVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306

Query: 613 NT---LIRKLCSEKRVGMAALFFHKL 635
            T   L+  LC   RVG   + F+ L
Sbjct: 307 ITYTILVNGLC---RVGQVQVAFYLL 329


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 286/602 (47%), Gaps = 43/602 (7%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSS-PPRLNLQID--IDSLTHEQAITVVASLANEAGSMV 115
             LV+ +C ++         LRS+  P+L  ++   + SL   Q   V A L  +    V
Sbjct: 162 HPLVREICRLI--------ELRSAWNPKLEGELRHLLRSLKPRQ---VCAVLQLQTDERV 210

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           AL FFYWA    ++RH                +  R  E    ++ S++  G+L+    +
Sbjct: 211 ALRFFYWADRQWRYRH----------------DPIRRPEAFGYVMVSYSRAGKLRNAMRV 254

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           +  M   G+    S  N  + +      ++ A    + M    +  +  +Y  ++  YC 
Sbjct: 255 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCD 314

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKP 294
           + R+ +A   ++ M  +G   D  +   ++   C +     IK+   L+E+M++     P
Sbjct: 315 LHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEK---RIKEVRLLMEKMLKDSNLLP 371

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +  T+   +  L K G  ++A   FL+      ++ +   Y+A++  +C+E +M++A+ +
Sbjct: 372 DQVTYNTFVHMLSKHGHGDEALE-FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 430

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +  M  +G +P+  TYTS+I G C+    ++A  ++  M K GC PN  +Y A+++GLCK
Sbjct: 431 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 490

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G   EA E++  + +     + ITY++L+    ++ ++ +A  L   M+K G  P    
Sbjct: 491 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 550

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
              LI + C+++K+ E+++F ++ +  G       +T++I G+ +  ++ +A+     M 
Sbjct: 551 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 610

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                PD +TY  +I  L K+ +++EA +    M+  G+ P  VT  T+ ++YC+ G   
Sbjct: 611 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 670

Query: 595 TAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             + +LE +  +   RT  N +I KLCS   +  A    +KLLGK   V R +     N 
Sbjct: 671 DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA----YKLLGK---VLRTASKIDANT 723

Query: 654 CY 655
           C+
Sbjct: 724 CH 725



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 47/382 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V SF   GR+ +   +V EM + G      T   V+   C+   V+ A+++  +M   G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
              +  SY  ++   C+ G   EA   ++   +   I +  T ++L+      GFR  G 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM-----HGFRREGK 528

Query: 277 IKQAFELLEEMVRKGWKP-----------------------------------NVYTHTV 301
             +A +L+ EM++KG+ P                                   NV   T 
Sbjct: 529 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTT 588

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I G C+K   E A  L   +  S N  P+V TYT +I    K+ ++  A  L  +M   
Sbjct: 589 VIHGFCQKDDLEAALSLLDDMYLS-NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 647

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           GL+P   TY ++I+ +C++G  E    L++ ++ ++ C     AYN +I+ LC  G +++
Sbjct: 648 GLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQ 704

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           AY+LL K  +   + D  T  +L+  +L +     +  + CRM    L PD+     +  
Sbjct: 705 AYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSK 764

Query: 481 AFCRQKKMKESEKFFQEAITAG 502
               + K +E++K     +  G
Sbjct: 765 KLMLEGKSEEADKLILRFVERG 786


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 249/519 (47%), Gaps = 43/519 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S    G+L +  SM+ +M N  LP    T N ++    + G  + A  + D+M   G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y +M+   C++ R   A   L  M +     D  +   LI  F  +G    I 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG---KIN 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +  +M+R+  KP+V T+T LIDG C+ G T++A R+  ++ +    +P+  TY+A+
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM-QITGVRPSELTYSAL 410

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GYCK  K+  A  L++ ++ + +  N   YT LI G C++G   +A  ++  M  +G 
Sbjct: 411 LNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGI 470

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y+A+I+G+CK G + E  E+L +  +  +  + + YT L+    K    K+AL 
Sbjct: 471 DPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 530

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  + ++GL  +   +  L+ +F R+  + E+E+F Q      +     ++  +I  Y 
Sbjct: 531 YFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 590

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC------------------------- 553
           + GN+  A   +  M + G  PD  TYG+L+ GLC                         
Sbjct: 591 QRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK 650

Query: 554 ----------KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE-S 602
                     K   LDEA    E M+ + I P   T   L   +CK+G    A+I+L+  
Sbjct: 651 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 710

Query: 603 LDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L+K L   T+    L+  L +E +V  A+  F +++ K+
Sbjct: 711 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 749



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 259/559 (46%), Gaps = 74/559 (13%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEM 179
           +Y +        G   +A ++++CM               ++   ++G + E   ++  M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
             +G+         +V   C+ G  + A + F ++   G+ A++  +  ++ ++ R G +
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            EA+++   M       D A+   +I ++C    RG++ +AF + + MVR GW P++ T+
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQ---RGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 300 TVLIDGLC-----------------------------------KKGWTEKAFRLFLKLVR 324
             L+ GLC                                   K G  ++A  L  K+V 
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV- 676

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           + N  P+ +TYT ++ G+CK  K+  A +LL+ M E+GL+P+T  YT L+ G    G  +
Sbjct: 677 TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 736

Query: 385 RA-YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            A Y   +++ KEG   +  AYN++++G  K G++ E   L++   + E+     +Y IL
Sbjct: 737 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  ++K+ +  + L L+  MVK G+ PD   Y  LI   C    ++ + KF ++ +  G+
Sbjct: 797 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYF----------------QRMNQIGCAPDNITYGA 547
           FP    +  +I  +     +S+A++ F                + M  +G  P  +   +
Sbjct: 857 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESS 916

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ---GDSATAMIILESLD 604
           ++ GLCK  K++EA   + S++  G+ P   T  TL +  CK+    D+     ++ES  
Sbjct: 917 IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976

Query: 605 KKLWIRTVNTLIRKLCSEK 623
            K+ + T N LI  LC++K
Sbjct: 977 LKVDVVTYNVLITGLCNKK 995



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 19/443 (4%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             C++ S+ + G + E FS+   M  +G P    T   ++   C+ G +  A+E    +  
Sbjct: 583  NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642

Query: 217  RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            +    D  +   ++V  C+ G + EA      M+ R  + D  T T+L+  FC    RG 
Sbjct: 643  KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK---RGK 699

Query: 277  IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +  A  LL+ M+ KG  P+   +T L++GL  +G  + A  +F +++  +    +   Y 
Sbjct: 700  VVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 759

Query: 337  AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +M++GY K  ++N  E L+  M E  + P++ +Y  L++G+ K G   R   L   M KE
Sbjct: 760  SMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 819

Query: 397  GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            G  P+   Y  +I GLC+ G ++ A + L+K     +  D + + IL+    ++++   A
Sbjct: 820  GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNA 879

Query: 457  LGLFCRM---------------VKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            L LF  M               +KA G+ P   A ++++   C+  K++E+   F   + 
Sbjct: 880  LQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMR 939

Query: 501  AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            AG+ PT  T+T+++ G  ++  I  A    Q M   G   D +TY  LI+GLC +  + +
Sbjct: 940  AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD 999

Query: 561  ACQFYESMIGKGISPCEVTRVTL 583
            A   YE M  KG+ P   T +TL
Sbjct: 1000 ALDLYEEMKSKGLLPNITTYITL 1022



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 228/467 (48%), Gaps = 12/467 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E  +   PL  +T N V+   C  G +  AE +  +M       +A +Y  ++  Y + G
Sbjct: 220 ESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKG 278

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R   A R L  M   G   D  T  ++I   C K  R +  +A+ LL+ M      P+  
Sbjct: 279 RCKSALRILDDMEKNGIEADLYTYNIMIDKLC-KLKRSA--RAYLLLKRMREVNLTPDEC 335

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           ++  LI G   +G    A  +F +++R  + KP+V TYTA+I GYC+  + + A  +L  
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQ-SLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  G+ P+  TY++L+ G+CK      A DL+  +     + N   Y  +IDG C+ G 
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V +A ++LK      +  D ITY+ L++   K     +   +  RM K+G+ P+   YTT
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+  FC+    KE+ K+F +   +GL      + +++C + R+G I+ A ++ Q M+++ 
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA- 596
            + D  ++  +I   C++  + EA   Y++M+  G  P   T  +L    C+ G    A 
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 597 --MIILESLDKKLWI--RTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
             M+ L  L+K   I  +T+NTL+  +C    +  A     K++ ++
Sbjct: 635 EFMVYL--LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 679



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 209/487 (42%), Gaps = 66/487 (13%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRVT 240
           +GL  IT      V I  +  +   A  V   +   G  C+   S  L  ++ C    + 
Sbjct: 102 SGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLF 161

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDK-GFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             D  ++A +  G +LD A        F D+ GF+ S+     +L  +V  G   + Y  
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIF----FMDECGFKASLFSCNNILNALV--GINKSEYV- 214

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                      W      LFLK      +  +V T   +++  C + K+++AE +L++MK
Sbjct: 215 -----------W------LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK 257

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               LPN  TY +++  + K G  + A  ++D M K G   ++Y YN +ID LCK  R  
Sbjct: 258 -NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            AY LLK+  +  L  D+ +Y  L+     + +   A+ +F +M++  L P +  YT LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD------------------- 520
             +CR  +  E+ +   E    G+ P++ TY++++ GY +                    
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS 436

Query: 521 ----------------GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
                           G +S A +  + M   G  PD ITY ALI+G+CK   + E  + 
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK--LCSE 622
              M   G+ P  V   TL + +CK G +  A+     + +   +   N++I    LCS 
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV--ANSVIHNALLCSF 554

Query: 623 KRVGMAA 629
            R GM A
Sbjct: 555 YREGMIA 561



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 169/365 (46%), Gaps = 21/365 (5%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM-CAR 217
            ++  F + G++     ++  M   GL   T     ++      G V+ A  +F E+ C  
Sbjct: 690  LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 749

Query: 218  GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            G+ AD  +Y  M+  Y + G++ E +R +  M +      +A+  +L+  +  KG    +
Sbjct: 750  GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG---QL 806

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             +   L  +MV++G KP+  T+ +LI GLC+ G  E A +   K+V    +  N+  +  
Sbjct: 807  SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL-AFDI 865

Query: 338  MISGYCKEEKMNRAEMLL----------------ERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +I  + ++ KM+ A  L                 E MK  G++P+    +S++ G CK G
Sbjct: 866  LIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 925

Query: 382  NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
              E A  +   + + G  P I  +  ++ GLCK+ ++ +A+ L +      L+ D +TY 
Sbjct: 926  KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 985

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            +L++    +     AL L+  M   GL P+I  Y TL  A      M++ EK  ++    
Sbjct: 986  VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045

Query: 502  GLFPT 506
            G+ P+
Sbjct: 1046 GIVPS 1050


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 206/437 (47%), Gaps = 7/437 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+  D  +  +++  +  + RV  A    S M+  G   D  T   LI   C  G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                 QA E  ++    G +P VYT+T +I+GLCK G T  A  LF K+  +   +PNV
Sbjct: 180 ---KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA-GCQPNV 235

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I   CK++ +N A  +   MK + + P+  TY SLI G C    ++ A  L++ 
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      PNI+ +N ++D +CK+G+V EA  + K   +  ++ D +TY+ L+  +  + E
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF  M+  G  PD  +Y  LI  +C+ K++ E+++ F E I  GL P    Y +
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G +  A   F+ M+  G  PD  TY  L+ G CK+  L +A + +  M    
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKRVGMAA 629
           + P       L    CK G+   A  +   L  +  +  V    T+I  LC E  +  A 
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535

Query: 630 LFFHKLLGKDQNVDRVS 646
             F  + G     D  S
Sbjct: 536 EAFRNMEGDGCPPDEFS 552



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 214/452 (47%), Gaps = 7/452 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++  F+ + R+   FS+  +M   GL     T N ++   C++G    A E FD+  
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A G      +Y  ++   C++G  T A      M + G   +  T  +LI + C      
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKL-- 250

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + +A ++   M  K   P+++T+  LI GLC  + W E +    L  + S N  PN+ T
Sbjct: 251 -VNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS--ALLNEMTSLNIMPNIFT 307

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++   CKE K++ A+ + + M E G+ P+  TY+SL+YG+        A  L D M 
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC P+ ++YN +I G CK  R+ EA +L  +   + L  D + Y  L+    +    +
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF  M   G  PD+  Y+ L+  FC++  + ++ + F+   +  L P    Y  +I
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + GN+  A K F  +   G  P+   Y  +I+ LCK+  LDEA + + +M G G  
Sbjct: 488 DAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCP 547

Query: 575 PCEVTRVTLAYEYCKQGD-SATAMIILESLDK 605
           P E +   +   + +  D S  A +I E  D+
Sbjct: 548 PDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 193/416 (46%), Gaps = 18/416 (4%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-FRGSIKQA 280
           DASS++           + +A    + ML R  +      T L++A    G + G++   
Sbjct: 68  DASSFR----------NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAV--- 114

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L ++M   G  P++YT ++LID        + AF +F K+++    +P+  T+  +I+
Sbjct: 115 ISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL-GLQPDAVTFNTLIN 173

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G CK  K  +A    +  +  G  P   TYT++I G CK+G    A  L   M + GC P
Sbjct: 174 GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQP 233

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  YN +ID LCK   V EA ++      + +  D  TY  L+         K+A  L 
Sbjct: 234 NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALL 293

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M    + P+I  +  L+ A C++ K+ E++  F+     G+ P   TY+S++ GY   
Sbjct: 294 NEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             I  A K F  M   GC PD  +Y  LI G CK  ++DEA Q +  MI +G++P  V  
Sbjct: 354 MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNY 413

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFH 633
            TL +  C+ G    A  + +++     +    T + L+   C E  +G A   F 
Sbjct: 414 NTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR 469



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 4/322 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C     + A  + +EM +  +  +  ++ ++V A C+ G+V+EA      M
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            + G   D  T + L+  +     R  I +A +L + M+ KG KP+ +++ +LI G CK 
Sbjct: 332 TEMGVEPDVVTYSSLMYGY---SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              ++A +LF +++       NV+ Y  +I G C+  ++  A+ L + M   G LP+  T
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVN-YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+ G CK G   +A+ L  +M      P+I  YN +ID +CK G +++A +L  + F
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELF 507

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + L  +   YT +++   K+    +AL  F  M   G  PD  +Y  +I  F + K   
Sbjct: 508 VQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDES 567

Query: 490 ESEKFFQEAITAGLFPTKETYT 511
            + +   E    G      T T
Sbjct: 568 RAAQLIGEMRDRGFVAEAGTTT 589



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 46/104 (44%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G LK+   +  E+   GL         ++   C+ GL++ A E F  M   G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
              D  SY +++  + +    + A + +  M DRG + +  T T
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 190/364 (52%), Gaps = 41/364 (11%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           A +Y  ++   C+  R +EA   L  M+  G I D  T T LIT FC          A  
Sbjct: 54  AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK---KSDDALR 110

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + E++V +G++P+V T++ LIDGLCK+G  ++A  LF ++++S +  PN  TY ++ISG+
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+  KM+ A  LLERM E G  P+  TYT+L+ G CK+   + AYDL++ M ++G TPN+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             + +++DGLC++ R+ +A  +L +                                   
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGE----------------------------------- 255

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M +   +P ++ Y T++  +CR  +++E+ KF  E +     P   ++  MI G  +   
Sbjct: 256 MRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNR 313

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GISPCEVTRV 581
            S A++  +   +  C PD + Y  +I  LC++ K+DEAC+ Y  M+ + G  P  +T  
Sbjct: 314 SSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373

Query: 582 TLAY 585
           T  Y
Sbjct: 374 TFDY 377



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 162/312 (51%), Gaps = 8/312 (2%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P   TY ++ISG CK E+ + A  LLE M   G +P+  TYT+LI G CK    + A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHL 448
            + +   G  P++  Y+ +IDGLCK+GR++EA +L  +  +      + +TY  L+S   
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +  +  +A+ L  RM + G +PD+  YTTL+  FC+  ++ ++     +    GL P   
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+TS++ G  R+  +S AV     M +  C+P   TY  ++ G C+ ++L+EA +F   M
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF---M 288

Query: 569 IGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKR 624
           + +   P  V    +     CK   S+ AM ++E   ++     V    T+I  LC EK+
Sbjct: 289 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 625 VGMAALFFHKLL 636
           V  A   + K+L
Sbjct: 349 VDEACRVYRKML 360



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 171/325 (52%), Gaps = 8/325 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+      A ++ +EM   G   D  +Y  ++  +C+  +  +A R    +
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNVYTHTVLIDGLCK 308
           + RG   D  T + LI   C +   G +K+A +L   M++ G   PN  T+  LI G C+
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKE---GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  ++A  L  ++  + +  P+V TYT +++G+CK  +++ A  LL +M  +GL PN  
Sbjct: 173 MGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+TSL+ G C+      A  ++  M ++ C+P +Y YN I+DG C+  +++EA + + + 
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE- 290

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            + +   + +++ I++    K   + +A+ L     +   NPD+  YTT+I   CR+KK+
Sbjct: 291 -EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 489 KESEKFFQEAI-TAGLFPTKETYTS 512
            E+ + +++ +   G  P   TY++
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYST 374



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 168/323 (52%), Gaps = 10/323 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++S   +  R  E + ++ EM  +G +P I +    + G  C+    + A  VF+++ AR
Sbjct: 60  LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF-CKSKKSDDALRVFEQLVAR 118

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGS 276
           G   D  +Y  ++   C+ GR+ EA      M+  G+ + N  T   LI+ FC     G 
Sbjct: 119 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM---GK 175

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  LLE M   G  P+V T+T L++G CK    + A+ L  ++ R     PNV T+T
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK-GLTPNVVTFT 234

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +++ G C+E +++ A  +L  M+ +   P   TY +++ G+C+V   E A   M  + + 
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEM 292

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C PN+ ++N +I GLCK  R  EA EL+++A +R    D + YT ++    ++ +  +A
Sbjct: 293 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEA 352

Query: 457 LGLFCRMV-KAGLNPDIHAYTTL 478
             ++ +M+ + G  P+   Y+T 
Sbjct: 353 CRVYRKMLEEPGCLPNSITYSTF 375



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P   TY SLI G CK      AYDL++ M   GC P+I+ Y  +I G CK  +  +A  
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAF 482
           + ++   R  + D +TY+ L+    K+   K+A+ LF RM+K+G   P+   Y +LI+ F
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR  KM E+    +     G  P   TYT+++ G+ +   +  A     +M + G  P+ 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILE 601
           +T+ +L+ GLC++++L +A      M  K  SP   T  T+   YC+      A   +LE
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 602 SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            +D    + + N +IR LC   R   A     +   +  N D V
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLI-TSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           C++    + GRLKE   +   M  +G  +  T T N ++   C +G ++ A  + + M  
Sbjct: 129 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 188

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   D  +Y  ++  +C++ R+ +A   L+ M  +G   +  T T L+   C +     
Sbjct: 189 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRE---NR 245

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +L EM RK   P VYT+  ++DG C+    E+A +  L+ +   +  PNV ++ 
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFN 302

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            MI G CK  + + A  L+E  + +   P+   YT++I   C+    + A  +   M +E
Sbjct: 303 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362

Query: 397 -GCTPNIYAYN 406
            GC PN   Y+
Sbjct: 363 PGCLPNSITYS 373


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C++  +E A +V + M ARG   D  +Y +M+ + C   ++  A + L  +L 
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
              +    T T+LI A       G I +A +LLEEM+ +G  P++YT+  +I G+CK+G 
Sbjct: 201 DNCMPTVITYTILIEATI---VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E+A  L   L  S   KP+V +Y  ++  +  + K +  E L+  M  +G  PN  TY+
Sbjct: 258 VERAAELITSLT-SKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  + A  ++ +M ++  TP+ Y+Y+ +I  LCK+GR+  A  ++      
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + Y  +L+   K     QAL +F ++   G  P++ +Y T+I+A         +
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                  I+ G+ P + TY S+I    RDG +  A+     M Q G  P  I+Y  ++ G
Sbjct: 437 LGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           LCK  ++D+A   +  MI KG  P E T + L       G    AM +  SL
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 198/378 (52%), Gaps = 7/378 (1%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I+ FC       I+ A ++L  M  +G+ P++ T+ ++I  LC +     A ++  +L+
Sbjct: 143 VISGFCKVN---RIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             DN  P V TYT +I     E  +N A  LLE M  +GLLP+  TY ++I G CK G  
Sbjct: 200 L-DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ERA +L+  +  +GC P++ +YN ++     +G+  E  +L+ + F R  + +K+TY+IL
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   +     +A+ +   M++  L PD ++Y  LI+A C++ ++  +       I+ G 
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y +++    ++GN + A++ F ++  +GC P+  +Y  +IS L        A  
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
              +MI KG+ P E+T  +L    C+ G    A+ +L+ +++  +  TV   N ++  LC
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498

Query: 621 SEKRVGMAALFFHKLLGK 638
             +R+  A   F +++ K
Sbjct: 499 KVRRIDDAIGMFAEMIEK 516



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 4/221 (1%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           LL+   K  +  ++L     +V  G  PD+   T LI  F   K ++++ +   E + + 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    Y ++I G+ +   I +A +   RM   G  PD +TY  +I  LC + KL  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
           +  + ++     P  +T   L      +G    AM +LE +  +  +    T N +IR +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
           C E  V  AA     L  K    D +S   L  A     K+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKW 293


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 221/480 (46%), Gaps = 39/480 (8%)

Query: 139 CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
           C    +S+  +   + V   ++  +  IG +     +  +M +NG+   + T N ++   
Sbjct: 288 CILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGY 347

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   +E+AE + +EM   G   +  ++  ++   C   R   A  ++  ML R    ++
Sbjct: 348 CKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPND 407

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             LTLL++  C  G +    +A EL   ++ KG+  N  T   LI GLC+ G  E+A +L
Sbjct: 408 GLLTLLVSGLCQNGKQ---SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             +++       ++ +Y  +I   CKE K+     L E M  +G+ P+  TY  L++G C
Sbjct: 465 LKEMLERGLVLDSI-SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC 523

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            +G  E A  L     K G  P+ Y Y  +IDG CK  RV+E  +L ++    +++ + +
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAV 583

Query: 439 TYTILLSEHLKQAETKQAL-----------------------------------GLFCRM 463
            Y  L+  + +    ++A                                     L   M
Sbjct: 584 VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEM 643

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K GL+P++  YT LI  +C+  +M + +   QE     + P K TYT MI G+ + GN+
Sbjct: 644 RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNM 703

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A K    M Q G  PD +TY AL +G CK+ K++EA +  + M   GIS  ++T  TL
Sbjct: 704 KAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL 763



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 193/378 (51%), Gaps = 4/378 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           NF+    ++  +VS   + G+  E   +   +   G    T T N ++   CE G  E A
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            ++  EM  RG+  D+ SY  +++A C+ G+V E  +    M+ RG   D  T  +L+  
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C+    G I++A  L  E  + G  P+ YT+ ++IDG CK    E+  +LF ++V +  
Sbjct: 522 LCN---MGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV-TMK 577

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            + N   Y  +I  YC+   M  A  L + M+ +G+   + TY+SLI+G   +G  + A 
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+D M KEG +PN+  Y A+I G CK G++ +   +L++     +  +KITYTI+++ H
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K    K A  L   M + G+ PD   Y  L   FC++ KM+E+ K      T G+    
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 508 ETYTSMICGYLRDGNISS 525
            TYT++I G+ +   +SS
Sbjct: 758 ITYTTLIDGWHKPLTVSS 775



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 234/502 (46%), Gaps = 15/502 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GRL E F    +M    +     T   ++    +L   + A  +  EM  RG
Sbjct: 238 IIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRG 297

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +   Y  ++  YCR+G ++ A +    M+  G   ++ T   LI  +C       ++
Sbjct: 298 YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSN---QME 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LLEEM+  G   N  T T +I  LC K   + A  LF+  +   N+KPN    T +
Sbjct: 355 HAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL-LFIMEMLLRNFKPNDGLLTLL 413

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG C+  K + A  L  R+ E+G   NT T  +LI+G C+ G+ E A  L+  M + G 
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +  +YN +I   CK+G+V+E ++L ++  +R +Q D  TY +LL       + ++A G
Sbjct: 474 VLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGG 533

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+    K G  PD + Y  +I  +C+  +++E EK FQE +T  +      Y ++I  Y 
Sbjct: 534 LWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYC 593

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +GN+  A +    M   G    + TY +LI GL     +D A Q  + M  +G+SP  V
Sbjct: 594 ENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVV 653

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN-------TLIRKLCSEKRVGMAALF 631
               L   YCK G     M  ++S+ +++ I  V+        +I   C    +  AA  
Sbjct: 654 CYTALIGGYCKLGQ----MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKL 709

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
            +++  K    D V+  AL N 
Sbjct: 710 LNEMAQKGIVPDAVTYNALTNG 731



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 203/457 (44%), Gaps = 37/457 (8%)

Query: 172 GFSMVIEM----TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           GF +V E+     N GL     T N ++    +   V+ + +VFD MC  GV  D   + 
Sbjct: 142 GFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFS 201

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG--------------- 272
            MV A+C  GRV +A      M   G   +  T   +I   C  G               
Sbjct: 202 TMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKE 261

Query: 273 ------------FRGSIK-----QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
                         G +K     +A  +L+EM  +G+ PN   +  LIDG C+ G    A
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            ++   ++ S+   PN  T  ++I GYCK  +M  AE LLE M   G + N  T+TS+I+
Sbjct: 322 LQIRDDMI-SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIH 380

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
             C    F+ A   +  M      PN      ++ GLC+ G+  EA EL  +  ++   A
Sbjct: 381 RLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           + +T   L+    +    ++A  L   M++ GL  D  +Y TLI A C++ K++E  K  
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           +E +  G+ P   TY  ++ G    G I  A   +    + G  PD  TYG +I G CK 
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           ++++E  + ++ M+   I    V   TL   YC+ G+
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGN 597



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 172/349 (49%), Gaps = 4/349 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            FEL   +  KG  P++ T   L+  L K    + ++++F  ++      P+V+ ++ M+
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVF-DIMCHCGVTPDVYLFSTMV 204

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           + +C   +++ A  L  +M++ G+ PN  TY ++I+G CK G  + A+   + M KE   
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVK 264

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y  +I+GL K  R  EA  +LK+   R    + + Y  L+  + +      AL +
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+  G++P+     +LI  +C+  +M+ +E   +E +T G    + T+TS+I     
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
                SA+ +   M      P++     L+SGLC+  K  EA + +  ++ KG +   VT
Sbjct: 385 KCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVT 444

Query: 580 RVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRV 625
              L +  C+ G    A  +L E L++ L + ++  NTLI   C E +V
Sbjct: 445 SNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 38/286 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L   +  +GL P+  T   L+    K    + +Y + D+M   G TP++Y ++ +++  C
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GRV +A EL                                   F +M K G+ P++ 
Sbjct: 209 TGGRVDDAIEL-----------------------------------FRKMEKVGVAPNVV 233

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y  +I   C+  ++ E+ +F ++     + P+  TY  +I G ++      A    + M
Sbjct: 234 TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
           +  G AP+N+ Y  LI G C+   +  A Q  + MI  GISP  VT  +L   YCK    
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353

Query: 594 ATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLL 636
             A  +LE +     +    T  ++I +LC + R   A LF  ++L
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 200/406 (49%), Gaps = 42/406 (10%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR---MGRVTEADRW 245
           +T N  +   C+ G +  AE+V +++ A G   +  +Y  ++  +C+    G++  AD  
Sbjct: 201 TTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAI 260

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L  ML      +  T   LI  FC      + K AFE   EM R+G KPN+ T+  LI+G
Sbjct: 261 LKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFE---EMQRQGLKPNIVTYNSLING 317

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L   G  ++A  L+ K+V     KPN+ T+ A+I+G+CK++ +  A  L + + EQ L+P
Sbjct: 318 LSNNGKLDEAIALWDKMV-GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVP 376

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N  T+ ++I   CK G  E  + L + M  EG  PN+  YN +I GLC+   V+ A +LL
Sbjct: 377 NAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLL 436

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +    EL+AD +TY I                                   LI  +C+ 
Sbjct: 437 NEMENYELKADVVTYNI-----------------------------------LIGGWCKD 461

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            +  ++EK   E +  G+ P   TY +++ GY  +GN+ +A+K   +M + G   + +TY
Sbjct: 462 GEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTY 521

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             LI G CK  KL++A +    M+ KG++P   T   +  E  ++G
Sbjct: 522 NVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 192/407 (47%), Gaps = 6/407 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  A EVF  +   G     +S   ++ A  +     E       M+ R    +  T  +
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL--FLK 321
            I   C  G    + +A +++E++   G+ PN+ T+  LIDG CKKG   K +R    LK
Sbjct: 206 FINGLCKAG---KLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            + ++   PN  T+  +I G+CK+E +  A+   E M+ QGL PN  TY SLI G    G
Sbjct: 263 EMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A  L D M   G  PNI  +NA+I+G CKK  ++EA +L     +++L  + IT+ 
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++    K    ++   L   M+  G+ P++  Y  LIA  CR + ++ ++K   E    
Sbjct: 383 TMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENY 442

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            L     TY  +I G+ +DG  S A K    M  +G  P+++TY  L+ G C +  L  A
Sbjct: 443 ELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAA 502

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL 607
            +    M  +G     VT   L   +CK G    A  +L E L+K L
Sbjct: 503 LKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  +  G+L E  ++  +M   GL     T N ++   C+  +++ A ++FD++  + 
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A ++  M+ A+C+ G + E     ++MLD G   + +T   LI   C      +++
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR---NQNVR 430

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL EM     K +V T+ +LI G CK G   KA +L  +++     KPN  TY  +
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV-GVKPNHVTYNTL 489

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC E  +  A  +  +M+++G   N  TY  LI G CK G  E A  L++ M ++G 
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549

Query: 399 TPNIYAYNAIIDGLCKKGRVQE 420
            PN   Y+ +   + +KG + +
Sbjct: 550 NPNRTTYDVVRLEMLEKGFIPD 571



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 14/247 (5%)

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           A+ +   +L+  ++   E   A  +F R+   G    +++   L++A  +  +  E +  
Sbjct: 128 ANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYV 187

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           ++E I   + P   T+   I G  + G ++ A    + +   G +P+ +TY  LI G CK
Sbjct: 188 YKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCK 247

Query: 555 Q---SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
           +    K+  A    + M+   I P E+T  TL   +CK  +   A    E + +   K  
Sbjct: 248 KGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA------CYESNKYAL 662
           I T N+LI  L +  ++  A   + K++G     + V+  AL N         E+ K  L
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK--L 365

Query: 663 FSDLSQR 669
           F D++++
Sbjct: 366 FDDIAEQ 372



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 4/171 (2%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
            S++  G F        C+++       ++    ++ EM N  L     T N ++G  C+
Sbjct: 402 NSMLDEGIFPNV-STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCK 460

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    AE++  EM   GV  +  +Y  ++  YC  G +  A +  + M   G   +  T
Sbjct: 461 DGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVT 520

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             +LI  FC     G ++ A  LL EM+ KG  PN  T+ V+   + +KG+
Sbjct: 521 YNVLIKGFCK---TGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGF 568


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 186/377 (49%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE+G ++   EV  +M   G+  +   Y  ++   C+ G +    +    M +   + + 
Sbjct: 162 CEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQ 221

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI  F   G +   K   EL E+M   G  PNVYT+  +I   C  G    AF L
Sbjct: 222 YTYTVLINGFFKMGLK---KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFEL 278

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R      NV TY  +I G C+E ++  AE L+ RMK  GL PN  +Y +LI G+C
Sbjct: 279 FDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 337

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            +GN ++A  L + M   G +P++  YN +I G  +        +++++   R L   K+
Sbjct: 338 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL+   ++    ++A  ++  M KAGL  DI+ Y  LI   C    MKE+ K F+  
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P    Y +MI GY ++G+   A++  + M + G  P+  +Y + I  LCK  K 
Sbjct: 458 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKW 517

Query: 559 DEACQFYESMIGKGISP 575
            EA    + MI  G+ P
Sbjct: 518 TEAEVLLKDMIELGLKP 534



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 212/429 (49%), Gaps = 10/429 (2%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCD 270
           ++M  RG+   ++++  +++   +     +A R  +    +G + LD  +  ++I   C+
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKGNVKLDVYSFGIMIKGCCE 163

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G+   + + FE+L +M   G  PNV  +T LIDG CK G  E+  +LF K+   D    
Sbjct: 164 VGY---LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELD-VVA 219

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N +TYT +I+G+ K         L E+MK  G++PN  TY S+I   C  G    A++L 
Sbjct: 220 NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M + G   N+  YN +I GLC++ RV EA  L+ +  +  L  + I+Y  L+  +   
Sbjct: 280 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI 339

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A  LF +M  +G +P +  Y  LIA F   K         +E    GL P+K TY
Sbjct: 340 GNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 399

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T ++   +R  NI  A + +  M + G   D   YG LI GLC    + EA + ++S+  
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGM 627
             + P +V   T+ Y YCK+G S  A+ +L+ + +   +  V   N+ I  LC +++   
Sbjct: 460 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTE 519

Query: 628 AALFFHKLL 636
           A +    ++
Sbjct: 520 AEVLLKDMI 528



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 39/383 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    E+G L +GF ++ +M   GL         ++   C+ G +E  +++F +M    
Sbjct: 157 MIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELD 216

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  +Y +++  + +MG   +       M   G + +  T   +I   C+    G + 
Sbjct: 217 VVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND---GKLN 273

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AFEL +EM  +G   NV T+  LI GLC++    +A RL  ++ R D   PN+ +Y  +
Sbjct: 274 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR-DGLSPNLISYNTL 332

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH--------------------- 377
           I GYC    +++A  L  +MK  G  P+  TY  LI G                      
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 392

Query: 378 --------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                          +  N E+A+ +   M K G   +IY Y  +I GLC  G ++EA +
Sbjct: 393 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 452

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L K   +  L+ + + Y  ++  + K+  + +AL L   M + G+ P++ +Y + I   C
Sbjct: 453 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILC 512

Query: 484 RQKKMKESEKFFQEAITAGLFPT 506
           + +K  E+E   ++ I  GL P+
Sbjct: 513 KDEKWTEAEVLLKDMIELGLKPS 535



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 34/315 (10%)

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL------------ 373
           D++  +V  + A+I+ + + +   +A     +M  +GL+P +NT+ +L            
Sbjct: 76  DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135

Query: 374 ----------------------IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
                                 I G C+VG  ++ ++++  M + G +PN+  Y  +IDG
Sbjct: 136 AWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 195

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK G ++   +L  K  + ++ A++ TYT+L++   K    K  + L+ +M   G+ P+
Sbjct: 196 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 255

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ Y ++I   C   K+  + + F E    G+     TY ++I G  ++  +  A +   
Sbjct: 256 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 315

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           RM + G +P+ I+Y  LI G C    LD+A   +  M   G SP   T   L   + +  
Sbjct: 316 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 375

Query: 592 DSATAMIILESLDKK 606
           +SA    ++  ++ +
Sbjct: 376 NSAGVTDMVREMEAR 390


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 266/571 (46%), Gaps = 29/571 (5%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRH-----FMRLYIVCATS----------LISNG 147
           V A L ++    VAL FFYWA    ++RH     +  L ++  T           L+   
Sbjct: 180 VCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRR 239

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
              R  E    ++ S++  G+L++   ++  M   G+       N  + +      +E A
Sbjct: 240 GIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 299

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
               + M   G+  +  +Y  M+  YC + RV EA   L  M  +G + D  +   ++  
Sbjct: 300 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGY 359

Query: 268 FCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            C +     I +  +L+++M ++ G   +  T+  LI  L K    ++A   FLK     
Sbjct: 360 LCKEK---RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEAL-WFLKDAEEK 415

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFER 385
            ++ +   Y+A++   CKE +M+ A+ L+  M  +G   P+  TYT+++ G C++G  ++
Sbjct: 416 GFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 475

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L+ +M   G  PN  +Y A+++GLC+ G+  EA E++  + ++    + ITY++L+ 
Sbjct: 476 AKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMH 535

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K+ +  +A  +   MV  G  P       L+ + CR  +  E+ KF +E +  G   
Sbjct: 536 GLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 595

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               +T++I G+ ++  + +A+     M  I    D  TY  L+  L K+ ++ EA +  
Sbjct: 596 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELM 655

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKR 624
           + M+ KGI P  VT  T+ + YC+       + ILE +  +   +T+ N +I KLC   +
Sbjct: 656 KKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGK 715

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           +  A     KLLGK   V R +  +    CY
Sbjct: 716 LEEA----DKLLGK---VLRTASRSDAKTCY 739



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 154/350 (44%), Gaps = 42/350 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V +  + GR+ E   ++ EM + G  P    T   VV   C LG V+ A+++   M   
Sbjct: 427 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTH 486

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--G 275
           G   +  SY  ++   CR G+  EA   ++   ++    ++ T ++L+      G R  G
Sbjct: 487 GYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLM-----HGLRKEG 541

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A +++ EMV KG+ P      +L+  LC+ G T +A R F++   +     NV  +
Sbjct: 542 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEECLNKGCAINVVNF 600

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T +I G+C+ ++++ A  +L+ M       +  TYT+L+    K G    A +LM  M  
Sbjct: 601 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLH 660

Query: 396 EGCTPNIYAY---------------------------------NAIIDGLCKKGRVQEAY 422
           +G  P    Y                                 N +I+ LC  G+++EA 
Sbjct: 661 KGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEAD 720

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           +LL K  +   ++D  T   L+  +LK      A  + CRM    L PD+
Sbjct: 721 KLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDV 770



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 4/241 (1%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           Q   + D + Y  +L    K    + A  +   M + G+     A+  ++ ++ R  +++
Sbjct: 203 QWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLR 262

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++ K       AG+ P      + I  ++R   +  A+++ +RM  +G  P+ +TY  +I
Sbjct: 263 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 322

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
            G C   +++EA +  + M  KG  P +V+  T+    CK+        +++ + K+  +
Sbjct: 323 RGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 382

Query: 610 R----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSD 665
                T NTLI  L        A  F      K   +D+V  +A+ +A  +  + +   D
Sbjct: 383 VRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKD 442

Query: 666 L 666
           L
Sbjct: 443 L 443


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 205/421 (48%), Gaps = 5/421 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           + T  G+ +   T + ++   C+ G VE AEE+  +    G+ AD   Y   V  YCR+G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +A   +  M   G   ++ T   LI  FCD      + +A E +++M  KG  P+V 
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCD---MKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LIDG  K    ++ F++ L+ +     KPNV +Y ++I+  CK+ K+  AE++L  
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQI-LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G+LPN   Y  LI G C VG  + A    D M +   +P +  YN +IDGLCKKG+
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA + L +        D ITY  L+S +       + LGL+  M   G+ P +  Y  
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI+  C ++ ++  EK + E +   L P +  Y +MI  Y   GN   A    Q M   G
Sbjct: 637 LISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD +TY +LI G  ++ KL        +M  K ++P   T   L   +C   D + A 
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAY 755

Query: 598 I 598
           +
Sbjct: 756 V 756



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 251/519 (48%), Gaps = 17/519 (3%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I N  F     +    + +  ++  LK G   +  M   G+       N ++G  C    
Sbjct: 167 IENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKR 226

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  AE++FDEMC   +     +Y  ++  YC++G +  A +    M ++    +  T   
Sbjct: 227 IRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNS 286

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL--- 320
           L++  C       +K+A  LL+EM   G+ P+ YT+++L DGL +      A  L+    
Sbjct: 287 LLSGLCK---MRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343

Query: 321 -KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            K +R +NY     T + +++G CK+ K+ +AE +L++  E GL+ +   Y + + G+C+
Sbjct: 344 EKGIRINNY-----TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +G+  +A   ++ M   G  PN   +N++ID  C    + +A E +KK  ++ +     T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+  + K     +   +  +M + G+ P++ +Y +LI   C+  K+ E+E   ++ I
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+ P  + Y  +I G    G +  A+++F  M +   +P  +TY  LI GLCK+ KL 
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLI 616
           EA  F   +   G SP  +T  +L   Y   G+ +  + + E++     K  +RT + LI
Sbjct: 579 EAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
              CS++ + +    ++++L  +   DRV   A+ + CY
Sbjct: 639 SG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIH-CY 675



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 225/465 (48%), Gaps = 42/465 (9%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+++   M  EM N  L     T N ++   C++G ++ A ++ + M  + V  +  ++ 
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF--CDKGFRGSIKQAFELLE 285
            ++   C+M ++ EA   L  M   G + D  T ++L      CD G       A EL E
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG-----NGAMELYE 340

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----------------------- 322
           +   KG + N YT ++L++GLCK+G  EKA  +  K                        
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 323 -----------VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                      + S   +PN  T+ ++I  +C  ++M++AE  +++M E+G+ P+  TY 
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G+ K+  F+R + +++ M + G  PN+ +Y ++I+ LCK G++ EA  +L+    R
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  +   Y +L+       + K AL  F  M+++ ++P +  Y  LI   C++ K+ E+
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           E F  +  ++G  P   TY S+I GY   GN+S  +  ++ M  +G  P   TY  LISG
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG 640

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            C +  ++   + Y  M+   + P  V    + + Y + G++  A
Sbjct: 641 -CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 221/445 (49%), Gaps = 7/445 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++F E+   G   D   Y   + A  ++  +     +L +M  RG   +     +LI   
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +     I+ A ++ +EM       ++ T+  LIDG CK G  + AF++  ++ +  + 
Sbjct: 222 CREK---RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM-KEKSV 277

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN+ T+ +++SG CK  KM  A  LL+ M+  G +P+  TY+ L  G  +  +   A +
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAME 337

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L +   ++G   N Y  + +++GLCK+G+V++A E+LKK  +  L AD++ Y   ++ + 
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +  +  +A+    RM   GL P+   + +LI  FC  K+M ++E++ ++    G+ P+ E
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY ++I GY +        +  ++M +IG  P+ ++YG+LI+ LCK  K+ EA      M
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRV 625
           I +G+ P       L    C  G    A+   + +   +    + T N LI  LC + ++
Sbjct: 518 ICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKL 577

Query: 626 GMAALFFHKLLGKDQNVDRVSLAAL 650
             A  F  ++     + D ++  +L
Sbjct: 578 TEAEDFLTQITSSGHSPDVITYNSL 602



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 183/361 (50%), Gaps = 4/361 (1%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  +L  E+   G++ + + +   I    K    +     FL  +R    +PNV  Y  +
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGME-FLDSMRKRGVRPNVFIYNVL 217

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C+E+++  AE + + M    L+ +  TY +LI G+CKVG  + A+ + + M ++  
Sbjct: 218 IGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  +N+++ GLCK  +++EA  LLK+        D  TY+IL    L+  +   A+ 
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAME 337

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+ +  + G+  + +  + L+   C+Q K++++E+  ++    GL   +  Y + + GY 
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G+++ A+   +RM   G  P++IT+ +LI   C   ++D+A ++ + M  KG++P   
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  TL   Y K         ILE +++   K  + +  +LI  LC + ++  A +    +
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517

Query: 636 L 636
           +
Sbjct: 518 I 518



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 200/451 (44%), Gaps = 20/451 (4%)

Query: 138 VCATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNN 182
           +    L   G  E+A E+++                 V+ +  IG + +    +  M + 
Sbjct: 356 ILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF 415

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           GL   + T N ++   C++  ++ AEE   +M  +GV     +Y  ++  Y ++      
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRC 475

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            + L  M + G   +  +   LI   C  G    I +A  +L +M+ +G  PN   + +L
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDG---KILEAEIVLRDMICRGVLPNAQVYNML 532

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG C  G  + A R F +++RS+   P + TY  +I G CK+ K+  AE  L ++   G
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSE-ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY SLI G+   GN  +   L + M   G  P +  Y+ +I G  K+G ++   
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVE 650

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L  +  Q  L  D++ Y  ++  + +   T++A  L   M+  G++PD   Y +LI   
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            R+ K+   +          L P  +TY  ++ G+    + S A  +++ M +    P+ 
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNA 770

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGI 573
                L +GL ++ +L E       M  KGI
Sbjct: 771 SICNELTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 174/392 (44%), Gaps = 41/392 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F ++  + +    V +M   G+     T N ++    +L   +   ++ ++M   G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  SY  ++   C+ G++ EA+  L  M+ RG + +     +LI   C     G +K
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSC---MVGKVK 543

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A    +EM+R    P + T+ VLIDGLCKKG   +A   FL  + S  + P+V TY ++
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA-EDFLTQITSSGHSPDVITYNSL 602

Query: 339 ISGY----------------------------------CKEEKMNRAEMLLERMKEQGLL 364
           ISGY                                  C +E +   E L   M +  LL
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLL 662

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y ++I+ + ++GN ++AY L   M  +G  P+   YN++I G  ++G++    +L
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           +     +EL     TY IL+  H    +   A   +  MV+    P+      L A   +
Sbjct: 723 VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQ 782

Query: 485 QKKMKESEKFFQEAITAGL---FPTKETYTSM 513
           + +++E +    E    G+   +P+KE  +++
Sbjct: 783 EGRLQEVQVICSEMNVKGIINHWPSKEEISAV 814


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 207/430 (48%), Gaps = 23/430 (5%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G ++ A  +   M       D  +Y  ++   C  GR   A   L  ML 
Sbjct: 124 NAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDMLR 180

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG + D  T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G 
Sbjct: 181 RGCVPDVVTYTILLEATCK---RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A   FLK + S   +PN  +Y  ++ G C  E+   AE L+  M  +G  PN  T+ 
Sbjct: 238 VDDAME-FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A +++D + K GCTPN  +YN I+   CK+ ++  A   ++     
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D ++Y  LL+   +  E   A+ L  ++   G  P + +Y T+I    +  K +E+
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEA 416

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E +T GL P   TY+++  G  R+G I  A+K F ++  +G  P+ + Y A++ G
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK+     A   +  M+  G  P E                +T  I++E L  +  ++ 
Sbjct: 477 LCKRRATHSAIDLFTYMVSNGCMPNE----------------STYTILIEGLAYEGLVKE 520

Query: 612 VNTLIRKLCS 621
              ++ +LCS
Sbjct: 521 AREMMAELCS 530



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 244/540 (45%), Gaps = 28/540 (5%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRL-----NLQIDIDSLTH 97
           S  P F+S+   PS P          +  +Y       + P R       L++ +     
Sbjct: 13  SALPTFASSHPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDL 72

Query: 98  EQAITVVASLA----NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAH 153
           E+AI +V S+A    + AG   AL     A G  +     R+   C   ++S        
Sbjct: 73  EEAIRLVESMAGLEPSAAGPCAALIKKLCASG--RTAEARRVLASCEPDVMS-------- 122

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
                MV+ +   G+L     +V  M    +   T T N ++   C  G  + A  V D+
Sbjct: 123 --YNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  RG   D  +Y +++ A C+     +A + L  M D+G   D  T  +++   C +G 
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEG- 236

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +  A E L+ +   G +PN  ++ +++ GLC     E A +L  ++ R     PNV 
Sbjct: 237 --RVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR-PPNVV 293

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+  +IS  C+   +  A  +L+++ + G  PN+ +Y  +++  CK    +RA   ++LM
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              GC P+I +YN ++  LC+ G V  A ELL +   +      I+Y  ++    K  +T
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++AL L   MV  GL PDI  Y+T+ +  CR+ +++E+ K F +    G+ P    Y ++
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G  +     SA+  F  M   GC P+  TY  LI GL  +  + EA +    +  +G+
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 205/415 (49%), Gaps = 23/415 (5%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC-----ARGVCADASSYKLMVVAYCRM 236
           N +P  ++  N  + +    G +E A  + + M      A G CA       ++   C  
Sbjct: 50  NAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCA------ALIKKLCAS 103

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           GR  EA R L++        D  +   ++  +C     G +  A  L+  M     +P+ 
Sbjct: 104 GRTAEARRVLASCEP-----DVMSYNAMVAGYC---VTGQLDNARRLVAAM---PMEPDT 152

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           YT+  LI GLC +G T+ A  +   ++R     P+V TYT ++   CK     +A  LL+
Sbjct: 153 YTYNTLIRGLCGRGRTDNALAVLDDMLRR-GCVPDVVTYTILLEATCKRSGYKQAVKLLD 211

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M+++G  P+  TY  ++ G C+ G  + A + +  +   GC PN  +YN ++ GLC   
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R ++A +L+ +  ++    + +T+ +L+S   ++   + A+ +  ++ K G  P+  +Y 
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            ++ AFC+QKKM  +  F +  +++G +P   +Y +++    R G + +AV+   ++   
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           GC P  I+Y  +I GL K  K +EA +    M+ KG+ P  +T  T++   C++G
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 44/366 (12%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTH-TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           RG +++A  L+E M   G +P+       LI  LC  G T +A R+        + +P+V
Sbjct: 69  RGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLA------SCEPDV 120

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y AM++GYC   +++ A  L+  M  +   P+T TY +LI G C  G  + A  ++D 
Sbjct: 121 MSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + GC P++  Y  +++  CK+   ++A +LL +   +    D +TY ++++   ++  
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+     +   G  P+  +Y  ++   C  ++ +++EK   E    G  P   T+  
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I    R G +  A++   ++ + GC P++++Y  ++   CKQ K+D A  F E M+  G
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             P                                 I + NTL+  LC    V  A    
Sbjct: 358 CYP--------------------------------DIVSYNTLLTALCRGGEVDAAVELL 385

Query: 633 HKLLGK 638
           H+L  K
Sbjct: 386 HQLKDK 391



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 66/266 (24%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R ++   ++ EM+  G P    T N ++   C  GLVE A E+ D++   G   ++ SY 
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----------------DK 271
            ++ A+C+  ++  A  ++  M+  G   D  +   L+TA C                DK
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391

Query: 272 GFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           G                  G  ++A ELL EMV KG +P++ T++ +  GLC++G  E+A
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451

Query: 316 FRLFLKL----------------------------------VRSDNYKPNVHTYTAMISG 341
            + F K+                                  + S+   PN  TYT +I G
Sbjct: 452 IKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNT 367
              E  +  A  ++  +  +G++  T
Sbjct: 512 LAYEGLVKEAREMMAELCSRGVVSKT 537


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 230/477 (48%), Gaps = 29/477 (6%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
           GF   +E+  NG+     T+  ++   C    + +A  V       G   D  ++  +V 
Sbjct: 91  GFCKGMEL--NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +C  GRV+EA   +  M++     D  T++ LI   C    +G + +A  L++ MV  G
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC---LKGRVSEALVLIDRMVEYG 205

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           ++P+  T+  +++ LCK G +  A  LF K+    N K +V  Y+ +I   CK+   + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDA 264

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L   M+ +G+  +  TY+SLI G C  G ++    ++  M      P++  ++A+ID 
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
             K+G++ EA EL  +   R +  D ITY  L+    K+    +A  +F  MV  G  PD
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           I  Y+ LI ++C+ K++ +  + F+E  + GL P   TY +++ G+ + G +++A + FQ
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM------IGKGI------SPCEVT 579
            M   G  P  +TYG L+ GLC   +L++A + +E M      +G GI        C  +
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504

Query: 580 RVTLAYE-YCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +V  A+  +C   D             K  + T N +I  LC +  +  A + F K+
Sbjct: 505 KVDDAWSLFCSLSDKGV----------KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 212/432 (49%), Gaps = 7/432 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  +  +M+  YCR  ++  A   L      G   D  T + L+  FC     G +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC---LEGRV 156

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV    +P++ T + LI+GLC KG   +A  L  ++V    ++P+  TY  
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGP 215

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++  CK      A  L  +M+E+ +  +   Y+ +I   CK G+F+ A  L + M  +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              ++  Y+++I GLC  G+  +  ++L++   R +  D +T++ L+   +K+ +  +A 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+  G+ PD   Y +LI  FC++  + E+ + F   ++ G  P   TY+ +I  Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +   ++ F+ ++  G  P+ ITY  L+ G C+  KL+ A + ++ M+ +G+ P  
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT   L    C  G+   A+ I E + K    L I   N +I  +C+  +V  A   F  
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 635 LLGKDQNVDRVS 646
           L  K    D V+
Sbjct: 516 LSDKGVKPDVVT 527



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 5/368 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C+ G  + A  +F+EM  +G+ AD  +Y  ++   C  G+  +  + L  M+ R 
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            I D  T + LI  F  +G    + +A EL  EM+ +G  P+  T+  LIDG CK+    
Sbjct: 311 IIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++F  L+ S   +P++ TY+ +I+ YCK ++++    L   +  +GL+PNT TY +L
Sbjct: 368 EANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G C+ G    A +L   M   G  P++  Y  ++DGLC  G + +A E+ +K  +  +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                 Y I++      ++   A  LFC +   G+ PD+  Y  +I   C++  + E++ 
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F++    G  P   TY  +I  +L    + S+V+  + M   G + D+ T   +I  L 
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606

Query: 554 KQSKLDEA 561
            + +LD++
Sbjct: 607 DR-RLDKS 613



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 4/355 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G + ++YT T++I+  C+K     AF +  +  +   Y+P+  T++ +++G+C E 
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEG 154

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  L++RM E    P+  T ++LI G C  G    A  L+D M + G  P+   Y 
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++ LCK G    A +L +K  +R ++A  + Y+I++    K      AL LF  M   
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+  D+  Y++LI   C   K  +  K  +E I   + P   T++++I  ++++G +  A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            + +  M   G APD ITY +LI G CK++ L EA Q ++ M+ KG  P  VT   L   
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           YCK       M +   +  K  I    T NTL+   C   ++  A   F +++ +
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 210/469 (44%), Gaps = 40/469 (8%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           NG  E     M  M++ +    +L   FS++      G    T T + +V   C  G V 
Sbjct: 99  NG-IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A  + D M       D  +   ++   C  GRV+EA   +  M++ G   D  T   ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G   +   A +L  +M  +  K +V  ++++ID LCK G  + A  LF ++   
Sbjct: 218 NRLCKSG---NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EM 273

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              K +V TY+++I G C + K +    +L  M  + ++P+  T+++LI    K G    
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   YN++IDG CK+  + EA ++      +  + D +TY+IL++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       + LF  +   GL P+   Y TL+  FC+  K+  +++ FQE ++ G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQI----------------------------- 536
           +  TY  ++ G   +G ++ A++ F++M +                              
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513

Query: 537 ------GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
                 G  PD +TY  +I GLCK+  L EA   +  M   G +P + T
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 4/402 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   ++  M   G      T   V+   C+ G    A ++F +M  R + A    Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ + C+ G   +A    + M  +G   D  T + LI   C+ G         ++L E
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG---KWDDGAKMLRE 305

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +   P+V T + LID   K+G   +A  L+ +++ +    P+  TY ++I G+CKE 
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKEN 364

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  + + M  +G  P+  TY+ LI  +CK    +    L   +  +G  PN   YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G++  A EL ++   R +    +TY ILL       E  +AL +F +M K+
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            +   I  Y  +I   C   K+ ++   F      G+ P   TY  MI G  + G++S A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
              F++M + GC PD+ TY  LI      S L  + +  E M
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 19/351 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +   SL  +G+F+ A  +   M               +      G+  +G  M+ EM 
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
              +     T + ++ +  + G +  A+E+++EM  RG+  D  +Y  ++  +C+   + 
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA++    M+ +G   D  T ++LI ++C K  R  +     L  E+  KG  PN  T+ 
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYC-KAKR--VDDGMRLFREISSKGLIPNTITYN 424

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            L+ G C+ G    A  LF ++V S    P+V TY  ++ G C   ++N+A  + E+M++
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             +      Y  +I+G C     + A+ L   +  +G  P++  YN +I GLCKKG + E
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           A  L +K  +     D  TY IL+  HL  +    ++ L   M   G + D
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+N A  L E M +   LP    +  L     +   ++        M   G   ++Y   
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C+K ++  A+ +L +A++   + D IT++ L++    +    +A+ L  RMV+ 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
              PD+   +TLI   C + ++ E+       +  G  P + TY  ++    + GN + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +  F++M +       + Y  +I  LCK    D+A   +  M  KGI    VT  +L   
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 587 YCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G     A ++ E + + +   + T + LI     E ++  A   +++++ +    D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 644 RVSLAAL------KNACYESNK 659
            ++  +L      +N  +E+N+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQ 371



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+ ++   F+  I +   PT   +  +     R       + + + M   G   D  T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 547 ALISGLCKQSKLDEACQFYESMIGK----GISPCEVTRVTLAYEYCKQGDSATAMIILE- 601
            +I+  C++ KL     F  S++G+    G  P  +T  TL   +C +G  + A+ +++ 
Sbjct: 110 IMINCYCRKKKL----LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165

Query: 602 --SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              + ++  + TV+TLI  LC + RV  A +   +++      D V+   + N   +S  
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225

Query: 660 YALFSDLSQRIAE 672
            AL  DL +++ E
Sbjct: 226 SALALDLFRKMEE 238


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 210/407 (51%), Gaps = 7/407 (1%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  SY +++  +CR  ++  A   L  M+  G   D  TL+ L+  +C       I  A 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK---RISDAV 170

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            L+++MV  G+KP+  T   LI GL       +A  L  ++V+    +P++ TY A+++G
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGAVVNG 229

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK   ++ A  LL++M++  +  +   Y ++I G CK  + + A+ L + M  +G  P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           ++ YN++I  LC  GR  +A  LL    +R++  + +T++ L+   +K+ +  +A  L+ 
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+K  ++PDI  Y++LI  FC   ++ E++  F+  I+   FP   TY ++I G+ +  
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  G+ P  +T  
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
            L    CK G    A+++ E L K      I T N +I  +C   +V
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 208/394 (52%), Gaps = 4/394 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +    S++ +M    +       N ++   C+   ++ A  +F++M  +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C  GR ++A R LS M++R    +  T + LI AF  +G    + 
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG---KLV 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   P+++T++ LI+G C     ++A  +F  ++  D + PNV TY  +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 401

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M ++GL+ NT TY +LI G  + G+ + A  +   M  +G 
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLCK G++++A  + +   + +++ D  TY I++    K  + +    
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YTT+I+ FCR+   +E++  F+E    G  P    Y ++I   L
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           RDG+ +++ +  + M   G   D  T   +I+ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 208/449 (46%), Gaps = 6/449 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ +  ++V +M   G    T T N ++           A  + D+M 
Sbjct: 153 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMV 212

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR 274
            RG   D  +Y  +V   C+ G +  A   L  M ++G I  D      +I   C     
Sbjct: 213 QRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK---Y 268

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  AF L  +M  KG +P+V+T+  LI  LC  G    A RL   ++      PNV T
Sbjct: 269 KHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER-KINPNVVT 327

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +LM 
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            + C PN+  YN +I G CK  RV+E  EL ++  QR L  + +TY  L+    +  +  
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +MV  G+ PDI  Y+ L+   C+  K++++   F+    + + P   TY  MI
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  + G +      F  ++  G  P+ I Y  +ISG C++   +EA   +  M   G  
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
           P      TL     + GD A +  +++ +
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++Y++ +LI+  C++     A  +  K+++   Y+P++ T +++++GYC  ++++ A  L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVAL 172

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +++M E G  P+T T+ +LI+G         A  L+D M + GC P++  Y A+++GLCK
Sbjct: 173 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCK 232

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G +  A  LLKK  + +++AD + Y  ++    K      A  LF +M   G+ PD+  
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI+  C   +  ++ +     I   + P   T++++I  ++++G +  A K +  M 
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +    PD  TY +LI+G C   +LDEA   +E MI K   P  VT  TL   +CK     
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             M +   + ++  +    T NTLI+ L       MA   F K++      D ++ + L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 5/264 (1%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P+I  +N ++  + K  +      L ++     +  D  +Y IL++   ++++   AL +
Sbjct: 78  PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M+K G  PDI   ++L+  +C  K++ ++     + +  G  P   T+ ++I G   
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
               S AV    +M Q GC PD +TYGA+++GLCK+  +D A    + M    I    V 
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKL 635
             T+    CK      A  +   ++ K  IR    T N+LI  LC+  R   A+     +
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETK-GIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 636 LGKDQNVDRVSLAALKNACYESNK 659
           + +  N + V+ +AL +A  +  K
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGK 340


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 230/477 (48%), Gaps = 29/477 (6%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
           GF   +E+  NG+     T+  ++   C    + +A  V       G   D  ++  +V 
Sbjct: 120 GFCKGMEL--NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 177

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +C  GRV+EA   +  M++     D  T++ LI   C    +G + +A  L++ MV  G
Sbjct: 178 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC---LKGRVSEALVLIDRMVEYG 234

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           ++P+  T+  +++ LCK G +  A  LF K+    N K +V  Y+ +I   CK+   + A
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDA 293

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L   M+ +G+  +  TY+SLI G C  G ++    ++  M      P++  ++A+ID 
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 353

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
             K+G++ EA EL  +   R +  D ITY  L+    K+    +A  +F  MV  G  PD
Sbjct: 354 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 413

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           I  Y+ LI ++C+ K++ +  + F+E  + GL P   TY +++ G+ + G +++A + FQ
Sbjct: 414 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 473

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM------IGKGI------SPCEVT 579
            M   G  P  +TYG L+ GLC   +L++A + +E M      +G GI        C  +
Sbjct: 474 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 533

Query: 580 RVTLAYE-YCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +V  A+  +C   D             K  + T N +I  LC +  +  A + F K+
Sbjct: 534 KVDDAWSLFCSLSDKGV----------KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 580



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 212/432 (49%), Gaps = 7/432 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  +  +M+  YCR  ++  A   L      G   D  T + L+  FC     G +
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC---LEGRV 185

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV    +P++ T + LI+GLC KG   +A  L  ++V    ++P+  TY  
Sbjct: 186 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGP 244

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++  CK      A  L  +M+E+ +  +   Y+ +I   CK G+F+ A  L + M  +G
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              ++  Y+++I GLC  G+  +  ++L++   R +  D +T++ L+   +K+ +  +A 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+  G+ PD   Y +LI  FC++  + E+ + F   ++ G  P   TY+ +I  Y
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +   ++ F+ ++  G  P+ ITY  L+ G C+  KL+ A + ++ M+ +G+ P  
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT   L    C  G+   A+ I E + K    L I   N +I  +C+  +V  A   F  
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 635 LLGKDQNVDRVS 646
           L  K    D V+
Sbjct: 545 LSDKGVKPDVVT 556



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 5/368 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C+ G  + A  +F+EM  +G+ AD  +Y  ++   C  G+  +  + L  M+ R 
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            I D  T + LI  F  +G    + +A EL  EM+ +G  P+  T+  LIDG CK+    
Sbjct: 340 IIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++F  L+ S   +P++ TY+ +I+ YCK ++++    L   +  +GL+PNT TY +L
Sbjct: 397 EANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G C+ G    A +L   M   G  P++  Y  ++DGLC  G + +A E+ +K  +  +
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                 Y I++      ++   A  LFC +   G+ PD+  Y  +I   C++  + E++ 
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F++    G  P   TY  +I  +L    + S+V+  + M   G + D+ T   +I  L 
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635

Query: 554 KQSKLDEA 561
            + +LD++
Sbjct: 636 DR-RLDKS 642



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 4/355 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G + ++YT T++I+  C+K     AF +  +  +   Y+P+  T++ +++G+C E 
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEG 183

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  L++RM E    P+  T ++LI G C  G    A  L+D M + G  P+   Y 
Sbjct: 184 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++ LCK G    A +L +K  +R ++A  + Y+I++    K      AL LF  M   
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+  D+  Y++LI   C   K  +  K  +E I   + P   T++++I  ++++G +  A
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            + +  M   G APD ITY +LI G CK++ L EA Q ++ M+ KG  P  VT   L   
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           YCK       M +   +  K  I    T NTL+   C   ++  A   F +++ +
Sbjct: 424 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 478



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 210/469 (44%), Gaps = 40/469 (8%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           NG  E     M  M++ +    +L   FS++      G    T T + +V   C  G V 
Sbjct: 128 NG-IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 186

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A  + D M       D  +   ++   C  GRV+EA   +  M++ G   D  T   ++
Sbjct: 187 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 246

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G   +   A +L  +M  +  K +V  ++++ID LCK G  + A  LF ++   
Sbjct: 247 NRLCKSG---NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EM 302

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              K +V TY+++I G C + K +    +L  M  + ++P+  T+++LI    K G    
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   YN++IDG CK+  + EA ++      +  + D +TY+IL++
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       + LF  +   GL P+   Y TL+  FC+  K+  +++ FQE ++ G+ P
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQI----------------------------- 536
           +  TY  ++ G   +G ++ A++ F++M +                              
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542

Query: 537 ------GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
                 G  PD +TY  +I GLCK+  L EA   +  M   G +P + T
Sbjct: 543 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 591



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 4/402 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   ++  M   G      T   V+   C+ G    A ++F +M  R + A    Y
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 277

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ + C+ G   +A    + M  +G   D  T + LI   C+ G         ++L E
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG---KWDDGAKMLRE 334

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +   P+V T + LID   K+G   +A  L+ +++ +    P+  TY ++I G+CKE 
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKEN 393

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  + + M  +G  P+  TY+ LI  +CK    +    L   +  +G  PN   YN
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G++  A EL ++   R +    +TY ILL       E  +AL +F +M K+
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            +   I  Y  +I   C   K+ ++   F      G+ P   TY  MI G  + G++S A
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
              F++M + GC PD+ TY  LI      S L  + +  E M
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 19/351 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +   SL  +G+F+ A  +   M               +      G+  +G  M+ EM 
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
              +     T + ++ +  + G +  A+E+++EM  RG+  D  +Y  ++  +C+   + 
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA++    M+ +G   D  T ++LI ++C K  R  +     L  E+  KG  PN  T+ 
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYC-KAKR--VDDGMRLFREISSKGLIPNTITYN 453

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            L+ G C+ G    A  LF ++V S    P+V TY  ++ G C   ++N+A  + E+M++
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             +      Y  +I+G C     + A+ L   +  +G  P++  YN +I GLCKKG + E
Sbjct: 513 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 572

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           A  L +K  +     D  TY IL+  HL  +    ++ L   M   G + D
Sbjct: 573 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+N A  L E M +   LP    +  L     +   ++        M   G   ++Y   
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C+K ++  A+ +L +A++   + D IT++ L++    +    +A+ L  RMV+ 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
              PD+   +TLI   C + ++ E+       +  G  P + TY  ++    + GN + A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +  F++M +       + Y  +I  LCK    D+A   +  M  KGI    VT  +L   
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 587 YCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G     A ++ E + + +   + T + LI     E ++  A   +++++ +    D
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 644 RVSLAAL------KNACYESNK 659
            ++  +L      +N  +E+N+
Sbjct: 379 TITYNSLIDGFCKENCLHEANQ 400



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+ ++   F+  I +   PT   +  +     R       + + + M   G   D  T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 547 ALISGLCKQSKLDEACQFYESMIGK----GISPCEVTRVTLAYEYCKQGDSATAMIILE- 601
            +I+  C++ KL     F  S++G+    G  P  +T  TL   +C +G  + A+ +++ 
Sbjct: 139 IMINCYCRKKKL----LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194

Query: 602 --SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              + ++  + TV+TLI  LC + RV  A +   +++      D V+   + N   +S  
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254

Query: 660 YALFSDLSQRIAE 672
            AL  DL +++ E
Sbjct: 255 SALALDLFRKMEE 267


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 211/446 (47%), Gaps = 12/446 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R KE   ++ EMT+N       T N +V   C+ GLV+ A EV D M   G  AD  +Y 
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYS 430

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C +GRV +A   LS +   G   D    T ++   C        ++A EL+ EM
Sbjct: 431 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTE---QWERAEELMAEM 487

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +     P+  T   ++  LC+KG  ++A R+  ++   +   P++ TY  +I G C E  
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM-SENGCSPDIVTYNCIIDGLCNESC 546

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  LL  ++  G  P+  T+ +L+ G C V  +E A  LM  M +  C P+   +N 
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNT 606

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I  LC+KG + +A E LK   +     +  TY+I++   LK  + + AL L   M    
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG- 665

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD+  Y T+I+   +  KM+E+    +  ++ GL P   TY S+  G  R+     AV
Sbjct: 666 -TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL--AY 585
           +  +R+   G +PD   Y  ++ G C+  + D A   +  M+  G  P E T V L  A 
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784

Query: 586 EYCKQGDSATAMII----LESLDKKL 607
            Y    D A  ++     L  LDKKL
Sbjct: 785 AYGGLLDEAKRLLASLCSLGVLDKKL 810



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 219/466 (46%), Gaps = 19/466 (4%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNG----LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           S  + G + E   +   M + G     P++    N ++   C  G V  AE VF    A 
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVPC--NILIKRLCSDGRVSDAERVF---AAL 213

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G  A   +Y  MV  YCR GR+ +A R ++ M       D  T   LI A C    RG I
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALC---VRGRI 267

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  + ++M+ +G  P+V T+++L+D  CK+    +A  L L  +R+   +P++ TY  
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL-LDEMRAKGCEPDIVTYNV 326

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+  C E  ++ A  +L  +   G  P+  TYT ++   C    ++   +L+  M    
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P+   +N I+  LC++G V  A E++    +    AD +TY+ +L           A+
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  R+   G  PD  AYTT++   C  ++ + +E+   E + +   P + T+ +++   
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A++  ++M++ GC+PD +TY  +I GLC +S +D+A +    +   G  P  
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566

Query: 578 VTRVTLAYEYC---KQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           VT  TL    C   +  D+   M  +   +      T NT+I  LC
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 221/465 (47%), Gaps = 14/465 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLI--TSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           MV+ +   GR+++   ++     NG+P    T T N ++   C  G +  A  VFD+M  
Sbjct: 225 MVNGYCRAGRIEDARRLI-----NGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y +++ A C+     +A   L  M  +G   D  T  +LI A C++G    
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG---D 336

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLC-KKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           + +A  +L  +   G KP+  T+T ++  LC  + W E      L  + S+N  P+  T+
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE--VEELLAEMTSNNCAPDEVTF 394

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +++  C++  ++RA  +++ M E G + +  TY+S++ G C VG  + A +L+  +  
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC P+  AY  ++ GLC   + + A EL+ +    +   D++T+  +++   ++    +
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ +  +M + G +PDI  Y  +I   C +  + ++ +   +  + G  P   T+ +++ 
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLK 574

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G         A +    M +  C PD +T+  +I+ LC++  L +A +  + M   G  P
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTVNTLIRKL 619
              T   +     K G +  A+ +L  + +    + T NT+I  L
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNL 679



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 6/269 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++        + +   ++ ++ + G      T N ++   C +   E AE++   M  
Sbjct: 535 NCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR 594

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                D  ++  ++ + C+ G +T+A   L  M + G + +++T ++++ A       G 
Sbjct: 595 SNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKA---GK 651

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            + A ELL  M      P++ T+  +I  L K G  E+A  L L+++ S+   P+  TY 
Sbjct: 652 AQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDL-LRVMVSNGLCPDTTTYR 708

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++  G C+E+  +RA  +L R+++ GL P+T  Y  ++ G C+    + A D    M   
Sbjct: 709 SLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS 768

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           GC P+   Y  +++ L   G + EA  LL
Sbjct: 769 GCMPDESTYVILLEALAYGGLLDEAKRLL 797



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 8/157 (5%)

Query: 521 GNISSAVKYFQRMNQIG---CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           G I  A+  F  M   G   C P  +    LI  LC   ++ +A + + ++   G S   
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPP-VVPCNILIKRLCSDGRVSDAERVFAAL---GPSATV 219

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT  T+   YC+ G    A  ++  +       T N LIR LC   R+  A   F  +L 
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 638 KDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
           +  +   V+ + L +A C ES      + L +  A+G
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG 316


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 194/361 (53%), Gaps = 4/361 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +++  +C +G+++ +   L  +L  G   +  TLT L+   C   
Sbjct: 77  QMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLC--- 133

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G ++++    +++V +G++ N  ++  L++GLCK G T  A + FL+++   +   NV
Sbjct: 134 LKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIK-FLRMIEDSSTGLNV 192

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I G CK++ +N A      M  +G+ PN  TYT+LI G C  G    A+ L++ 
Sbjct: 193 VMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNE 252

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +   PN+Y Y  +ID LCK+G+V+EA  LL +   R   AD +TYT LL    K   
Sbjct: 253 MILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQN 312

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF +M + G+ P+ + YT LI   C+  ++K+++K FQ+ +  G      TY  
Sbjct: 313 LDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNV 372

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           MI G  ++G +  A+    +M   GC P+ +T+  +I  L K+ + D+A +    MI KG
Sbjct: 373 MIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432

Query: 573 I 573
           +
Sbjct: 433 L 433



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 5/369 (1%)

Query: 246 LSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           LS  ++   I  N  TL +LI  FC     G +  +F +L ++++ G++PN  T T L+ 
Sbjct: 74  LSKQMEVKGIEPNLVTLNILINCFCH---LGQMSFSFSVLGKILKLGYQPNTITLTTLMK 130

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC KG  +K+     K+V +  ++ N  +Y  +++G CK  +   A   L  +++    
Sbjct: 131 GLCLKGEVQKSVHFHDKVV-AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTG 189

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   Y ++I G CK      AYD    M   G  PN+  Y  +I G C  G++  A+ L
Sbjct: 190 LNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSL 249

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +   + +  +  TY IL+    K+ + K+A  L   M   G   D+  YT+L+  FC+
Sbjct: 250 LNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCK 309

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            + + ++   F +    G+ P K TYT++I G  + G +  A K FQ +   GC  D  T
Sbjct: 310 NQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCT 369

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  +I GLCK+  LDEA      M   G  P  VT   +     K+ ++  A  +L  + 
Sbjct: 370 YNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMI 429

Query: 605 KKLWIRTVN 613
            K  +R  N
Sbjct: 430 AKGLLRFRN 438



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 4/349 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++   FS++ ++   G    T TL  ++   C  G V+ +    D++ 
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   +  SY  ++   C++G    A ++L  + D    L+      +I   C      
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKL-- 207

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A++   EM  +G  PNV T+T LI G C  G    AF L  +++   N  PNV+TY
Sbjct: 208 -VNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILK-NINPNVYTY 265

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CKE K+  A+ LL  M  +G   +  TYTSL+ G CK  N ++A  L   M +
Sbjct: 266 AILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKE 325

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN Y Y A+IDGLCK GR+++A +L +    +    D  TY +++    K+    +
Sbjct: 326 WGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDE 385

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           AL +  +M   G  P++  +  +I +  ++ +  ++EK   E I  GL 
Sbjct: 386 ALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 150/346 (43%), Gaps = 39/346 (11%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L ++M  KG +PN+ T  +LI+  C  G    +F +  K+++   Y+PN  T T ++
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKL-GYQPNTITLTTLM 129

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C + ++ ++    +++  QG   N  +Y +L+ G CK+G    A   + ++      
Sbjct: 130 KGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTG 189

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N+  YN IIDGLCK   V EAY+     F  E+ A                        
Sbjct: 190 LNVVMYNTIIDGLCKDKLVNEAYD-----FYSEMNA------------------------ 220

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
                  G+ P++  YTTLI  FC   ++  +     E I   + P   TY  +I    +
Sbjct: 221 ------RGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCK 274

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G +  A      M+  G   D +TY +L+ G CK   LD+A   +  M   GI P + T
Sbjct: 275 EGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYT 334

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
              L    CK G    A  + + L  K   + + T N +I  LC E
Sbjct: 335 YTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKE 380



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 149/327 (45%), Gaps = 17/327 (5%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           ++ P +  +  ++    K +  + A  L ++M+ +G+ PN  T   LI   C +G    +
Sbjct: 47  HHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFS 106

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + ++  + K G  PN      ++ GLC KG VQ++     K   +  Q ++++Y  LL+ 
Sbjct: 107 FSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNG 166

Query: 447 HLKQAETKQALGLFCRMVK---AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
             K  ET+ A+  F RM++    GLN  +  Y T+I   C+ K + E+  F+ E    G+
Sbjct: 167 LCKIGETRCAIK-FLRMIEDSSTGLN--VVMYNTIIDGLCKDKLVNEAYDFYSEMNARGI 223

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           FP   TYT++I G+   G ++ A      M      P+  TY  LI  LCK+ K+ EA  
Sbjct: 224 FPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKN 283

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW-----IRTVNTLI 616
               M  +G     VT  +L   +CK    D ATA+     +  K W       T   LI
Sbjct: 284 LLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALF----MKMKEWGIQPNKYTYTALI 339

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVD 643
             LC   R+  A   F  LL K   +D
Sbjct: 340 DGLCKGGRLKDAQKLFQDLLVKGCCID 366



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 4/224 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F  M+     P I  +  ++    + K    +    ++    G+ P   T   +I
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILI 94

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +   G +S +     ++ ++G  P+ IT   L+ GLC + ++ ++  F++ ++ +G  
Sbjct: 95  NCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQ 154

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK G++  A+  L  ++     L +   NT+I  LC +K V  A  F
Sbjct: 155 MNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDF 214

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           + ++  +    + ++   L    C        FS L++ I + I
Sbjct: 215 YSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNI 258



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 3/137 (2%)

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           D  +  A+  F  M  +   P  + +G ++  L K      A    + M  KGI P  VT
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L   +C  G  + +  +L  + K  +     T+ TL++ LC +  V  +  F  K++
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 637 GKDQNVDRVSLAALKNA 653
            +   +++VS   L N 
Sbjct: 150 AQGFQMNQVSYGTLLNG 166


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 256/571 (44%), Gaps = 53/571 (9%)

Query: 40  LANSKQPAFSSTSSSPSPPQSLV---KTVCSMVLESYYQQFH--LRSSPPRLNLQIDIDS 94
           L N+K P FSS +S+ + P S      T+  ++ + ++ +    ++ + P   LQ   +S
Sbjct: 25  LNNTKTP-FSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS 83

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAI----GFAKFRHFMRLYIVCATSLISN---- 146
                          EA   + L +F W             F RL  + A +   N    
Sbjct: 84  ---------------EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128

Query: 147 --GNFER-AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
              +F + AH     +  S + +G      S++++M              +V    + G 
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDM--------------LVWAYVKNGE 174

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A E FD     G    A S   M+V+  + GR+   +     M+ R   ++  T  +
Sbjct: 175 MDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDV 234

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I   C  G     ++A +++E+M   G+ P+V T+  +IDG CK G   KA  L  ++V
Sbjct: 235 VINGLCKVG---KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +    PN  T+  +I G+C++E +  A+ + E M+ QGL PN  TY SLI G C  G  
Sbjct: 292 -AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A  L D M   G  PN+  YNA+I+G CKK  ++EA E+L    +R L  + IT+  L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  + K      A  L   M+  G+ P++  Y  LI  FCR+  +KE+ K  +E    GL
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGLCKQSKLDE 560
                TY  ++    + G    AV+    M  +   G   + +TY  LI G C + KL+E
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           A +    M+ KG+ P   T   L  E  ++G
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 187/388 (48%), Gaps = 7/388 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +  A E  +     G++ +  +   ++  L K+G       ++ +++R      NV T
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVT 231

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I+G CK  K  +A  ++E MK  G  P+  TY ++I G+CK G   +A  L+  M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +   PN   +N +IDG C+   V  A ++ ++  ++ LQ + +TY  L++      +  
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +ALGL  +M   GL P++  Y  LI  FC++K +KE+ +   +    GL P   T+ ++I
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G +  A      M   G  P+  TY  LI G C++  + EA +  + M G G+ 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 575 PCEVTRVTLAYEYCKQGDSATA------MIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
              VT   L    CK+G++  A      M ++E   ++  I T N LI+  C++ ++  A
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 531

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYE 656
               +++L K    +R +   L++   E
Sbjct: 532 NRLLNEMLEKGLIPNRTTYDILRDEMME 559



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 169/366 (46%), Gaps = 40/366 (10%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           + V    L   G F++A +V++ M               +  + + G++ +  +++ EM 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
              +     T N ++   C    V  A++VF+EM  +G+  +  +Y  ++   C  G++ 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA      M   G   +  T   LI  FC K     +K+A E+L+++ ++G  PNV T  
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKM---LKEAREMLDDIGKRGLAPNVITFN 408

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LID   K G  + AF L   ++      PNV TY  +I G+C+E  +  A  L + M+ 
Sbjct: 409 TLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMD---LMGKEGCTPNIYAYNAIIDGLCKKGR 417
            GL  +  TY  L+   CK G   +A  L+D   LM K+G   NI  YN +I G C KG+
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI--HAY 475
           ++EA  LL +  ++ L  ++ TY IL  E                M++ G  PDI  H Y
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDILRDE----------------MMEKGFIPDIDGHLY 571

Query: 476 TTLIAA 481
              I++
Sbjct: 572 NVSISS 577



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 161/346 (46%), Gaps = 20/346 (5%)

Query: 306 LCKKGWTEKAF----------RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML- 354
           LC   WT+K F          RL   L  + NY    +   A++  + K    + + +  
Sbjct: 91  LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNY----NKIRALLDSFAKNAHYSNSTIFH 146

Query: 355 -LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            L  +   G   N+     L++ + K G  + A +  D  G  G   +  + N ++  L 
Sbjct: 147 SLSVLGSWGC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLV 205

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+GR+     + K+  +R +  + +T+ ++++   K  + ++A  +   M   G +P + 
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y T+I  +C+  KM +++   +E +   + P + T+  +I G+ RD N+++A K F+ M
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G  P+ +TY +LI+GLC   KLDEA    + M G G+ P  VT   L   +CK+   
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             A  +L+ + K+     + T NTLI       R+  A L    +L
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 225/446 (50%), Gaps = 14/446 (3%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL- 246
           T   + +V   C+L +V+ A E F  M  +G      +   ++    R+ R+  A  W+ 
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA--WVF 212

Query: 247 SAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            A + R  I  N  T  ++I   C +G    +K+A   L  M   G KP + T+  L+ G
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEG---KLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
              +G  E A RL +  ++S  ++P++ TY  ++S  C E    RA  +L  MKE GL+P
Sbjct: 270 FSLRGRIEGA-RLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVP 325

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           ++ +Y  LI G    G+ E A+   D M K+G  P  Y YN +I GL  + +++ A  L+
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  ++ +  D +TY IL++ + +  + K+A  L   M+  G+ P    YT+LI   CR+
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K +E+++ F++ +  G+ P      +++ G+   GN+  A    + M+ +   PD++TY
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---S 602
             L+ GLC + K +EA +    M  +GI P  ++  TL   Y K+GD+  A ++ +   S
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565

Query: 603 LDKKLWIRTVNTLIRKLCSEKRVGMA 628
           L     + T N L++ L   +   +A
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELA 591



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 7/433 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L+    F    E    +++  + + R++  +    +M    +     T N ++ + C+ G
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A+     M   G+     +Y  +V  +   GR+  A   +S M  +G   D  T  
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +++  C++G      +A E+L EM   G  P+  ++ +LI G    G  E AF    ++
Sbjct: 300 PILSWMCNEG------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V+     P  +TY  +I G   E K+  AE+L+  ++E+G++ ++ TY  LI G+C+ G+
Sbjct: 354 VKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A+ L D M  +G  P  + Y ++I  LC+K + +EA EL +K   + ++ D +    
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H       +A  L   M    +NPD   Y  L+   C + K +E+ +   E    G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   +Y ++I GY + G+   A      M  +G  P  +TY AL+ GL K  + + A 
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592

Query: 563 QFYESMIGKGISP 575
           +    M  +GI P
Sbjct: 593 ELLREMKSEGIVP 605



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 180/356 (50%), Gaps = 7/356 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F+  GR++    ++ EM + G      T N ++   C  G    A EV  EM   G
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIG 322

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D+ SY +++      G +  A  +   M+ +G +    T   LI           I+
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF---MENKIE 379

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+ E+  KG   +  T+ +LI+G C+ G  +KAF L  +++ +D  +P   TYT++
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSL 438

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++ K   A+ L E++  +G+ P+     +L+ GHC +GN +RA+ L+  M     
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN ++ GLC +G+ +EA EL+ +  +R ++ D I+Y  L+S + K+ +TK A  
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFM 558

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +   M+  G NP +  Y  L+    + ++ + +E+  +E  + G+ P   ++ S+I
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 166/412 (40%), Gaps = 55/412 (13%)

Query: 276 SIKQAFELLEEMV--RKGWKPNVYTH------------TVLIDGL----CKKGWTEKAFR 317
           S K   +LL+E+V  RK    N++              T+L D L    C+    ++A  
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIE 176

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            F  L++   + P   T   +++   +  ++  A +    M    +  N  T+  +I   
Sbjct: 177 CFY-LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVL 235

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  ++A   + +M   G  P I  YN ++ G   +GR++ A  ++ +   +  Q D 
Sbjct: 236 CKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM 295

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  +LS    +    + L     M + GL PD  +Y  LI        ++ +  +  E
Sbjct: 296 QTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  G+ PT  TY ++I G   +  I +A    + + + G   D++TY  LI+G C+   
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
             +A   ++ M+  GI P + T  +L Y  C++  +  A       D+            
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA-------DE------------ 453

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQ 668
                         F K++GK    D V +  L +  C   N    FS L +
Sbjct: 454 -------------LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 53/297 (17%), Positives = 107/297 (36%), Gaps = 36/297 (12%)

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           +K  ++  ++ L  A  R      I + +L+    +     +A+  F  M + G  P   
Sbjct: 132 RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTE 191

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
               ++    R  +++ +  F+ +     +     T+  MI    ++G +  A  +   M
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  P  +TY  L+ G   + +++ A      M  KG  P   T   +    C +G +
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRA 311

Query: 594 ATAM-------IILESLDKKLWIR----------------------------TVNTLIRK 618
           +  +       ++ +S+   + IR                            T NTLI  
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           L  E ++  A +   ++  K   +D V+   L N  C   +    F+   + + +GI
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 216/414 (52%), Gaps = 13/414 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGA 254
           C++GL + A+ VFD M + G+  D+S  +L+V +Y RMG++  A  +L+ +    +    
Sbjct: 120 CKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSP 179

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
            + N  L +L+        +  + +A  L  E +   + P+VY+  +LI GLC+ G  +K
Sbjct: 180 FVYNNLLNMLVK-------QNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDK 232

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSL 373
           AF  F  +     + P++ +Y  +I+G+C+  ++++  ++L E M  +G+ P+  TYTS+
Sbjct: 233 AFEFFQNMGNFGCF-PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+CK+G+ + A +L D M   G  PN + +N +IDG  K G ++ A  + +K      
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D +T+T L+  + ++ E  Q L L+  M    L+P+++ Y  LI A C++ +++E+  
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           F +   ++ + P    Y  +I G+ + G +  A      M +  C PD IT+  LI G C
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            + ++ EA   +  MI     P E+T  +L     K G    A  I ++  +KL
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL 525



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 218/494 (44%), Gaps = 36/494 (7%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           LVK VC++   S+            LN  I         A  V+   ++    ++ L FF
Sbjct: 49  LVKVVCTLFFRSHSLNACFGYLSRNLNPSI---------AFEVIKRFSD---PLLGLKFF 96

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAE 165
            ++       H    Y +   +L   G  + A  V  CM               VSS+A 
Sbjct: 97  EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYAR 156

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +G+L    + + E+   G+ +     N ++ +  +  LV+ A  +F E        D  S
Sbjct: 157 MGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL- 284
           + +++   CR+G + +A  +   M + G   D  +   LI  FC       I +  +LL 
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV---NEISKGHDLLK 273

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E+M+ KG  P+V T+T +I G CK G  + A  LF ++V S   KPN  T+  +I G+ K
Sbjct: 274 EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV-SSGIKPNDFTFNVLIDGFGK 332

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              M  A ++ E+M   G LP+  T+TSLI G+C+ G   +   L + M     +PN+Y 
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +I+ LCK+ R++EA   L+     E+      Y  ++    K  +  +A  +   M 
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG--N 522
           +    PD   +T LI   C + +M E+   F + I     P + T  S+I   L+ G  N
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512

Query: 523 ISSAVKY--FQRMN 534
            +S +K    Q++N
Sbjct: 513 EASQIKQAALQKLN 526



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 4/307 (1%)

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +TY  ++   CK    + A+++ + M+  G+LP+++    L+  + ++G  + A + ++ 
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           +   G   + + YN +++ L K+  V EA  L ++  +     D  ++ IL+    +  E
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-AITAGLFPTKETYT 511
             +A   F  M   G  PDI +Y TLI  FCR  ++ +     +E  +  G+ P   TYT
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S+I GY + G++ +A + F  M   G  P++ T+  LI G  K   +  A   YE M+  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G  P  VT  +L   YC++G+    + + E +  +     + T   LI  LC E R+  A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 629 ALFFHKL 635
             F   L
Sbjct: 410 RNFLRHL 416



 Score = 42.4 bits (98), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +N   + Y  L+   C+      ++  F    + G+ P       ++  Y R G + SA 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
            +   ++  G       Y  L++ L KQ+ +DEA   +   +     P   +   L    
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 588 CKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           C+ G+   A    +++        I + NTLI   C    +       H LL +D  +  
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKG 280

Query: 645 VS 646
           VS
Sbjct: 281 VS 282


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 206/435 (47%), Gaps = 58/435 (13%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  +Y  M+  YC  G+V  A RW +   +R    D  T   LI   C    RG    A 
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCG---RGRTANAL 180

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            +L+EM+R+   P+V T+T+L++  CK+   ++A +L L  +R     P++ TY  +++G
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL-LDEMRDKGCTPDIVTYNVVVNG 239

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C+E +++ A   L+ +   G  PNT +Y  ++ G C    +E A +LM  MG++GC PN
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N +I  LC+KG V+ A E+L++  +     + ++Y  LL    KQ +  +A+    
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQK----------------------------------- 486
            MV  G  PDI +Y TL+ A CR                                     
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K KE+ +   E ++ GL P   TY+++  G  R+  I  A++ F ++  +G  P+ + Y 
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           A+I GLCK+ +   A   +  MIG G  P E                +T  I++E L  +
Sbjct: 480 AIILGLCKRRETHSAIDLFAYMIGNGCMPNE----------------STYTILIEGLAYE 523

Query: 607 LWIRTVNTLIRKLCS 621
             I+    L+ +LCS
Sbjct: 524 GLIKEARDLLDELCS 538



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 188/409 (45%), Gaps = 42/409 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G V+ A     E   R V  DA +   ++   C  GR   A   L  ML R  + D 
Sbjct: 139 CGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDV 195

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G  + A   
Sbjct: 196 VTYTILLEATCK---RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE- 251

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT--------- 369
           FLK + S   +PN  +Y  ++ G C  E+   AE L+  M ++G  PN  T         
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 311

Query: 370 --------------------------YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
                                     Y  L++  CK    ++A   +DLM   GC P+I 
Sbjct: 312 RKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 371

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           +YN ++  LC+ G V  A ELL +   +      I+Y  ++    K  +TK+AL L   M
Sbjct: 372 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V  GL PDI  Y+T+ A  CR+ +++++ + F +    G+ P    Y ++I G  +    
Sbjct: 432 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 491

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            SA+  F  M   GC P+  TY  LI GL  +  + EA    + +  +G
Sbjct: 492 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 182/378 (48%), Gaps = 4/378 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
            ER       ++      GR     +++ EM          T   ++   C+    + A 
Sbjct: 156 VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 215

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++ DEM  +G   D  +Y ++V   C+ GRV +A  +L  +   G   +  +  +++   
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C        + A EL+ EM +KG  PNV T  +LI  LC+KG  E A  + L+ +     
Sbjct: 276 CTA---ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV-LEQIPKYGC 331

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN  +Y  ++  +CK++KM++A   L+ M  +G  P+  +Y +L+   C+ G  + A +
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  +  +GC P + +YN +IDGL K G+ +EA ELL +   + LQ D ITY+ + +   
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 451

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           ++   + A+  F ++   G+ P+   Y  +I   C++++   +   F   I  G  P + 
Sbjct: 452 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 511

Query: 509 TYTSMICGYLRDGNISSA 526
           TYT +I G   +G I  A
Sbjct: 512 TYTILIEGLAYEGLIKEA 529



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 146/281 (51%), Gaps = 11/281 (3%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R ++   ++ EM   G P    T N ++   C  GLVE A EV +++   G   ++ SY 
Sbjct: 280 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYN 339

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++ A+C+  ++ +A  +L  M+ RG   D  +   L+TA C     G +  A ELL ++
Sbjct: 340 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS---GEVDVAVELLHQL 396

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             KG  P + ++  +IDGL K G T++A  L  ++V S   +P++ TY+ + +G C+E++
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV-SKGLQPDIITYSTIAAGLCREDR 455

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A     ++++ G+ PNT  Y ++I G CK      A DL   M   GC PN   Y  
Sbjct: 456 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 515

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +I+GL  +G ++EA +LL +   R  +       ILL  HL
Sbjct: 516 LIEGLAYEGLIKEARDLLDELCSRGEE-------ILLDVHL 549



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 16/336 (4%)

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L ++G  ++A RL          +P+  T  A+I       +   A  +L         P
Sbjct: 77  LVRRGELDEALRLV-----GSARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----P 126

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +   Y +++ G+C  G  + A        +     + Y  + +I GLC +GR   A  +L
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +  +R    D +TYTILL    K++  KQA+ L   M   G  PDI  Y  ++   C++
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++ ++ +F +   + G  P   +Y  ++ G         A +    M Q GC P+ +T+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             LIS LC++  ++ A +  E +   G SP  ++   L + +CKQ     AM  L+ +  
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +     I + NTL+  LC    V +A    H+L  K
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 4/176 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++    G +     ++ ++ + G   +  + N V+    + G  + A E+ +EM ++G
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  +    CR  R+ +A R    + D G   +      +I   C    R    
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK---RRETH 492

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RSDNYKPNVH 333
            A +L   M+  G  PN  T+T+LI+GL  +G  ++A  L  +L  R +    +VH
Sbjct: 493 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVH 548


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 216/414 (52%), Gaps = 13/414 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGA 254
           C++GL + A+ VFD M + G+  D+S  +L+V +Y RMG++  A  +L+ +    +    
Sbjct: 120 CKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSP 179

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
            + N  L +L+        +  + +A  L  E +   + P+VY+  +LI GLC+ G  +K
Sbjct: 180 FVYNNLLNMLVK-------QNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDK 232

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSL 373
           AF  F  +     + P++ +Y  +I+G+C+  ++++  ++L E M  +G+ P+  TYTS+
Sbjct: 233 AFEFFQNMGNFGCF-PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+CK+G+ + A +L D M   G  PN + +N +IDG  K G ++ A  + +K      
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D +T+T L+  + ++ E  Q L L+  M    L+P+++ Y  LI A C++ +++E+  
Sbjct: 352 LPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN 411

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           F +   ++ + P    Y  +I G+ + G +  A      M +  C PD IT+  LI G C
Sbjct: 412 FLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNC 471

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
            + ++ EA   +  MI     P E+T  +L     K G    A  I ++  +KL
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL 525



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 218/494 (44%), Gaps = 36/494 (7%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           LVK VC++   S+            LN  I         A  V+   ++    ++ L FF
Sbjct: 49  LVKVVCTLFFRSHSLNACFGYLSRNLNPSI---------AFEVIKRFSD---PLLGLKFF 96

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAE 165
            ++       H    Y +   +L   G  + A  V  CM               VSS+A 
Sbjct: 97  EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYAR 156

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +G+L    + + E+   G+ +     N ++ +  +  LV+ A  +F E        D  S
Sbjct: 157 MGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL- 284
           + +++   CR+G + +A  +   M + G   D  +   LI  FC       I +  +LL 
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV---NEISKGHDLLK 273

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E+M+ KG  P+V T+T +I G CK G  + A  LF ++V S   KPN  T+  +I G+ K
Sbjct: 274 EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV-SSGIKPNDFTFNVLIDGFGK 332

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              M  A ++ E+M   G LP+  T+TSLI G+C+ G   +   L + M     +PN+Y 
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +I+ LCK+ R++EA   L+     E+      Y  ++    K  +  +A  +   M 
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG--N 522
           +    PD   +T LI   C + +M E+   F + I     P + T  S+I   L+ G  N
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512

Query: 523 ISSAVKY--FQRMN 534
            +S +K    Q++N
Sbjct: 513 EASQIKQAALQKLN 526



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 4/307 (1%)

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +TY  ++   CK    + A+++ + M+  G+LP+++    L+  + ++G  + A + ++ 
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           +   G   + + YN +++ L K+  V EA  L ++  +     D  ++ IL+    +  E
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-AITAGLFPTKETYT 511
             +A   F  M   G  PDI +Y TLI  FCR  ++ +     +E  +  G+ P   TYT
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S+I GY + G++ +A + F  M   G  P++ T+  LI G  K   +  A   YE M+  
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G  P  VT  +L   YC++G+    + + E +  +     + T   LI  LC E R+  A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 629 ALFFHKL 635
             F   L
Sbjct: 410 RNFLRHL 416



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +N   + Y  L+   C+      ++  F    + G+ P       ++  Y R G + SA 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
            +   ++  G       Y  L++ L KQ+ +DEA   +   +     P   +   L    
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 588 CKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           C+ G+   A    +++        I + NTLI   C    +       H LL +D  +  
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKG 280

Query: 645 VS 646
           VS
Sbjct: 281 VS 282


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 237/515 (46%), Gaps = 13/515 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S     G ++E F    EM + GL     T   ++   C+ G ++ A+ + DEM   G
Sbjct: 286 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSG 345

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  +V  + + G+  EA   L+ M+  G   +      LI   C  G  G   
Sbjct: 346 LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG--- 402

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL EM++ G +P+ +T+  L+ G  +    + AF L L  +R+    PN +TY  M
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL-LNEMRNSGILPNAYTYGIM 461

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C+  +   A  LLE M  +GL PN   Y  LI GH K G+   A + ++ M K   
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ YN++I GL   GR++EA E   +  +R L  D+ TY+ L+  + K    ++A  
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+ +GL P+   YT L+  + +    ++     Q  + +G  P    Y  +I    
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R  N+  A      + + G  PD   Y +LISGLCK + +++A    + M  +G+ P  V
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIV 701

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
               L   +C+ GD + A  + +S+  K  +    T   LI   C    +  A   +  +
Sbjct: 702 CYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDM 761

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           L +    D      L   C ++      +DL Q +
Sbjct: 762 LDRGIAPDAFVYNVLATGCSDA------ADLEQAL 790



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 224/476 (47%), Gaps = 14/476 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +IG+L     ++ EM   G    T T + ++    +    + A E+ +EM   G
Sbjct: 391 LIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A +Y +M+   C+ G   EA   L  M+  G   +      LI     +G    I 
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH---IS 507

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E LE M +    P+++ +  LI GL   G  E+A   + + V+     P+  TY+ +
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQ-VQKRGLVPDEFTYSGL 566

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK   + +A+ LL++M   GL PN +TYT L+ G+ K  + E+   ++  M   G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  +I  L +   ++ A+ +L +  +  L  D   Y+ L+S   K A+ ++A+G
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M K GL P I  Y  LI  FCR   +  +   F   +  GL P   TYT++I G  
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G+I+ A   ++ M   G APD   Y  L +G    + L++A    E M  +G +   +
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL 806

Query: 579 TRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIR------KLCSEKRV 625
              TL   +CK+G    T  ++   +D+++    +TV  +I       KLC   RV
Sbjct: 807 FS-TLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRV 861



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 225/495 (45%), Gaps = 16/495 (3%)

Query: 117 LSFFYWA---IGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGF 173
           L FFYW+   I       F RL    A SL +  +F +A+ ++  M+ +      +    
Sbjct: 100 LDFFYWSRPRIAPPSADAFARL----AASLCAASHFPQANGLLHQMILAHPHPPLVLASI 155

Query: 174 SMVIEMTN-----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
              I+ ++           T+ L+ +V    + G V  A +V   M   G+         
Sbjct: 156 QRAIQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNG 215

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++    R   +    +    M   G   D  T +  + A C      + K+ FE   EM 
Sbjct: 216 LLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFE---EMR 272

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           R+    N  T+ V+I GLC+ G  E+AF    ++V      P+  TY A+++G CK  ++
Sbjct: 273 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY-GLSPDAFTYGALMNGLCKGGRL 331

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A+ LL+ M   GL PN   Y +L+ G  K G    A+D+++ M   G  PN   Y+ +
Sbjct: 332 KEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNL 391

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GLCK G++  A +LL +  +   + D  TY  L+  H +  +   A  L   M  +G+
Sbjct: 392 IRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGI 451

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P+ + Y  +I   C+  + KE+    +E I+ GL P    Y  +I G+ ++G+IS A +
Sbjct: 452 LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACE 511

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
             + M +    PD   Y +LI GL    +++EA ++Y  +  +G+ P E T   L + YC
Sbjct: 512 SLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 571

Query: 589 KQGDSATAMIILESL 603
           K  +   A  +L+ +
Sbjct: 572 KTRNLEKADQLLQQM 586



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 55/452 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           M++   + G  KE  +++ EM + GL P        ++G + E G +  A E  + M   
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE-GHISLACESLENMTKA 519

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            V  D   Y  ++     +GR+ EA+ + + +  RG + D  T + LI  +C      ++
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR---NL 576

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A +LL++M+  G KPN  T+T L++G  K    EK   +   ++ S + KP+ H Y  
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD-KPDNHIYGI 635

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I    + E M  A M+L  +++ GL+P+ + Y+SLI G CK+ + E+A  L+D M KEG
Sbjct: 636 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P I  YNA+IDG C+ G +  A  +      + L  + +TYT L+  + K  +   A 
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAF 755

Query: 458 GLFCRMVKAGLNPDIHAY----------------------------------TTLIAAFC 483
            L+  M+  G+ PD   Y                                  +TL+  FC
Sbjct: 756 DLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFC 815

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           ++ +++E+EK     +   + P  +T  ++I  + + G +  A + F  + Q   +    
Sbjct: 816 KRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS---- 871

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                      QS  D     +  MI KG+ P
Sbjct: 872 -----------QSSTDRFSLLFTDMINKGLIP 892



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 172/364 (47%), Gaps = 4/364 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           GS++ A +++  M   G  P       L+  L +    E  ++L    +      P+V+T
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL-KGFMEGAGIPPDVYT 247

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+  +  +CK    + A+ + E M+ +    N  TY  +I G C+ G  E A+   + M 
Sbjct: 248 YSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV 307

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G +P+ + Y A+++GLCK GR++EA  LL +     L+ + + Y  L+   +K+ +  
Sbjct: 308 DYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAA 367

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +   M+ AG+ P+   Y  LI   C+  ++  + K   E I  G  P   TY  ++
Sbjct: 368 EAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLM 427

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ +  +   A +    M   G  P+  TYG +I+GLC+  +  EA    E MI +G+ 
Sbjct: 428 QGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLK 487

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P       L   + K+G  + A   LE++ K   +  +   N+LI+ L +  R+  A  +
Sbjct: 488 PNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEY 547

Query: 632 FHKL 635
           + ++
Sbjct: 548 YAQV 551



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 6/243 (2%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           M +  +  T +  NG     H +   ++S   ++  +++   ++ EM   GL       N
Sbjct: 646 MEVAFMVLTEVEKNGLVPDLH-IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYN 704

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            ++   C  G +  A  VFD + A+G+  +  +Y  ++   C+ G +T+A      MLDR
Sbjct: 705 ALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDR 764

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   D     +L T   D      ++QA  L EEM  +G+  +V   + L+ G CK+G  
Sbjct: 765 GIAPDAFVYNVLATGCSDA---ADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRL 820

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++  +L L ++      PN  T   +I+ + K  K+  A  +   ++++    ++    S
Sbjct: 821 QETEKL-LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFS 879

Query: 373 LIY 375
           L++
Sbjct: 880 LLF 882



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y ++G++ +A +    M  +G AP       L+  L +   ++   +    M G GI P 
Sbjct: 185 YKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPD 244

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
             T  T    +CK  D   A  + E + ++   +   T N +I  LC    V  A  F  
Sbjct: 245 VYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 304

Query: 634 KLLGKDQNVDRVSLAALKNA 653
           +++    + D  +  AL N 
Sbjct: 305 EMVDYGLSPDAFTYGALMNG 324


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 238/492 (48%), Gaps = 15/492 (3%)

Query: 114 MVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEIGRLKE 171
           +V  S F+ AI  A+ + F  +   C   L  NG    AH +  +  M++ F    +   
Sbjct: 88  LVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTCF 141

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            +S++ ++   G    T+T N ++   C  G V  A  + D M   G   D  +Y  +V 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             CR G  + A   L  M +R    D  T + +I + C  G    I  A  L +EM  KG
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG---CIDAAISLFKEMETKG 258

Query: 292 WKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
            K +V T+  L+ GLCK G W + A  L LK + S    PNV T+  ++  + KE K+  
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L + M  +G+ PN  TY +L+ G+C       A +++DLM +  C+P+I  + ++I 
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G C   RV +  ++ +   +R L A+ +TY+IL+    +  + K A  LF  MV  G+ P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+  Y  L+   C   K++++ + F++   + +      YT++I G  + G +  A   F
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             +   G  P+ +TY  +ISGLCK+  L EA      M   G +P + T  TL   + + 
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 591 GD-SATAMIILE 601
           GD +A+A +I E
Sbjct: 557 GDLTASAKLIEE 568



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 228/462 (49%), Gaps = 12/462 (2%)

Query: 163 FAEIGRLKEGFSMVIEMTN----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ I R K+ F++V++       NG+     TLN ++   C      +A  V  ++   G
Sbjct: 95  FSAIARTKQ-FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  ++   C  G+V++A   +  M++ G   D  T   ++   C  G      
Sbjct: 154 YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSG---DTS 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF++L +M  +  K +V+T++ +ID LC+ G  + A  LF K + +   K +V TY ++
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSL 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK  K N   +LL+ M  + ++PN  T+  L+    K G  + A +L   M   G 
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI  YN ++DG C + R+ EA  +L    + +   D +T+T L+  +         + 
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  + K GL  +   Y+ L+  FC+  K+K +E+ FQE ++ G+ P   TY  ++ G  
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A++ F+ + +       + Y  +I G+CK  K+++A   + S+  KG+ P  +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
           T   +    CK+G  + A I+L  +++        T NTLIR
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 203/421 (48%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  +M+  +CR  +   A   L  ++  G   D  T   LI   C     G +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLC---LEGKV 174

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV  G +P++ T+  +++G+C+ G T  AF +  K+    N K +V TY+ 
Sbjct: 175 SKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM-EERNVKADVFTYST 233

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C++  ++ A  L + M+ +G+  +  TY SL+ G CK G +     L+  M    
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  +N ++D   K+G++QEA EL K+   R +  + ITY  L+  +  Q    +A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV+   +PDI  +T+LI  +C  K++ +  K F+     GL     TY+ ++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A + FQ M   G  PD +TYG L+ GLC   KL++A + +E +    +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V   T+    CK G    A  +  SL     K  + T   +I  LC +  +  A +   K
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 635 L 635
           +
Sbjct: 534 M 534



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 203/405 (50%), Gaps = 8/405 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+     G     F M+ +M    +     T + ++   C  G ++ A  +F EM  +G
Sbjct: 199 IVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + +   +Y  +V   C+ G+  +    L  M+ R  + +  T  +L+  F  +G    ++
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG---KLQ 315

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL +EM+ +G  PN+ T+  L+DG C +    +A  +   +VR +   P++ T+T++
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSL 374

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC  ++++    +   + ++GL+ N  TY+ L+ G C+ G  + A +L   M   G 
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  ++DGLC  G++++A E+ +   + ++    + YT ++    K  + + A  
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YT +I+  C++  + E+    ++    G  P   TY ++I  +L
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 519 RDGNISSAVKYFQRMNQIGCAPD----NITYGALISGLCKQSKLD 559
           RDG+++++ K  + M   G + D     +    L+SG   +S LD
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLD 599



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 192/408 (47%), Gaps = 4/408 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ +   +V  M  NG      T N +V   C  G    A ++  +M  R V AD  +Y
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ + CR G +  A      M  +G      T   L+   C  G          LL++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKD 288

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +   PNV T  VL+D   K+G  ++A  L+ +++ +    PN+ TY  ++ GYC + 
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQN 347

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  +L+ M      P+  T+TSLI G+C V   +    +   + K G   N   Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G+++ A EL ++     +  D +TY ILL       + ++AL +F  + K+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++  I  YTT+I   C+  K++++   F      G+ P   TYT MI G  + G++S A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               ++M + G AP++ TY  LI    +   L  + +  E M   G S
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF +++RS    P +  ++   S   + ++ N      ++++  G+  N  T   
Sbjct: 70  DDAIALFQEMIRSRPL-PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      AY ++  + K G  P+   +N +I+GLC +G+V +A  L+ +  +  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q D +TY  +++   +  +T  A  +  +M +  +  D+  Y+T+I + CR   +  + 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E  T G+  +  TY S++ G  + G  +      + M      P+ IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K+ KL EA + Y+ MI +GISP  +T  TL   YC Q   + A  +L+ + +      I
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T  +LI+  C  KRV      F  +  +    + V+ + L     +S K  L  +L Q 
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 670 IA 671
           + 
Sbjct: 429 MV 430



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 24/181 (13%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y +    L  NG  E+A E+ + +  S  ++G +   ++ +IE    G+           
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM--YTTIIE----GM----------- 483

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
              C+ G VE A  +F  +  +GV  +  +Y +M+   C+ G ++EA+  L  M + G  
Sbjct: 484 ---CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            ++ T   LI A       G +  + +L+EEM   G+  +  +  ++ID L   G  +K+
Sbjct: 541 PNDCTYNTLIRAHLRD---GDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596

Query: 316 F 316
           F
Sbjct: 597 F 597


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 203/415 (48%), Gaps = 4/415 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G L E  +++  M   G      T N ++    + G +E  E++  EM   G
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  +V  +C+ GR+  A  + + M   G + +  T +  + AFC  G    ++
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM---VR 316

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  +M  KG KPN  T+T L+DG CK G  + A  L  ++V+      NV TYT +
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ-GVPLNVVTYTVL 375

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE K+  AE +   M+  G+  N   YT+LI+GH    N ERA  L+  M  +G 
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  Y A+I GLC   ++ EA  LL K  +  L+ + + YT ++    K  +  +A+ 
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+ +G  P+I  Y  L+   C+   + E+   F + +  GL P  + YT+++ G  
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           ++G +  AV     M   G + DN+   +L+ G  KQ  L +A      MI  G+
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 224/459 (48%), Gaps = 9/459 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  ++S  A+ G L +    +  +    +P  T T N ++         E A  +F+++
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQL 189

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A  V     ++ +M+   C+ G + EA   L+ M   G   D  T   LI  +   G  
Sbjct: 190 PAPNV----FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGY---GKC 242

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +++  +L+ EM   G +P+V T+  L++  CK G  E+A+  F ++ R +    NV T
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKR-EGVMANVVT 301

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++  +  +CK   +  A  L  +M+ +G+ PN  TYT L+ G CK G  + A  L + M 
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   N+  Y  ++DGLCK+G+V EA ++ +   +  ++A+++ YT L+  H     ++
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M   G+  D+  Y  LI   C  +K+ E++    +    GL P    YT+++
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               +    S A+   Q+M   G  P+ +TY AL+ GLCK   +DEA   +  M+  G+ 
Sbjct: 482 DACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLE 541

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV 612
           P       L    CK G    A+++L E +DK + +  V
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV 580



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 213/449 (47%), Gaps = 4/449 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L+E   +V EM   G      T N +V   C+ G +E A   F EM   G
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  ++   V A+C+ G V EA +  + M  +G   +  T T L+   C  G    + 
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAG---RLD 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L  EMV++G   NV T+TVL+DGLCK+G   +A  +F +L+     + N   YT +
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVF-RLMERAGIRANELLYTTL 410

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+   +   RA  LL  MK++G+  + + Y +LI+G C +   + A  L++ M + G 
Sbjct: 411 IHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL 470

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  I+D   K  +  EA  LL+K      + + +TY  L+    K     +A+ 
Sbjct: 471 KPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +MV  GL P++ AYT L+   C+  ++ ++     E I  G+       TS++ G+L
Sbjct: 531 HFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHL 590

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A     +M   G   D   Y   + G C  + + EA +    MI  GI+P  V
Sbjct: 591 KQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAV 650

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKL 607
               L  +  K G+   A I+   ++  L
Sbjct: 651 VYNCLINKCQKLGNMEEAAILQNEMESLL 679


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 33/480 (6%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           S+  +M   G+   T T N ++   CE   +++A E+FD+M  +G   +  +  ++V  +
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR GR  +A  ++   +  G  ++      L+++FC +       +A +L+E M  KG  
Sbjct: 197 CRAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMN---DEAEKLVERMTEKGLL 251

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNR 350
           P+V T    I  LC+ G   +A R+F  +         KPNV T+  M+ G+C+E  M  
Sbjct: 252 PDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEE 311

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L+E MK+ G   +  +Y + + G  + G       ++D M + G  PNIY+YN ++D
Sbjct: 312 ARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMD 371

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC+   + +A  L+       +  D +TYT LL  +  + +  +A  +   M++ G +P
Sbjct: 372 GLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP 431

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           + +   TL+ +  ++ +  E+E+  Q+           T   ++ G  R+G +  A +  
Sbjct: 432 NTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVV 491

Query: 531 QRM-----NQIG-----------------CAPDNITYGALISGLCKQSKLDEACQFYESM 568
             M     N +G                   PD ITY  LI+GLCK  KL+EA + +  M
Sbjct: 492 SEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEM 551

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
           + K + P  VT  T    +CKQG  ++A+ +L+ +++      ++T N+LI  L S+ ++
Sbjct: 552 MAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQI 611



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 212/477 (44%), Gaps = 33/477 (6%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           GN  R   V   +VSSF +     E   +V  MT  GL     T N  +   C  G V  
Sbjct: 215 GNVNRV--VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFE 272

Query: 207 AEEVFDEMCARGVCA----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           A  +F +M   G       +  ++ LM+  +C+ G + EA   +  M   G  +   +  
Sbjct: 273 ASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYN 332

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
             +      G    + +   +L+EMV  G +PN+Y++ +++DGLC+      A RL + L
Sbjct: 333 TWLLGLLRNG---KLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRL-MDL 388

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S+   P+  TYT ++ GYC + K+  A+ +L  M  +G  PNT T  +L+    K G 
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA------- 435
              A +++  M ++    +    N +++GLC+ G +++A E++ + +     +       
Sbjct: 449 KSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPV 508

Query: 436 ---------------DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
                          D ITYT L++   K  + ++A   F  M+   L+PD   Y T + 
Sbjct: 509 AGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVL 568

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            FC+Q K+  + +  ++    G   T +TY S+I G    G I         M + G  P
Sbjct: 569 NFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKG-ISPCEVTRVTLAYEYCKQGDSATA 596
           D  TY  +I+ LC+  K  +A      M+ KG +SP   +   L   +CK GD   A
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA 685



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 207/429 (48%), Gaps = 28/429 (6%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L EG S++ EM  NG+     + N V+   C   ++  A  + D M + GV  D  +Y
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTY 401

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YC  G+V EA   L+ M+ +G   +  T   L+ +   +G +    +A E+L++
Sbjct: 402 TTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS---EAEEMLQK 458

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK-----------------LVRS---- 325
           M  K ++ +  T  ++++GLC+ G  EKA  +  +                 LV S    
Sbjct: 459 MNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNV 518

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               P+V TYT +I+G CK  K+  A+     M  + L P++ TY + +   CK G    
Sbjct: 519 STNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISS 578

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  ++  M + GC+  +  YN++I GL  KG++ E Y L+ +  +R +  D  TY  +++
Sbjct: 579 ALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN 638

Query: 446 EHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
              +  +TK A  L   M+  G ++P++ ++  LI AFC+    K + + F  A++  + 
Sbjct: 639 CLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALS--VC 696

Query: 505 PTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
             KE  Y+ M    L  G +S A + F+   +      N  Y  LI  LCK  +LD+A  
Sbjct: 697 GHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHG 756

Query: 564 FYESMIGKG 572
             + +I KG
Sbjct: 757 LLQKLIDKG 765



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 144/338 (42%), Gaps = 44/338 (13%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M + G+ P T T+  LI   C+    + A +L D M ++GC PN +    ++ G C+ GR
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            ++A E +       +  +++ Y  L+S   KQ    +A  L  RM + GL PD+  + +
Sbjct: 202 TKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNS 259

Query: 478 LIAAFCRQKKMKESEKFF---------------------------QEAI----------- 499
            I+A CR  K+ E+ + F                           QE +           
Sbjct: 260 RISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETM 319

Query: 500 -TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G F + E+Y + + G LR+G +         M + G  P+  +Y  ++ GLC+   +
Sbjct: 320 KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTL 615
            +A +  + M+  G+ P  VT  TL + YC +G    A  IL  + +K       T NTL
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +  L  E R   A     K+  K   +D V+   + N 
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNG 477



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 41/324 (12%)

Query: 138 VCATSLISNGNFERAHEVMQCM-VSSFAEIGRLKE--GFSMVIEMTNNGLPLITSTLNRV 194
           +    L  NG  E+A EV+  M       +G+     G    I   +  +P + +    +
Sbjct: 473 IVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLI 532

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
            G+ C++G +E A++ F EM A+ +  D+ +Y   V+ +C+ G+++ A R L  M   G 
Sbjct: 533 NGL-CKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGC 591

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                T   LI      G +G I + + L++EM  +G  P++ T+  +I+ LC+ G T+ 
Sbjct: 592 SKTLQTYNSLILGL---GSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKD 648

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE---------------------------- 346
           A  L  +++      PNV ++  +I  +CK                              
Sbjct: 649 ATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFN 708

Query: 347 ------KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
                 K++ A+ L E   E+ LL     Y  LI   CK G  + A+ L+  +  +G   
Sbjct: 709 ELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCF 768

Query: 401 NIYAYNAIIDGLCKKGRVQEAYEL 424
           +  ++  +IDGL K+G  Q+A EL
Sbjct: 769 DHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 147/355 (41%), Gaps = 61/355 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S  + GR  E   M+ +M      L T T N VV   C  G +E A EV  EM   G
Sbjct: 439 LLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG 498

Query: 219 V----------------------CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
                                    D  +Y  ++   C++G++ EA +    M+ +    
Sbjct: 499 TNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP 558

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D+ T    +  FC +G    I  A  +L++M R G    + T+  LI GL  KG   + +
Sbjct: 559 DSVTYDTFVLNFCKQG---KISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMY 615

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL-PNTNTYTSLIY 375
            L  ++ R     P++ TY  MI+  C+  K   A  LL  M ++G++ PN +++  LI 
Sbjct: 616 GLMDEM-RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674

Query: 376 GHCKVGNFERAYDLMDLM---------------------GKEGCTPNIYA---------- 404
             CK G+F+ A +L D+                      GK      ++           
Sbjct: 675 AFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSK 734

Query: 405 ---YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              Y  +ID LCK GR+ +A+ LL+K   +    D  ++  ++    K+   +QA
Sbjct: 735 NFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQA 789



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            + + I  G+ P   T+  +I        +  A + F +M++ GC P+  T G L+ G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IR 610
           +  +  +A +F +  +G  ++   V   TL   +CKQ  +  A  ++E + +K     + 
Sbjct: 198 RAGRTKQALEFVDGKMGGNVN--RVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKL 635
           T N+ I  LC   +V  A+  F  +
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDM 280


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 207/391 (52%), Gaps = 7/391 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    VV   C+ G ++ A  + DEM   GV  +A  Y  ++  Y R         
Sbjct: 133 PLSASV---VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAE 189

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M   G      T T+L+      G    I +   + +E+ RK    +VY ++ +I+
Sbjct: 190 VLKEMESGGVEPTVGTYTILVDGLSTAG---DISKVESVFDEIKRKNVAGDVYFYSAVIN 246

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             C+ G   +A  +F + V  +  +PN  TY A+I+G+CK  ++  AEMLL  M+ +G+ 
Sbjct: 247 AYCRAGNVRRASEVFDECV-GNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVG 305

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   + ++I G+C+ G  ++A ++  +M + G   ++Y YN +  GLC+  R+++A +L
Sbjct: 306 HNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    +  ++++ ++YT L+S H K+ +  +A  LF  M   G  P +  Y  +I  + +
Sbjct: 366 LHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIK 425

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              ++E+E+F +E    GL P   TY +++ G+  +G +  A++ F+ M Q G  P+ + 
Sbjct: 426 SGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ALISGL K+ + +EA QFY++M+  G++P
Sbjct: 486 YTALISGLAKEGRSEEAFQFYDNMLAAGLTP 516



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 7/380 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           + ++++  FC  G    +  A  LL+EM R G K N   +  L+D   ++    +   + 
Sbjct: 135 SASVVVDGFCKAG---RMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEV- 190

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           LK + S   +P V TYT ++ G      +++ E + + +K + +  +   Y+++I  +C+
Sbjct: 191 LKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCR 250

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            GN  RA ++ D     G  PN   Y A+I+G CK G+++ A  LL     R +  ++I 
Sbjct: 251 AGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQII 310

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +  ++  + +     +AL +   M + G+  D++ Y TL    CR  +M++++K      
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+     +YT++I  + ++G++  A + F+ M   G  P  +TY  +I G  K   + 
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLI 616
           EA +F + M  KG+ P   T   L + +C  G    A+ + E + +   K  +     LI
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALI 490

Query: 617 RKLCSEKRVGMAALFFHKLL 636
             L  E R   A  F+  +L
Sbjct: 491 SGLAKEGRSEEAFQFYDNML 510



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 182/402 (45%), Gaps = 4/402 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F + GR+ +   ++ EM  +G+ L     N ++             EV  EM + G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y ++V      G +++ +     +  +    D    + +I A+C  G   +++
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG---NVR 255

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ +E V  G +PN  T+  LI+G CK G  E A  + L  ++      N   +  M
Sbjct: 256 RASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAA-EMLLTDMQLRGVGHNQIIFNTM 314

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC+   +++A  +   M+  G+  +  TY +L  G C+V   E A  L+ +M + G 
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N  +Y  +I    K+G + EA  L +    +  +   +TY +++  ++K    ++A  
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M K GL PD++ Y  L+   C   K+  + + F+E    G  P    YT++I G  
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++G    A +++  M   G  PD+  Y  L+  L    + DE
Sbjct: 495 KEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 4/240 (1%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC   + A + ++DG CK GR+ +A  LL +  +  ++ +   Y  LL  + +Q    + 
Sbjct: 129 GCITPLSA-SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +   M   G+ P +  YT L+        + + E  F E     +      Y+++I  
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y R GN+  A + F      G  P+  TYGALI+G CK  +++ A      M  +G+   
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 577 EVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           ++   T+   YC+ G    A+    ++E +  +L + T NTL   LC   R+  A    H
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 214/441 (48%), Gaps = 7/441 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  GLVE   ++ +     G   +A  Y +++  YCR G V      L  M  +G +   
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   L++     G +G +++   LL EM  +   PNV  +  +ID LCK     +A  +
Sbjct: 330 VTYGTLMSWL---GRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL-V 385

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            LK + +    P+  T++ +ISG C+E ++  AE LL       L PN ++YTSLI+G C
Sbjct: 386 VLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFC 445

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G    A +L+  M + G TP++  + A+I GL   G+V EA  + +K   R+L  D  
Sbjct: 446 VRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDAN 505

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y +L+S   K+     A  L   M++  ++PD + YTTLI  F R + + E+ K F+  
Sbjct: 506 IYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFM 565

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P    Y +MI GY + G ++ AV+    M ++G  PD  TY  LI G  KQ  +
Sbjct: 566 EQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---L 615
             A      M+ +   P  V   +L   YCK GD+  A  +  S++ +     V T   L
Sbjct: 626 SGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTIL 685

Query: 616 IRKLCSEKRVGMAALFFHKLL 636
           I  L  + +V  AA++F  +L
Sbjct: 686 IGSLFKKDKVVRAAMYFEYML 706



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S     G L++  S++ EM    LP      N V+   C+      A  V  +M A G
Sbjct: 335 LMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG 394

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA ++  ++   C+ GRV EA+R L          + ++ T LI  FC    RG + 
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFC---VRGEVI 451

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL EM+ +G  P+V T   LI GL   G   +A  +  K+  +    P+ + Y  +
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMA-ARQLLPDANIYNVL 510

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG CK++ +  A  L+E M EQ + P+   YT+LI G  +  + + A  + + M ++G 
Sbjct: 511 ISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGI 570

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YNA+I G C+ G + EA E +    +     D+ TYT L+  + KQ     AL 
Sbjct: 571 HPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L C M+K    P++ AY++LI  +C+      +E  F    + GLFP   TYT +I    
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLF 690

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ--SKLDEACQFYESMIGKGISPC 576
           +   +  A  YF+ M    C+P++ T  +L++GLC    S +   C    ++ GKG +  
Sbjct: 691 KKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKG-ALL 749

Query: 577 EVTRVTLAYEYCKQGDSATAMIIL 600
           ++ R  L  + C   +SA   II 
Sbjct: 750 DIFR-ALVNDRCDPRNSAYNAIIF 772



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 54/295 (18%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++F+ M  +G+  D   Y  M+  YC+ G + EA   +S M   G I D  T T 
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +  +G   +I  A  LL +M+++  +PNV  ++ LI+G CK G T+ A  LF  + 
Sbjct: 615 LIGGYAKQG---NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSM- 670

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM------------------------- 358
            S    PNV TYT +I    K++K+ RA M  E M                         
Sbjct: 671 ESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMAS 730

Query: 359 ------------KEQGLL-------------PNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
                         +G L             P  + Y ++I+  C       A DL + M
Sbjct: 731 IISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKM 790

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
             +G  P+   + +++ G C  G+ +E   +L   FQR+       Y IL  +++
Sbjct: 791 ANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQYV 845



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 147/329 (44%), Gaps = 8/329 (2%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIYGHCKVGNFERAYD 388
           P      A+++ Y       +A  + +R +E  G LP       L+    +   ++ A  
Sbjct: 186 PTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARK 245

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L D M  E    + Y+   ++ GLC +G V++  +L++  +      + + Y +L+  + 
Sbjct: 246 LYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYC 305

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           ++ +  + + L   M   GL P +  Y TL++   R+  +++      E     L P  +
Sbjct: 306 RRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQ 365

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y S+I    +  + S A+   ++M   GC PD IT+  LISGLC++ ++ EA +     
Sbjct: 366 IYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRET 425

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLW--IRTVNTLIRKLCSEKRV 625
               ++P   +  +L + +C +G+   A  +++E +++     + T   LI  L    +V
Sbjct: 426 TRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQV 485

Query: 626 GMAALFFHKLLGK----DQNVDRVSLAAL 650
             A L   K+  +    D N+  V ++ L
Sbjct: 486 SEALLVREKMAARQLLPDANIYNVLISGL 514


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 210/430 (48%), Gaps = 23/430 (5%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G ++ A  +  +M    V  DA +Y  ++   C  GR + A   L  M  
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG + D  T T+L+ A C    R   KQA +LL+EM  KG  P++ T+ V+++G+C++G 
Sbjct: 195 RGCLPDVVTYTILLEATCK---RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A   FLK + S   +PN  +Y  ++ G    E+   AE L+E M  +G  PN  T+ 
Sbjct: 252 VEDAME-FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A ++++ M + GCTPN  +YN ++   CK+ ++ +A E ++    R
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D ++Y  LL+   +  E   A+ L  ++   G +P + +Y T+I    +  K KE+
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +   E  + GL P   TY+++  G  R+  I  AV+ F ++  +G  P    Y A++ G
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK+ +   A   +  MI  G  P E                +T  I++E L  +  ++ 
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNE----------------STYTILVEGLAYEGLVKE 534

Query: 612 VNTLIRKLCS 621
              L  +LCS
Sbjct: 535 ARELFAQLCS 544



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 11/363 (3%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V  +  ++ G C  G  + A RL   +      +P+ +TY  +I G C   + + A  
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM----PVEPDAYTYNTLIRGLCGRGRTSNALA 187

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +LE M  +G LP+  TYT L+   CK   +++A  L+D M  +GC P+I  YN +++G+C
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++GRV++A E LK       + + ++Y I+L         + A  L   M   G  P++ 
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            +  LI+  CR+  ++ + +  ++    G  P   +Y  ++  + +   I  A+++ + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              GC PD ++Y  L++ LC+  ++D A +    +  KG SP  ++  T+     K G +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A+ +L+ +  K     I T +T+   LC E R+  A   F K+    Q++     AAL
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV----QDMGIRPTAAL 483

Query: 651 KNA 653
            NA
Sbjct: 484 YNA 486



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 4/338 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           K+   ++ EM + G      T N V+   C+ G VE A E    + + G   +  SY ++
Sbjct: 218 KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIV 277

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +       R  +A++ +  M  +G   +  T  +LI+  C +G    ++ A E+LE+M +
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGL---VEPAMEVLEQMPQ 334

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  PN  ++  L+   CK+    KA   F++L+ S    P++ +Y  +++  C+  +++
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAME-FVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  LL ++K++G  P   +Y ++I G  K G  + A +L+D M  +G  P+I  Y+ I 
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC++ R++EA     K     ++     Y  +L    K+ ET  A+ LF  M+ +G  
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           P+   YT L+     +  +KE+ + F +  + G+   K
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKK 551



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 140/271 (51%), Gaps = 4/271 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R ++   ++ EM + G P    T N ++   C  GLVE A EV ++M   G   ++ SY 
Sbjct: 286 RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYN 345

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++ A+C+  ++ +A  ++  M+ RG   D  +   L+TA C  G    +  A ELL ++
Sbjct: 346 PLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNG---EVDVAIELLHQL 402

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             KG  P + ++  +IDGL K G T++A  L  ++  S   +P++ TY+ + SG C+E++
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT-SKGLQPDIITYSTIASGLCREDR 461

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A     ++++ G+ P    Y +++ G CK      A DL   M   GC PN   Y  
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           +++GL  +G V+EA EL  +   R +   K+
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRGVVNKKL 552



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 3/142 (2%)

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           R V A   PD+  Y  ++A +C   ++  + +   +       P   TY ++I G    G
Sbjct: 124 RRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRG 180

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             S+A+   + M + GC PD +TY  L+   CK+S   +A +  + M  KG +P  VT  
Sbjct: 181 RTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYN 240

Query: 582 TLAYEYCKQGDSATAMIILESL 603
            +    C++G    AM  L++L
Sbjct: 241 VVLNGICQEGRVEDAMEFLKNL 262


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 215/421 (51%), Gaps = 11/421 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL---PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++  F+  G L     ++ EM ++G     ++ +TL + +   C+ G V  A E F  M 
Sbjct: 63  LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGL---CDAGRVVEALEHFRAM- 118

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+    D  +Y  +V A C+ G+  EA   L  M+ +G   D  T + LI   C     G
Sbjct: 119 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK---FG 175

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           S +QAF +LE+++++G   +      +I  LC K  + +     L +V +  + P V  +
Sbjct: 176 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 235

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+G+CK + ++ A  LLE M E+G +PN  T+T LI G CK      A  L++ M  
Sbjct: 236 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC+PN+  Y+ +I+GLCK+G+V +AYEL +   +R    + +T+ IL+    K    ++
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE-TYTSMI 514
           A  L+ RM + G  PDI  Y +LI   C+  ++ E+ + FQ    +G+      TY+++ 
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   G ++ A + F  +   G +PD  TY +LI   CK S+  E  +  E M  KG  
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 575 P 575
           P
Sbjct: 476 P 476



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 204/416 (49%), Gaps = 7/416 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A ++ +EM + G   +A  +  ++   C  GRV EA     AM  +    D  T 
Sbjct: 71  GDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTY 129

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           T L+ A C  G      +A  +L EMV +G  P+  T + LIDGLCK G  E+AFR+   
Sbjct: 130 TALVHALCKAG---KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 186

Query: 322 LVRSDNYKPNVHTYTAMISGYC-KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++      +   +  +I   C K   +  A  +L  +  +G  P    +  +I G CK 
Sbjct: 187 VIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 245

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
            + + AY L+++M ++GC PN++ +  +I GLCK  RV EA +LL+K        + +TY
Sbjct: 246 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTY 305

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + +++   KQ +   A  LF  M +    P++  +  LI   C+ K+++E+ + +     
Sbjct: 306 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 365

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN-ITYGALISGLCKQSKLD 559
            G  P   TY S+I G  +   +  A + FQ + + G +  N +TY  L  G     ++ 
Sbjct: 366 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 425

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
           +AC+ +  ++ KG SP   T  +L  EYCK   +   + ++E +  K +   VNTL
Sbjct: 426 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 10/422 (2%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR+ R  EA       + R  + +  T  +LI  F   G    +  A +LLEEM   G++
Sbjct: 33  CRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAG---DLDIAIQLLEEMKSSGFE 89

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            N   HT L+ GLC  G   +A   F  + +  +  P+V TYTA++   CK  K + A+ 
Sbjct: 90  GNAVVHTTLMKGLCDAGRVVEALEHFRAMAK--DCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L  M  QG  P+T T+++LI G CK G+ E+A+ +++ + + G   +  A+  II  LC
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 207

Query: 414 KK-GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            K   V+ A ++L     +      + + ++++   K  +   A  L   M++ G  P++
Sbjct: 208 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 267

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +T LI   C+  ++ E+++  ++ +  G  P   TY+++I G  + G +  A + FQ 
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--Q 590
           M +  C P+ +T+  LI GLCK  +++EA Q Y  M   G +P  +T  +L    CK  Q
Sbjct: 328 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387

Query: 591 GDSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
            D A  +   I ES        T +TL     +  R+  A   F  L+ K  + D  +  
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447

Query: 649 AL 650
           +L
Sbjct: 448 SL 449



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 211/508 (41%), Gaps = 82/508 (16%)

Query: 147 GNFERAHE-VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           GN + A E ++Q + + +  +    +   +VI     G        N V+   C+   ++
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIA---KGFTPTVLMFNLVINGFCKAKDLD 249

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A ++ + M  +G   +  ++ +++   C+  RV EA + L  M+  G   +  T + +I
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVI 309

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C +G    +  A+EL + M R+   PNV TH +LIDGLCK    E+A +L+ ++ R 
Sbjct: 310 NGLCKQG---QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM-RE 365

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE------------------------- 360
               P++ TY ++I G CK  +++ A  L + + E                         
Sbjct: 366 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 425

Query: 361 -----------QGLLPNTNTYTSLIYGHCKV----------------------------- 380
                      +G  P+  TYTSLI  +CK                              
Sbjct: 426 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485

Query: 381 -----GNF-ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ---R 431
                GN  ERA  L D M   GCT +   YN +++G+ +  +  +A  +L++      R
Sbjct: 486 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDR 545

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           +          L+    +  +T  A  L  +M + G    + +Y  L++   R ++  E+
Sbjct: 546 KFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEA 605

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            + F+  ++AG  P   T   +I        +  A +  QRM+++GC PD  T   LI G
Sbjct: 606 TQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 665

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVT 579
            CK  + D A +  E M   G+ P + T
Sbjct: 666 YCKSGRADLARKLLEEMTEAGLEPNDTT 693



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 153/357 (42%), Gaps = 41/357 (11%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           LF    RS     NV +    +   C+  +   A  L      +  +PN  TY  LI G 
Sbjct: 9   LFFDWARS-RVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGF 67

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
              G+ + A  L++ M   G   N   +  ++ GLC  GRV EA E   +A  ++   D 
Sbjct: 68  SSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDV 126

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------- 484
           +TYT L+    K  +  +A G+   MV  G  PD   ++TLI   C+             
Sbjct: 127 MTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 186

Query: 485 --QKKMKESEKFFQE---------------------AITAGLFPTKETYTSMICGYLRDG 521
             Q+ M  S+  F+                       I  G  PT   +  +I G+ +  
Sbjct: 187 VIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAK 246

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           ++ SA K  + M + GC P+  T+  LI+GLCK +++ EA Q  E M+  G SP  VT  
Sbjct: 247 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYS 306

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T+    CKQG    A  + + ++++     + T N LI  LC  KR+  A   +H++
Sbjct: 307 TVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 23/399 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y      L   G  + A+E+ Q M               +    +  R++E   +   M 
Sbjct: 305 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRV 239
             G      T N ++   C+   V+ A ++F  +   GV  A+A +Y  +   Y  +GR+
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A R  S ++D+G   D AT T LI  +C K  R        L+EEM  KG+ P V T 
Sbjct: 425 ADACRIFSMLVDKGFSPDLATYTSLILEYC-KTSRAVEVVE--LVEEMASKGFPPRVNTL 481

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM- 358
           + ++ GL +   TE+A +LF  +  +     +   Y  ++ G  +  K ++A  +LE++ 
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMA-ARGCTDDALIYNLVVEGMARASKHDKALAVLEQVI 540

Query: 359 --KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             +++   P+++   +L+   C+VG  + A  L+  M + G    + +YN ++ GL +  
Sbjct: 541 DKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQ 600

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R  EA ++ +         +  T  +++S     A+   A  L  RM K G  PDI    
Sbjct: 601 RWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCN 660

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           TLI  +C+  +   + K  +E   AGL P   T+  + C
Sbjct: 661 TLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 44/312 (14%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+++ N  +D LC+  R QEA  L + A  R    +K TY IL+       +   A+ L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M  +G   +   +TTL+   C   ++ E+ + F+ A+     P   TYT+++    + 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFR-AMAKDCAPDVMTYTALVHALCKA 139

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA------------------- 561
           G    A    + M   GCAPD +T+  LI GLCK    ++A                   
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 562 -------CQFYES----------MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
                  C  Y S          +I KG +P  +    +   +CK  D  +A  +LE + 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 605 KKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---S 657
           +K  +  V T   LI  LC   RVG A     K++    + + V+ + + N  C +    
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319

Query: 658 NKYALFSDLSQR 669
           + Y LF  + +R
Sbjct: 320 DAYELFQLMERR 331


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 226/447 (50%), Gaps = 19/447 (4%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGR---------LKEGFSMVI------EMTNNGLPLIT 188
           + N  FE   +V   MV +  +I           LK    MV+      +M    + +  
Sbjct: 156 VDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTV 215

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
            ++  V+   C+ G VE A+++  EM  +G+  +  +Y  +V AY ++      +  L  
Sbjct: 216 YSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRL 275

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M     + + AT TLLI  +   G  G I +A ++ E+M+ +G + +++  T +I   CK
Sbjct: 276 MEMDKVVYNAATYTLLIEWY---GSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCK 332

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  ++AF LF +L        N HTY A+I G C   +++ AEML+  M+ QGL  N  
Sbjct: 333 LGNMKRAFALFDEL-NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLV 391

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            + +LI G+CK G  + A  + D+M K+G   +I+ YN I  GLCK  R +EA   L   
Sbjct: 392 IFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTM 451

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ +  + +++TI++  H K+    +A  +F  M K G  P++  Y TLI  + ++ K+
Sbjct: 452 VEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKL 511

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           KE+ +   E  + G+     TYT+++ G    G +  A+     + + G A   +TY A+
Sbjct: 512 KEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAI 571

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISP 575
           ISGL K+ + +EA + Y+ M+  G++P
Sbjct: 572 ISGLSKEGRSEEAFRLYDEMMAAGLTP 598



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 15/442 (3%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           + E   +VFD M   G+  D  S  + ++A  R  ++  +  +   M++    +   ++T
Sbjct: 160 MFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMT 219

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK----KGWTEKAFRL 318
           ++I   C KG    +++A +L+ EM  KG KPNV T+  L++   K    +G  E     
Sbjct: 220 IVIDGLCKKG---RVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNE----- 271

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L+L+  D    N  TYT +I  Y    K+  AE + E+M E+G+  + + +TS+I   C
Sbjct: 272 MLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQC 331

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+GN +RA+ L D + + G   N + Y A+I G C  G++  A  L+ +   + L  + +
Sbjct: 332 KLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLV 391

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            +  L++ + K+    +AL +   M K G   DI  Y T+    C+  + +E++++    
Sbjct: 392 IFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTM 451

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P   ++T MI  + ++GN+  A + FQ M + G  P+ +TY  LI G  K+ KL
Sbjct: 452 VEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKL 511

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTL 615
            EA +  + M   G++    T  TL +  C  G    A+ +L  + +K   + I T   +
Sbjct: 512 KEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAI 571

Query: 616 IRKLCSEKRVGMAALFFHKLLG 637
           I  L  E R   A   + +++ 
Sbjct: 572 ISGLSKEGRSEEAFRLYDEMMA 593



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           M  ++    + GR++    +++EMT  G+     T N +V    ++   E   E+   M 
Sbjct: 218 MTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLME 277

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
              V  +A++Y L++  Y   G++ EA++    ML+RG   D    T +I+  C     G
Sbjct: 278 MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCK---LG 334

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++K+AF L +E+  +G   N +T+  LI G C  G  + A  + +  ++S     N+  +
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAA-EMLVNEMQSQGLDMNLVIF 393

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+GYCK+  ++ A  + + M+++G   +  TY ++  G CK+   E A   +  M +
Sbjct: 394 NTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVE 453

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  PN  ++  +ID  CK+G + EA  + +   ++  + + +TY  L+  + K+ + K+
Sbjct: 454 KGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKE 513

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L   M   G+  DI+ YTTL+   C   K++E+     E    GL  +  TYT++I 
Sbjct: 514 AYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIIS 573

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           G  ++G    A + +  M   G  PD+  Y +L++ L K
Sbjct: 574 GLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 243/521 (46%), Gaps = 9/521 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +I NG F+  +    C++  +  IG+ KE   M+ EM+  GL     T   ++   C+ G
Sbjct: 260 MIDNG-FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG 318

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
               A   FD M  +G+    S+Y +++  Y   G ++E   +L  M++ G   D+    
Sbjct: 319 RCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +  +A+   G    I +A ++  +M + G  PNV  +  LID LCK G  + A   F ++
Sbjct: 379 IFFSAYAKCGM---IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + ++   PN+  + +++ G C  +K  RAE L+  M +QG+ PN   + +LI   C VG 
Sbjct: 436 I-NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
                 L+DLM   G  P+ ++Y  +I G C  GR  EA ++        L   ++TY  
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           LL  +   +    A  LF  M++ G+ P +  Y T++    + K+  E+++ +   I +G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
                 TY  ++ G  +   +  A K FQ +   G   + IT+  +I  L K  + ++A 
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKL 619
             + ++   G+ P  VT   +A    ++G       +  +++K       + +N L+R+L
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
                +  A  +  KL  ++ +V+  S  +L  + + S++Y
Sbjct: 735 LHRGDISRAGAYLSKLDERNFSVE-ASTTSLLMSIFTSDEY 774



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 39/491 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G++ + +++ +EM + G+P    T   V+   C+  L + AE VF +M   G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  Y  +G+  E  + L  M  RG   D  T   L+   C  G     +
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG---RCR 321

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG---------------------------- 310
           +A    + M+RKG KP V T+ +LI G   KG                            
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 311 -------WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                    +KA  +F K+ R     PNV  Y A+I   CK  +++ AE+   +M  +G+
Sbjct: 382 SAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   + SL+YG C V  +ERA +L+  M  +G  PN   +N +I  LC  GRV E   
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR 500

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+       ++ D  +YT L+S +     T +A  +F  MV  GL+P    Y TL+  +C
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              ++ ++   F+E +  G+ P   TY +++ G  +    S A + +  M   G   D  
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 620

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +++GLCK + +DEA + ++S+  KG+    +T   +     K G    AM +  ++
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680

Query: 604 DKKLWIRTVNT 614
                +  V T
Sbjct: 681 PANGLVPNVVT 691



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 14/431 (3%)

Query: 205 EYAEEVFDEM---CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           E A   F+ M   C+  V  +  +Y +++  +CRMG +         +L  G  +D+  +
Sbjct: 69  ELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAI 128

Query: 262 TLLITAFCDKGFRGSIKQAFE-LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             L+   C  G R  + +A + LL+ M   G  P+  ++T+L+ GLC +   E+A  L L
Sbjct: 129 NQLLKGLC-HGKR--VGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALEL-L 184

Query: 321 KLVRSDNYK---PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            ++  D+ +   PNV +Y+ +I+G+  E ++++   L   M ++G+ P+  TYT++I G 
Sbjct: 185 HMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGL 244

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK   F+RA  +   M   G  PN Y YN +I G    G+ +E  ++L++   R L+ D 
Sbjct: 245 CKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDC 304

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  LL+   K    ++A   F  M++ G+ P +  Y  LI  +  +  + E   F   
Sbjct: 305 YTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDL 364

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL P    +      Y + G I  A+  F +M Q G +P+ + YGALI  LCK  +
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRTV--NT 614
           +D+A   +  MI +G++P  V   +L Y  C       A  ++ E LD+ +    V  NT
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484

Query: 615 LIRKLCSEKRV 625
           LI  LC+  RV
Sbjct: 485 LICNLCNVGRV 495



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 231/542 (42%), Gaps = 46/542 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCAR 217
           ++  F  +G L+ GF+    +   G  +    +N+++   C    V  A +V    M   
Sbjct: 96  LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD---RGAILDNATLTLLITAFCDKGFR 274
           G   D  SY +++   C   R  EA   L  M D   R    +  + +++I  F  +G  
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEG-- 213

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + + + L  EM+ +G  P+V T+T +IDGLCK    ++A  +F +++  + +KPN +T
Sbjct: 214 -QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI-DNGFKPNNYT 271

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GY    K      +LE M  +GL P+  TY SL+   CK G    A    D M 
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  P +  Y  +I G   KG + E +  L    +  L  D   + I  S + K     
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM- 513
           +A+ +F +M + GL+P++  Y  LI A C+  ++ ++E  F + I  G+ P    + S+ 
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451

Query: 514 ----------------------------------ICGYLRDGNISSAVKYFQRMNQIGCA 539
                                             IC     G +    +    M  +G  
Sbjct: 452 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 511

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD  +Y  LISG C   + DEA + ++ M+  G+SP EVT  TL + YC       A  +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
              + +K     + T NT++  L   KR   A   +  ++      D  +   + N   +
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 657 SN 658
           SN
Sbjct: 632 SN 633


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 232/495 (46%), Gaps = 8/495 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L+    +V E++ +GL     T + ++   C+ G +E A E + EM  +G+ +   S 
Sbjct: 277 GNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSL 336

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  Y +      A    +  L+ G + +  T   L++  C +G    + +A  L +E
Sbjct: 337 NSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEG---KMNEACNLWDE 392

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           ++ KG  PNV ++  +I G C+K     A +++ +++  + + PN  T+T ++ GY K+ 
Sbjct: 393 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML-DNGFTPNAVTFTILMDGYFKKG 451

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  +  RMK+  +LP   T   +I G CK G      DL +    +G  P    YN
Sbjct: 452 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 511

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            IIDG  K+G +  A  + ++  +  +    +TYT L+    K      AL L   M + 
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL  DI AY TLI  FC+++ MK + +   E   AGL P +  Y SMI G+    N+  A
Sbjct: 572 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 631

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +  +++M   G   D  TY +LI GL K  +L  A   +  M+ KGI P +     L   
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691

Query: 587 YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C +G    A  ILE ++ K  I +V   NTLI     E  +  A     ++L +    D
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751

Query: 644 RVSLAALKNACYESN 658
            ++   L N  ++ +
Sbjct: 752 NITYDILVNGKFKGD 766



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 40/437 (9%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYC--------------------------- 234
           G +  AE+ F +  ARGV  D  +Y + V   C                           
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 235 --------RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
                   + G V EA R    M++ G  ++ A  T L+  +C    +G+++ A  L+ E
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC---MQGNLRSALVLVNE 288

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  T++VLIDG CK G  EKAF  + ++ ++   + +V++  +++ GY K +
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQ 347

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A  +     E G L N  T+ +L+   CK G    A +L D +  +G +PN+ +YN
Sbjct: 348 SWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            II G C+K  +  A ++ K+        + +T+TIL+  + K+ + + A  +F RM  A
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P       +I   C+  +  E    F + ++ G  PT   Y ++I G++++GNI+ A
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              ++ M ++G  P  +TY +LI G CK + +D A +    M  KG+        TL   
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 586

Query: 587 YCKQGDSATAMIILESL 603
           +CK+ D  +A  +L  L
Sbjct: 587 FCKRRDMKSAHELLNEL 603



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 196/429 (45%), Gaps = 9/429 (2%)

Query: 151 RAHEVMQCMVSSFAEIGRLKE----GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           R  E+ Q   S F  +  LK       S++ EM   G      T   V+    + G V  
Sbjct: 187 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 246

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + D+M   G   + +    ++  YC  G +  A   ++ + + G + +  T ++LI 
Sbjct: 247 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C     G+I++AFE   EM  KG + +VY+   +++G  K    + AF +F   + S 
Sbjct: 307 GCCK---NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 363

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
               NV T+  ++S  CKE KMN A  L + +  +G+ PN  +Y ++I GHC+  N   A
Sbjct: 364 --LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA 421

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +   M   G TPN   +  ++DG  KKG ++ A+ +  +     +     T  I++  
Sbjct: 422 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 481

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K   + +   LF + V  G  P    Y T+I  F ++  +  +   ++E    G+ P+
Sbjct: 482 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 541

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TYTS+I G+ +  NI  A+K    M + G   D   YG LI G CK+  +  A +   
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601

Query: 567 SMIGKGISP 575
            + G G+SP
Sbjct: 602 ELRGAGLSP 610



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G+I +A +   +   +G + +   +++ +  LC K  +  A  L L+ +R+  + P   
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSL-LREMRAAGWIPPEG 229

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+T++I+   KE  +  A  L + M   G   N    TSL+ G+C  GN   A  L++ +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + G  PN   Y+ +IDG CK G +++A+E   +   + +++   +   +L  +LK    
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  +F   +++GL  ++  + TL++  C++ KM E+   + E I  G+ P   +Y ++
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G+ R  NI++A K ++ M   G  P+ +T+  L+ G  K+  ++ A   +  M    I
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAAL 630
            P + T   +    CK G S     +      + ++ T    NT+I     E  + +A+ 
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 631 FFHKL 635
            + ++
Sbjct: 529 VYREM 533



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN  +D   ++G + EA +   +A  R ++ D+  Y+I +     +  +  AL L   M 
Sbjct: 163 YNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMR 220

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            AG  P    +T++I A  ++  + E+ +   + +  G        TS++ GY   GN+ 
Sbjct: 221 AAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 280

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI--SPCEVTRVT 582
           SA+     +++ G  P+ +TY  LI G CK   +++A +FY  M  KGI  S   +  + 
Sbjct: 281 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 340

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             Y  C+   +A  M   ++L+  L  + T NTL+  LC E ++  A   + +++ K  +
Sbjct: 341 EGYLKCQSWQNAFTMFN-DALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 399

Query: 642 VDRVS 646
            + VS
Sbjct: 400 PNVVS 404


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 236/507 (46%), Gaps = 8/507 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +   G L+    +V E++ +GL     T + ++   C+ G +E A E + EM
Sbjct: 147 VATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEM 206

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G+ +   S   ++  Y +      A    +  L+ G + +  T   L++  C +G  
Sbjct: 207 KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEG-- 263

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +A  L +E++ KG  PNV ++  +I G C+K     A +++ +++  + + PN  T
Sbjct: 264 -KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML-DNGFTPNAVT 321

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +T ++ GY K+  +  A  +  RMK+  +LP   T   +I G CK G      DL +   
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 381

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  P    YN IIDG  K+G +  A  + ++  +  +    +TYT L+    K     
Sbjct: 382 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 441

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M + GL  DI AY TLI  FC+++ MK + +   E   AGL P +  Y SMI
Sbjct: 442 LALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMI 501

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+    N+  A+  +++M   G   D  TY +LI GL K  +L  A   +  M+ KGI 
Sbjct: 502 TGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGIL 561

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P +     L    C +G    A  ILE ++ K  I +V   NTLI     E  +  A   
Sbjct: 562 PDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRL 621

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESN 658
             ++L +    D ++   L N  ++ +
Sbjct: 622 HDEMLDRGLVPDNITYDILVNGKFKGD 648



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 227/507 (44%), Gaps = 44/507 (8%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ ++M   GV  D  +  +M+ A  + G + EA++       RG  LD    ++ + 
Sbjct: 24  ARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVH 83

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C K   G    A  LL EM   GW P   T T +I    K+G   +A RL   +V   
Sbjct: 84  LLCLKPNSG---YALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCG 140

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
               N+   T+++ GYC +  +  A +L+  + E GL+PN  TY+ LI G CK GN E+A
Sbjct: 141 K-SMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKA 199

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           ++    M  +G   ++Y+ N+I++G  K    Q A+ +   A +  L A+  T+  LLS 
Sbjct: 200 FEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSW 258

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+ +  +A  L+  ++  G++P++ +Y  +I   CR+  +  + K ++E +  G  P 
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 318

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC------------- 553
             T+T ++ GY + G+I +A   F RM      P + T G +I GLC             
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378

Query: 554 ----------------------KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
                                 K+  ++ A   Y  M   GI+P  VT  +L   +CK  
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438

Query: 592 DSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
           +   A+ +L  + +   K+ I+   TLI   C  + +  A    ++L G   + +R    
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 649 ALKNACYESNKYALFSDLSQR-IAEGI 674
           ++       N      DL ++ + EGI
Sbjct: 499 SMITGFKNMNNVEEAIDLYKKMVNEGI 525



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 40/437 (9%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYC--------------------------- 234
           G +  AE+ F +  ARGV  D  +Y + V   C                           
Sbjct: 54  GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 113

Query: 235 --------RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
                   + G V EA R    M++ G  ++ A  T L+  +C    +G+++ A  L+ E
Sbjct: 114 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC---MQGNLRSALVLVNE 170

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  T++VLIDG CK G  EKAF  + ++ ++   + +V++  +++ GY K +
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQ 229

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A  +     E G L N  T+ +L+   CK G    A +L D +  +G +PN+ +YN
Sbjct: 230 SWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            II G C+K  +  A ++ K+        + +T+TIL+  + K+ + + A  +F RM  A
Sbjct: 289 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + P       +I   C+  +  E    F + ++ G  PT   Y ++I G++++GNI+ A
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              ++ M ++G  P  +TY +LI G CK + +D A +    M  KG+        TL   
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468

Query: 587 YCKQGDSATAMIILESL 603
           +CK+ D  +A  +L  L
Sbjct: 469 FCKRRDMKSAHELLNEL 485



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 5/403 (1%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S++ EM   G      T   V+    + G V  A  + D+M   G   + +    ++  
Sbjct: 95  LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC  G +  A   ++ + + G + +  T ++LI   C     G+I++AFE   EM  KG 
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCK---NGNIEKAFEFYSEMKTKGI 211

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           + +VY+   +++G  K    + AF +F   + S     NV T+  ++S  CKE KMN A 
Sbjct: 212 RSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG--LANVFTFNTLLSWLCKEGKMNEAC 269

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            L + +  +G+ PN  +Y ++I GHC+  N   A  +   M   G TPN   +  ++DG 
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            KKG ++ A+ +  +     +     T  I++    K   + +   LF + V  G  P  
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y T+I  F ++  +  +   ++E    G+ P+  TYTS+I G+ +  NI  A+K    
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           M + G   D   YG LI G CK+  +  A +    + G G+SP
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 492



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 39/286 (13%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+I   N ++  + +K    EA EL  K     +  D  T  ++L   LK+    +A  
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F +    G+  D  AY+  +   C +     +    +E   AG  P + T+TS+I   +
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 519 RDGNISSAVKYFQRM--------------------------------NQI---GCAPDNI 543
           ++GN++ A++    M                                N+I   G  P+ +
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGI--SPCEVTRVTLAYEYCKQGDSATAMIILE 601
           TY  LI G CK   +++A +FY  M  KGI  S   +  +   Y  C+   +A  M   +
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFN-D 240

Query: 602 SLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +L+  L  + T NTL+  LC E ++  A   + +++ K  + + VS
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 3/190 (1%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P I     L+ A  R+    E+ +   + +  G+     T   M+   L++GNI  A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           ++F +    G   D   Y   +  LC +     A      M   G  P E T  ++    
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 588 CKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
            K+G+ A A+ + + +    K + +    +L++  C +  +  A +  +++       ++
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 645 VSLAALKNAC 654
           V+ + L + C
Sbjct: 181 VTYSVLIDGC 190


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 236/482 (48%), Gaps = 17/482 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  E GR  E  S+  EM   G      T   ++   C+ G ++ A ++ +EM  +G
Sbjct: 296 LVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG 355

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SI 277
           V      +  ++ +YC+ G + +A   L  M  +    +  T   LI  FC    RG S+
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFC----RGKSM 411

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  LL +MV     P+V T+  LI GLC+ G  + A RLF  ++R D + P+  T+ A
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIR-DGFSPDQWTFNA 470

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            +   C+  ++  A  +LE +KE+ +  N + YT+LI G+CK G  E A  L   M  E 
Sbjct: 471 FMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE 530

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN   +N +IDGL K+G+VQ+A  L++   + +++    TY IL+ E LK+ +  +A 
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRAN 590

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +  R++ +G  P++  YT  I A+C Q +++E+E+   +    G+      Y  +I  Y
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY 650

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G + SA    +RM   GC P  +TY  L+  L  +    E      + +G  +S   
Sbjct: 651 GCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG----SNPVGLDVS--- 703

Query: 578 VTRVTL-AYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFH 633
           +T +++   +   + D     ++ E + +   +  +NT   LI  LC   R+ +A   +H
Sbjct: 704 LTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYH 763

Query: 634 KL 635
            +
Sbjct: 764 HM 765



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 218/468 (46%), Gaps = 25/468 (5%)

Query: 173 FSMVIEM--------TNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEM--CARGVC 220
           FSMV EM        T+NG  +  +  TLN ++   C+LG +  A   F  +  C  G  
Sbjct: 164 FSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPG-- 221

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            D  +Y  +V+ YCR   V  A      M  R A+    + T LI   C+ G    + +A
Sbjct: 222 PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNLIHGLCEAG---KLHEA 274

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            E    M   G  P V T+TVL+  LC+ G   +A  LF ++ R    +PNV+TYT +I 
Sbjct: 275 LEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM-RERGCEPNVYTYTVLID 333

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
             CKE +M+ A  +L  M E+G+ P+   + +LI  +CK G  E A  ++ LM  +   P
Sbjct: 334 YLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCP 393

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  YN +I G C+   +  A  LL K  + +L  D +TY  L+    +      A  LF
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLF 453

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M++ G +PD   +   +   CR  ++ E+ +  +      +   +  YT++I GY + 
Sbjct: 454 RLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G I  A   F+RM    C P++IT+  +I GL K+ K+ +A    E M    + P   T 
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTY 573

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
             L  E  K+ D   A  IL  L    +   + T    I+  CS+ R+
Sbjct: 574 NILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 197/425 (46%), Gaps = 20/425 (4%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAML-DRG-AILDN-ATLTLLITAFCDKGFRGSIKQA 280
           +SY  +++   R   V E       ML D G ++  N  TL  ++ ++C     G++  A
Sbjct: 152 TSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCK---LGNMAVA 208

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
                 ++R    P+++T+T L+ G C+    E+A  +F  + R      N  +YT +I 
Sbjct: 209 RLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR-----NAVSYTNLIH 263

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G C+  K++ A     RM+E G  P   TYT L+   C+ G    A  L   M + GC P
Sbjct: 264 GLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEP 323

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+Y Y  +ID LCK+GR+ EA ++L +  ++ +    + +  L+  + K+   + A+G+ 
Sbjct: 324 NVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVL 383

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M    + P++  Y  LI  FCR K M  +     + + + L P   TY ++I G    
Sbjct: 384 GLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEV 443

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G + SA + F+ M + G +PD  T+ A +  LC+  ++ EA Q  ES+  K +   E   
Sbjct: 444 GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY 503

Query: 581 VTLAYEYCKQGDSATA------MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
             L   YCK G    A      M+  E L   +   T N +I  L  E +V  A L    
Sbjct: 504 TALIDGYCKAGKIEHAASLFKRMLAEECLPNSI---TFNVMIDGLRKEGKVQDAMLLVED 560

Query: 635 LLGKD 639
           +   D
Sbjct: 561 MAKFD 565



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 191/490 (38%), Gaps = 97/490 (19%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F     +    +++ +M  + L     T N ++   CE+G+V+ A  +F  M   G
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
              D  ++   +V  CRMGRV EA + L ++ ++    +    T LI  +C  G      
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520

Query: 273 --FR------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             F+                        G ++ A  L+E+M +   KP ++T+ +L++ +
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML------------ 354
            K+   ++A  +  +L+ S  Y+PNV TYTA I  YC + ++  AE +            
Sbjct: 581 LKEYDFDRANEILNRLI-SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLD 639

Query: 355 -----------------------LERMKEQGLLPNTNTYTSL-----IYGHCKVGNFERA 386
                                  L RM   G  P+  TY+ L     I  H K G+    
Sbjct: 640 SFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVG 699

Query: 387 YD------------------------LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            D                        L + M + GC PN+  Y+ +I+GLCK GR+  A+
Sbjct: 700 LDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAF 759

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L     +  +   +I +  LLS   K     +A+ L   M++      + +Y  LI   
Sbjct: 760 SLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGL 819

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
             Q   +++E  F   +  G    +  +  +I G  + G +    +    M + GC    
Sbjct: 820 FEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHP 879

Query: 543 ITYGALISGL 552
            TY  L+  L
Sbjct: 880 ETYSMLMQEL 889


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 191/379 (50%), Gaps = 4/379 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G V    E+  +M   GV  +   Y +++ A CR G + +A    S M D G   + 
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQ 177

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              T++I  F  KG++   K  FEL ++M   G  PN+YT+  LI   C+ G    AF++
Sbjct: 178 YIYTIMINGFFKKGYK---KDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKV 234

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ +      N  TY  +I G C++ ++++AE LLERMK   + P T T+  L+ G C
Sbjct: 235 FDEISKR-GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  ++A   ++ +   G  P +  YN +I G  K G      EL+++   R +   K+
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL++  ++  + ++A  +F  M + GL PD H Y  LI   C +  M E+ K ++  
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +   L P    Y +MI GY ++ N   A+K+ + M + G  P+  +Y + I  LCK  K 
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKS 473

Query: 559 DEACQFYESMIGKGISPCE 577
            EA +  + M   G+ P E
Sbjct: 474 IEAKRLLKEMTEAGLKPPE 492



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 205/412 (49%), Gaps = 5/412 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+  + +  L+E + + F  M  +G    + S+   +    + G +     + +  L R 
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  +  + I AFC+    G++ + FELL +M   G  PNV+ +T+LI+  C+ G  +
Sbjct: 104 Q-FDVYSFGITIKAFCE---NGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDID 159

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  +F ++        N + YT MI+G+ K+        L ++MK  G+LPN  TY SL
Sbjct: 160 QAKVMFSRM-DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  +C+ G    A+ + D + K G   N   YN +I GLC+KG+V +A  LL++  +  +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                T+ +L+       +  +AL    ++   GL P +  Y  LI+ F +        +
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    G+ P+K TYT ++  ++R  +I  A + F  M +IG  PD  TYG LI GLC
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +  + EA + Y+SM+   + P +V   T+   YCK+ +S  A+  LE + K
Sbjct: 399 IKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  S+ + + A+C  G V++    L+ M   G   +    T+LI A C     G I QA 
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCR---NGDIDQAK 162

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            +   M   G   N Y +T++I+G  KKG+ +  F L+ K+ +     PN++TY ++I+ 
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKM-KLVGVLPNLYTYNSLITE 221

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           YC++ K++ A  + + + ++G+  N  TY  LI G C+ G   +A  L++ M +    P 
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT 281

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              +N ++DGLC  G++ +A   L+K     L    +TY IL+S   K   +     L  
Sbjct: 282 TRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVR 341

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M   G++P    YT L+  F R   ++++ + F      GL P + TY  +I G    G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  A K ++ M ++   P+++ Y  +I+G CK+    +A +F E M+  G++P   + +
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYI 461

Query: 582 TLAYEYCKQGDSATAMIILESL 603
           +     CK G S  A  +L+ +
Sbjct: 462 STIQILCKDGKSIEAKRLLKEM 483



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 166/347 (47%), Gaps = 39/347 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ F + G  K+GF +  +M   G+     T N ++   C  G +  A +VFDE+  RG
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +A +Y +++   CR G+V++A+  L                                
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKAEGLL-------------------------------- 270

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                 E M R    P   T  +L+DGLC  G  +KA   +L+ ++     P + TY  +
Sbjct: 271 ------ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS-YLEKLKLIGLCPTLVTYNIL 323

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+ K    +    L+  M+++G+ P+  TYT L+    +  + E+AY++  LM + G 
Sbjct: 324 ISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGL 383

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  +I GLC KG + EA +L K   +  LQ + + Y  +++ + K+  + +AL 
Sbjct: 384 VPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALK 443

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
               MVK G+ P++ +Y + I   C+  K  E+++  +E   AGL P
Sbjct: 444 FLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 44/381 (11%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           ++Q+ +  + MV KG  P+ ++    +D L K G  ++ +  F + +    +  +V+++ 
Sbjct: 54  LEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF--DVYSFG 111

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I  +C+                                    GN  + ++L+  M   
Sbjct: 112 ITIKAFCEN-----------------------------------GNVSKGFELLAQMETM 136

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G +PN++ Y  +I+  C+ G + +A  +  +     L A++  YTI+++   K+   K  
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L+ +M   G+ P+++ Y +LI  +CR  K+  + K F E    G+     TY  +I G
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R G +S A    +RM +    P   T+  L+ GLC   +LD+A  + E +   G+ P 
Sbjct: 257 LCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLD-------KKLWIRTVNTLIRKLCSEKRVGMAA 629
            VT   L   + K G+S+    ++  ++       K  +   +NT +R    EK   M  
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
           L     L  DQ+   V +  L
Sbjct: 377 LMKRIGLVPDQHTYGVLIHGL 397


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 225/473 (47%), Gaps = 7/473 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V    + G++ E   +  EMT  G+P    T N V+   C+   V+ A+ +  +M
Sbjct: 213 VYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQM 272

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  D  +Y  ++  Y  +G+  +A R    M  RG I +  T +  +   C     
Sbjct: 273 VGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCK---H 329

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I++A E  + M+ KG K N+ +++ L+ G    G       LF  +VR D   PN H 
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR-DGIVPNQHV 388

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +++GY K   +  A  + E M+++GL P+  TY ++I+  C++G+ + A D  + M 
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  PN   Y  +I G C  G + +A EL+ +   + L    +++  L++   K+    
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +F  +++ G   D++ +T+LI  +C   KM E+ +     ++ G+ P   TY +++
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  ++G I   +  F+ +   G  P   TYG ++ GL    +   A + ++ MI  GI+
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKR 624
               T   L    C+   +  A+ + + L   + K  I  +N +I K+   +R
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARR 681



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 208/461 (45%), Gaps = 7/461 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V  A ++F EM  +GV  +  +Y  ++ A C+   V +A   L  M+  G   DN T 
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTY 284

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LI  +      G  KQA  + +EM  +G  PN  T +  +  LCK G  E+A R F  
Sbjct: 285 NTLIHGYST---LGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEA-REFFD 340

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            + +  +K N+ +Y+ ++ GY     +     L   M   G++PN + +  L+ G+ K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
               A  + + M K G  P++  Y A+I   C+ G + +A +       + ++ +   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+       +  +A  L   +   GL P I ++ +LI   C++ ++ E+++ F   I  
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G       +TS+I GY   G +S A +    M  +G  PD +TYG L++G CK  ++D+ 
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRK 618
              +  ++ KG+ P   T   +       G +A A  + + + +    + I T + L+  
Sbjct: 581 LILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTG 640

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           LC       A   F KL   +   D V L  + +  +++ +
Sbjct: 641 LCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARR 681



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 221/483 (45%), Gaps = 7/483 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++ +G+ K+   M  EMT+ G+   T T +  V   C+ G +E A E FD M A+G
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY  ++  Y   G + +     + M+  G + +     +L+  +   G    ++
Sbjct: 347 HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM---VR 403

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  + E+M ++G  P+V T+  +I   C+ G  + A   F  ++     +PN   Y  +
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI-DKGVEPNFAVYQCL 462

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C    + +AE L+  ++ +GL P   ++ SLI   CK G    A  + D++ + G 
Sbjct: 463 IQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE 522

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  + ++IDG C  G++ EA+ +        ++ D +TY  L++   K       L 
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  ++  G+ P    Y  ++       +   +++ FQE I +G+  T  TY+ ++ G  
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+     A+  FQ++  +    D +    +IS + K  + +EA   + S+   G+ P   
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL 635
           T   +     K+G    A  +   + K     T   +N ++R L  +  +  A ++  ++
Sbjct: 703 TYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRV 762

Query: 636 LGK 638
            GK
Sbjct: 763 DGK 765



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A  G L +  ++   M  +G+       N +V    + G+V  A  +F++M  RG
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++ A+CRMG + +A    + M+D+G   + A    LI  FC     G + 
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT---HGDLV 473

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E+  KG  P + +   LI+ LCK+G   +A R+F  ++R+   K +V+ +T++
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE-KADVNIFTSL 532

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC   KM+ A  + + M   G+ P+  TY +L+ G CK G  +    L   +  +G 
Sbjct: 533 IDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P  + Y  I+DGL   GR   A E+ ++  +  +     TY+ILL+   +   T++A+ 
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F ++    +  DI     +I+   + ++ +E+E  F      GL PT +TYT M+   +
Sbjct: 653 VFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLI 712

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           ++G++  A   F  M + G +P +     ++  L ++ ++ +A  +   + GK I
Sbjct: 713 KEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSI 767



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 192/423 (45%), Gaps = 6/423 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y +++   CR  R+  A  +   +L +G   D   ++ L+   CD   + + +    L 
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDA--KRTDEAVDVLF 162

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP-NVHTYTAMISGYC 343
             M   G  P+  +++ ++  +C  G ++ A  +    V+     P NV  Y+ ++ G  
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLF 222

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           KE K+  A  L   M +QG+ PN  TY S+I+  CK    ++A  ++  M   G  P+  
Sbjct: 223 KEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV 282

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN +I G    G+ ++A  + K+   R +  + +T +  ++   K    ++A   F  M
Sbjct: 283 TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  G   +I +Y+TL+  +     + +    F   +  G+ P +  +  ++ GY + G +
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMV 402

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+  F+ M + G  PD +TY A+I   C+   +D+A   +  MI KG+ P       L
Sbjct: 403 REAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCL 462

Query: 584 AYEYCKQGDSATA-MIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C  GD   A  ++ E  +K L   I +  +LI  LC E RV  A   F  ++   +
Sbjct: 463 IQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE 522

Query: 641 NVD 643
             D
Sbjct: 523 KAD 525



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 136/265 (51%), Gaps = 3/265 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD- 388
           P V+TY+ +I   C+  +++ A      +  QG+  +    +SL+ G C     + A D 
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR--ELQADKITYTILLSE 446
           L   M + GC P+  +Y+ ++  +C  GR Q A ++L+ A ++      + + Y+ ++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+ +  +A  LF  M + G+ P++  Y ++I A C+ + + +++   ++ +  G+ P 
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY ++I GY   G    AV+ F+ M   G  P+ +T    ++ LCK  +++EA +F++
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG 591
           SM+ KG     ++  TL + Y   G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAG 365



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 33/338 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V QC++  F   G L +   +V E+ N GL     +   ++   C+ G V  A+ +FD +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-- 272
              G  AD + +  ++  YC +G+++EA R   AM+  G   D  T   L+   C  G  
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRI 577

Query: 273 ------FR------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                 FR                        G    A E+ +EM+  G    + T+++L
Sbjct: 578 DDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSIL 637

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           + GLC+   TE+A  +F KL  + N K ++     MIS   K  +   AE L   + + G
Sbjct: 638 LTGLCRNNCTEEAITVFQKLC-AMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYG 696

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+P   TYT ++    K G+ E A  +  +M K G +P  +  N I+  L +KG + +A 
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAG 756

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
             + +   + +  +  T ++LLS    + + ++ L L 
Sbjct: 757 IYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 6/263 (2%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           G     P +Y Y+ +ID  C+  R+  A+       ++ ++AD I  + LL        T
Sbjct: 95  GPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRT 154

Query: 454 KQALG-LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-TAGLFPTK-ETY 510
            +A+  LF RM + G  PD  +Y+T++ + C   + + +    + A+   G  P     Y
Sbjct: 155 DEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVY 214

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++++ G  ++G +  A   F  M Q G  P+ +TY ++I  LCK   +D+A      M+G
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGM 627
            G+ P  VT  TL + Y   G    A+ + + +  +  I    T +T +  LC   R+  
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334

Query: 628 AALFFHKLLGKDQNVDRVSLAAL 650
           A  FF  +L K   ++ +S + L
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTL 357


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 219/451 (48%), Gaps = 11/451 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +F+ M   GV   A+   +++  +C +GR+  A    +  L  G  + N TL  LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 267 AFCDKGFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             CD G R   ++   F  + E+   G+ P+V+++  LI GLC +  +++A  L + +  
Sbjct: 135 GLCD-GNRTDDAMDMVFRRMPEL---GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA 190

Query: 325 SDNYK--PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
              Y   PNV +Y  +I G+ KE ++++A  L   M  QGL P+  TY SLI G CK   
Sbjct: 191 DGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA 250

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A  ++  M  +G  P+   YN +I G C  G+++EA  LLKK     LQ D +TY++
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + K     +A  +F  MV+ G  P+   Y  L+  +  +  + +        I  G
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           +      +  +IC Y + G +  A+  F  M Q G  PD ++Y  +I  LCK  ++++A 
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIRKL 619
             +  M+ +G+SP  ++  +L +  C  G+      +  E +++ +    +  NT++  L
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           C E RV  A  FF  ++      D VS   L
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 222/481 (46%), Gaps = 7/481 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + + + +  EM   GLP    T N ++   C+   ++ A  +   M  +G
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y +M+  YC +G++ EA R L  M   G   D  T +LLI  +C     G   
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKI---GRCA 322

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  + + MVRKG KPN   + +L+ G   KG      R  L L+  D        +  +
Sbjct: 323 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV-RDLLDLMIRDGIPFEHRAFNIL 381

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K   +++A      M++ GL P+  +Y+++I+  CK G  E A    + M  EG 
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI ++ ++I GLC  G  ++  EL  +   R +  D I    ++    K+    +A  
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  ++  G+ PD+ +Y TLI  +C   KM ES K     ++ GL P   TY S++ GY 
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A+  ++ M +       IT   ++ GL +  ++  A + Y  M+ +G      
Sbjct: 562 KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIE 621

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  T+    C+      A+ + E L  K   L +RT + +I  L    R+  A   F  +
Sbjct: 622 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAM 681

Query: 636 L 636
           +
Sbjct: 682 V 682



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 244/511 (47%), Gaps = 16/511 (3%)

Query: 170 KEGFSMVIEMTNNG----LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +E   ++I MT +G     P + S  N V+    + G V+ A  +F EM  +G+  D  +
Sbjct: 179 QEALELLIHMTADGGYNCSPNVVS-YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVT 237

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++   C+   + +A   L  M D+G + D  T  ++I  +C     G +++A  LL+
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCS---LGQLEEAVRLLK 294

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M   G +P+V T+++LI   CK G   +A  +F  +VR    KPN   Y  ++ GY  +
Sbjct: 295 KMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATK 353

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +     LL+ M   G+      +  LI  + K G  ++A      M + G  P++ +Y
Sbjct: 354 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 413

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + +I  LCK GRV++A     +     L  + I++T L+       E K+   L   M+ 
Sbjct: 414 STVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 473

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G++PD     T++   C++ ++ E++ FF   I  G+ P   +Y ++I GY   G +  
Sbjct: 474 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDE 533

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           ++K   RM  IG  PD+ TY +L++G  K  ++++A   Y  M  K +  C +T   + +
Sbjct: 534 SIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLH 593

Query: 586 EYCKQGDSATAM-IILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
              + G    A  + ++ +D+  +L I T NT++  LC    V  A   F  L  K+  +
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 653

Query: 643 DRVSLAALKNACYESNKY----ALFSDLSQR 669
           D  + + + NA  +  +     +LFS +  R
Sbjct: 654 DVRTFSIVINALLKVGRIDEAKSLFSAMVLR 684



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 237/519 (45%), Gaps = 16/519 (3%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           RH   L +    +++ +G       ++  ++  F  +GRL   F+        G  +   
Sbjct: 69  RHSAALAVSLFNTMVRSG-VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNV 127

Query: 190 TLNRVVGIACELGLVEYA-EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           TLN+++   C+    + A + VF  M   G   D  SY  ++   C   +  EA   L  
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 249 MLDRGAILDNATLTLLITAFCDKGF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           M   G    N +  ++       GF   G + +A+ L  EM+ +G  P+V T+  LIDGL
Sbjct: 188 MTADGGY--NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGL 245

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK    +KA  + L+ +      P+  TY  MI GYC   ++  A  LL++M   GL P+
Sbjct: 246 CKAQAMDKAVAI-LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY+ LI  +CK+G    A  + D M ++G  PN   Y+ ++ G   KG + +  +LL 
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              +  +  +   + IL+  + K     +A+  F  M + GL PD+ +Y+T+I   C+  
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +++++   F + ++ GL P   ++TS+I G    G      +    M   G  PD I   
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 484

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            ++  LCK+ ++ EA  F++ +I  G+ P  V+  TL   YC  G    +   ++ LD+ 
Sbjct: 485 TIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES---IKQLDRM 541

Query: 607 LWIR------TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           + I       T N+L+       RV  A   + ++  KD
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 228/503 (45%), Gaps = 41/503 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  +  +G+L+E   ++ +M+ +GL     T + ++   C++G    A  VFD M  +G
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +++ Y +++  Y   G + +    L  M+  G   ++    +LI A+      G++ 
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK---HGAVD 392

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A     EM + G +P+V +++ +I  LCK G  E A   F ++V S+   PN+ ++T++
Sbjct: 393 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV-SEGLSPNIISFTSL 451

Query: 339 ISGYC-----------------------------------KEEKMNRAEMLLERMKEQGL 363
           I G C                                   KE ++  A+   + +   G+
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  +Y +LI G+C VG  + +   +D M   G  P+ + YN++++G  K GRV++A  
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALA 571

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++ F+++++   IT  I+L    +      A  L+ +MV  G    I  Y T++   C
Sbjct: 572 LYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
               + E+ + F++  +        T++ +I   L+ G I  A   F  M   G  PD I
Sbjct: 632 ENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVI 691

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I    ++  L+E+   + SM   G +        +     ++GD   A   L  +
Sbjct: 692 TYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKI 751

Query: 604 DKKLWIRTVNT--LIRKLCSEKR 624
           D+K +    +T  L+  + SEK+
Sbjct: 752 DEKNFSLEASTAALLIPIVSEKK 774



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 189/420 (45%), Gaps = 4/420 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++  +A  G L +   ++  M  +G+P      N ++    + G V+ A   F EM
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 401

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  SY  ++   C+ GRV +A    + M+  G   +  + T LI   C     
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI--- 458

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G  K+  EL  EM+ +G  P+      ++D LCK+G   +A + F  +V     KP+V +
Sbjct: 459 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA-QDFFDMVIHIGVKPDVVS 517

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GYC   KM+ +   L+RM   GL P++ TY SL+ G+ K G  E A  L   M 
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++         N ++ GL + GR+  A EL  K   R  Q    TY  +L    + +   
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL +F  +       D+  ++ +I A  +  ++ E++  F   +  G  P   TY+ MI
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             ++ +G +  +   F  M + GCA D+     ++  L ++  +  A  +   +  K  S
Sbjct: 698 KSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFS 757



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 189/412 (45%), Gaps = 5/412 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++ ++A+ G + +  +   EM  NGL     + + V+ I C+ G VE A   F+
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  +  S+  ++   C +G   + +     M++RG   D   +  ++   C + 
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE- 493

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A +  + ++  G KP+V ++  LIDG C  G  +++ +   ++V S   +P+ 
Sbjct: 494 --GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV-SIGLRPDS 550

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY ++++GY K  ++  A  L   M  + +     T   +++G  + G    A +L   
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G    I  YN ++ GLC+   V EA  + +    +E + D  T++I+++  LK   
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF  MV  G  PD+  Y+ +I +   +  ++ES+  F      G          
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           ++   L  G++  A  Y  ++++   + +  T  AL+  +  + K  +  +F
Sbjct: 731 IVRRLLEKGDVRRAGTYLTKIDEKNFSLEAST-AALLIPIVSEKKYQKEVKF 781



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 59/130 (45%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        ++++  ++GR+ E  S+   M   G      T + ++    E GL+E ++
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +F  M   G  AD+    ++V      G V  A  +L+ + ++   L+ +T  LLI   
Sbjct: 711 NLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIV 770

Query: 269 CDKGFRGSIK 278
            +K ++  +K
Sbjct: 771 SEKKYQKEVK 780


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 219/481 (45%), Gaps = 14/481 (2%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P      ++++G    +G    A  +F ++ ++G+    ++  +++  YC    ++ A  
Sbjct: 52  PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS 111

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  +L  G   +  T   LI  FC     G + +A     +++ KG+  + +++  LI+
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFC---INGMVSKAMAFRLDLMAKGYPLDEFSYGSLIN 168

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK G T  A +L  K+   D  +PN+ TY+ +I G CK+  +  A  L   +  +G+L
Sbjct: 169 GLCKNGQTRDALQLLQKM-EEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGIL 227

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            +   Y SLI+G C VG +  A  L+ +M +    P+ Y +N ++D LCK+GR+ EA  +
Sbjct: 228 VDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGV 287

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                +R  + D +TY  L+          +A  LF RMVK GL PD+  Y  LI  +C+
Sbjct: 288 FAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCK 347

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              + E+   F+E     L P   TY S+I G  + G +S   +    M   G +PD +T
Sbjct: 348 IDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVT 407

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y   +   CK    ++A   +  ++ +GI P       +   +CK        I  E+L 
Sbjct: 408 YNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCK---GEKLKIAEEALQ 463

Query: 605 KKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
             L       +RT   +I  LC +     A     K+   D   D V+   +  A  E N
Sbjct: 464 HLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERN 523

Query: 659 K 659
           +
Sbjct: 524 E 524



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 206/415 (49%), Gaps = 5/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G + +  +  +++   G PL   +   ++   C+ G    A ++  +M    
Sbjct: 131 LINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDL 190

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++   C+   + +A R  S +  RG ++D      LI   C  G     +
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVG---QWR 247

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL  MVR    P+ YT  +L+D LCK+G   +A  +F  +++    KP++ TY A+
Sbjct: 248 EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE-KPDIVTYNAL 306

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+C    ++ A  L  RM ++GL P+   Y  LI G+CK+   + A  L   +  +  
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN++IDGLCK GR+    EL+ +   R    D +TY I L    K    ++A+ 
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF R +  G+ PD + Y  ++  FC+ +K+K +E+  Q  +  G  P   TYT MI    
Sbjct: 427 LF-RQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +D +   A+    +M+   C PD +T+  +I  L ++++ D+A +    MI +G+
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 6/392 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+RK   P ++    L+  + + G    A  LF +L  S    P++ T T +I+ YC + 
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQL-HSKGITPSIATLTILINCYCHQA 104

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MDLMGKEGCTPNIYAY 405
            ++ A  LL  + + G  PN  T+ +LI G C  G   +A    +DLM K G   + ++Y
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK-GYPLDEFSY 163

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
            ++I+GLCK G+ ++A +LL+K  +  ++ + ITY+ ++    K      AL LF  +  
Sbjct: 164 GSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTS 223

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+  D+ AY +LI   C   + +E+ +     +   + P   T+  ++    ++G I  
Sbjct: 224 RGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVE 283

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A   F  M + G  PD +TY AL+ G C  + + EA + +  M+ +G+ P  +    L  
Sbjct: 284 AQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLIN 343

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            YCK      AM++ + +  K  +    T N+LI  LC   R+        ++  + Q+ 
Sbjct: 344 GYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSP 403

Query: 643 DRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
           D V+     +A  +S  Y     L ++I +GI
Sbjct: 404 DIVTYNIFLDAFCKSKPYEKAISLFRQIVQGI 435



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 41/333 (12%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           FS+V   T+ G+ +     N ++   C +G    A  +   M    +  D  ++ ++V A
Sbjct: 218 FSLV---TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDA 274

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            C+ GR+ EA    + M+ RG   D  T   L+  FC      ++ +A EL   MV++G 
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFC---LSNNVSEARELFNRMVKRGL 331

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +P+V  + VLI+G CK    ++A  LF K +R  N  PN+ TY ++I G CK  +M+  +
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLF-KEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQ 390

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM--------------DLMGK--- 395
            L++ M ++G  P+  TY   +   CK   +E+A  L               D++ +   
Sbjct: 391 ELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFC 450

Query: 396 -----------------EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
                             GC PN+  Y  +I+ LCK     EA  LL K    +   D +
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAV 510

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           T+  ++    ++ ET +A  L   M++ GL  D
Sbjct: 511 TFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 156/353 (44%), Gaps = 17/353 (4%)

Query: 92  IDSLTHEQAIT---VVASLANEAGSMVAL----SFFYWAIGFAKFRHFMRLYIVCATSLI 144
           ID L  ++ I     + SL    G +V +    S  +      ++R   RL      +++
Sbjct: 202 IDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL-----TMM 256

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
             GN          +V +  + GR+ E   +   M   G      T N ++   C    V
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNV 316

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
             A E+F+ M  RG+  D  +Y +++  YC++  V EA      +  +  + + AT   L
Sbjct: 317 SEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL 376

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I   C  G    ++   EL++EM  +G  P++ T+ + +D  CK    EKA  LF ++V+
Sbjct: 377 IDGLCKLGRMSCVQ---ELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ 433

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                P+ + Y  ++  +CK EK+  AE  L+ +   G  PN  TYT +I   CK  +F+
Sbjct: 434 G--IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            A  L+  M    C P+   +  II  L ++    +A +L  +  +R L  D+
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 3/302 (0%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
             RM  +   P    +  L+    ++G++  A  L   +  +G TP+I     +I+  C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +  +  A+ LL    +   Q + +T+  L++         +A+     ++  G   D  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI   C+  + +++ +  Q+     + P   TY+++I G  +D  I+ A++ F  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G   D + Y +LI G C   +  EA +    M+   I+P + T   L    CK+G   
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 595 TAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            A  +   + K   K  I T N L+   C    V  A   F++++ +    D ++   L 
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 652 NA 653
           N 
Sbjct: 343 NG 344



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 3/198 (1%)

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F RM++    P I  +  L+ A  R      +   F +  + G+ P+  T T +I  Y  
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             ++S A      + ++G  P+ +T+  LI+G C    + +A  F   ++ KG    E +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +L    CK G +  A+ +L+ +++ L    + T +T+I  LC ++ +  A   F  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 637 GKDQNVDRVSLAALKNAC 654
            +   VD V+  +L + C
Sbjct: 223 SRGILVDVVAYNSLIHGC 240


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 206/391 (52%), Gaps = 7/391 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    VV   C+ G V +A ++ DEM   GV  +A  Y  ++ AY R         
Sbjct: 143 PLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 199

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M + G      T T+L+           I +   + EEM  K    +VY ++ +I+
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAAR---DITKVEAVFEEMKSKNLSGDVYFYSSVIN 256

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             C+ G   +A  +F + V  +  +PN HTY A+I+G+CK  +M  AEML+  M+ +G+ 
Sbjct: 257 AYCRAGNVRRASEVFDECV-GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 315

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   + ++I G+C+    ++A ++  +M K G   ++Y YN +  GL +  R+ EA  L
Sbjct: 316 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L+   ++ ++ + ++YT L+S H  + +  +A  LF  M   G  P +  Y  ++  + +
Sbjct: 376 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  ++E+E+F +E    GL P   +Y +++ G+  +G +  A++ F+ M Q G  P+ + 
Sbjct: 436 KGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ALISGL K+ + +EA Q Y++M+G G++P
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTP 526



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 191/401 (47%), Gaps = 7/401 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           ++++  +C  G    +  A +LL+EM R G K N   +  L+D   ++   ++   + LK
Sbjct: 147 SVVVDGYCKSG---RVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM-LK 202

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++ ++  +P V TYT ++ G      + + E + E MK + L  +   Y+S+I  +C+ G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N  RA ++ D     G  PN + Y A+I+G CK G+++ A  L+     R +  ++I + 
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++  + ++    +AL +   M K G+  D++ Y TL     R  +M E++   +  I  
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   +YT++I  +  +G++  A + F+ M   G  P  +TY  ++ G  K+  + EA
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 442

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
            +F + M  KG+ P   +   L + +C  G    A+ + E + +   K  +     LI  
Sbjct: 443 ERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L  E R   A   +  +LG     D    +AL  + +   K
Sbjct: 503 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 182/386 (47%), Gaps = 22/386 (5%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLIT 188
           RH +++  +C  SL+     E+  +             R+ E   M+  M N G+ P + 
Sbjct: 171 RHGVKVNALCYNSLLDAYTREKDDD-------------RVAE---MLKVMENEGIEPTVG 214

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +    V G++    + +  E VF+EM ++ +  D   Y  ++ AYCR G V  A      
Sbjct: 215 TYTILVDGLSAARDITK-VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 273

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +  G   +  T   LI  FC     G ++ A  L+ +M  +G   N      +IDG C+
Sbjct: 274 CVGNGIEPNEHTYGALINGFCKI---GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           K   +KA  + + ++     + +V+TY  +  G  +  +M+ A+ LL  M E+G+ PN  
Sbjct: 331 KNMVDKALEIKM-IMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 389

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +YT+LI  HC  G+   A  L   M   G  P++  YN ++DG  KKG ++EA    K+ 
Sbjct: 390 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEM 449

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ L  D  +Y  L+  H    +   AL LF  M + G  P++ AYT LI+   ++ + 
Sbjct: 450 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509

Query: 489 KESEKFFQEAITAGLFPTKETYTSMI 514
           +E+ + +   +  GL P    Y++++
Sbjct: 510 EEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 4/294 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C  G V  A EVFDE    G+  +  +Y  ++  +C++G++  A+  ++ M  RG
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             ++      +I  +C K     + +A E+   M + G + +VYT+  L  GL +    +
Sbjct: 314 VGINQIVFNTMIDGYCRKNM---VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L L+++     +PN  +YT +IS +C E  M  A  L   M   G  P+  TY  +
Sbjct: 371 EAKNL-LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G+ K G+   A      M K+G  P+IY+Y A++ G C  G+V  A  L ++  QR  
Sbjct: 430 MDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           + + + YT L+S   K+  +++A  L+  M+  GL PD   Y+ L+ +    KK
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 3/154 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++S     G + E   +  EM  NG      T N ++    + G +  AE    
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKK 447

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  +G+  D  SY  +V  +C  G+V  A R    M  RG+  +    T LI+    + 
Sbjct: 448 EMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE- 506

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             G  ++AF+L + M+  G  P+   ++ L+  L
Sbjct: 507 --GRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 248/526 (47%), Gaps = 25/526 (4%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS 118
           + +VK V  +       +  L S  P  N  +D   L+H         + ++  ++++L 
Sbjct: 95  EEIVKRVSDITRTRPRWEQTLLSDFPSFNF-LDPTFLSH--------FVEHQKNALISLR 145

Query: 119 FFYW---AIGFAKFRHFMRLYI-------VC--ATSLISNGNFERAHEVMQCMVSSFAEI 166
           FF+W     GF+       +          C  A S + + NF      ++  +    + 
Sbjct: 146 FFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAYIRCLCKG 205

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E  S+  ++   G+    +T N V+  +   G +++  E++ EM    V AD  + 
Sbjct: 206 GLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTV 265

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V A+C   R+++    L  +L+ G +  NA    LI+ FC     G +    +LL  
Sbjct: 266 GYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVS---DLLHS 322

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +   P+++T+  +++GLCK G   + FR+F K ++   Y P+   YT MI G C+ +
Sbjct: 323 MIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVF-KDLKDRGYAPDRVMYTTMIHGLCRMK 381

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  A  L   M ++G LPN  TY ++I+G+ K+GN E A+ +   M  +G      +YN
Sbjct: 382 WLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYN 441

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GLC  G+++EA++L ++   + +  + ITY  L+    K+ +  +   L   ++  
Sbjct: 442 VMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQ 501

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P   +Y  LI   C++  M+ ++  + +    G+ P   T+  MI G+ + G     
Sbjct: 502 GIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEG 561

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +++   M +    P   ++ +LI  L +  +LD+A    +SM+  G
Sbjct: 562 MEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIG 607



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 176/389 (45%), Gaps = 7/389 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D+SS  ++  A    G    A  +L +          A+L   I   C  G    +
Sbjct: 155 GFSPDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGL---V 208

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  +  ++   G   ++ T   ++ G  + G  +  + L+ ++V S +   +VHT   
Sbjct: 209 EEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVES-SVVADVHTVGY 267

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++  +C E +++    LL R+ E G++P    +  LI G CK   + R  DL+  M    
Sbjct: 268 LVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARN 327

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I+ Y  +++GLCK G+  E + + K    R    D++ YT ++    +      A 
Sbjct: 328 RAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDAR 387

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M++ G  P+ + Y  +I  + +   ++E+ K ++E    G      +Y  MI G 
Sbjct: 388 KLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGL 447

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G I  A   F+ M+  G   ++ITY AL+ G CK+ K+ E       ++ +GI P  
Sbjct: 448 CSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSA 507

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +   L  + C++GD   A I+ + +  +
Sbjct: 508 ASYAPLIDKLCQEGDMQNAKILWDDMQNR 536


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 126 FAKFRHFMRLYIVCATSLISNGNFERAHEVM-QCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
           FAK  H+    I  + S++  G++  A+ ++   +V ++ + G +           + G 
Sbjct: 133 FAKNAHYSNSTIFHSLSVL--GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGF 190

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
            L   + N ++    + G +   E V+ EM  R +  +  ++ +++   C++G+  +A  
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            +  M   G      T   +I  +C  G    + +A  LL+EMV K   PN  T  +LID
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAG---KMFKADALLKEMVAKRIHPNEITFNILID 307

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C+      A ++F ++ R    +PNV TY ++I+G C   K++ A  L ++M   GL 
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY +LI G CK    + A +++D +GK G  PN+  +N +ID   K GR+ +A+ L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                   +  +  TY  L+    ++   K+A  L   M   GL  D+  Y  L+ A C+
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + + +++ +   E    GL P+  TY ++I GY R+GN ++A+     M + G   + +T
Sbjct: 487 KGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVT 546

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           Y  LI G C + KL+EA +    M+ KG+ P   T   L  E  ++G
Sbjct: 547 YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 225/440 (51%), Gaps = 7/440 (1%)

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
           CA++    ++V AY + G +  A        D G  L   +   ++ +   +G  G ++ 
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVES 215

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            ++   EM+R+    NV T  V+I+GLCK G  +KA  + ++ +++  + P+V TY  +I
Sbjct: 216 VYK---EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV-VEDMKAWGFSPSVITYNTII 271

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            GYCK  KM +A+ LL+ M  + + PN  T+  LI G C+  N   A  + + M ++G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  YN++I+GLC  G++ EA  L  K     L+ + +TY  L++   K+   K+A  +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              + K GL P++  + TLI A+ +  +M ++       +  G+ P   TY  +I G+ R
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +GN+  A K  + M   G   D +TY  L+  LCK+ +  +A +  + M   G++P  +T
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511

Query: 580 RVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L   Y ++G+S  A+    ++E   ++  I T N LI+  C++ ++  A    +++L
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571

Query: 637 GKDQNVDRVSLAALKNACYE 656
            K    +R +   L++   E
Sbjct: 572 EKGLIPNRTTYDILRDEMME 591



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 4/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G+L E   +  +M+  GL     T N ++   C+  +++ A E+ D++  RG
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++ AY + GR+ +A    S MLD G   + +T   LI  FC +G   ++K
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG---NVK 456

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM   G K ++ T+ +L+D LCKKG T KA RL  ++       P+  TY A+
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV-GLNPSHLTYNAL 515

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY +E     A  +   M+++G   N  TY  LI G C  G  E A  L++ M ++G 
Sbjct: 516 IDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575

Query: 399 TPNIYAYNAIIDGLCKKGRVQE 420
            PN   Y+ + D + +KG + +
Sbjct: 576 IPNRTTYDILRDEMMEKGFIPD 597


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 191/379 (50%), Gaps = 4/379 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G V    E+  +M   GV  +   Y +++ A CR G + +A    S M D G   + 
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQ 177

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              T++I  F  KG++   K  FEL ++M   G  PN+YT+  LI   C+ G    AF++
Sbjct: 178 YIYTIMINGFFKKGYK---KDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKV 234

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ +      N  TY  +I G C++ ++++AE LLERMK   + P T T+  L+ G C
Sbjct: 235 FDEISKR-GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  ++A   ++ +   G  P +  YN +I G  K G      EL+++   R +   K+
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL++  ++  + ++A  +F  M + GL PD H Y  LI   C +  M E+ K ++  
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +   L P    Y +MI GY ++ N   A+K+ + M + G  P+  +Y + I  LCK  K 
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKS 473

Query: 559 DEACQFYESMIGKGISPCE 577
            EA +  + M   G+ P E
Sbjct: 474 IEAKRLLKEMTEAGLKPPE 492



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 205/412 (49%), Gaps = 5/412 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+  + +  L+E + + F  M  +G    + S+   +    + G +     + +  L R 
Sbjct: 44  VINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  +  + I AFC+    G++ + FELL +M   G  PNV+ +T+LI+  C+ G  +
Sbjct: 104 Q-FDVYSFWITIKAFCE---NGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDID 159

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  +F ++        N + YT MI+G+ K+        L ++MK  G+LPN  TY SL
Sbjct: 160 QAKVMFSRM-DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  +C+ G    A+ + D + K G   N   YN +I GLC+KG+V +A  LL++  +  +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                T+ +L+       +  +AL    ++   GL P +  Y  LI+ F +        +
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    G+ P+K TYT ++  ++R  +I  A + F  M +IG  PD  TYG LI GLC
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +  + EA + Y+SM+   + P +V   T+   YCK+ +S  A+  LE + K
Sbjct: 399 IKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  S+ + + A+C  G V++    L+ M   G   +    T+LI A C     G I QA 
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCR---NGDIDQAK 162

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            +   M   G   N Y +T++I+G  KKG+ +  F L+ K+ +     PN++TY ++I+ 
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKM-KLVGVLPNLYTYNSLITE 221

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           YC++ K++ A  + + + ++G+  N  TY  LI G C+ G   +A  L++ M +    P 
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT 281

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              +N ++DGLC  G++ +A   L+K     L    +TY IL+S   K   +     L  
Sbjct: 282 TRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVR 341

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M   G++P    YT L+  F R   ++++ + F      GL P + TY  +I G    G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  A K ++ M ++   P+++ Y  +I+G CK+    +A +F E M+  G++P   + +
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYI 461

Query: 582 TLAYEYCKQGDSATAMIILESL 603
           +     CK G S  A  +L+ +
Sbjct: 462 STIQILCKDGKSIEAKRLLKEM 483



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 166/347 (47%), Gaps = 39/347 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ F + G  K+GF +  +M   G+     T N ++   C  G +  A +VFDE+  RG
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +A +Y +++   CR G+V++A+  L                                
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKAEGLL-------------------------------- 270

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                 E M R    P   T  +L+DGLC  G  +KA   +L+ ++     P + TY  +
Sbjct: 271 ------ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS-YLEKLKLIGLCPTLVTYNIL 323

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+ K    +    L+  M+++G+ P+  TYT L+    +  + E+AY++  LM + G 
Sbjct: 324 ISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGL 383

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  +I GLC KG + EA +L K   +  LQ + + Y  +++ + K+  + +AL 
Sbjct: 384 VPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALK 443

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
               MVK G+ P++ +Y + I   C+  K  E+++  +E   AGL P
Sbjct: 444 FLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 44/381 (11%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           ++Q+ +  + MV KG  P+ ++    +D L K G  ++ +  F + +    +  +V+++ 
Sbjct: 54  LEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF--DVYSFW 111

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I  +C+                                    GN  + ++L+  M   
Sbjct: 112 ITIKAFCEN-----------------------------------GNVSKGFELLAQMETM 136

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G +PN++ Y  +I+  C+ G + +A  +  +     L A++  YTI+++   K+   K  
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L+ +M   G+ P+++ Y +LI  +CR  K+  + K F E    G+     TY  +I G
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R G +S A    +RM +    P   T+  L+ GLC   +LD+A  + E +   G+ P 
Sbjct: 257 LCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLD-------KKLWIRTVNTLIRKLCSEKRVGMAA 629
            VT   L   + K G+S+    ++  ++       K  +   +NT +R    EK   M  
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
           L     L  DQ+   V +  L
Sbjct: 377 LMKRIGLVPDQHTYGVLIHGL 397


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 205/391 (52%), Gaps = 7/391 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    VV   C+ G V +A ++ DEM   GV  +A  Y  ++ AY R         
Sbjct: 143 PLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 199

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M + G      T T+L+           I +   + EEM  K    +VY ++ +I+
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAAR---DITKVEAVFEEMKSKNLSGDVYFYSSVIN 256

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             C+ G   +A  +F + V  +  +PN HTY A+I+G+CK  +M  AEML+  M+ +G+ 
Sbjct: 257 AYCRAGNVRRASEVFDECV-GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 315

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   + ++I G+C+    ++A ++  +M K G   ++Y YN +  GL +  R+ EA  L
Sbjct: 316 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L+   ++ ++ + ++YT L+S H  + +  +A  LF  M   G  P +  Y  ++  + +
Sbjct: 376 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  ++E+E+F  E    GL P   +Y +++ G+  +G +  A++ F+ M Q G  P+ + 
Sbjct: 436 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ALISGL K+ + +EA Q Y++M+G G++P
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTP 526



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           ++++  +C  G    +  A +LL+EM R G K N   +  L+D   ++   ++   + LK
Sbjct: 147 SVVVDGYCKSG---RVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM-LK 202

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++ ++  +P V TYT ++ G      + + E + E MK + L  +   Y+S+I  +C+ G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N  RA ++ D     G  PN + Y A+I+G CK G+++ A  L+     R +  ++I + 
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++  + ++    +AL +   M K G+  D++ Y TL     R  +M E++   +  I  
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   +YT++I  +  +G++  A + F+ M   G  P  +TY  ++ G  K+  + EA
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 442

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
            +F   M  KG+ P   +   L + +C  G    A+ + E + +   K  +     LI  
Sbjct: 443 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L  E R   A   +  +LG     D    +AL  + +   K
Sbjct: 503 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 181/386 (46%), Gaps = 22/386 (5%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLIT 188
           RH +++  +C  SL+     E+  +             R+ E   M+  M N G+ P + 
Sbjct: 171 RHGVKVNALCYNSLLDAYTREKDDD-------------RVAE---MLKVMENEGIEPTVG 214

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +    V G++    + +  E VF+EM ++ +  D   Y  ++ AYCR G V  A      
Sbjct: 215 TYTILVDGLSAARDITK-VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 273

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +  G   +  T   LI  FC     G ++ A  L+ +M  +G   N      +IDG C+
Sbjct: 274 CVGNGIEPNEHTYGALINGFCKI---GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           K   +KA  + + ++     + +V+TY  +  G  +  +M+ A+ LL  M E+G+ PN  
Sbjct: 331 KNMVDKALEIKM-IMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 389

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +YT+LI  HC  G+   A  L   M   G  P++  YN ++DG  KKG ++EA     + 
Sbjct: 390 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEM 449

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ L  D  +Y  L+  H    +   AL LF  M + G  P++ AYT LI+   ++ + 
Sbjct: 450 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509

Query: 489 KESEKFFQEAITAGLFPTKETYTSMI 514
           +E+ + +   +  GL P    Y++++
Sbjct: 510 EEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 4/294 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C  G V  A EVFDE    G+  +  +Y  ++  +C++G++  A+  ++ M  RG
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             ++      +I  +C K     + +A E+   M + G + +VYT+  L  GL +    +
Sbjct: 314 VGINQIVFNTMIDGYCRKNM---VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L L+++     +PN  +YT +IS +C E  M  A  L   M   G  P+  TY  +
Sbjct: 371 EAKNL-LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G+ K G+   A    + M K+G  P+IY+Y A++ G C  G+V  A  L ++  QR  
Sbjct: 430 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           + + + YT L+S   K+  +++A  L+  M+  GL PD   Y+ L+ +    KK
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 3/154 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++S     G + E   +  EM  NG      T N ++    + G +  AE   +
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 447

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  +G+  D  SY  +V  +C  G+V  A R    M  RG+  +    T LI+    + 
Sbjct: 448 EMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE- 506

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             G  ++AF+L + M+  G  P+   ++ L+  L
Sbjct: 507 --GRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 176/675 (26%), Positives = 309/675 (45%), Gaps = 62/675 (9%)

Query: 16  PSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQ 75
           PS +P   L V+RSL     HH F A++K    S   +S +   SL  ++C+ +L   + 
Sbjct: 74  PSDSPLPLLSVVRSLL---SHHKF-ADAKSLLVSYIRTSDA---SL--SLCNSLL---HP 121

Query: 76  QFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGS-MVALSFFYWAIGFAKFRHFMR 134
             HL   P +    I + +  H             AG   VAL  F   I   K +  + 
Sbjct: 122 NLHLSPPPSKALFDIALSAYLH-------------AGKPHVALQVFQKMIRL-KLKPNL- 166

Query: 135 LYIVCATSLI------SNGNFERAHEVMQCMV---------------SSFAEIGRLKEGF 173
             + C T LI      S+ +   A EV   MV               + +   G+L++  
Sbjct: 167 --LTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDAL 224

Query: 174 SMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            M+  M +   +     T N ++    + G +   +++  +M   G+  +  +Y  +V  
Sbjct: 225 GMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYG 284

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC++G + EA + +  M     + D  T  +LI   C+ G   SI++  EL++ M     
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAG---SIREGLELMDVMKSLKL 341

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +P+V T+  LIDG  + G + +A +L ++ + +D  KPN  T+   +   CKEEK     
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEAKKL-MEQMENDGVKPNQVTHNISLKWLCKEEKREEVT 400

Query: 353 MLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             ++ + E  G  P+  TY +LI  + KVG+   A ++M  MG++G   N    N I+D 
Sbjct: 401 RKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LCK+ +V EA+ LL  A +R    D++TY  L+  + ++ + ++A  ++  M +  + P 
Sbjct: 461 LCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPT 520

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  + +LI   C   K + + + F E   +GL P   T+ S+I GY ++G +  A +++ 
Sbjct: 521 VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN 580

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
              +    PDN T   L++GLCK+   ++A  F+ ++I +      VT  T+   +CK  
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDT-VTYNTMISAFCKDK 639

Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR-VSL 647
               A  +L  +++K       T N++I  L  + ++  A     K  GK  ++ R + L
Sbjct: 640 KLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHL 699

Query: 648 AALKNACYESNKYAL 662
              KN     +K  L
Sbjct: 700 ETEKNPATSESKEEL 714



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 238/522 (45%), Gaps = 51/522 (9%)

Query: 201 LGLVEY--------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
           +GLV Y        A EVFD+M   GV  D  ++ ++V  YC  G++ +A   L  M+  
Sbjct: 174 IGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSE 233

Query: 253 GAI-LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             +  DN T   ++ A   KG    +K   +LL +M R G  PN  T+  L+ G CK G 
Sbjct: 234 FNVNPDNVTYNTILKAMSKKGRLSDVK---DLLLDMKRNGLVPNRVTYNNLVYGYCKLGS 290

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++AF++ ++L++  N  P++ TY  +I+G C    +     L++ MK   L P+  TY 
Sbjct: 291 LKEAFQI-VELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYN 349

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G  ++G    A  LM+ M  +G  PN   +N  +  LCK+ + +E    +K+  + 
Sbjct: 350 TLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEM 409

Query: 432 E-LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                D +TY  L+  +LK  +   AL +   M + G+  +     T++ A C+++K+ E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDE 469

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +      A   G    + TY ++I GY R+  +  A + +  M +I   P   T+ +LI 
Sbjct: 470 AHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIG 529

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG------------------- 591
           GLC   K + A + ++ +   G+ P + T  ++   YCK+G                   
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589

Query: 592 DSATAMIILESL------------------DKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           D+ T  I+L  L                  ++++   T NT+I   C +K++  A     
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLS 649

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           ++  K    DR +  ++  +  E  K +   +L ++ +   G
Sbjct: 650 EMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFG 691



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 63/322 (19%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++ ++ ++G L     M+ EM   G+ + T TLN ++   C+   V+ A  + D    
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHK 479

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEA-DRW------------------------------ 245
           RG   D  +Y  +++ Y R  +V +A + W                              
Sbjct: 480 RGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTEL 539

Query: 246 ----LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
                  + + G + D+ T   +I  +C +G    +++AFE   E ++  +KP+ YT  +
Sbjct: 540 AMEKFDELAESGLLPDDCTFNSIILGYCKEG---RVEKAFEFYNESIKHSFKPDNYTCNI 596

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L++GLCK+G TEKA   F  L+       +  TY  MIS +CK++K+  A  LL  M+E+
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG-----------------------KEGC 398
            L P+  TY S+I    + G    A +L+                           KE  
Sbjct: 655 RLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEEL 714

Query: 399 TPNIYAYNAIIDGLCKKGRVQE 420
                AY+ +I+ LC +GR++E
Sbjct: 715 KTEAIAYSDVINELCSRGRLKE 736


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 229/477 (48%), Gaps = 32/477 (6%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M  +G+   T T N ++G+ C+ G ++ A E+FD+M  +G   +  S+ ++V  YCR G
Sbjct: 46  DMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAG 105

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
             ++    L  M   G   +      LI++FC +G       A +L++EM + G  P+V 
Sbjct: 106 FTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG---KTDDAEKLVDEMRKDGLSPDVV 162

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEML 354
           T    I  LC  G   +A R+F  +   +     +PN+ TY  M+ G+CKE  +  A  L
Sbjct: 163 TFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARAL 222

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            E+MK    L N  +Y   + G  ++G    A  ++  M   G  PN+Y+YN ++DGLCK
Sbjct: 223 FEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCK 282

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G + +A  L++      +  D +TYT LL  +    +  +A  +   M++ G +P+ + 
Sbjct: 283 NGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYT 342

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
              L+ +  ++ ++ E+E+  Q+    G      T   +I G   +G +  A++    M 
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMW 402

Query: 535 QIG-----------------------CAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             G                       C PD I+Y  +ISGLCK  ++ EA + +  M+GK
Sbjct: 403 THGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK 462

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
            + P         + +CK+G  ++A  +L+ ++KK     ++T N+LI  L S+ ++
Sbjct: 463 NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQI 519



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 213/480 (44%), Gaps = 31/480 (6%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F     V   ++SSF + G+  +   +V EM  +GL     T N  +   C  G V  A 
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181

Query: 209 EVFDEMCARGVCA----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
            +F +M    V      +  +Y LM+  +C+ G + EA      M     +++  +  + 
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIW 241

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +         G + +A  +L+EMV  G +PNVY++ +++DGLCK G    A R+ ++L+ 
Sbjct: 242 LLGLVR---IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA-RMLMRLMT 297

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S    P+  TYT ++ GYC   K++ A  +L  M   G  PN  T   L+Y   K G   
Sbjct: 298 SSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF--------------- 429
            A +L+  M ++G   +    N +IDGLC  G++ +A E++   +               
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 430 --------QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                   +++   D I+Y+ ++S   K     +A   F  M+   L PD   Y   I +
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC++ K+  + +  ++    G   T +TY S+I G      I         M + G +PD
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
              Y  ++S LC+  ++ +A    + M+ KGISP   +   L   +CK  D +    I E
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 207/453 (45%), Gaps = 44/453 (9%)

Query: 226 YKLMVVAYCRMGRVTEADRWL-SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           Y +++ +  + GRV +   WL   M+  G   +  T  +LI   CD    G +  A EL 
Sbjct: 24  YNVLLRSCTKEGRV-DCVSWLCKDMVASGVSPETYTFNVLIGLLCDS---GCLDDARELF 79

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           ++M  KG +PN Y+  +L+ G C+ G+T K   L L  +R   + PN   Y  +IS +CK
Sbjct: 80  DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL-LGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC----TP 400
           E K + AE L++ M++ GL P+  T+ + I   C  G    A  +   M  +       P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           NI  YN ++ G CK+G ++EA  L +K    E   ++ +Y I L   ++  +  +A  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV  G+ P++++Y  ++   C+   + ++    +   ++G+ P   TYT+++ GY   
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G +S A    + M + GC+P+N T   L+  L K+ ++ EA +  + M  KG     VT 
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIR------------------------------ 610
             +    C  G    A+ I+      +W                                
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNG----MWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           + +T+I  LC   RVG A   F +++GK+   D
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 36/437 (8%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
              IG+L E   ++ EM + G+     + N V+   C+ G++  A  +   M + GV  D
Sbjct: 245 LVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPD 304

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  ++  YC  G+V+EA+  L  M+  G   +N T  +L+ +   +G    I +A E
Sbjct: 305 TVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEG---RISEAEE 361

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------FLKLVR 324
           LL++M  KG+  +  T  ++IDGLC  G  +KA  +                  ++ LV 
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421

Query: 325 -SDNYK---PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
            SD+ K   P++ +Y+ +ISG CK  ++  A+     M  + L P++  Y   I+  CK 
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A+ ++  M K+GC   +  YN++I GL  K ++ E Y L+ +  +R +  D   Y
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             +LS   +    K A  +   M++ G++P+I +++ LI AFC+       ++ F+ A+ 
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALN 601

Query: 501 A-----GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
                  L+    T+  ++ G    G +  A + F+          N  Y  LI  LCK 
Sbjct: 602 VCGHKEALYSL--TFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKD 655

Query: 556 SKLDEACQFYESMIGKG 572
            KLD+A      +I KG
Sbjct: 656 EKLDDASGILHKLIDKG 672



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 152/359 (42%), Gaps = 42/359 (11%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+++ Y  ++    KE +++    L + M   G+ P T T+  LI   C  G  + A +L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            D M ++GC PN Y++  ++ G C+ G   +  ELL +  +     +K+ Y  L+S   K
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF----P 505
           + +T  A  L   M K GL+PD+  +   I+A C   K+ E+ + F++     +     P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMN------------------------------- 534
              TY  M+ G+ ++G +  A   F++M                                
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 535 ----QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
                +G  P+  +Y  ++ GLCK   L +A      M   G+ P  VT  TL + YC  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           G  + A  +L  + +        T N L+  L  E R+  A     K+  K   +D V+
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 150/364 (41%), Gaps = 61/364 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  + GR+ E   ++ +M   G  + T T N V+   C  G ++ A E+ + M   G
Sbjct: 346 LLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405

Query: 219 VCA-----------------------DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
             A                       D  SY  ++   C+ GRV EA +    M+ +   
Sbjct: 406 SAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQ 465

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D+A   + I +FC +G    I  AF +L++M +KG    + T+  LI GL  K    + 
Sbjct: 466 PDSAIYDVFIHSFCKEG---KISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI 522

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           + L  ++ R     P+V  Y  ++S  C+  ++  A  +L+ M ++G+ PN ++++ LI 
Sbjct: 523 YGLIDEM-RERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIK 581

Query: 376 GHCKVGNFERAYDLMD--------------------LMGKEGCTP--------------N 401
             CK  +F    ++ +                    L+G E                   
Sbjct: 582 AFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVG 641

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
            + Y  +ID LCK  ++ +A  +L K   +    D  ++  ++    K+    +A  L  
Sbjct: 642 NFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAE 701

Query: 462 RMVK 465
           +M++
Sbjct: 702 KMME 705



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 14/266 (5%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVE- 205
           N +    +    + SF + G++   F ++ +M   G      T N ++ G+  +  + E 
Sbjct: 463 NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI 522

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
           Y   + DEM  RGV  D S Y  ++ + C  GRV +A   L  ML +G   + ++ ++LI
Sbjct: 523 YG--LIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-LKLVR 324
            AFC      ++ + FE+   +   G K  +Y+ T   + L   G   KA  LF   L R
Sbjct: 581 KAFCKACDFSAVDEIFEIALNVC--GHKEALYSLT--FNELLVGGEVVKAKELFETALDR 636

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S  +      Y  +I   CK+EK++ A  +L ++ ++G   +  ++  +I G  K GN  
Sbjct: 637 S--FDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKH 694

Query: 385 RAYDL---MDLMGKEGCTPNIYAYNA 407
            A +L   M  M  EG   N    NA
Sbjct: 695 EADELAEKMMEMASEGKVKNKVHQNA 720


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 208/439 (47%), Gaps = 4/439 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   +V  M   G      TLN +V   C  G V  A  + D M   G   +  +Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+   A   L  M +R   LD    +++I   C     GS+  AF L  E
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD---GSLDNAFNLFNE 272

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG+K ++  +T LI G C  G  +   +L   +++     P+V  ++A+I  + KE 
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEG 331

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  AE L + M ++G+ P+T TYTSLI G CK    ++A  ++DLM  +GC PNI  +N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G CK   + +  EL +K   R + AD +TY  L+    +  + + A  LF  MV  
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PDI +Y  L+   C   + +++ + F++   + +      Y  +I G      +  A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  +   G  PD  TY  +I GLCK+  L EA   +  M   G SP   T   L   
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571

Query: 587 YCKQGDSATAMIILESLDK 605
           +  +GD+  +  ++E + +
Sbjct: 572 HLGEGDATKSAKLIEEIKR 590



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 214/426 (50%), Gaps = 7/426 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +M+   CR  +++ A   +  ++  G   D  T + LI   C   
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC--- 153

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A EL++ MV  G KP + T   L++GLC  G    A  L  ++V +  ++PN 
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNE 212

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  ++   CK  +   A  LL +M+E+ +  +   Y+ +I G CK G+ + A++L + 
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G   +I  Y  +I G C  GR  +  +LL+   +R++  D + ++ L+   +K+ +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  L   M++ G++PD   YT+LI  FC++ ++ ++       ++ G  P   T+  
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   I   ++ F++M+  G   D +TY  LI G C+  KL+ A + ++ M+ + 
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
           + P  V+   L    C  G+   A+ I E ++K   +L I   N +I  +C+  +V  A 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 630 LFFHKL 635
             F  L
Sbjct: 513 DLFCSL 518



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 209/465 (44%), Gaps = 63/465 (13%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++ A  +F+EM  +G  AD   Y  ++  +C  GR  +  + L  M+ R    D 
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              + LI  F  +G    +++A EL +EM+++G  P+  T+T LIDG CK+   +KA  +
Sbjct: 318 VAFSALIDCFVKEG---KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L L+ S    PN+ T+  +I+GYCK   ++    L  +M  +G++ +T TY +LI G C
Sbjct: 375 -LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G  E A +L   M      P+I +Y  ++DGLC  G  ++A E+ +K  + +++ D  
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y I++      ++   A  LFC +   G+ PD+  Y  +I   C++  + E++  F++ 
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553

Query: 499 ITAGLFPTKETYTSMI---------------------CGYLRDGN--------------- 522
              G  P   TY  +I                     CG+  D +               
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKA 613

Query: 523 -----------------------ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
                                  +  A   F+ M  +G  P+ +TY  +I GL   + + 
Sbjct: 614 GHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMIS 673

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +     + M  +G  P  VT+ T     CKQ    +A+++L  ++
Sbjct: 674 QVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 224/491 (45%), Gaps = 31/491 (6%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V+     G++ +   ++  M   G      T   V+ + C+ G    A E+  +M 
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  DA  Y +++   C+ G +  A    + M  +G   D    T LI  FC   + G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC---YAG 296

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                 +LL +M+++   P+V   + LID   K+G   +A  L  ++++     P+  TY
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTY 355

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T++I G+CKE ++++A  +L+ M  +G  PN  T+  LI G+CK    +   +L   M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN +I G C+ G+++ A EL ++   R ++ D ++Y ILL       E ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +F ++ K+ +  DI  Y  +I   C   K+ ++   F      G+ P  +TY  MI 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG------LCKQSKLDEA---CQF-- 564
           G  + G++S A   F++M + G +P+  TY  LI          K +KL E    C F  
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595

Query: 565 -----------YESMIGKGISPCEVTRVTLAYEYCKQG-----DSATAMIILESLDKKLW 608
                         M+  G  P   T  TL   +C +      D+ T    ++++  K  
Sbjct: 596 DASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655

Query: 609 IRTVNTLIRKL 619
           + T NT+I+ L
Sbjct: 656 VVTYNTVIKGL 666



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 16/380 (4%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             +L ++M  KG   N+YT +++I+  C+      AF    K+++   Y+P+  T++ +I
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLI 149

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C E +++ A  L++RM E G  P   T  +L+ G C  G    A  L+D M + G  
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y  ++  +CK G+   A ELL+K  +R+++ D + Y+I++    K      A  L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M   G   DI  YTTLI  FC   +  +  K  ++ I   + P    ++++I  +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G +  A +  + M Q G +PD +TY +LI G CK+++LD+A    + M+ KG  P   T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 580 RVTLAYEYCKQGDSATAMIILESLD--KKLWIR-------TVNTLIRKLCSEKRVGMAAL 630
              L   YCK      A +I + L+  +K+ +R       T NTLI+  C   ++ +A  
Sbjct: 390 FNILINGYCK------ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 631 FFHKLLGKDQNVDRVSLAAL 650
            F +++ +    D VS   L
Sbjct: 444 LFQEMVSRRVRPDIVSYKIL 463



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 164/397 (41%), Gaps = 39/397 (9%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF ++ RS   +P +  ++ + S   + ++ +    L ++M+ +G+  N  T + 
Sbjct: 54  DDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--------- 423
           +I   C+      A+  M  + K G  P+   ++ +I+GLC +GRV EA E         
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 424 --------------------------LLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
                                     L+ +  +   Q +++TY  +L    K  +T  A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  +M +  +  D   Y+ +I   C+   +  +   F E    G       YT++I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G      K  + M +    PD + + ALI    K+ KL EA + ++ MI +GISP  
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 578 VTRVTLAYEYCK--QGDSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT  +L   +CK  Q D A  M+ ++ S      IRT N LI   C    +      F K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
           +  +    D V+   L     E  K  +  +L Q + 
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 135/327 (41%), Gaps = 61/327 (18%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + +   + +G  +  +M+  G+   T T N ++   CELG +E A+E+F EM +R 
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 219 VCADASSYKLMVVAYCRMGRVTEA---------------------------------DRW 245
           V  D  SYK+++   C  G   +A                                 D W
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 246 --LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
               ++  +G   D  T  ++I   C KG   S+ +A  L  +M   G  PN  T+ +LI
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKG---SLSEADLLFRKMEEDGHSPNGCTYNILI 569

Query: 304 DGLCKKGWTEKAFRLFLKLVR---------------------SDNYKPNVHTYTAMISGY 342
                +G   K+ +L  ++ R                        ++P+V T+T ++  +
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPF 629

Query: 343 CKEEKMN--RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           C EE  +   A  L + MK  G  PN  TY ++I G        +   ++D M + GC P
Sbjct: 630 CLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQP 689

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKK 427
           N    +  I GLCK+     A  LL+K
Sbjct: 690 NAVTKSTFISGLCKQDLHGSAILLLRK 716



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 102/245 (41%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K + A  L + M      P    ++ L     +   ++   DL   M  +G   N+Y  +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C+  ++  A+  + K  +   + D +T++ L++    +    +AL L  RMV+ 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P +     L+   C   K+ ++       +  G  P + TY  ++    + G  + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++  ++M +     D + Y  +I GLCK   LD A   +  M  KG     +   TL   
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 587 YCKQG 591
           +C  G
Sbjct: 292 FCYAG 296



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 32/236 (13%)

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           K++Y   L   +   +   A+ LF  M ++   P +  ++ L +   R K+        +
Sbjct: 37  KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +    G+     T + MI    R   +S A     ++ ++G  PD +T+  LI+GLC + 
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
           ++ EA +  + M+  G  P  +T                                +N L+
Sbjct: 157 RVSEALELVDRMVEMGHKPTLIT--------------------------------LNALV 184

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             LC   +V  A L   +++      + V+   +     +S + AL  +L +++ E
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 240/522 (45%), Gaps = 43/522 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSM--VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           E +  +V ++ + G +     +  +    +N LP + +  N ++    +   VE A +V+
Sbjct: 135 EALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIAC-NALLNALIQQKKVEIARKVY 193

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           +EM  R  C D  S  +MV   C+  +V E  + ++    +G I +      L+  +   
Sbjct: 194 EEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWK- 252

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF------------ 319
             RG +++A  L +E+  KG+ P   T+ ++I+GLCKK   +    L             
Sbjct: 253 --RGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNV 310

Query: 320 ----------------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
                                 L+ +  +  +P++ TY  +ISG C++ K++ AE LLE 
Sbjct: 311 QVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEH 370

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
             ++GL PN  +YT LI+ +CK G   RA+DL   M ++G   ++ AY A++ GL   G 
Sbjct: 371 AIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGE 430

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V  A  +  K  +R +  D   Y +L++   K+     A  L   M+   L+ D     T
Sbjct: 431 VDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSAT 490

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+  F R  K+ E++K F+  I  G+ P    Y +MI GY + G ++ A+   QRM    
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            +PD  TY  +I G  KQ+ L  A + +  M+ +   P  VT  +L   +C+ GDS+ A 
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610

Query: 598 IILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              E +     K  + T   LI   C E ++  A  FF  +L
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELML 652



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 215/489 (43%), Gaps = 53/489 (10%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M++   +    K    +++EM   G+ +     N +V    + G      +    
Sbjct: 276 ETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRW 335

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           +   G   D ++Y  ++   CR G+V EA+  L   + RG   +  + T LI  +C +G 
Sbjct: 336 ITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQG- 394

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +AF+L   M  KG   ++  +  L+ GL   G  + A  +  K+V      P+ +
Sbjct: 395 --KCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER-GVLPDAN 451

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  +++G CK+ +++ A++LL  M  Q L  +     +L+ G  + G  + A  L +L 
Sbjct: 452 VYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELT 511

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P +  YNA+I G CK G + +A   +++    +   D+ TY+ ++  ++KQ + 
Sbjct: 512 IAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDL 571

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL LF +MVK    P++  YT+LI  FCR      +EK F+E  ++GL P   TYT +
Sbjct: 572 HNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTIL 631

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG---------------------- 551
           I  + ++G IS A  +F+ M    C P+++T+  LI+G                      
Sbjct: 632 IGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKAS 691

Query: 552 ---------------------------LCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
                                      LC    ++ A Q  + M GKGI P  V+   L 
Sbjct: 692 LMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALV 751

Query: 585 YEYCKQGDS 593
           Y  C +G S
Sbjct: 752 YGLCLEGRS 760



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 180/433 (41%), Gaps = 46/433 (10%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LLE M  K   P     + ++      G   +A  L+       NY P+V    A+++  
Sbjct: 121 LLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNAL 180

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            +++K+  A  + E M ++    +  +   ++ G CK    E    L++    +GC PNI
Sbjct: 181 IQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNI 240

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN ++DG  K+G V+ A  L K+   +       TY I+++   K+   K   GL   
Sbjct: 241 VFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVE 300

Query: 463 MVKAGLN-----------------------------------PDIHAYTTLIAAFCRQKK 487
           M + G++                                   PDI  Y TLI+  CR  K
Sbjct: 301 MKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGK 360

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+E+  + AI  GL P K +YT +I  Y + G    A   F  M + G   D + YGA
Sbjct: 361 VHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGA 420

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKK 606
           L+ GL    ++D A    + M+ +G+ P       L    CK+G  SA  ++++E L + 
Sbjct: 421 LVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQN 480

Query: 607 LWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACYESNKYALF 663
           L +      TL+       ++  A   F   + K  +   V   A +K  C    K+ + 
Sbjct: 481 LSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYC----KFGMM 536

Query: 664 SDL---SQRIAEG 673
           +D     QR+ +G
Sbjct: 537 NDALTCVQRMKDG 549


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 231/478 (48%), Gaps = 13/478 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P    T   VV   C  G +  A EV DEM  +G       Y +++ A CR G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R L AM  +G  LD     L++ A C++G    + +A  LL ++   G + ++ ++  ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGCEADIVSYNAVL 223

Query: 304 DGLC-KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            GLC  K W +    L  ++VR D   PN+ T+  +I   C+     R   +L +M E G
Sbjct: 224 KGLCMAKRWGDVE-ELMDEMVRVD-CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+   Y ++I G CK G+ E A ++++ M   G  PN+  YN ++ GLC   R +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL + FQ++   D +T+ IL+    +     + + L  +M+  G  PD+  YTT+I  F
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C++  + E+    +   + G  P   +YT ++ G    G    A +   +M Q GC P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +T+  LI+ LCK+  +++A +  + M+  G SP  ++  T+     K G +  A+ +L  
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 603 L-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           + +K +   T+  +++   L  E RV      F  +  KD  +   S A L NA   S
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI--KDTTIR--SDAVLYNAVISS 575



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 210/479 (43%), Gaps = 39/479 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  +    ++  M   G  L T   N V+   CE G V+ A  +  ++   G  AD  SY
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C   R  + +  +  M+      +  T   LI   C  G     ++  E+L +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL---FERVHEVLAQ 276

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P++  +  +IDG+CK+G  E A  + L  + S   KPNV  Y  ++ G C  E
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEI-LNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 347 KMNRAEMLL-----------------------------------ERMKEQGLLPNTNTYT 371
           +   AE LL                                   E+M   G +P+  TYT
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G CK G  + A  L+  M   GC PN  +Y  ++ GLC  GR  +A EL+ +  Q+
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               + +T+  L++   K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K +E+
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +     +  G+ P    Y+S+ C   R+G ++  ++ F  +       D + Y A+IS 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           LCK+ + D A  F+  M+  G  P E T   L      +G +  A  +L  L  +  +R
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
           V  +A ++  +V   C  GR+ +A   L  M  +G         +++ A C   GFR S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +    +LE M  KG   +     ++++ +C++G  ++A  L  KL      + ++ +Y A
Sbjct: 167 R----VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNA 221

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C  ++    E L++ M      PN  T+ +LI   C+ G FER ++++  M + G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CTP+I  Y  IIDG+CK+G ++ A E+L +     L+ + + Y  +L         K+A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +     D   +  L+  FC+   +    +  ++ ++ G  P   TYT++I G+
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  AV   + M+  GC P+ ++Y  ++ GLC   +  +A +    MI +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT                                 NTLI  LC +  V  A     ++L 
Sbjct: 462 VT--------------------------------FNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 638 KDQNVDRVSLAALKNACYESNK 659
              + D +S + + +   ++ K
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGK 511



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 8/326 (2%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y AM++GYC+  ++  A  L   +    + PN  T+  ++ G C  G    A +++D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +GC P    Y+ I++  C+ G  + +  +L+    +    D     ++L+   +Q 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+GL  ++   G   DI +Y  ++   C  K+  + E+   E +     P   T+ 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 512 SMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++I GYL R+G      +   +M++ GC PD   Y  +I G+CK+  L+ A +    M  
Sbjct: 256 TLI-GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGM 627
            G+ P  V   T+    C       A  +L  +   D  L   T N L+   C    V  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
                 ++L      D ++   + N 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVING 400



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 32/261 (12%)

Query: 407 AIIDGLCKKGRVQE---------------AYELLKKAFQRELQ--------------ADK 437
           A+I  LC  GR  E               AY  +   + R  Q               + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T+  ++     +     AL +   M   G  P    Y  ++ A CR    + S +  + 
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G          ++      G +  AV   +++   GC  D ++Y A++ GLC   +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
             +  +  + M+    +P  VT  TL    C+ G       +L  + +      IR   T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 615 LIRKLCSEKRVGMAALFFHKL 635
           +I  +C E  + +A    +++
Sbjct: 292 IIDGICKEGHLEVANEILNRM 312


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 231/478 (48%), Gaps = 13/478 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P    T   VV   C  G +  A EV DEM  +G       Y +++ A CR G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R L AM  +G  LD     L++ A C++G    + +A  LL ++   G + ++ ++  ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGCEADIVSYNAVL 223

Query: 304 DGLC-KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            GLC  K W +    L  ++VR D   PN+ T+  +I   C+     R   +L +M E G
Sbjct: 224 KGLCMAKRWGDVE-ELMDEMVRVD-CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+   Y ++I G CK G+ E A ++++ M   G  PN+  YN ++ GLC   R +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL + FQ++   D +T+ IL+    +     + + L  +M+  G  PD+  YTT+I  F
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C++  + E+    +   + G  P   +YT ++ G    G    A +   +M Q GC P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +T+  LI+ LCK+  +++A +  + M+  G SP  ++  T+     K G +  A+ +L  
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 603 L-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           + +K +   T+  +++   L  E RV      F  +  KD  +   S A L NA   S
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI--KDTTIR--SDAVLYNAVISS 575



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 210/479 (43%), Gaps = 39/479 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  +    ++  M   G  L T   N V+   CE G V+ A  +  ++   G  AD  SY
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C   R  + +  +  M+      +  T   LI   C  G     ++  E+L +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL---FERVHEVLAQ 276

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P++  +  +IDG+CK+G  E A  + L  + S   KPNV  Y  ++ G C  E
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEI-LNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 347 KMNRAEMLL-----------------------------------ERMKEQGLLPNTNTYT 371
           +   AE LL                                   E+M   G +P+  TYT
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G CK G  + A  L+  M   GC PN  +Y  ++ GLC  GR  +A EL+ +  Q+
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               + +T+  L++   K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K +E+
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +     +  G+ P    Y+S+ C   R+G ++  ++ F  +       D + Y A+IS 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           LCK+ + D A  F+  M+  G  P E T   L      +G +  A  +L  L  +  +R
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
           V  +A ++  +V   C  GR+ +A   L  M  +G         +++ A C   GFR S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +    +LE M  KG   +     ++++ +C++G  ++A  L  KL      + ++ +Y A
Sbjct: 167 R----VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNA 221

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C  ++    E L++ M      PN  T+ +LI   C+ G FER ++++  M + G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CTP+I  Y  IIDG+CK+G ++ A E+L +     L+ + + Y  +L         K+A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +     D   +  L+  FC+   +    +  ++ ++ G  P   TYT++I G+
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  AV   + M+  GC P+ ++Y  ++ GLC   +  +A +    MI +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT                                 NTLI  LC +  V  A     ++L 
Sbjct: 462 VT--------------------------------FNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 638 KDQNVDRVSLAALKNACYESNK 659
              + D +S + + +   ++ K
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGK 511



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 8/326 (2%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y AM++GYC+  ++  A  L   +    + PN  T+  ++ G C  G    A +++D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +GC P    Y+ I++  C+ G  + +  +L+    +    D     ++L+   +Q 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+GL  ++   G   DI +Y  ++   C  K+  + E+   E +     P   T+ 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 512 SMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++I GYL R+G      +   +M++ GC PD   Y  +I G+CK+  L+ A +    M  
Sbjct: 256 TLI-GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGM 627
            G+ P  V   T+    C       A  +L  +   D  L   T N L+   C    V  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
                 ++L      D ++   + N 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVING 400



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 32/261 (12%)

Query: 407 AIIDGLCKKGRVQE---------------AYELLKKAFQRELQ--------------ADK 437
           A+I  LC  GR  E               AY  +   + R  Q               + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T+  ++     +     AL +   M   G  P    Y  ++ A CR    + S +  + 
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G          ++      G +  AV   +++   GC  D ++Y A++ GLC   +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
             +  +  + M+    +P  VT  TL    C+ G       +L  + +      IR   T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 615 LIRKLCSEKRVGMAALFFHKL 635
           +I  +C E  + +A    +++
Sbjct: 292 IIDGICKEGHLEVANEILNRM 312


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 229/453 (50%), Gaps = 12/453 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ F++ GR  +   ++  M    +     + N ++   C+L     AEE+  +M +RG
Sbjct: 16  LVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75

Query: 219 --VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                D  +Y  ++  YC+ G+V E+   L  ++ RG   D    T ++ + C K  R  
Sbjct: 76  GRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLC-KSAR-- 132

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A ELLEEM+R G  P + T   LI G C++   E A  L  K+  S   K +V TY 
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS-GVKADVVTYN 191

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G CK  ++  AE LLERMK  G  P+   Y+S +YG CK G    A+ +++ M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-AFQRELQADKITYTILLSEHLKQAETKQ 455
              PN+  YN I+DGLCK G++  A E++++ A       + + Y+ ++    K   T++
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M +AG  PD+  Y++L+   C+  K++E+ +  +E    G  P   TY S++ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 516 GYLRDGNISSAVKYFQRMNQIG-----CAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           G    G ++ A +  + M+  G     C P   TY ALI GLCK  ++D+A +F++ M  
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +G  P  V+  T+     + G +  A +IL  +
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 34/475 (7%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   G P  + T N +V    + G     E + + M AR +  +  SY  ++   C++ R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 239 VTEADRWLSAMLDRG--AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
             EA+  +  M+ RG  +  D  T + L++ +C  G    ++++ ELL+E++ +G +P+ 
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAG---KVEESRELLKEVISRGLRPDA 117

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             +T ++  LCK     +A  L  +++R+    P + T+  +ISG C+E+ +  A+ LL+
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRA-GCCPTLITFNTLISGCCREKNLEMADSLLQ 176

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           +M   G+  +  TY +L+ G CK G  + A  L++ M   GC P++ AY++ + GLCK G
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAY 475
           +V +A+++L++        + +TY  +L    K  +   AL +  +M  + G   ++  Y
Sbjct: 237 KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           +T++   C+  + +E+    +    AG  P   TY+S++ G  + G I  AV+  + M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            GC P+ +TY +L+ GLC   +L EA +  E          E++       +C       
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVE----------EMSSGGGGGHHCPPS---- 402

Query: 596 AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                        + T N LI  LC   R+  A  FF ++  +  + D VS + +
Sbjct: 403 -------------VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 173/336 (51%), Gaps = 6/336 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  T+ A+++G+ K+ +    E LLE M  + + PN  +Y  L+ G CK+  +  A +L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 390 M-DLMGKEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           + D++ + G  TP++  Y+ ++ G CK G+V+E+ ELLK+   R L+ D + YT +++  
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K A   +AL L   M++AG  P +  + TLI+  CR+K ++ ++   Q+   +G+    
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY +++ G  + G +  A +  +RM   GCAPD + Y + + GLCK  K+ +A Q  E 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK----LWIRTVNTLIRKLCSEK 623
           M      P  VT  T+    CK G   TA+ ++E +       L +   +T++  LC   
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           R   A      +       D V+ ++L N   ++ K
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 69/280 (24%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + GC PN   +NA+++G  K+GR  +   LL+    R++Q                  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQ------------------ 42

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE--TY 510
                            P++ +Y  L+   C+ ++  E+E+  ++ I+ G   T +  TY
Sbjct: 43  -----------------PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTY 85

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++++ GY + G +  + +  + +   G  PD + Y  +++ LCK ++L EA +  E MI 
Sbjct: 86  STLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIR 145

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
            G  P                                 + T NTLI   C EK + MA  
Sbjct: 146 AGCCP--------------------------------TLITFNTLISGCCREKNLEMADS 173

Query: 631 FFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
              K+       D V+   L +   ++ +      L +R+
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 213/421 (50%), Gaps = 5/421 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + ++GRL +      EM +        T N ++   C+ G +    E + EM   G
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  +V A+C+   + +A ++   M   G + +  T T L+ A C  G   ++ 
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIG---NLS 290

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EM+  G + NV T+T LIDGLC     ++A +LF K+V +    PN+ +Y A+
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTA-GVIPNLASYNAL 349

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K + M+RA  LL  +K +G+ P+   Y + I+G C +   E A  +M+ M + G 
Sbjct: 350 IHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N   Y  ++D   K G   E   LL++  + + +   +T+ +L+    K     +A+ 
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469

Query: 459 LFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            F RM    GL P+   YT +I   C++ ++K +   F++    GL P +  YTS++ G 
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN 529

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           L+ GN+  A+    +M +IG   D + Y +L+ G  + ++L +A  F E MIG+ I P E
Sbjct: 530 LKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDE 589

Query: 578 V 578
           V
Sbjct: 590 V 590



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 235/526 (44%), Gaps = 46/526 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  FA++G+         +M   G      T N ++    + G +E A  +F+EM  RG
Sbjct: 104 LLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG 163

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  M+  Y ++GR+ +   +   M       D  T   LI  FC  G    + 
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSG---KLP 220

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-------------- 324
           +  E   EM + G KPNV +++ L+D  CK+   ++A + ++ + R              
Sbjct: 221 KGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280

Query: 325 ---------SDNYKP-----------NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                    SD ++            NV TYTA+I G C  E+M  AE L  +M   G++
Sbjct: 281 DANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI 340

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  +Y +LI+G  K  N +RA +L++ +   G  P++  Y   I GLC   +++ A  +
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           + +  +  ++A+ + YT L+  + K     + L L   M +      +  +  LI   C+
Sbjct: 401 MNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCK 460

Query: 485 QKKMKESEKFF-QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
            K + ++  +F + +   GL P    YT+MI G  ++  + +A   F++M Q G  PD  
Sbjct: 461 NKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRT 520

Query: 544 TYGALISGLCKQSKLDEACQFYESM--IGKGISPCEVTRVTLAYEYCKQGDSATA----M 597
            Y +L+ G  KQ  + EA    + M  IG  +     T +   +  C Q   A +    M
Sbjct: 521 AYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580

Query: 598 IILESL-DKKLWIRTVNTLIRKLCSEKRVGMAA-LFFHKLLGKDQN 641
           I  E L D+ L I  +       C ++ VG+ + L  H+LL  D N
Sbjct: 581 IGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNN 626



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 217/474 (45%), Gaps = 13/474 (2%)

Query: 209 EVFDEMCA-RGVCADA-SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +VFDE+ + R VC      +  +      +G + EA +  S M          +   L+ 
Sbjct: 47  DVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLH 106

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G    +K+ F+   +M+  G KP V+T+ ++ID + K+G  E A  LF ++ +  
Sbjct: 107 KFAKLGKTDGVKRFFK---DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM-KFR 162

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  TY +MI GY K  +++      E MK     P+  TY SLI   CK G   + 
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +    M + G  PN+ +Y+ ++D  CK+  +Q+A +      +     ++ TYT L+  
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDA 282

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K      A  L   M++ G+  ++  YT LI   C  ++MKE+EK F + +TAG+ P 
Sbjct: 283 NCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y ++I G+++  N+  A++    +   G  PD + YG  I GLC   K++ A     
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMN 402

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEK 623
            M   GI    +   TL   Y K G+    + +LE    LD ++ + T   LI  LC  K
Sbjct: 403 EMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNK 462

Query: 624 RVGMAALFFHKL---LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
            V  A  +F ++    G   N   V  A +   C E+   A  +   Q   EG+
Sbjct: 463 LVSKAIDYFGRMSNDFGLQPNA-AVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 233/541 (43%), Gaps = 43/541 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   + S   ++G L+E      +M    +   T + N ++    +LG  +  +  F +M
Sbjct: 65  VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G      +Y +M+    + G +  A      M  RG I D  T   +I  +   G  
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY---GKV 181

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +       EEM     +P+V T+  LI+  CK G   K    + ++ +S   KPNV +
Sbjct: 182 GRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS-GLKPNVVS 240

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ ++  +CKE+ M +A      M+  G +PN  TYTSL+  +CK+GN   A+ L + M 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   N+  Y A+IDGLC   R++EA +L  K     +  +  +Y  L+   +K     
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   +   G+ PD+  Y T I   C  +K++ ++    E    G+      YT+++
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 515 CGYLRDGN-----------------------------------ISSAVKYFQRM-NQIGC 538
             Y + GN                                   +S A+ YF RM N  G 
Sbjct: 421 DAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGL 480

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+   Y A+I GLCK++++  A   +E M  +G+ P      +L     KQG+   A+ 
Sbjct: 481 QPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALA 540

Query: 599 ILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           + + + +   KL +    +L+       ++  A  F  +++G++   D V    +    Y
Sbjct: 541 LRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHY 600

Query: 656 E 656
           E
Sbjct: 601 E 601


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 225/474 (47%), Gaps = 19/474 (4%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L E   +V   T+ G         +++   C  G    A  V       G   D  +Y  
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           +V  YCR GR+  A R +++M       D  T T LI   CD   RG +  A  LL++M+
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCD---RGRVGDALSLLDDML 164

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           R+  +P+V T+TVL++ +CK     +A ++ L  +R+    PN+ TY  +I+G C+E+++
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKV-LDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           + A  +L R+   G  P+T +YT+++ G C    +E    L   M +  C PN   ++ +
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +   C+ G V+ A E+L +  +    A+     I+++   KQ     A      M   G 
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC 343

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +PD  +YTT++   CR  + +++++   E +     P + T+ + IC   + G I  A+ 
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE---VTRVTLAY 585
             ++M + GC+   +TY AL++G C Q ++D A + + S+      PCE   +T  TL  
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL------PCEPNTITYTTLLT 457

Query: 586 EYCK-QGDSATAMIILESL--DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             C  +   A A ++ E +  D  L + T N L+   C +  V  A     +++
Sbjct: 458 GLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM 511



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 232/524 (44%), Gaps = 50/524 (9%)

Query: 152 AHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           A +V  C  ++ +    GR  +   ++     +G P+     N +V   C  G ++ A  
Sbjct: 67  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +   M    V  DA +Y  ++   C  GRV +A   L  ML R       T T+L+ A C
Sbjct: 127 LIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                G   QA ++L+EM  KG  PN+ T+ V+I+G+C++   + A R  L  + S  ++
Sbjct: 184 KSSGFG---QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA-RQILNRLSSYGFQ 239

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+  +YT ++ G C  ++    E+L   M E   +PN  T+  L+   C+ G  ERA ++
Sbjct: 240 PDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEV 299

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +D M + GCT N    N +I+ +CK+GRV +A+E L          D I+YT +L    +
Sbjct: 300 LDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR 359

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               + A  L   MV+    P+   + T I   C++  + ++    ++    G      T
Sbjct: 360 AGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVT 419

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY------------------------ 545
           Y +++ G+   G + SA++ F   N + C P+ ITY                        
Sbjct: 420 YNALVNGFCVQGRVDSALELF---NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMM 476

Query: 546 -----------GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                        L+S  C++  ++EA +  + M+  G +P  +T  TL     +  +S 
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536

Query: 595 TAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            A+ +L  L  K   L   T ++++  L  E R+  A   FH +
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAV 580



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 178/396 (44%), Gaps = 34/396 (8%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-------------- 319
           R  + +A  L+E    +G  P+VY  T LI  LC++G T  A R+               
Sbjct: 48  RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFA 107

Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                             +L+ S    P+ +TYT +I G C   ++  A  LL+ M  + 
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TYT L+   CK   F +A  ++D M  +GCTPNI  YN II+G+C++ RV +A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ++L +      Q D ++YT +L         +    LFC MV+    P+   +  L+  F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR   ++ + +        G          +I    + G +  A ++   M   GC+PD 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           I+Y  ++ GLC+  + ++A +    M+ K   P EVT  T     C++G    A++++E 
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 603 LDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + +    + I T N L+   C + RV  A   F+ L
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 7/396 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM  N       T + +V   C  G+VE A EV D M   G  A+ +   +++ + C+ G
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV +A  +L+ M   G   D  + T ++   C  G     + A ELL EMVRK   PN  
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG---RWEDAKELLNEMVRKNCPPNEV 383

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T    I  LC+KG  ++A  L ++ +        + TY A+++G+C + +++ A   LE 
Sbjct: 384 TFNTFICILCQKGLIDQAI-LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA---LEL 439

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
                  PNT TYT+L+ G C     + A +L+  M +  C  N+  +N ++   C+KG 
Sbjct: 440 FNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V+EA EL+++  +     + IT+  LL    +   +++AL L   +V  G++ D   Y++
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++    R+ +++E+ + F      G+ P    Y  ++    +      A+ +F  M    
Sbjct: 560 IVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS 619

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           C P+  TY  LI GL ++  L EA      +  +G+
Sbjct: 620 CMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 206/445 (46%), Gaps = 7/445 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++      R+ +   ++  +++ G    T +   V+   C     E  E +F EM    
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++ ++V  +CR G V  A   L  M + G   +     ++I + C +G    + 
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG---RVD 329

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AFE L  M   G  P+  ++T ++ GLC+ G  E A  L  ++VR  N  PN  T+   
Sbjct: 330 DAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK-NCPPNEVTFNTF 388

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++  +++A +L+E+M E G      TY +L+ G C  G  + A +L + +    C
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---C 445

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++ GLC   R+  A ELL +  Q +   + +T+ +L+S   ++   ++A+ 
Sbjct: 446 EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  P++  + TL+         +E+ +     ++ G+     TY+S++    
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+  I  AV+ F  +  +G  P  + Y  ++S LCK+ + D A  F+  M+     P E 
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T V L     ++G    A  +L  L
Sbjct: 626 TYVILIEGLAREGLLKEARYVLSEL 650



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 202/444 (45%), Gaps = 7/444 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + +   +RG   D      ++   CR GR ++A R L      GA +D      L+ 
Sbjct: 54  AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C  G    +  A  L+  M      P+ YT+T LI GLC +G    A  L   ++R +
Sbjct: 114 GYCRYG---RLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             +P+V TYT ++   CK     +A  +L+ M+ +G  PN  TY  +I G C+    + A
Sbjct: 168 -CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +++ +   G  P+  +Y  ++ GLC   R ++   L  +  +     +++T+ +L+  
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++A+ +  RM + G   +      +I + C+Q ++ ++ +F     + G  P 
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +YT+++ G  R G    A +    M +  C P+ +T+   I  LC++  +D+A    E
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
            M   G S   VT   L   +C QG   +A+ +  SL  +    T  TL+  LC  +R+ 
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLD 466

Query: 627 MAALFFHKLLGKDQNVDRVSLAAL 650
            AA    +++  D  ++ V+   L
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVL 490



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 7/313 (2%)

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + +  A  L+ER   +G  P+    T LI   C+ G    A  ++      G   +++AY
Sbjct: 49  DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ G C+ GR+  A  L+       +  D  TYT L+     +     AL L   M++
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
               P +  YT L+ A C+     ++ K   E    G  P   TY  +I G  R+  +  
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +   R++  G  PD ++Y  ++ GLC   + ++    +  M+     P EVT   L  
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVR 285

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +C+ G    A+ +L+ + +          N +I  +C + RV  A  F + +     + 
Sbjct: 286 FFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345

Query: 643 DRVS-LAALKNAC 654
           D +S    LK  C
Sbjct: 346 DTISYTTVLKGLC 358



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++      RL     ++ EM  N  PL   T N +V   C+ G VE A E+  +M   G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++          EA   L  ++ +G  LD  T + ++           I+
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL---SREDRIE 571

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++   +   G +P    +  ++  LCK+  T++A   F  +V S++  PN  TY  +
Sbjct: 572 EAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMV-SNSCMPNESTYVIL 630

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I G  +E  +  A  +L  +  +G+L
Sbjct: 631 IEGLAREGLLKEARYVLSELCSRGVL 656



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 3/144 (2%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           RD +++ A +  +R    G APD      LI  LC++ +  +A +   +  G G +P +V
Sbjct: 48  RD-DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSG-APVDV 105

Query: 579 -TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
               TL   YC+ G    A  ++ S+       T   LIR LC   RVG A      +L 
Sbjct: 106 FAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 638 KDQNVDRVSLAALKNACYESNKYA 661
           ++     V+   L  A  +S+ + 
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFG 189


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 200/363 (55%), Gaps = 5/363 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   ++ A  +F EM  +G+  +  +Y  ++   C  GR ++A R LS M++R    D 
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI AF  +G    + +A +L +EMV++   P++ T++ LI+G C     ++A ++
Sbjct: 327 FTFSALIDAFVKEG---KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  +V    + P+V +Y+ +I G+CK ++++    L   M ++GL+ NT TYT+LI G  
Sbjct: 384 FEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G+ + A ++   M  +G  PNI  YN ++DGLCK G++++A  + +   + +++    
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY I++    K  + +    LFC +   G+ PD+ AY T+I+ FCR+   +E++  F+E 
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P    Y ++I   LRDG+  ++ +  + M   G A D  T G L++ +    +L
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621

Query: 559 DEA 561
           D++
Sbjct: 622 DKS 624



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 214/417 (51%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  ++  A   L  M+  G   +  TL+ L+  +C  
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                I +A  L+++M   G++PN  T   LI GL       +A  L  ++V +   +P+
Sbjct: 165 K---RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-AKGCQPD 220

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +++G CK    + A +LL +M++  L P    YT++I G CK  + + A +L  
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFK 280

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  Y+++I  LC  GR  +A  LL    +R++  D  T++ L+   +K+ 
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  L+  MVK  ++P I  Y++LI  FC   ++ E+++ F+  ++   FP   +Y+
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYS 400

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
           G+ P  +T  TL    CK G    AM++ E L +   +  I T N +I  +C   +V
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 13/451 (2%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ E  ++V +M   G    T T N ++           A  + D M 
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
           A+G   D  +Y ++V   C+ G    A   L+ M    L+ G ++     T +I   C  
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI----YTTIIDGLCKN 269

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +  A  L +EM  KG +PNV T++ LI  LC  G    A RL   ++      P+
Sbjct: 270 K---HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPD 325

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  + C P++ +Y+ +I G CK  RV E  EL ++  QR L  + +TYT L+    +  
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  +F  MV  G+ P+I  Y TL+   C+  K++++   F+    + + PT  TY 
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G  + G +      F  ++  G  PD + Y  +ISG C++   +EA   ++ M   
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565

Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
           G  P      TL     + GD  A+A +I E
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 183/357 (51%), Gaps = 4/357 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N YT+++LI+  C++     A  +  K+++   Y+PN+ T +++++GY
Sbjct: 103 LGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGY 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++++ A  L+++M   G  PNT T+ +LI+G         A  L+D M  +GC P++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++GLCK+G    A+ LL K  Q +L+   + YT ++    K      AL LF  
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T++++I  ++++G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K +  M +    P  +TY +LI+G C   +LDEA Q +E M+ K   P  V+  T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           L   +CK       M +   + ++  +    T  TLI+ L       MA   F +++
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 167/364 (45%), Gaps = 8/364 (2%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF ++V+S  + P++  ++ ++S   K  K +    L E+M+  G+  N  TY+ 
Sbjct: 63  DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  ++  M K G  PNI   +++++G C   R+ EA  L+ + F   
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q + +T+  L+       +  +A+ L  RMV  G  PD+  Y  ++   C++     + 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               +     L P    YT++I G  ++ ++  A+  F+ M   G  P+ +TY +LIS L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
           C   +  +A +    MI + I+P   T   L   + K+G    A  + + + K+     I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSD 665
            T ++LI   C   R+  A   F  ++ K    D VS + L     ++ +      LF +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 666 LSQR 669
           +SQR
Sbjct: 422 MSQR 425



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E K++ A  L   M +    P+   ++ L+    K+  F+    L + M   G   N Y 
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+ +I+  C++ ++  A  +L K  +   + + +T + LL+ +       +A+ L  +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  P+   + TLI       K  E+       +  G  P   TY  ++ G  + G+  
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A     +M Q    P  + Y  +I GLCK   +D+A   ++ M  KGI P  VT  +L 
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 585 YEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C  G  + A  +L + +++K+   + T + LI     E ++  A   + +++ +  +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 642 VDRVSLAALKNA 653
              V+ ++L N 
Sbjct: 359 PSIVTYSSLING 370



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 42/264 (15%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L + +   A+ LF  MVK+   P I  ++ L++A  +  K        ++    G+    
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH 116

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ +I  + R   +  A+    +M ++G  P+ +T  +L++G C   ++ EA    + 
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 568 MIGKGISPCEVTRVTLAY-----------------------------------EYCKQGD 592
           M   G  P  VT  TL +                                     CK+GD
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 593 SATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
           +  A I+L  +++   +  +    T+I  LC  K +  A   F ++  K    + V+ ++
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 650 LK----NACYESNKYALFSDLSQR 669
           L     N    S+   L SD+ +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIER 320


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 196/392 (50%), Gaps = 4/392 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C++  +E A +V + M ARG   D  +Y +M+ + C   ++  A   L  +L 
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
              +    T T+LI A       G I +A +LLEEM+ +G  P++YT+  +I G+CK+G 
Sbjct: 211 DNCMPTVITYTILIEATI---VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E+A  L   L  S   +P+V +Y  ++  +  + K +  E L+  M  +G  PN  TY+
Sbjct: 268 VERAAELITSLT-SKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  + A  ++ +M ++  TP+ Y+Y+ +I  LCK+GR+  A  ++      
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + Y  +L+   K     QAL +F ++   G  P++ +Y T+I+A         +
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 446

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                  I+ G+ P + TY S+I    RDG +  A+     M Q G  P  I+Y  ++ G
Sbjct: 447 LGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LCK  ++D+A   +  MI KG  P E T + L
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 538



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 197/378 (52%), Gaps = 7/378 (1%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I+ FC       I+ A ++L  M  +G+ P++ T+ ++I  LC +     A  +  +L+
Sbjct: 153 VISGFCKVN---QIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL 209

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             DN  P V TYT +I     E  +N A  LLE M  +GLLP+  TY ++I G CK G  
Sbjct: 210 L-DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ERA +L+  +  +GC P++ +YN ++     +G+  E  +L+ + F R  + +K+TY+IL
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   +     +A+ +   M++  L PD ++Y  LI+A C++ ++  +       I+ G 
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y +++    ++GN + A++ F ++  +GC P+  +Y  +IS L        A  
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
              +MI KGI P E+T  +L    C+ G    A+ +L+ +++  +  TV   N ++  LC
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508

Query: 621 SEKRVGMAALFFHKLLGK 638
             +R+  A   F +++ K
Sbjct: 509 KVRRIDDAIGMFAEMIEK 526



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 4/221 (1%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           LL+   K  +  ++L     +V  G  PD+   T LI  F   K ++++ +   E + + 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    Y ++I G+ +   I +A +   RM   G  PD +TY  +I  LC + KL  A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKL 619
              + ++     P  +T   L      +G    AM +LE +  +  +    T N +IR +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
           C E  V  AA     L  K    D +S   L  A     K+
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKW 303


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 231/478 (48%), Gaps = 15/478 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S  +I       S+  ++  NG+     TL  ++   C  G + +   +  ++   G
Sbjct: 16  ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ ++  ++   C  G+  EA  +   ++  G  LD  +  +L+   C  G   +  
Sbjct: 76  YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM 135

Query: 279 QAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           Q       M+RK W   +V  ++ +ID LCK  +   A+RL+ +++    + PNV+T++ 
Sbjct: 136 Q-------MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIF-PNVYTFSI 187

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK+ K  +A  LL  M ++G+ PN  TY +++ G+C V    +A ++ ++M +EG
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN++ YN II+GLCKK RV EA  L K+   +++  D +TY IL+    K  +   +L
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   G   DI  Y +L+ A C+   + ++    +E    G+ P   TYT++I G 
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +DG +  A   FQ +   G      TY  +I+GLCK+   DEA      M      P  
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427

Query: 578 VTRVTLAYEYCKQGDSATA-----MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
           V+  T+ Y   ++G++         +I+  L K+L  +   T I  L ++K    A+L
Sbjct: 428 VSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADL-NDKWAAYASL 484



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 39/378 (10%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            TLT+L+  +C     G I   F +L ++++ G++PN  T T LI G+C  G   +A  L
Sbjct: 46  VTLTILMNCYC---HTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-L 101

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F   V +  +K +  +Y  +++G CK   M      ++ +++  +  +   Y+++I   C
Sbjct: 102 FHDHVVAHGFKLDQVSYAILMNGLCK---MGETRAAMQMLRKTWVNADVVMYSTIIDSLC 158

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      AY L   M  +G  PN+Y ++ ++D LCK  + ++A  LL    ++ ++ + +
Sbjct: 159 KGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  ++  +    +  +AL +F  MV+ G+ P++  Y  +I   C++K++ E+   F+E 
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   TY  +I G  + G IS++++    M  IG   D ITY +L+  LCK   L
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
           D+A    + +  +GI P            C                      T  TLI  
Sbjct: 339 DQAITLVKEIKDQGIQP----------NVC----------------------TYTTLIDG 366

Query: 619 LCSEKRVGMAALFFHKLL 636
           LC + R+  A + F ++L
Sbjct: 367 LCKDGRLEDAYVIFQEIL 384



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 154/348 (44%), Gaps = 37/348 (10%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P +  +  +++   K      A  L  +++  G+ P+  T T L+  +C  G     + +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  + K G  PN   +  +I G+C  G+  EA            + D+++Y IL++   K
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 450 QAETKQALG--------------------------------LFCRMVKAGLNPDIHAYTT 477
             ET+ A+                                 L+  M+  G+ P+++ ++ 
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI 187

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+ A C+ +K K++       +  G+ P   TY +++ GY     ++ A+  F  M Q G
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+   Y  +I+GLCK+ ++DEA   ++ M  K I+P  VT   L    CK G  +T++
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 598 IILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +++   S+ K + I T N+L+  LC    +  A     ++  KDQ +
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI--KDQGI 353



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 109/289 (37%), Gaps = 39/289 (13%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP I  +N I+  L K      A  L ++     ++   +T TIL++ +           
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++K G  P+   +TTLI   C   +  E+  F    +  G    + +Y  ++ G  
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 519 RDGN--------------------------------ISSAVKYFQRMNQIGCAPDNITYG 546
           + G                                 ++ A + +  M   G  P+  T+ 
Sbjct: 127 KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILE 601
            L+  LCK  K  +A      M+ KG+ P  VT   +   YC       A+     ++ E
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 602 SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++  +W    N +I  LC +KRV  A   F ++  K  N D V+   L
Sbjct: 247 GVEPNVW--CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++    P I  +  ++A+  +      +   F++    G+ P+  T T ++  Y   G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           I+       ++ ++G  P++IT+  LI G+C   +  EA  F++ ++  G    +V+   
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGMAALFFHKLLGK 638
           L    CK G++  AM +L    +K W+       +T+I  LC  K V  A   + +++ K
Sbjct: 121 LMNGLCKMGETRAAMQML----RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 242/502 (48%), Gaps = 16/502 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  +G+     T N +V   C+   V  A ++ DEM  +G   D  +Y  +V A C +G
Sbjct: 159 NMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLG 218

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV EA   LSA     A    A+   +I A C + FR  +++ F ++ +MV +G +PNV 
Sbjct: 219 RVDEATEVLSA-----APPVAASYNAVILALC-REFR--MQEVFAVVGDMVGRGLQPNVI 270

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T +++  CK G    A  +  ++V +    PNV T+TA++ G   + +++ A  + + 
Sbjct: 271 TYTTIVNAFCKAGELRMACAILARMVIT-GCTPNVATFTALVGGLFNDGRVHDALDMWKC 329

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G  P+T +Y  LI G C VG+ + A  +++ M + GC PN   Y+ +IDG  K G 
Sbjct: 330 MVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGD 389

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A  +     +   + + + YT ++    K+    QA  L  +M+     P+   + T
Sbjct: 390 LDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNT 449

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI + C  +++  +   F E    G  P   TY  ++ G  R+GN   A++    M   G
Sbjct: 450 LIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHG 509

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
                +TY  ++SGLC+     EA  F   MI +GI P   T   + + YCK+G+   A 
Sbjct: 510 IELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAA 569

Query: 598 IILESLD-----KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            IL +++     + + + T+  L+ +LC++ ++  A ++  K+L +    + V+   L  
Sbjct: 570 WILGAMNVVNCGRNILVYTI--LMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVR 627

Query: 653 ACYESNKYALFSDLSQRIAEGI 674
             + +      SD  Q IA  I
Sbjct: 628 GVFRNLGCNNPSDFIQHIAMDI 649



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 4/375 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V++F + G L+   +++  M   G     +T   +VG     G V  A +++  M A G
Sbjct: 275 IVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG 334

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 SY +++   C +G +  A   L+ M   G   +  T + LI  F      G + 
Sbjct: 335 WAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKA---GDLD 391

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +  +M R G KPNV  +T ++   CKK    +A  L  K++  +N  PN  T+  +
Sbjct: 392 GAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKML-VENCPPNTVTFNTL 450

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C   ++ RA  +   M+  G  PN  TY  L++G  + GN   A  ++  M   G 
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  YN ++ GLC+    +EA   + +   R +Q D  T+T ++  + K+ E + A  
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAW 570

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M       +I  YT L+A  C Q K++++  +  + +  G++P   T+  ++ G  
Sbjct: 571 ILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVF 630

Query: 519 RDGNISSAVKYFQRM 533
           R+   ++   + Q +
Sbjct: 631 RNLGCNNPSDFIQHI 645



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 159/389 (40%), Gaps = 39/389 (10%)

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS-DNYKPNV-HTYTAMISG 341
           L+EM  +G           +    + G  ++A + F + V      +P     Y  +I  
Sbjct: 84  LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDA 143

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             +E  +    ++   M++ G+ PN  TY  L+   C+      A  ++D M  +GC P+
Sbjct: 144 LLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPD 203

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKA------------------------------FQR 431
              Y  I+  LC  GRV EA E+L  A                                R
Sbjct: 204 DVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGR 263

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            LQ + ITYT +++   K  E + A  +  RMV  G  P++  +T L+       ++ ++
Sbjct: 264 GLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDA 323

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              ++  +  G  P+  +Y  +I G    G++  A      M Q GC P+  TY  LI G
Sbjct: 324 LDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDG 383

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK-----QGDSATAMIILESLDKK 606
             K   LD A   +  M   G  P  V    +   +CK     Q +S    +++E+    
Sbjct: 384 FSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPN 443

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               T NTLIR LC+ +RVG A   FH++
Sbjct: 444 --TVTFNTLIRSLCNCRRVGRALGVFHEM 470


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 226/484 (46%), Gaps = 25/484 (5%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++ +E+    +     ++ +++ AY + G   +A      M D G   D  T   ++   
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
             K        A  +  +M++  + PN  T  +L++GLCK G T+ A ++F ++ +    
Sbjct: 177 VQKEV---FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK-GI 232

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN   YT ++SG C+ ++ +    LL  MK  G  P++ T  +L+ G CK+G  + A+ 
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+ L  KEG    I  Y+++IDGL +  R  E  E  +K F+  ++ D + YTIL+    
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +      AL +   M + GL+PD + Y  LI  FC    + ++     E      FPT  
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ-FYES 567
           TYT +ICG  R+G +  A + F +M  +GC+P  +T+ ALI GLCK  +L+EA   FY+ 
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 568 MIGKGISPCEVTRV--------------TLAYEYCKQGDSATAMIILESL-DKKLW--IR 610
            IGK  +P    R+              T+    C+ G    A  +L  L D  +   I 
Sbjct: 473 EIGK--NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIM 530

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQR 669
           T N LI   C  K +  A   F +L  K  + D V+   L +  +  ++    F  L Q 
Sbjct: 531 TYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590

Query: 670 IAEG 673
           +  G
Sbjct: 591 VKNG 594



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 239/531 (45%), Gaps = 26/531 (4%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           N N  RA  V+  +++   + G+  +   M  EMT  G+P  T     ++   C+    +
Sbjct: 196 NYNPNRATFVI--LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + + M   G C D+ +   ++  +C++G++ EA   L      G +L     + LI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 266 TAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
               D  FR     +  E   +M + G +P+V  +T+LI G C+ G  + A  +   + +
Sbjct: 314 ----DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                P+ + Y A+I G+C    +++A  L   + +    P + TYT LI G C+ G  +
Sbjct: 370 R-GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--------FQRELQ-A 435
            A  + + M   GC+P+I  +NA+IDGLCK G ++EA  L  K         F R  Q A
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488

Query: 436 DKITYTILLSEHLKQ----AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           D++  T  L   +++        +A  L  ++  +G+ PDI  Y  LI  FC+ K +  +
Sbjct: 489 DRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGA 548

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            K F+E    G  P   TY ++I G+ R      A +   +M + GC P +  Y  L++ 
Sbjct: 549 FKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL---W 608
            C++ KL  A   +   + + +   E   + LA E+ ++G+   A+  L  ++ KL    
Sbjct: 609 SCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFE 667

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
           I      +  LC  +R   A   F  L     +V+  S   L N  C + N
Sbjct: 668 IAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGN 718



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 178/421 (42%), Gaps = 51/421 (12%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE+G+V+YA  + ++M  RG+  D   Y  ++  +C +G + +A      +        +
Sbjct: 352 CEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTS 411

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI   C  G     +Q F  +E +   G  P++ T   LIDGLCK G  E+A  L
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQMENL---GCSPSIMTFNALIDGLCKAGELEEARHL 468

Query: 319 FLKLVRSDN------------------------------------YK-----------PN 331
           F K+    N                                    YK           P+
Sbjct: 469 FYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPD 528

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +I+G+CK + +N A  L   ++ +G  P++ TY +LI G  +V   E A+ ++D
Sbjct: 529 IMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLD 588

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K GCTP+   Y  ++   C+KG++  A+ L  K + R L + +     L  EH ++ 
Sbjct: 589 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK-YLRSLPSQEDETLKLAEEHFEKG 647

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           E ++A+     M     N +I  YT  +   C+ ++ +E+ K F       +     +  
Sbjct: 648 ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV 707

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I G  +DGN+  AV  F    + G          L+  L  Q K+  A      M   
Sbjct: 708 MLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSA 767

Query: 572 G 572
           G
Sbjct: 768 G 768



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 17/355 (4%)

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +GA + N  LT++ T          ++ A E L   +         +  ++ D + ++  
Sbjct: 33  QGAAISNEVLTVMETV-------NPMEDALEKLAPFL---------SSEIVNDVMREQRR 76

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E  FR F+   R  +++  V T+  +I    K++  +    +LE +K   +     T++
Sbjct: 77  PELGFRFFIWTTRRRSFRSWV-THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFS 135

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI  + K G  E+A +    M   GC P+++ YN+I+  + +K     A  +  +  + 
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               ++ T+ ILL+   K  +T  AL +F  M + G+ P+   YT +++  C+ K+  + 
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +       +G  P   T  +++ G+ + G I  A    Q   + G       Y +LI G
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           L +  + DE  ++   M   GI P  V    L   +C+ G    A+ +L  + ++
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 7/273 (2%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N +ID L K       +++L++     +Q    T+++L++ + K    ++A+  F +M
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              G  PD+  Y +++    +++    +   + + +     P + T+  ++ G  ++G  
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+K F  M Q G  P+ + Y  ++SGLC+  + D+  +   +M   G  P  +T   L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +CK G    A  +L+  +K+   L I+  ++LI  L   KR      +  K+     
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337

Query: 641 NVDRVSLAALKNACYESN--KYAL--FSDLSQR 669
             D V    L     E     YAL   +D++QR
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 123/296 (41%), Gaps = 32/296 (10%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +Q MV    E G + + + +++++ ++G+     T N ++   C+   +  A ++F E+ 
Sbjct: 497 LQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ 556

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF-- 273
            +G   D+ +Y  ++  + R+ R  +A R L  M+  G    +A    L+T  C KG   
Sbjct: 557 LKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLS 616

Query: 274 -----------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                                        +G +++A   L EM  K     +  +T+ + 
Sbjct: 617 VAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLI 676

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC+   +E+A ++FL +++      N  +   +I+G CK+  +  A  +     E+G +
Sbjct: 677 GLCQARRSEEALKIFL-VLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFM 735

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
                   L+         + A DL++ M   G   + Y ++ I   L    + QE
Sbjct: 736 LMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQE 791


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I+ FC K  R  I+ A  +L+ M RKG+ P+V TH ++I   C KG  + A ++F +L+
Sbjct: 50  VISGFC-KANR--IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           + +N KP + TYT +I  Y  E  ++ A  LL+ M  +GL P+T TY  +  G CK G  
Sbjct: 107 KDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           +RA++ +  +   GC P++  YN ++  L  +G+  E  + + + F R  + + +TY+IL
Sbjct: 167 DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSIL 226

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   +  + ++++ L   M + GL PD + Y  LIAAFCR+ K+  + +F    I  G 
Sbjct: 227 ISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGF 286

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y +++    ++GN   AV+ F +++++GC P+  +Y  ++S L        A  
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALG 346

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
               M+ KGI P  +T  +L    C+ G    A+ +L  +    +   I +  T++  LC
Sbjct: 347 MISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLC 406

Query: 621 SEKRVGMA 628
              R+  A
Sbjct: 407 KAHRIDDA 414



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 5/413 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML- 250
           N V+   C+   +E A+ V D M  +G   D  ++ +M+  +C  G++  A +    +L 
Sbjct: 48  NAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK 107

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           D        T T+LI A+      G I +A +LL+EM+ +G +P+ +T+ V+  GLCK+G
Sbjct: 108 DNNCKPTLITYTILIEAYI---LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEG 164

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             ++AF  F++ + S   KP+V TY  ++     + K +  E  +  +  +G  PN  TY
Sbjct: 165 KVDRAFE-FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTY 223

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           + LI   C+ G  E + +L+ +M ++G TP+ Y Y+ +I   C++G++  A E L     
Sbjct: 224 SILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMIC 283

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                D + Y  +++   K      A+ +F ++ + G  P++ +Y T+++A         
Sbjct: 284 DGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYR 343

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +     + ++ G+ P   TY S+I    RDG +  A+     M      P+ ++Y  ++ 
Sbjct: 344 ALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLL 403

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           GLCK  ++D+A +   +MI  G  P E T   L       G    AM +  SL
Sbjct: 404 GLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 196/396 (49%), Gaps = 7/396 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F +  R++   +++  M   G      T N ++G  C  G ++ A +VF+E+    
Sbjct: 50  VISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDN 109

Query: 219 VCADA-SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            C     +Y +++ AY   G + EA + L  ML RG   D  T  ++    C +G    +
Sbjct: 110 NCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEG---KV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +AFE +  +  +G KP+V T+ +L+  L  +G W E     ++  + S   +PNV TY+
Sbjct: 167 DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG--EKWMSEIFSRGCEPNVVTYS 224

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +IS  C++ K+  +  L++ MKE+GL P+   Y  LI   C+ G  + A + +D M  +
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+I  YN I+  LCK G    A E+  K  +     +  +Y  +LS      +  +A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           LG+  +M+  G++PD+  Y +LI+  CR   + E+     + ++    P   +Y +++ G
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             +   I  A++    M + GC P+  TY  LI G+
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 215/454 (47%), Gaps = 41/454 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F E   L++   +  EM  +G      T   ++   C+ G ++ A     EM   G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD   Y  ++  +C  G +         +L+RG      T   LI  FC     G +K
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---LGQLK 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ E M+ +G +PNVYT+T LIDGLC  G T++A +    ++  D  +PN  TY  +
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE-EPNAVTYNII 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I+  CK+  +  A  ++E MK++   P+  TY  L+ G C  G+ + A  L+ LM K+  
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418

Query: 398 -CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++ +YNA+I GLCK+ R+ +A ++     ++    D++T  ILL+  LK  +  +A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478

Query: 457 L-----------------------------------GLFCRMVKAGLNPDIHAYTTLIAA 481
           +                                   GL C+M  + L P +  Y  L+++
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C++  + ++ + F+E      FP   ++  MI G L+ G+I SA      M++ G +PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             TY  LI+   K   LDEA  F++ M+  G  P
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 221/486 (45%), Gaps = 38/486 (7%)

Query: 107 LANE-AGSMVALSFFYW---------------AIGFAKFRHFMRLY--IVCATSLISNGN 148
           LANE  GS  + S   W               A+GF K   FM L   +V  TSLI    
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR--- 255

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
                         F + G L  G ++  E+   G      T N ++   C+LG ++ A 
Sbjct: 256 -------------GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+F+ M  RGV  +  +Y  ++   C +G+  EA + L+ M+++    +  T  ++I   
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKL 362

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G    +  A E++E M ++  +P+  T+ +L+ GLC KG  ++A +L   +++  +Y
Sbjct: 363 CKDGL---VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 329 -KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V +Y A+I G CKE ++++A  + + + E+    +  T   L+    K G+  +A 
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L   +       N   Y A+IDG CK G +  A  LL K    ELQ     Y  LLS  
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+    QA  LF  M +    PD+ ++  +I    +   +K +E        AGL P  
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ +I  +L+ G +  A+ +F +M   G  PD     +++     Q + D+  +  + 
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 568 MIGKGI 573
           ++ K I
Sbjct: 660 LVDKDI 665



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 208/471 (44%), Gaps = 46/471 (9%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +  EM    +  D  SY  ++  +C    + +A    + M   G      T  +LI 
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RS 325
           AFC     G + +A   L+EM   G + ++  +T LI G C  G  ++   LF +++ R 
Sbjct: 221 AFCKA---GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           D+  P   TY  +I G+CK  ++  A  + E M E+G+ PN  TYT LI G C VG  + 
Sbjct: 278 DS--PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A   ++LM ++   PN   YN II+ LCK G V +A E+++   +R  + D ITY ILL 
Sbjct: 336 ALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395

Query: 446 EHLKQAETKQALGLFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQ---EAIT 500
               + +  +A  L   M+K     +PD+ +Y  LI   C++ ++ ++   +    E + 
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455

Query: 501 AG--------------------------------LFPTKETYTSMICGYLRDGNISSAVK 528
           AG                                +    +TYT+MI G+ + G ++ A  
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              +M      P    Y  L+S LCK+  LD+A + +E M      P  V+   +     
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575

Query: 589 KQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           K GD  +A  +L  + +      + T + LI +      +  A  FF K++
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 3/330 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF +L  M+++G+  NVY H +L+ GLC+     KA  L L+ +R ++  P+V +Y  +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL-LREMRRNSLMPDVFSYNTVI 184

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C+ +++ +A  L   MK  G   +  T+  LI   CK G  + A   +  M   G  
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            ++  Y ++I G C  G +     L  +  +R      ITY  L+    K  + K+A  +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M++ G+ P+++ YT LI   C   K KE+ +     I     P   TY  +I    +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCK 364

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG--ISPCE 577
           DG ++ AV+  + M +    PDNITY  L+ GLC +  LDEA +    M+       P  
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           ++   L +  CK+     A+ I + L +KL
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKL 454



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 8/399 (2%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGL--CKKGWTEKAFRL-FLKLVRSDNYKPNVHTYTAM 338
           EL     RK  + + + + V + GL  C     +  F    L L+    +  NV+ +  +
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  +  +A  LL  M+   L+P+  +Y ++I G C+    E+A +L + M   GC
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + ++  +  +ID  CK G++ EA   LK+     L+AD + YT L+       E  +   
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +++ G +P    Y TLI  FC+  ++KE+ + F+  I  G+ P   TYT +I G  
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G    A++    M +    P+ +TY  +I+ LCK   + +A +  E M  +   P  +
Sbjct: 329 GVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 579 TRVTLAYEYCKQG--DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
           T   L    C +G  D A+ ++ L   D       + + N LI  LC E R+  A   + 
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            L+ K    DRV+   L N+  ++       +L ++I++
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 207/420 (49%), Gaps = 14/420 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MVSS  + G++ +      E+     P +    N ++   C+ G +E A ++  EM   G
Sbjct: 220 MVSSLCKAGKIDDAR----ELAGRFKPSV-PVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG--FRGS 276
           V  +  SY  ++ + C  G V  A    + M  RG   +  T T LI     KG   RG 
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLI-----KGCFMRGK 329

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A +L + M++ G +PNV  +  LI GLC  G  E+A ++  ++ RS    PNV TY+
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL-PNVTTYS 388

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+ K   +  A     RM   G  PN  TYT ++   CK   F++A  L++ M  E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GCTPN   +N  I GLC  GRV+ A +LL++        +  TY  LL    +  + ++A
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GLF  +    L P++  Y T++  F R   M E+ + F +A+  G  P   TY +MI  
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 517 YLRDGNISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y + G +  A +  +R++ +    PD ITY +LI G C    ++EA  F +  I +GI P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 242/531 (45%), Gaps = 22/531 (4%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
            ++  C+++ +  +G  ++   M   +   G        N ++         +    ++ 
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G+  +  +Y +++ A C+  RV  A +    M ++G   D  T T ++++ C  G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I  A EL        +KP+V  +  LIDG+CK+G  E A +L  +++  +   PNV
Sbjct: 229 ---KIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM-DNGVDPNV 279

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+ +I+  C    +  A  L  +M  +G   N +T+T LI G    G    A DL  L
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++GC PN+ AYN +I GLC  G ++EA ++  +  +     +  TY+IL+    K  +
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A   + RM+  G  P++  YT ++   C+     ++    ++    G  P   T+ +
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            I G   +G +  A+K  +RM   GC P+  TY  L+  L + +K +EA   ++ +  + 
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCSEKRV 625
           + P  VT  T+ Y + + G    A+     L  K  +R       T NT+I   C + +V
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEAL----QLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 626 GMAALFFHKLLG-KDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
            +AA    ++   K+ + D ++  +L   AC   N     + L + I +GI
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 203/405 (50%), Gaps = 7/405 (1%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F+ +  V   ++    + GR++    ++ EM +NG+     + + ++   C  G VE 
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLI 265
           A  +F +M  RG  A+  ++  ++      G++ EA D W   M+  G   +      LI
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDGCEPNVVAYNTLI 356

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C     GS+++A ++ ++M R G  PNV T+++LIDG  K G    A   + +++ S
Sbjct: 357 HGLCSN---GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI-S 412

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              +PNV TYT M+   CK    ++A  L+E+M  +G  PNT T+ + I G C  G  E 
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L++ M   GC PNI  YN ++D L +  + +EA+ L ++   R LQ + +TY  +L 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF- 504
              +     +AL LF + +  G  PD   Y T+I A+C+Q K+K + +  +   +   + 
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           P   TYTS+I G     NI  A+ +  +    G  P+  T+ AL+
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 26/317 (8%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            F  +  S+ ++    TY  MI    +E +M+  + +L++MK  G+    + +  +I G+
Sbjct: 60  FFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGY 119

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            +VG+ E+A  +   +G+ GC P +  YN ++D L  + + Q    L     +  L  + 
Sbjct: 120 KRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNV 179

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY ILL    K      A  LF  M   G  PD   YTT++++ C+  K+ ++ +    
Sbjct: 180 FTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL--- 236

Query: 498 AITAGLF-PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
              AG F P+   Y ++I G  ++G I  A+K    M   G  P+ ++Y  +I+ LC   
Sbjct: 237 ---AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-------- 608
            ++ A   +  M  +G      T   L      +G       + E+LD  LW        
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK------LYEALD--LWKLMIQDGC 345

Query: 609 ---IRTVNTLIRKLCSE 622
              +   NTLI  LCS 
Sbjct: 346 EPNVVAYNTLIHGLCSN 362


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 200/413 (48%), Gaps = 6/413 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++    + G + +A          G  +D  T T ++           I++A  L+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNK---KIQEAVALM 57

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E++   G  P + T+  L++GLCK G  E+A  L  K+V  +   P+V TYT++I G  K
Sbjct: 58  EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-DNGCTPDVVTYTSLIDGLGK 116

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           +++   A  L + M  +GL  +T  YT+LI G  + G   +A  +   M  +GC P++  
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 176

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            + +IDGLCK GR+  A  + K    R L  +++ Y+ L+    K  +   AL +  +M 
Sbjct: 177 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           KA   PD   Y  LI   C+   +  +  FF E + AG  P   TY  +I G+ + GN  
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 296

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +A   F  M+   C+P+ +TYG LISGLCK+ +L +A  +Y+ M  +G  P      +L 
Sbjct: 297 AACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356

Query: 585 YEYCKQGDSATAMIILESLDKKLWI--RTVNTLIRKLCSEKRVGMAALFFHKL 635
              CK G      ++ + +++      +T   LI  LC   RV  A   F+ +
Sbjct: 357 DGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAI 409



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 206/415 (49%), Gaps = 5/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + G L +  S+  E T NG  +   T   +V    +   ++ A  + +++ A G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                ++Y  ++   C+MGR+ EA   L  ++D G   D  T T LI      G +    
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL---GKKKRSF 121

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A++L +EM  +G   +   +T LI GL + G   +A  ++ K + S    P+V T + M
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY-KTMTSQGCVPDVVTLSTM 180

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A  + + M+ +GL PN   Y++LI+G CK    + A +++  M K  C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+   YN +IDGLCK G V  A     +  +   + D  TY IL+S   K   T  A G
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  M  +  +P++  Y TLI+  C+++++ ++  ++Q     G  P    Y+S++ G  
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G +      F  M + G A ++ T   LI  LCK +++DEA   + ++  +G+
Sbjct: 361 KSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T ++LI+GL K G   +A  L  +   ++    ++HTYT ++    K +K+  A  L+E+
Sbjct: 1   TFSILINGLVKAGMLIQAHSL-AQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEK 59

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           +   G  P   TY +L+ G CK+G  E A DL+  +   GCTP++  Y ++IDGL KK R
Sbjct: 60  ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             EAY+L K+   R L  D + YT L+   L+  +  QA  ++  M   G  PD+   +T
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I   C+  ++  + + F+     GL P +  Y+++I G  +   +  A++   +M +  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C PD ITY  LI GLCK   +  A  F++ M+  G  P   T   L   +CK G++  A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            + + +        + T  TLI  LC  +++  A+L++  +  +    D    ++L +  
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 655 YESNK 659
            +S K
Sbjct: 360 CKSGK 364



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 6/339 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  R  E + +  EM + GL L T     ++    + G +  A  V+  M ++G
Sbjct: 110 LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 169

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +   M+   C+ GR+  A R   +M  RG   +    + LI   C       + 
Sbjct: 170 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR---KMD 226

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+L +M +    P+  T+ +LIDGLCK G    A   F +++ +   KP+V+TY  +
Sbjct: 227 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA-GCKPDVYTYNIL 285

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+CK    + A  + + M      PN  TY +LI G CK     +A      M + GC
Sbjct: 286 ISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y++++DGLCK G+++    L  +  +R   A+  T T L+    K     +A+ 
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDE-MERSGVANSQTRTRLIFHLCKANRVDEAVS 404

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           LF  + K G+ P  +AY ++I+A  +  K+ E +  +QE
Sbjct: 405 LFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQE 442


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 200/391 (51%), Gaps = 7/391 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    VV   C+ G V+ A  + DEM   GV  +A  Y  ++  Y R         
Sbjct: 132 PLAASV---VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQE 188

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M + G      T T+L+ +    G    I +   +++EM  K    +VY +T +I+
Sbjct: 189 LLEIMENGGIEATVGTYTILVDSLSTAG---DISKVEAVVDEMKAKNVAGDVYLYTAVIN 245

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             C+ G   +A  +F + V  +  +PN  TY  +I+G+CK  +M  AEMLL  M+ +G+ 
Sbjct: 246 AYCRAGNVRRASEVFDECV-GNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   + ++I G+C+ G  + A  +   M K G   ++Y YN +  GLC+  R+ EA  L
Sbjct: 305 HNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTL 364

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    ++ +  + +TYT L+S H K+ +  +A  LF  M   G  P +  Y  ++  + +
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  ++E+E+F +E    GL P   TY S++ G+  +G +  A+K F+ M   G  P+ + 
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ALISGL K+ + +EA Q Y+ M+  G++P
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDMLKAGLTP 515



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 4/378 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V  +C+ GRV +A   L  M   G  L+      L+  +  +     ++   ELLE M
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQ---ELLEIM 193

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G +  V T+T+L+D L   G   K     +  +++ N   +V+ YTA+I+ YC+   
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISK-VEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           + RA  + +     G+ PN  TY  LI G CK+G  E A  L+  M   G   N   +N 
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDG C++G V  A ++     +  ++ D  TY  L     +     +A  L   M++ G
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P+   YTTLI+  C++  M E+ + F+E    G  P+  TY  M+ GY++ G+I  A 
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           ++ + M + G  PD  TY +L+ G C   K+D A + +E M  +G  P  V    L    
Sbjct: 433 RFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGL 492

Query: 588 CKQGDSATAMIILESLDK 605
            K+G S  A  + + + K
Sbjct: 493 AKEGRSEEAFQLYDDMLK 510



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 192/401 (47%), Gaps = 4/401 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F + GR+ +  +++ EM  +G+ L     N ++            +E+ + M   G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A   +Y ++V +    G +++ +  +  M  +    D    T +I A+C  G   +++
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAG---NVR 254

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ +E V  G +PN  T+ VLI+G CK G  E A  + L  ++      N   +  M
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAA-EMLLADMQGRGVGHNQIIFNTM 313

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC++  ++ A  +   M++ G+  +  TY +L  G C+V     A  L+ +M ++G 
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +I   CK+G + EA  L ++   +      +TY +++  ++K+   ++A  
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M K GL PD++ Y +L+   C   K+  + K F+E    G  P    YT++I G  
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           ++G    A + +  M + G  PD+  Y AL+  L   ++ D
Sbjct: 494 KEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 173/372 (46%), Gaps = 23/372 (6%)

Query: 130 RHFMRLYIVCATSLIS-------------------NGNFERAHEVMQCMVSSFAEIGRLK 170
           RH +RL  +C  SL+                    NG  E        +V S +  G + 
Sbjct: 160 RHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDIS 219

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +  ++V EM    +         V+   C  G V  A EVFDE    G+  +  +Y +++
Sbjct: 220 KVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLI 279

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
             +C++G++  A+  L+ M  RG   +      +I  +C +G    +  A ++   M + 
Sbjct: 280 NGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGM---VDNALKVKAAMEKM 336

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G + +VYT+  L  GLC+     +A +  L ++      PN  TYT +IS +CKE  M  
Sbjct: 337 GIELDVYTYNTLACGLCRVNRMAEA-KTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVE 395

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L   M  +G +P+  TY  ++ G+ K G+   A      M K+G  P++Y Y +++ 
Sbjct: 396 ARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVH 455

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G C  G+V  A +L ++   R  + + + YT L+S   K+  +++A  L+  M+KAGL P
Sbjct: 456 GHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTP 515

Query: 471 DIHAYTTLIAAF 482
           D   Y+ L+ + 
Sbjct: 516 DDSLYSALVGSL 527



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 162/335 (48%), Gaps = 16/335 (4%)

Query: 90  IDIDSLTHEQAITVVASLANE--AGSMVALSFFYWAIGFA-----KFRHFMRLYIVCATS 142
           I +DSL+    I+ V ++ +E  A ++    + Y A+  A       R    ++  C   
Sbjct: 207 ILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC--- 263

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
            + NG  E        +++ F +IG+++    ++ +M   G+       N ++   C  G
Sbjct: 264 -VGNG-IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQG 321

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           +V+ A +V   M   G+  D  +Y  +    CR+ R+ EA   L  M+++G   +  T T
Sbjct: 322 MVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYT 381

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI+  C +G    + +A  L  EM  KG  P+V T+ V++DG  KKG   +A R F K 
Sbjct: 382 TLISIHCKEG---DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER-FRKE 437

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +      P+V+TY +++ G+C   K++ A  L E MK +G  PN   YT+LI G  K G 
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
            E A+ L D M K G TP+   Y+A++  L    R
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNR 532



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 8/374 (2%)

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           +V++DG CK G  + A  L  ++ R    + N   Y +++  Y + +   R + LLE M+
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRH-GVRLNALCYNSLLDCYVRRKDDARVQELLEIME 194

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G+     TYT L+      G+  +   ++D M  +    ++Y Y A+I+  C+ G V+
Sbjct: 195 NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVR 254

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A E+  +     ++ ++ TY +L++   K  + + A  L   M   G+  +   + T+I
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +CRQ  +  + K        G+     TY ++ CG  R   ++ A      M + G  
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+ +TY  LIS  CK+  + EA + +  M GKG  P  VT   +   Y K+G    A   
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434

Query: 600 LESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            + ++KK  +  V T   L+   C   +V +A   F ++  +    + V+  AL +   +
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494

Query: 657 SNK----YALFSDL 666
             +    + L+ D+
Sbjct: 495 EGRSEEAFQLYDDM 508


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 237/535 (44%), Gaps = 63/535 (11%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +G ++E   +  ++   G+ +     N ++    + G  E   E + EM   G  +DA++
Sbjct: 169 VGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANT 228

Query: 226 YKL--MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
             +  ++ A+C  G+V      L+  L  G    N T   LI  FC      S+    E+
Sbjct: 229 ETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMS---EV 285

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           L  M+ +   P +YT+  +I+GLCK     +A+R+F  L +   Y P+   YT MI G C
Sbjct: 286 LHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL-KDRGYAPDRVMYTTMIHGLC 344

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           +      A  L   M ++G+ PN  TY ++++G  K G+FERA +L + M  +G      
Sbjct: 345 EMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTV 404

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
             N II  LC +G+  EA+E+ KK  +  +QAD ITY  L+    K+ +  + + L   +
Sbjct: 405 TCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNEL 464

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V     P +  Y  LI   C+    + +++   +  + GL P   TY +M+ G L+ G+ 
Sbjct: 465 VAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDF 524

Query: 524 -----------------------------------SSAVKYFQRMNQIGCAPDNITYGAL 548
                                                A + F++M++ G   D ITY +L
Sbjct: 525 EHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSL 584

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           I G CK+ K+ ++      ++ +G+ P   +  +L  + C+ GD+ +A        K+LW
Sbjct: 585 IRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA--------KRLW 636

Query: 609 IRTVNT-----------LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
              V+            LI  LC +   G A     +L+G  +N  +   AA ++
Sbjct: 637 GDMVSKGIEPHANLREHLISGLCKQ---GRATEGMDRLMGMLENKIKPKKAAFED 688



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 203/457 (44%), Gaps = 39/457 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E + C++ +F + G++  G+ ++ +    GL     T N+++   C+        EV   
Sbjct: 229 ETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHT 288

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M AR       +Y+ ++   C+     EA R  + + DRG   D    T +I   C+   
Sbjct: 289 MIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCE--- 345

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG---------------------------- 305
            GS  +A +L  EM+ KG +PN YT+  ++ G                            
Sbjct: 346 MGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVT 405

Query: 306 -------LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
                  LC +G +++AF +F K+  +   + +  TY ++I G+CKE K++    LL  +
Sbjct: 406 CNKIISELCSRGKSDEAFEVFKKMSET-GIQADAITYNSLIRGFCKEGKVDERMNLLNEL 464

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             Q   P+ + Y  LI   CK G+FE A  L+  M  +G  PN Y Y+ ++ G  K G  
Sbjct: 465 VAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDF 524

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +   EL  +   +       T   ++SE   + ++ +A  +F +M + G+  D   Y +L
Sbjct: 525 EHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSL 584

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  FC++ K+ +S     E +  GL P+  +Y S+I    ++G+  SA + +  M   G 
Sbjct: 585 IRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGI 644

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            P       LISGLCKQ +  E       M+   I P
Sbjct: 645 EPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 11/469 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           +++L + V   C +G +E A EV+ ++   G+     +   ++    + G+      +  
Sbjct: 156 SASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQ 215

Query: 248 AMLDRGAILDNATLTL--LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            M+  G   D  T T+  LI AFCD G    + + +ELL + ++ G  P   T+  LI G
Sbjct: 216 EMIKAGTASDANTETVGCLIQAFCDSG---QVARGYELLNQFLKTGLDPGNPTYNKLIAG 272

Query: 306 LCK-KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            C+ K +   +  L   + R  N+ P ++TY  +I+G CK E+   A  +   +K++G  
Sbjct: 273 FCQAKNYASMSEVLHTMIAR--NHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   YT++I+G C++G+F  A  L   M  +G  PN Y YN ++ G  K G  + A EL
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +   +      +T   ++SE   + ++ +A  +F +M + G+  D   Y +LI  FC+
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + K+ E      E +     P+   Y  +I    +DG+  +A +    M+  G  P+  T
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  ++ G  K    +   + Y     KG      T   +  E C +G S  A  + + + 
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570

Query: 605 K---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +   K    T N+LIR  C E +VG +    ++L+ +       S A+L
Sbjct: 571 ETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASL 619



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 4/355 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    E+G   E   +  EM + G+     T N ++  + + G  E A E+++EMC +G
Sbjct: 339 MIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKG 398

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +   ++   C  G+  EA      M + G   D  T   LI  FC +G    + 
Sbjct: 399 YGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG---KVD 455

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   LL E+V +  +P+V  + +LI   CK G  E A RL L  + S    PN +TY  M
Sbjct: 456 ERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRL-LGDMSSKGLHPNAYTYDTM 514

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G  K         L      +G    T T   +I   C  G  + A ++   M + G 
Sbjct: 515 LHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGI 574

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   YN++I G CK+G+V ++  LL +   + LQ    +Y  L+ +  +  + + A  
Sbjct: 575 KADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKR 634

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           L+  MV  G+ P  +    LI+  C+Q +  E        +   + P K  +  +
Sbjct: 635 LWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 5/294 (1%)

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G +P++ +    +   C VG  E A ++   + + G   +I A N+I+ G  K G+ +  
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 422 YELLKKAFQRELQADKITYTI--LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +E  ++  +    +D  T T+  L+       +  +   L  + +K GL+P    Y  LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           A FC+ K      +     I     PT  TY  +I G  ++     A + F  +   G A
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD + Y  +I GLC+     EA + +  M+ KG+ P   T  T+ +   K GD   A  +
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 600 LESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              +  K +     T N +I +LCS  +   A   F K+       D ++  +L
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSL 444



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 12/217 (5%)

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVK--AGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           D I+  +L    L     + A     +MV+  AG  PD  +    +   C    ++E+ +
Sbjct: 123 DPISSNMLFEALLDAKAVRAA-----KMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIE 177

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD--NITYGALISG 551
            + +   AG+  +     S++ G L+ G      +++Q M + G A D    T G LI  
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQA 237

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
            C   ++    +     +  G+ P   T   L   +C+  + A+   +L ++  +  + T
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297

Query: 612 VNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           + T   +I  LC  +    A   F+ L  +    DRV
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRV 334


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 207/420 (49%), Gaps = 14/420 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MVSS  + G++ +      E+     P +    N ++   C+ G +E A ++  EM   G
Sbjct: 220 MVSSLCKAGKIDDAR----ELAGRFKPSV-PVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG--FRGS 276
           V  +  SY  ++ + C  G V  A    + M  RG   +  T T LI     KG   RG 
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLI-----KGCFMRGK 329

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A +L + M++ G +PNV  +  LI GLC  G  E+A ++  ++ RS    PNV TY+
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL-PNVTTYS 388

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G+ K   +  A     RM   G  PN  TYT ++   CK   F++A  L++ M  E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GCTPN   +N  I GLC  GRV+ A +LL++        +  TY  LL    +  + ++A
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GLF  +    L P++  Y T++  F R   M E+ + F +A+  G  P   TY +MI  
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 517 YLRDGNISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y + G +  A +  +R++ +    PD ITY +LI G C    ++EA  F +  I +GI P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 242/531 (45%), Gaps = 22/531 (4%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
            ++  C+++ +  +G  ++   M   +   G        N ++         +    ++ 
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   G+  +  +Y +++ A C+  RV  A +    M ++G   D  T T ++++ C  G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I  A EL        +KP+V  +  LIDG+CK+G  E A +L  +++  +   PNV
Sbjct: 229 ---KIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM-DNGVDPNV 279

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y+ +I+  C    +  A  L  +M  +G   N +T+T LI G    G    A DL  L
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++GC PN+ AYN +I GLC  G ++EA ++  +  +     +  TY+IL+    K  +
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A   + RM+  G  P++  YT ++   C+     ++    ++    G  P   T+ +
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            I G   +G +  A+K  +RM   GC P+  TY  L+  L + +K +EA   ++ +  + 
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCSEKRV 625
           + P  VT  T+ Y + + G    A+     L  K  +R       T NT+I   C + +V
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEAL----QLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 626 GMAALFFHKLLG-KDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
            +AA    ++   K+ + D ++  +L   AC   N     + L + I +GI
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 248/579 (42%), Gaps = 36/579 (6%)

Query: 39  FLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHE 98
           F A +   AF  T+S+       +   C M +  Y  Q           +++D  +   +
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQ----------QMKMDGINCCED 110

Query: 99  QAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQC 158
             I ++        +  AL  FY  IG    +  +R+Y     +L+S   F+  + +   
Sbjct: 111 LFICIINGYKRVGSAEQALKMFY-RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTN 169

Query: 159 M---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           M               + +  +  R+     + +EM+N G P    T   +V   C+ G 
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A E+     A         Y  ++   C+ GR+  A + L  M+D G   +  + + 
Sbjct: 230 IDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I + C     G+++ AF L  +M  +G   N++T T LI G   +G   +A  L+ KL+
Sbjct: 285 IINSLC---VSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLM 340

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             D  +PNV  Y  +I G C    +  A  + ++M+  G LPN  TY+ LI G  K G+ 
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A +  + M   GC PN+  Y  ++D LCK     +A  L++K        + IT+   
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +         + A+ L  RM   G  P+I  Y  L+ A  R  K +E+   FQE     L
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY +++ G+ R G +  A++ F +    G APD+ITY  +I   CKQ K+  A Q
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580

Query: 564 FYESMIG-KGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             E +   K   P  +T  +L +  C   +   AM  L+
Sbjct: 581 LVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 203/405 (50%), Gaps = 7/405 (1%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F+ +  V   ++    + GR++    ++ EM +NG+     + + ++   C  G VE 
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLI 265
           A  +F +M  RG  A+  ++  ++      G++ EA D W   M+  G   +      LI
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDGCEPNVVAYNTLI 356

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G   S+++A ++ ++M R G  PNV T+++LIDG  K G    A   + +++ S
Sbjct: 357 HGLCSNG---SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI-S 412

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              +PNV TYT M+   CK    ++A  L+E+M  +G  PNT T+ + I G C  G  E 
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L++ M   GC PNI  YN ++D L +  + +EA+ L ++   R LQ + +TY  +L 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF- 504
              +     +AL LF + +  G  PD   Y T+I A+C+Q K+K + +  +   +   + 
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           P   TYTS+I G     NI  A+ +  +    G  P+  T+ AL+
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 12/409 (2%)

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           +G  CE+ +V+Y   +  +M   G+      +  ++  Y R+G   +A +    + + G 
Sbjct: 84  LGRECEMDMVQY---ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGC 140

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                    L+ A   +      +    L   M + G  PNV+T+ +L+  LCK    + 
Sbjct: 141 KPTVRIYNHLLDALLSEN---KFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A +LF+++  +    P+  TYT M+S  CK  K++ A  L  R K     P+   Y +LI
Sbjct: 198 AHKLFVEM-SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALI 251

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G CK G  E A  L+  M   G  PN+ +Y+ II+ LC  G V+ A+ L  + F R   
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           A+  T+T L+     + +  +AL L+  M++ G  P++ AY TLI   C    ++E+ + 
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             +   +G  P   TY+ +I G+ + G++  A + + RM   GC P+ +TY  ++  LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            S  D+A    E M  +G +P  +T  T     C  G    AM +LE +
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 140/311 (45%), Gaps = 32/311 (10%)

Query: 142 SLISNGNFERAHEV---MQ------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPL 186
            L SNG+ E A +V   MQ             ++  FA+ G L         M ++G   
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL 246
              T   +V + C+  + + A  + ++M   G   +  ++   +   C  GRV  A + L
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
             M   G + +  T   L+ A     FR    ++AF L +E+  +  +PN+ T+  ++ G
Sbjct: 478 ERMQGHGCLPNITTYNELLDAL----FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 306 LCKKGWTEKAFRLFLK-LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER---MKEQ 361
             + G   +A +LF K LVR     P+  TY  MI  YCK+ K+  A  L+ER   MKE 
Sbjct: 534 FSRAGMMGEALQLFGKALVRGT--APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII----DGLCKKGR 417
              P+  TYTSLI+G C   N E A   +D    +G  PN   +NA++    D L   G 
Sbjct: 592 H--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGP 649

Query: 418 VQEAYELLKKA 428
           +    ++L+K 
Sbjct: 650 IHILDDILRKG 660


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 244/527 (46%), Gaps = 49/527 (9%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSM---VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           E +  ++ ++A++G + +   +   V+++ +N LP  T   N ++ +  +   +E A ++
Sbjct: 134 EALSDVLCAYADVGLVDKALEVYHGVVKL-HNSLP-STYACNSLLNLLVKHRRIETAHQL 191

Query: 211 FDEMCARG----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +DEM  R     +C D  +  +MV   C  GR+ +  + + +   +G + +      LI 
Sbjct: 192 YDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLID 251

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---- 322
            +C KG    ++ A++L +++  KG+ P + T   L++G CK G  E    L L++    
Sbjct: 252 GYCKKG---EVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308

Query: 323 ----------VRSDNYK--------------------PNVHTYTAMISGYCKEEKMNRAE 352
                     +    YK                    P++ TY  +I+ +C   ++  AE
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAE 368

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            LLE+   +GL PN  TYT L++G+CK G + +A D +  M   G   ++ +Y A+I GL
Sbjct: 369 KLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGL 428

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
              G V  A  +  +   R +  D   Y +L++   K+ +   A  +   M+   + PD 
Sbjct: 429 VVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDA 488

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y TL+  F R   + E++K FQ  I  GL P    Y  MI G+ + G + +A+    +
Sbjct: 489 FVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDK 548

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M +    PD  T+  +I G  KQ  ++   + +  M+ +   P  VT  +L   YC++G+
Sbjct: 549 MRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGE 608

Query: 593 SATA---MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           +  A     ++ S   K  + T + LI   C E ++G A  +F  +L
Sbjct: 609 TKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 23/516 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV      GR+++G  ++      G        N ++   C+ G VE A ++F ++  +G
Sbjct: 214 MVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKG 273

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  +V  +C+MG     D  L  M DRG  ++      +I A    GF   IK
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGF--DIK 331

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A + L+EM     +P++ T+  LI+  C +G  E+A +L  + +R     PN  TYT +
Sbjct: 332 -AKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRR-GLAPNKLTYTPL 389

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYCK+ +  +A   L  M   GL  +  +Y +LI+G    G  + A  + D M   G 
Sbjct: 390 VHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGI 449

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN +++GL KKG++  A  +L +   + +  D   Y  L+   ++     +A  
Sbjct: 450 LPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKK 509

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +++ GL+P +  Y  +I  F +   M  +     +   A   P   T++++I GY+
Sbjct: 510 LFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYV 569

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +  N+++ +K F  M +  C P+ +TY +LI+G C++ +   A + +  M   G+ P  V
Sbjct: 570 KQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVV 629

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           T   L   +CK+     A+   E +           LI K C+          FH L+  
Sbjct: 630 TYSILIGSFCKEAKLGKAVSYFELM-----------LINK-CTPNDAA-----FHYLVNG 672

Query: 639 DQNVDRVSLAALKNACYESNKYALFSD-LSQRIAEG 673
             N    +++   N  +E N  ++F D  S+ I +G
Sbjct: 673 FTNTKATAVSREPNNLHE-NSRSMFEDFFSRMIGDG 707



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 237/538 (44%), Gaps = 32/538 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G ++  + +  ++   G      T   +V   C++G+ E  + +  EM  RG
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   Y  ++ A  ++G   +A   L  M +     D  T   LI  FC    RG ++
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS---RGEVE 365

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LLE+ +R+G  PN  T+T L+ G CK+G   KA    +++  S   + ++ +Y A+
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTS-GLEVDMISYGAL 424

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G     +++ A  + +RM  +G+LP+ N Y  L+ G  K G    A  ++  M  +  
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  ++DG  + G + EA +L +   ++ L    + Y +++    K      A+ 
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              +M +A   PDI  ++T+I  + +Q  M    K F   +     P   TYTS+I GY 
Sbjct: 545 CIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYC 604

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G    A K F  M   G  P  +TY  LI   CK++KL +A  ++E M+    +P + 
Sbjct: 605 RKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDA 664

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKL-------------------WIRTV---NTLI 616
                A+ Y   G + T    +      L                   W +     N ++
Sbjct: 665 -----AFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCIL 719

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
             LC ++ V  A    +K+L      D VS  AL +  C E N     + +S  + EG
Sbjct: 720 ICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEG 777



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 204/444 (45%), Gaps = 20/444 (4%)

Query: 174 SMVIEMTNNGLPLITST---LNRVVGIACELGLVEYAEEVFDEMCARGVCA--DASSYKL 228
           S+    T + +P+I  T   L+R+  +  ELGL     + FD      +    + +SY  
Sbjct: 51  SLQTHFTESDIPIIDVTHFVLDRINDV--ELGL-----KFFDWASKNSLSGSLNGTSYSS 103

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++    R     E +  L  M  +  I     L+ ++ A+ D G    + +A E+   +V
Sbjct: 104 LLKLLSRFRVFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGL---VDKALEVYHGVV 160

Query: 289 R-KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---NVHTYTAMISGYCK 344
           +     P+ Y    L++ L K    E A +L+ +++  DN      + +T + M+ G C 
Sbjct: 161 KLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCL 220

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           + ++     L+E    +G +PN   Y +LI G+CK G  E AY L   +  +G  P +  
Sbjct: 221 KGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQT 280

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           + ++++G CK G  +    LL +   R L  +   Y  ++    K     +A      M 
Sbjct: 281 FGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMS 340

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +    PD+  Y TLI  FC + +++E+EK  ++ I  GL P K TYT ++ GY + G  +
Sbjct: 341 ENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYT 400

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A  Y   M+  G   D I+YGALI GL    ++D A    + M+ +GI P       L 
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460

Query: 585 YEYCKQGDSATAMIIL-ESLDKKL 607
               K+G  + A ++L E LD+ +
Sbjct: 461 NGLFKKGKLSMAKVMLTEMLDQNI 484



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/322 (19%), Positives = 123/322 (38%), Gaps = 35/322 (10%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE------MTNNGLPLIT 188
           +Y       I +GN + A ++ Q ++    + G +  G++++I+      M +N +  I 
Sbjct: 490 VYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV--GYNVMIKGFSKSGMMDNAILCID 547

Query: 189 S-----------TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
                       T + ++    +   +    ++F  M  +    +  +Y  ++  YCR G
Sbjct: 548 KMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKG 607

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
               A++  S M   G      T ++LI +FC +   G     FEL   M+     PN  
Sbjct: 608 ETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFEL---MLINKCTPNDA 664

Query: 298 THTVLIDGLCKKGWT-------------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
               L++G      T                F  F   +  D +      Y  ++   C+
Sbjct: 665 AFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQ 724

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           +  +  A  L  +M   GL  +  ++ +LI+G C  GN +   +++     EG       
Sbjct: 725 QRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALK 784

Query: 405 YNAIIDGLCKKGRVQEAYELLK 426
           Y+  +D    +G + EA  +L+
Sbjct: 785 YSLELDKFIPEGGISEASGILQ 806


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 212/444 (47%), Gaps = 33/444 (7%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA------- 242
           T N ++   C    V+ A ++FD+M  RG   D  SY  ++   C  GR+ EA       
Sbjct: 190 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 249

Query: 243 ---DRWLSAMLDRGAILDNATL----TLLITAFCDKGFRGSI----------------KQ 279
              D  + A L +G  L NA       L++    + G+R S                 K+
Sbjct: 250 DQPDMHMYAALVKG--LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKE 307

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A E+L+EM  KG  P V T T +I+  CK+G    A R+ L+L++    KPNV TY A++
Sbjct: 308 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV-LELMKLRGCKPNVWTYNALV 366

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C E K+++A  LL +M+  G+ P+  TY  LI G C  G+ E A+ L+ LM  +G  
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            + Y YNA+I+ LCK GR  +A  L      R ++ + +T+  L++   K  +   A   
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +MV AG  PD + Y++ I   C+ K  +E   F  E +   + P+   YT +I   L+
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 546

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           + N     + +  M   GC PD +TY   +   C + +L+EA      M   G++   + 
Sbjct: 547 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606

Query: 580 RVTLAYEYCKQGDSATAMIILESL 603
             TL   +   G +  A+ IL+ +
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQM 630



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 219/451 (48%), Gaps = 11/451 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V       R +EG  M+  M   G    T     VV   C     + AEE+  EM  +G
Sbjct: 260 LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 319

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +   ++ AYC+ GR+++A R L  M  RG   +  T   L+  FC++G    + 
Sbjct: 320 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVH 376

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL +M   G  P+  T+ +LI G C  G  E AFRL L+L+  D    + +TY A+
Sbjct: 377 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNAL 435

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  CK+ + ++A  L + ++ +G+ PN  T+ SLI G CK G  + A+  ++ M   GC
Sbjct: 436 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 495

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+ Y Y++ I+ LCK    QE    + +  Q++++   + YTI++ + LK+        
Sbjct: 496 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 555

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV +G NPD+  YTT + A+C + ++ E+E    E    G+      Y +++ G+ 
Sbjct: 556 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 615

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G    AV   ++M  +   P+  TY  L+  L +   +++      + + K I   E+
Sbjct: 616 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI---EL 672

Query: 579 TRVTLAYEYCKQGD----SATAMIILESLDK 605
           T V   ++  K+ +    S T   ILE   +
Sbjct: 673 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 703



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 201/443 (45%), Gaps = 12/443 (2%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYA 207
           F+R    +   +S FA +  L     +   M  +  P  T+ T N V+   C    +  A
Sbjct: 116 FDRPFASLLAHLSRFA-LAPL--ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARA 172

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
                 M   G   DA ++  ++V YCR  +V  A      M  RG   D  +   LI  
Sbjct: 173 LRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEG 232

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C+ G    I +A EL  EM     +P+++ +  L+ GLC     E+   L L+ ++   
Sbjct: 233 LCEAG---RIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGL-LMLRRMKELG 284

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           ++P+   Y A++   C+E K   AE +L+ M E+GL P   T T++I  +CK G    A 
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            +++LM   GC PN++ YNA++ G C +G+V +A  LL K     +  D +TY +L+   
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
                 + A  L   M   GL  D + Y  LI A C+  +  ++   F    T G+ P  
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+ S+I G  + G    A K+ ++M   GC PD  TY + I  LCK     E   F   
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 568 MIGKGISPCEVTRVTLAYEYCKQ 590
           M+ K + P  V    + ++  K+
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKE 547



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 200/496 (40%), Gaps = 58/496 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++ + GR+ +   ++  M   G      T N +V   C  G V  A  + ++M A G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA +Y L++   C  G +  A R L  M   G I D  T   LI A C  G      
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG---RTD 446

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  L + +  +G KPN  T   LI+GLCK G  + A++   K+V S    P+ +TY++ 
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV-SAGCTPDTYTYSSF 505

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK +        +  M ++ + P+T  YT +I+   K  N+         M   GC
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y   +   C +GR+ EA  +L +  +  +  D + Y  L+  H    +T  A+ 
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI--------TAGLF------ 504
           +  +M      P+   Y  L+    R + +++        +          GLF      
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 685

Query: 505 ---PTKETYTSMICGYLRDGNISSAVKYFQRMN--------------------------- 534
              P   TY+S++ G+  DG    A      M                            
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 745

Query: 535 --------QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
                   Q G  P  ++Y  L+SGL  + + D+A + + +   K  SP E+    +   
Sbjct: 746 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 805

Query: 587 YCKQG--DSATAMIIL 600
             K+G  D +  MII+
Sbjct: 806 LIKKGHSDISREMIIM 821



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 138/327 (42%), Gaps = 23/327 (7%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA--EEVFDEMCARGVCADASSYK 227
           +EG S + EM    +    ST+N  + I   L    Y      + EM + G   D  +Y 
Sbjct: 516 QEGLSFIGEMLQKDVK--PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             + AYC  GR+ EA+  L  M   G  +D      L+      G       A  +L++M
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG---QTDHAVSILKQM 630

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL----------------FLKLVRSDNYKPN 331
                 PN +T+ +L+  L +    E    L                   +++ + + PN
Sbjct: 631 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 690

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY++++ G+ ++ +   A  L+  MKE  +  N + YT+L+   CK   +  A+ L+ 
Sbjct: 691 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 750

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P + +Y  ++ GL  +G+  +A E+   +  ++   D+I + +++   +K+ 
Sbjct: 751 SMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 810

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +  +  +   + +    P    Y  L
Sbjct: 811 HSDISREMIIMLERMNCRPSHQTYAML 837


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 208/439 (47%), Gaps = 4/439 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   +V  M   G      TLN +V   C  G V  A  + D M   G   +  +Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+   A   L  M +R   LD    +++I   C  G   S+  AF L  E
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG---SLDNAFNLFNE 272

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG+K ++  +T LI G C  G  +   +L   +++     P+V  ++A+I  + KE 
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEG 331

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+  AE L + M ++G+ P+T TYTSLI G CK    ++A  ++DLM  +GC PNI  +N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+G CK   + +  EL +K   R + AD +TY  L+    +  + + A  LF  MV  
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PDI +Y  L+   C   + +++ + F++   + +      Y  +I G      +  A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  +   G  PD  TY  +I GLCK+  L EA   +  M   G SP   T   L   
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571

Query: 587 YCKQGDSATAMIILESLDK 605
           +  +GD+  +  ++E + +
Sbjct: 572 HLGEGDATKSAKLIEEIKR 590



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 214/426 (50%), Gaps = 7/426 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+  +  +  +M+   CR  +++ A   +  ++  G   D  T + LI   C   
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC--- 153

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A EL++ MV  G KP + T   L++GLC  G    A  L  ++V +  ++PN 
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNE 212

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  ++   CK  +   A  LL +M+E+ +  +   Y+ +I G CK G+ + A++L + 
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G   +I  Y  +I G C  GR  +  +LL+   +R++  D + ++ L+   +K+ +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  L   M++ G++PD   YT+LI  FC++ ++ ++       ++ G  P   T+  
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   I   ++ F++M+  G   D +TY  LI G C+  KL+ A + ++ M+ + 
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
           + P  V+   L    C  G+   A+ I E ++K   +L I   N +I  +C+  +V  A 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 630 LFFHKL 635
             F  L
Sbjct: 513 DLFCSL 518



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 188/365 (51%), Gaps = 8/365 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++ A  +F+EM  +G  AD   Y  ++  +C  GR  +  + L  M+ R    D 
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              + LI  F  +G    +++A EL +EM+++G  P+  T+T LIDG CK+   +KA  +
Sbjct: 318 VAFSALIDCFVKEG---KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L L+ S    PN+ T+  +I+GYCK   ++    L  +M  +G++ +T TY +LI G C
Sbjct: 375 -LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G  E A +L   M      P+I +Y  ++DGLC  G  ++A E+ +K  + +++ D  
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y I++      ++   A  LFC +   G+ PD+  Y  +I   C++  + E++  F++ 
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----SGLCK 554
              G  P   TY  +I  +L +G+ + + K  + + + G + D  T   ++     G  K
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLK 613

Query: 555 QSKLD 559
           +S LD
Sbjct: 614 KSFLD 618



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 4/394 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V+     G++ +   ++  M   G      T   V+ + C+ G    A E+  +M 
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  DA  Y +++   C+ G +  A    + M  +G   D    T LI  FC   + G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC---YAG 296

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                 +LL +M+++   P+V   + LID   K+G   +A  L  ++++     P+  TY
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTY 355

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T++I G+CKE ++++A  +L+ M  +G  PN  T+  LI G+CK    +   +L   M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN +I G C+ G+++ A EL ++   R ++ D ++Y ILL       E ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +F ++ K+ +  DI  Y  +I   C   K+ ++   F      G+ P  +TY  MI 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           G  + G++S A   F++M + G +P+  TY  LI
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 16/380 (4%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             +L ++M  KG   N+YT +++I+  C+      AF    K+++   Y+P+  T++ +I
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLI 149

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C E +++ A  L++RM E G  P   T  +L+ G C  G    A  L+D M + G  
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y  ++  +CK G+   A ELL+K  +R+++ D + Y+I++    K      A  L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M   G   DI  YTTLI  FC   +  +  K  ++ I   + P    ++++I  +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G +  A +  + M Q G +PD +TY +LI G CK+++LD+A    + M+ KG  P   T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 580 RVTLAYEYCKQGDSATAMIILESLD--KKLWIR-------TVNTLIRKLCSEKRVGMAAL 630
              L   YCK      A +I + L+  +K+ +R       T NTLI+  C   ++ +A  
Sbjct: 390 FNILINGYCK------ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 631 FFHKLLGKDQNVDRVSLAAL 650
            F +++ +    D VS   L
Sbjct: 444 LFQEMVSRRVRPDIVSYKIL 463



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 214/456 (46%), Gaps = 6/456 (1%)

Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           AH +  +  M++      +L   FS + ++   G    T T + ++   C  G V  A E
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           + D M   G      +   +V   C  G+V++A   +  M++ G   +  T   ++   C
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G       A ELL +M  +  K +   ++++IDGLCK G  + AF LF ++     +K
Sbjct: 224 KSG---QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFK 279

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            ++  YT +I G+C   + +    LL  M ++ + P+   +++LI    K G    A +L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M + G +P+   Y ++IDG CK+ ++ +A  +L     +    +  T+ IL++ + K
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                  L LF +M   G+  D   Y TLI  FC   K++ +++ FQE ++  + P   +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +G    A++ F+++ +     D   Y  +I G+C  SK+D+A   + S+ 
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            KG+ P   T   +    CK+G  + A ++   +++
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 164/397 (41%), Gaps = 39/397 (9%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF ++ RS   +P +  ++ + S   + ++ +    L ++M+ +G+  N  T + 
Sbjct: 54  DDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--------- 423
           +I   C+      A+  M  + K G  P+   ++ +I+GLC +GRV EA E         
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 424 --------------------------LLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
                                     L+ +  +   Q +++TY  +L    K  +T  A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  +M +  +  D   Y+ +I   C+   +  +   F E    G       YT++I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G      K  + M +    PD + + ALI    K+ KL EA + ++ MI +GISP  
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 578 VTRVTLAYEYCK--QGDSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           VT  +L   +CK  Q D A  M+ ++ S      IRT N LI   C    +      F K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
           +  +    D V+   L     E  K  +  +L Q + 
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 102/245 (41%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K + A  L + M      P    ++ L     +   ++   DL   M  +G   N+Y  +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C+  ++  A+  + K  +   + D +T++ L++    +    +AL L  RMV+ 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  P +     L+   C   K+ ++       +  G  P + TY  ++    + G  + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++  ++M +     D + Y  +I GLCK   LD A   +  M  KG     +   TL   
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 587 YCKQG 591
           +C  G
Sbjct: 292 FCYAG 296



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 32/236 (13%)

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           K++Y   L   +   +   A+ LF  M ++   P +  ++ L +   R K+        +
Sbjct: 37  KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +    G+     T + MI    R   +S A     ++ ++G  PD +T+  LI+GLC + 
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
           ++ EA +  + M+  G  P  +T                                +N L+
Sbjct: 157 RVSEALELVDRMVEMGHKPTLIT--------------------------------LNALV 184

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             LC   +V  A L   +++      + V+   +     +S + AL  +L +++ E
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 231/478 (48%), Gaps = 13/478 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P    T   VV   C  G +  A EV DEM  +G       Y +++ A CR G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R L AM  +G  LD     L++ A C++G    + +A  LL ++   G + ++ ++  ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGCEADIVSYNAVL 223

Query: 304 DGLC-KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            GLC  K W +    L  ++VR D   PN+ T+  +I   C+     R   +L +M E G
Sbjct: 224 KGLCMAKRWGDVE-ELMDEMVRVD-CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+   Y ++I G CK G+ E A ++++ M   G  PN+  YN ++ GLC   R +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL + FQ++   D +T+ IL+    +     + + L  +M+  G  PD+  YTT+I  F
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C++  + E+    +   + G  P   +YT ++ G    G    A +   +M Q GC P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +T+  LI+ LCK+  +++A +  + M+  G SP  ++  T+     K G +  A+ +L  
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 603 L-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           + +K +   T+  +++   L  E RV      F  +  KD  +   S A L NA   S
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI--KDTTIR--SDAVLYNAVISS 575



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 210/479 (43%), Gaps = 39/479 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  +    ++  M   G  L T   N V+   CE G V+ A  +  ++   G  AD  SY
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C   R  + +  +  M+      +  T   LI   C  G     ++  E+L +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL---FERVHEVLAQ 276

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P++  +  +IDG+CK+G  E A  + L  + S   KPNV  Y  ++ G C  E
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEI-LNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 347 KMNRAEMLL-----------------------------------ERMKEQGLLPNTNTYT 371
           +   AE LL                                   E+M   G +P+  TYT
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G CK G  + A  L+  M   GC PN  +Y  ++ GLC  GR  +A EL+ +  Q+
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               + +T+  L++   K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K +E+
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +     +  G+ P    Y+S+ C   R+G ++  ++ F  +       D + Y A+IS 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           LCK+ + D A  F+  M+  G  P E T   L      +G +  A  +L  L  +  +R
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
           V  +A ++  +V   C  GR+ +A   L  M  +G         +++ A C   GFR S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +    +LE M  KG   +     ++++ +C++G  ++A  L  KL      + ++ +Y A
Sbjct: 167 R----VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNA 221

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C  ++    E L++ M      PN  T+ +LI   C+ G FER ++++  M + G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CTP+I  Y  IIDG+CK+G ++ A E+L +     L+ + + Y  +L         K+A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +     D   +  L+  FC+   +    +  ++ ++ G  P   TYT++I G+
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  AV   + M+  GC P+ ++Y  ++ GLC   +  +A +    MI +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT                                 NTLI  LC +  V  A     ++L 
Sbjct: 462 VT--------------------------------FNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 638 KDQNVDRVSLAALKNACYESNK 659
              + D +S + + +   ++ K
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGK 511



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 8/326 (2%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y AM++GYC+  ++  A  L   +    + PN  T+  ++ G C  G    A +++D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +GC P    Y+ I++  C+ G  + +  +L+    +    D     ++L+   +Q 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+GL  ++   G   DI +Y  ++   C  K+  + E+   E +     P   T+ 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 512 SMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++I GYL R+G      +   +M++ GC PD   Y  +I G+CK+  L+ A +    M  
Sbjct: 256 TLI-GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGM 627
            G+ P  V   T+    C       A  +L  +   D  L   T N L+   C    V  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
                 ++L      D ++   + N 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVING 400



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 32/261 (12%)

Query: 407 AIIDGLCKKGRVQE---------------AYELLKKAFQRELQ--------------ADK 437
           A+I  LC  GR  E               AY  +   + R  Q               + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T+  ++     +     AL +   M   G  P    Y  ++ A CR    + S +  + 
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G          ++      G +  AV   +++   GC  D ++Y A++ GLC   +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
             +  +  + M+    +P  VT  TL    C+ G       +L  + +      IR   T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 615 LIRKLCSEKRVGMAALFFHKL 635
           +I  +C E  + +A    +++
Sbjct: 292 IIDGICKEGHLEVANEILNRM 312


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 231/478 (48%), Gaps = 13/478 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P    T   VV   C  G +  A EV DEM  +G       Y +++ A CR G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R L AM  +G  LD     L++ A C++G    + +A  LL ++   G + ++ ++  ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGCEADIVSYNAVL 223

Query: 304 DGLC-KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            GLC  K W +    L  ++VR D   PN+ T+  +I   C+     R   +L +M E G
Sbjct: 224 KGLCMAKRWGDVE-ELMDEMVRVD-CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+   Y ++I G CK G+ E A ++++ M   G  PN+  YN ++ GLC   R +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL + FQ++   D +T+ IL+    +     + + L  +M+  G  PD+  YTT+I  F
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C++  + E+    +   + G  P   +YT ++ G    G    A +   +M Q GC P+ 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +T+  LI+ LCK+  +++A +  + M+  G SP  ++  T+     K G +  A+ +L  
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 603 L-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           + +K +   T+  +++   L  E RV      F  +  KD  +   S A L NA   S
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI--KDTTIR--SDAVLYNAVISS 575



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 210/479 (43%), Gaps = 39/479 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  +    ++  M   G  L T   N V+   CE G V+ A  +  ++   G  AD  SY
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C   R  + +  +  M+      +  T   LI   C  G     ++  E+L +
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL---FERVHEVLAQ 276

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P++  +  +IDG+CK+G  E A  + L  + S   KPNV  Y  ++ G C  E
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEI-LNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 347 KMNRAEMLL-----------------------------------ERMKEQGLLPNTNTYT 371
           +   AE LL                                   E+M   G +P+  TYT
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G CK G  + A  L+  M   GC PN  +Y  ++ GLC  GR  +A EL+ +  Q+
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               + +T+  L++   K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K +E+
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +     +  G+ P    Y+S+ C   R+G ++  ++ F  +       D + Y A+IS 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           LCK+ + D A  F+  M+  G  P E T   L      +G +  A  +L  L  +  +R
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
           V  +A ++  +V   C  GR+ +A   L  M  +G         +++ A C   GFR S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +    +LE M  KG   +     ++++ +C++G  ++A  L  KL      + ++ +Y A
Sbjct: 167 R----VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNA 221

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C  ++    E L++ M      PN  T+ +LI   C+ G FER ++++  M + G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CTP+I  Y  IIDG+CK+G ++ A E+L +     L+ + + Y  +L         K+A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M +     D   +  L+  FC+   +    +  ++ ++ G  P   TYT++I G+
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  AV   + M+  GC P+ ++Y  ++ GLC   +  +A +    MI +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           VT                                 NTLI  LC +  V  A     ++L 
Sbjct: 462 VT--------------------------------FNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 638 KDQNVDRVSLAALKNACYESNK 659
              + D +S + + +   ++ K
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGK 511



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 8/326 (2%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y AM++GYC+  ++  A  L   +    + PN  T+  ++ G C  G    A +++D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +GC P    Y+ I++  C+ G  + +  +L+    +    D     ++L+   +Q 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+GL  ++   G   DI +Y  ++   C  K+  + E+   E +     P   T+ 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 512 SMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++I GYL R+G      +   +M++ GC PD   Y  +I G+CK+  L+ A +    M  
Sbjct: 256 TLI-GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGM 627
            G+ P  V   T+    C       A  +L  +   D  L   T N L+   C    V  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
                 ++L      D ++   + N 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVING 400



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 32/261 (12%)

Query: 407 AIIDGLCKKGRVQE---------------AYELLKKAFQRELQ--------------ADK 437
           A+I  LC  GR  E               AY  +   + R  Q               + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T+  ++     +     AL +   M   G  P    Y  ++ A CR    + S +  + 
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G          ++      G +  AV   +++   GC  D ++Y A++ GLC   +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
             +  +  + M+    +P  VT  TL    C+ G       +L  + +      IR   T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 615 LIRKLCSEKRVGMAALFFHKL 635
           +I  +C E  + +A    +++
Sbjct: 292 IIDGICKEGHLEVANEILNRM 312


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 210/431 (48%), Gaps = 5/431 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG +E     +   +  F   G++ +      ++   G  L   +   ++   C++G
Sbjct: 254 ILKNG-YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
             + A E+      + V  D   Y  ++   C+   V +A    S  + +    D  T  
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI+ FC     G +K A +L  +M  K   P+VYT ++L+DG CK G  ++A +  L +
Sbjct: 373 ALISGFC---IVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEA-KNVLAM 428

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +   + KP+V TY++++ GYC   ++N+AE +   M  +G+  N  +Y  +I G CK+  
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L   M  +   P++  Y+++IDGLCK GR+  A EL+ +   R  Q D ITY  
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +L    K+    +A+ L  ++   G+ PD++ YT L+   C+  K++++ K F++ +  G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
                  YT MI G+   G    A+    +M + GC PD  TY  +I  L ++ + D A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 563 QFYESMIGKGI 573
           +    MI +G+
Sbjct: 669 KLLREMIMRGL 679



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 183/357 (51%), Gaps = 8/357 (2%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           +L  G   D  TLT  I  FC    +G I QA    ++++  G+  +  ++  LI+GLCK
Sbjct: 254 ILKNGYEPDTITLTTFIKGFC---LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCK 310

Query: 309 KGWTEKAFRLFLKLVRSDN--YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            G T+ A  L   L R+D    +P+V  Y  +I G CK++ +N A  L      + + P+
Sbjct: 311 VGETKAALEL---LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD 367

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY +LI G C VG  + A DL + M  +   P++Y ++ ++DG CK G ++EA  +L 
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA 427

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              ++ ++ D +TY+ L+  +    E  +A  +F  M   G+  ++ +Y  +I  FC+ K
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            + E+ K F+E     +FP   TY+S+I G  + G IS A++    M+  G  PD ITY 
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +++  LCK+  +D+A      + G+GI P   T   L    C+ G    A  + E L
Sbjct: 548 SILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 210/456 (46%), Gaps = 29/456 (6%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +   +GR  E  +++  M  +G          V+   C+ G V  A  + +EM   G  A
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKG---- 272
           D +++  +V   C +GRV EA R +  M+ +G +    T   L+   C     D+     
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 273 -------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                                G + +A EL E M  KG +P+ +T+++L+ GLCK G   
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIS 363

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A RL L+ +    + PNV TYT ++  +CK    +    LLE M  +GL  N+  Y  +
Sbjct: 364 SAVRL-LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           IY  CK G  + A  L+  M  +GC P+I +YN II  LC   +++EA  + +   +  +
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
            A+ ITY  ++   L+    + A+ L   M+  G + D+ +Y  LI A C+   +  S  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    G+ P   +Y  +I    ++  +  A++  ++M   G APD +TY  LI+GLC
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           K   +  A    E +  + + P  +T   L   +CK
Sbjct: 603 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 11/466 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P  T T        C LG    A  +   M   G   DA  Y+ ++ A C  G VTEA 
Sbjct: 171 VPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ ML  G   D  T   ++   C  G    +++A  L++ M+ KG  P V T+  L+
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLG---RVREAARLVDRMMTKGCMPGVMTYGFLL 287

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC+    ++A  +  ++      + NV  +  +I G   E K+  A  L E M  +G 
Sbjct: 288 QGLCRVRQADEARAMLGRVP-----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+ +TY+ L++G CK+G    A  L+  M K+G  PN+  Y  ++   CK G   +   
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL++   + L  +   Y  ++    K     +A+GL   M   G NPDI +Y T+I   C
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
             ++M+E+E  F+  +  G+     TY ++I   LRDG    AV+  + M   GC+ D +
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILES 602
           +Y  LI  +CK   +D +    E M  KGI P  V+   L  E CK+     A+ +  + 
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           L++ L   I T NTLI  LC    +  A     KL  ++ + D ++
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 8/362 (2%)

Query: 279 QAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A  LL+++ R+ G +P+  ++ V++  L +      A  L+ ++V  D   P   T+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
                C+  + N A  LL  M   G +P+   Y ++I+  C  G    A  L++ M   G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  ++  ++ ++ G+C  GRV+EA  L+ +   +      +TY  LL    +  +  +A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +  R+ +     ++  + T+I     + K+ E+ + ++     G  P   TY+ ++ G 
Sbjct: 301 AMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G ISSAV+  + M + G AP+ +TY  ++   CK    D+     E M  KG++   
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
                + Y  CK G    AM +++ +  +     I + NT+I  LC+ +++  A   F  
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 635 LL 636
           LL
Sbjct: 477 LL 478


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 198/398 (49%), Gaps = 9/398 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T   ++   CEL     A ++F +M    V  DA  Y +++   C++ 
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG-SIKQAFELLEEMVRKGWKPNV 296
           ++  A  +   M+  G + D  T T+L+ +     F+    +Q  ++ EEM+ KG  P +
Sbjct: 64  KLDLAASYFEQMVQSGCLPDKVTYTVLVHSL----FKACKWEQGHQIFEEMLSKGHSPEL 119

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T+  +++G CK G  ++A  L  +L +     P+   Y+ +I G CK ++   A  L E
Sbjct: 120 VTYATVVNGYCKAGRIDQALSLMRRL-KGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE 178

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
                G + +   YTS I G CK G  + A  +   M + GC P+  +YN II  LCK  
Sbjct: 179 --MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 236

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN-PDIHAY 475
           RV EA EL+ +A +R+        T+L+    K    ++A  +  RM++AG   P +  Y
Sbjct: 237 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTY 296

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           + +I   C+  ++ ++    Q+   AG  P   TYT++I  + + G +  A + FQRM++
Sbjct: 297 SAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            GCA D + Y  LI G C+ +K+DEA    E M G+GI
Sbjct: 357 RGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y V   SL     +E+ H++ + M               V+ + + GR+ +  S++  + 
Sbjct: 87  YTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLK 146

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G     S  + ++   C+    E A E+F EM A G   D   Y   +   C+ G++ 
Sbjct: 147 GTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAA-GDVQDVIVYTSFISGLCKAGKLD 204

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA      M++ G   D  +  ++I + C       + +A EL+++ + +   P V   T
Sbjct: 205 EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN---RVSEAKELMDQAMERKCMPGVPVCT 261

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           VL+DGLCK    E+A  +  +++ + +  P+V TY+A+I G CK ++++ A ++L++M+ 
Sbjct: 262 VLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRR 321

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G +P+  TYT++I   CKVG  + A +L   M + GC  ++ AYN +I G C+  +V E
Sbjct: 322 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDE 381

Query: 421 AYELLKKAFQR 431
           A  ++++   R
Sbjct: 382 AIAMIEEMAGR 392



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 6/358 (1%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L  +++    P + T+ ++I   C+    N+A  +  +M +  + P+   YT +I   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+   + A    + M + GC P+   Y  ++  L K  + ++ +++ ++   +    + +
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +++ + K     QAL L  R+   G +P    Y+TLI   C+  + +E+ + F+ A
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
             AG       YTS I G  + G +  A     +M + GCAPD ++Y  +I  LCK +++
Sbjct: 181 --AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL----DKKLWIRTVNT 614
            EA +  +  + +   P       L    CK      A +ILE +    D+   + T + 
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           +I  LC   R+  A +   K+       D V+  A+ +A  +  +     +L QR+ E
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 7/311 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V S  +  + ++G  +  EM + G      T   VV   C+ G ++ A  +   +   G
Sbjct: 90  LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 149

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                S Y  ++   C+  R  EA       +  G + D    T  I+  C  G    + 
Sbjct: 150 RSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAG---KLD 204

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  +M+  G  P+  ++ V+I  LCK     +A  L  + +      P V   T +
Sbjct: 205 EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER-KCMPGVPVCTVL 263

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           + G CK  ++  A ++LERM E G   P+  TY+++I G CK    + AY ++  M + G
Sbjct: 264 VDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAG 323

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P++  Y AIID  CK GR+ EA EL ++  +R   +D + Y IL+  + + A+  +A+
Sbjct: 324 CVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAI 383

Query: 458 GLFCRMVKAGL 468
            +   M   G+
Sbjct: 384 AMIEEMAGRGI 394


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 205/391 (52%), Gaps = 7/391 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    VV   C+ G V +A ++ DEM   GV  +A  Y  ++ AY R         
Sbjct: 67  PLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 123

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  M + G      T T+L+           I +   + EEM  K    +VY ++ +I+
Sbjct: 124 MLKVMENEGIEPTVGTYTILVDGLSAAR---DITKVEAVFEEMKSKNLSGDVYFYSSVIN 180

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             C+ G   +A  +F + V  +  +PN HTY A+I+G+CK  +M  AEML+  M+ +G+ 
Sbjct: 181 AYCRAGNVRRASEVFDECV-GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 239

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            N   + ++I G+C+    ++A ++  +M K G   ++Y YN +  GL +  R+ EA  L
Sbjct: 240 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 299

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L+   ++ ++ + ++YT L+S H  + +  +A  LF  M   G  P +  Y  ++  + +
Sbjct: 300 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 359

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  ++E+E+F  E    GL P   +Y +++ G+  +G +  A++ F+ M Q G  P+ + 
Sbjct: 360 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 419

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ALISGL K+ + +EA Q Y++M+G G++P
Sbjct: 420 YTALISGLAKEGRSEEAFQLYDNMLGDGLTP 450



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           ++++  +C  G    +  A +LL+EM R G K N   +  L+D   ++   ++   + LK
Sbjct: 71  SVVVDGYCKSG---RVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM-LK 126

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++ ++  +P V TYT ++ G      + + E + E MK + L  +   Y+S+I  +C+ G
Sbjct: 127 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 186

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N  RA ++ D     G  PN + Y A+I+G CK G+++ A  L+     R +  ++I + 
Sbjct: 187 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 246

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++  + ++    +AL +   M K G+  D++ Y TL     R  +M E++   +  I  
Sbjct: 247 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 306

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   +YT++I  +  +G++  A + F+ M   G  P  +TY  ++ G  K+  + EA
Sbjct: 307 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 366

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRK 618
            +F   M  KG+ P   +   L + +C  G    A+ + E + +   K  +     LI  
Sbjct: 367 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 426

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L  E R   A   +  +LG     D    +AL  + +   K
Sbjct: 427 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 467



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 181/386 (46%), Gaps = 22/386 (5%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLIT 188
           RH +++  +C  SL+     E+  +             R+ E   M+  M N G+ P + 
Sbjct: 95  RHGVKVNALCYNSLLDAYTREKDDD-------------RVAE---MLKVMENEGIEPTVG 138

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +    V G++    + +  E VF+EM ++ +  D   Y  ++ AYCR G V  A      
Sbjct: 139 TYTILVDGLSAARDITK-VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 197

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            +  G   +  T   LI  FC     G ++ A  L+ +M  +G   N      +IDG C+
Sbjct: 198 CVGNGIEPNEHTYGALINGFCKI---GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           K   +KA  + + ++     + +V+TY  +  G  +  +M+ A+ LL  M E+G+ PN  
Sbjct: 255 KNMVDKALEIKM-IMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 313

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +YT+LI  HC  G+   A  L   M   G  P++  YN ++DG  KKG ++EA     + 
Sbjct: 314 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEM 373

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ L  D  +Y  L+  H    +   AL LF  M + G  P++ AYT LI+   ++ + 
Sbjct: 374 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 433

Query: 489 KESEKFFQEAITAGLFPTKETYTSMI 514
           +E+ + +   +  GL P    Y++++
Sbjct: 434 EEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 4/294 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C  G V  A EVFDE    G+  +  +Y  ++  +C++G++  A+  ++ M  RG
Sbjct: 178 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             ++      +I  +C K     + +A E+   M + G + +VYT+  L  GL +    +
Sbjct: 238 VGINQIVFNTMIDGYCRKNM---VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 294

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L L+++     +PN  +YT +IS +C E  M  A  L   M   G  P+  TY  +
Sbjct: 295 EAKNL-LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 353

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G+ K G+   A    + M K+G  P+IY+Y A++ G C  G+V  A  L ++  QR  
Sbjct: 354 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 413

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           + + + YT L+S   K+  +++A  L+  M+  GL PD   Y+ L+ +    KK
Sbjct: 414 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 467



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 3/154 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++S     G + E   +  EM  NG      T N ++    + G +  AE   +
Sbjct: 312 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 371

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  +G+  D  SY  +V  +C  G+V  A R    M  RG+  +    T LI+    + 
Sbjct: 372 EMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE- 430

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             G  ++AF+L + M+  G  P+   ++ L+  L
Sbjct: 431 --GRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 194/417 (46%), Gaps = 55/417 (13%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L++ AE+ + EM A GV  +  +        C  G+  +A   +  M+ +G I D +T +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++   C+      ++ AF L EEM R G   +VYT+T+++D  CK G  E+A + F ++
Sbjct: 488 KVLNYLCNAS---KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            R     PNV TYTA+I  Y K +K++ A  L E M  +G LPN  TY++LI GHCK G 
Sbjct: 545 -REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 383 FERA----------------------YD-----------------------------LMD 391
            E+A                      YD                             L+D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC PN   Y+A+IDGLCK G++ EA E+  +  +    A   TY+ L+  + K  
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A  +  +M++    P++  YT +I   C+  K  E+ K  Q     G  P   TYT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +MI G+   G I + ++  +RM   G AP+ +TY  LI   CK   LD A    E M
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 243/532 (45%), Gaps = 45/532 (8%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VSSF       G+ ++ FS++ EM   G    TST ++V+   C    +E A  +F+EM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+ AD  +Y +MV ++C+ G + +A +W + M + G   +  T T LI A+       
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK--- 567

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY- 328
            +  A EL E M+ +G  PN+ T++ LIDG CK G  EKA ++F ++  S      D Y 
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                   +PNV TY A++ G+CK  ++  A  LL+ M  +G  PN   Y +LI G CKV
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M + G    +Y Y+++ID   K  R   A ++L K  +     + + Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K  +T +A  L   M + G  P++  YT +I  F    K++   +  +   +
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----- 555
            G+ P   TY  +I    ++G +  A    + M Q         Y  +I G  K+     
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867

Query: 556 SKLDEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
             LDE  Q         Y  +I   I   +  R+ +A    ++  + +A ++  S     
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLI---KAQRLEMALRLLEEVATFSATLVDYS----- 919

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T N+LI  LC   +V  A   F ++  K    +  S  +L    + ++K
Sbjct: 920 --STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 55/500 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++C   S  ++G+ +E  ++V   T N +P  T    +++   CE  L E A +  + M 
Sbjct: 273 LRCFAYSLCKVGKWREALTLV--ETENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A     +  +Y  ++       ++    R L+ M+  G          L+ A+C  G   
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A++LL++MV+ G  P    + +LI  +C                  D    N    
Sbjct: 390 ---YAYKLLKKMVKCGHMPGYVVYNILIGSIC-----------------GDKDSLNC--- 426

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
                     + ++ AE     M   G++ N    +S     C  G +E+A+ ++  M  
Sbjct: 427 ----------DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+ +++ LC   +++ A+ L ++  +  L AD  TYTI++    K    +Q
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A   F  M + G  P++  YT LI A+ + KK+  + + F+  ++ G  P   TY+++I 
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 516 GYLRDGNISSAVKYFQRM----------------NQIGCAPDNITYGALISGLCKQSKLD 559
           G+ + G +  A + F+RM                +     P+ +TYGAL+ G CK  +++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLI 616
           EA +  ++M  +G  P ++    L    CK G    A  +   + +  +   + T ++LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 617 RKLCSEKRVGMAALFFHKLL 636
            +    KR  +A+    K+L
Sbjct: 717 DRYFKVKRQDLASKVLSKML 736



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 9/349 (2%)

Query: 146 NGNFERAHEVMQ-CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           + N ER + V    ++  F +  R++E   ++  M+  G        + ++   C++G +
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A+EV  EM   G  A   +Y  ++  Y ++ R   A + LS ML+     +    T +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I   C     G   +A++L++ M  KG +PNV T+T +IDG    G  E    L L+ + 
Sbjct: 751 IDGLCKV---GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-LERMG 806

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S    PN  TY  +I   CK   ++ A  LLE MK+     +T  Y  +I G  K   F 
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--FQRELQADKITYTI 442
            +  L+D +G++   P +  Y  +ID L K  R++ A  LL++   F   L     TY  
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           L+       + + A  LF  M K G+ P++ ++ +LI    R  K+ E+
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 37/314 (11%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++    ++G+L E   +  EM+ +G P    T + ++    ++   + A +V  +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+   C++G+  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GMI 792

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--------------- 319
           G I+   ELLE M  KG  PN  T+ VLID  CK G  + A  L                
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852

Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK--E 360
                            L  +  D+  P +  Y  +I    K +++  A  LLE +    
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L+  ++TY SLI   C     E A+ L   M K+G  P + ++ ++I GL +  ++ E
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972

Query: 421 AYELLKKAFQRELQ 434
           A  LL      E+Q
Sbjct: 973 ALLLLDFISHMEIQ 986



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 23/359 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K     +  L+D L  +   EK    FL+ +R D+ +        ++  +C+    + 
Sbjct: 160 GYKHTAPVYNALVD-LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDL--MGKEGCTPNIYAY 405
           A   L R+K+    P+ +TY  LI    K    + A   +  M L  +  +G T   +AY
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +     LCK G+ +EA  L++         D + YT L+S   + +  ++A+    RM  
Sbjct: 279 S-----LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
               P++  Y+TL+     +K++   ++     +  G +P+ + + S++  Y   G+ S 
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVT 579
           A K  ++M + G  P  + Y  LI  +C          LD A + Y  M+  G+   ++ 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             +     C  G    A  ++  +  + +I   +T   ++  LC+  ++ +A L F ++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + E  ++L  M+ +G I D    T LI  FC     G  ++A  ++E +   G  P
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRS---GKTRKATRIMEILENSGAVP 175

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+ VLI G CK G  +KA ++  ++    +  P+V TY  ++   C   K+  A  +
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVLERM----SVAPDVVTYNTILRSLCDSGKLKEAMEV 231

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+R  ++   P+  TYT LI   C      +A  L+D M K+GC P++  YN +I+G+CK
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +GR+ EA + L        Q + IT+ I+L           A  L   M++ G +P +  
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   CR++ +  +    ++    G  P   +Y  ++ G+ ++  +  A++Y + M 
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K D A +    +  KG SP  +T  T+     K G + 
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471

Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            A  +LE + +K     I T +TL+R L  E +V  A   FH + G
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 215/432 (49%), Gaps = 9/432 (2%)

Query: 154 EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +V+ C  ++  F   G+ ++   ++  + N+G      T N ++G  C+ G ++ A +V 
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M    V  D  +Y  ++ + C  G++ EA   L   + R    D  T T+LI A C+ 
Sbjct: 201 ERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                + QA +LL+EM +KG KP+V T+ VLI+G+CK+G  ++A + FL  +     +PN
Sbjct: 258 S---GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIK-FLNNMPLYGCQPN 313

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T+  ++   C   +   AE LL  M  +G  P+  T+  LI   C+     RA D+++
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K GC PN  +YN ++ G C++ ++  A E L+    R    D +TY  LL+   K  
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A+ +  ++   G +P +  Y T+I    +  K + + +  +E    GL P   TY+
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G   +G +  A+K F  M  +   P  +TY A++ GLCK  +   A  F   M+ K
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553

Query: 572 GISPCEVTRVTL 583
           G  P + T   L
Sbjct: 554 GCKPTKATYTIL 565



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 218/440 (49%), Gaps = 10/440 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +E   +  + M  +G   D  +   ++  +CR G+  +A R +  + + GA+ D  T 
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI  +C  G    I +A ++LE M      P+V T+  ++  LC  G  ++A  +  +
Sbjct: 181 NVLIGGYCKSG---EIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            ++ + Y P+V TYT +I   C +  + +A  LL+ M+++G  P+  TY  LI G CK G
Sbjct: 235 QMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A   ++ M   GC PN+  +N I+  +C  GR  +A  LL    ++      +T+ 
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL++   ++    +A+ +  +M K G  P+  +Y  L+  FC++KKM  + ++ +  ++ 
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +P   TY +++    +DG   +AV+   +++  GC+P  ITY  +I GL K  K + A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRK 618
            +  E M  KG+ P  +T  TL      +G    A+ I   +E L  K    T N ++  
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533

Query: 619 LCSEKRVGMAALFFHKLLGK 638
           LC  ++   A  F   ++ K
Sbjct: 534 LCKAQQTSRAIDFLAYMVEK 553



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 6/197 (3%)

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           I L + ++  E ++ L    RM+  G  PD+ A T+LI  FCR  K +++ +  +    +
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P   TY  +I GY + G I  A++  +RM+    APD +TY  ++  LC   KL EA
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEA 228

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
            +  +  + +   P  +T   L    C       AM +L+ + KK     + T N LI  
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288

Query: 619 LCSEKRVGMAALFFHKL 635
           +C E R+  A  F + +
Sbjct: 289 ICKEGRLDEAIKFLNNM 305



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 44/287 (15%)

Query: 393 MGKEGCTPN---------IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           +G E  +PN          +A N  +  L + G ++E  + L++   +    D I  T L
Sbjct: 89  IGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 148

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------------- 484
           +    +  +T++A  +   +  +G  PD+  Y  LI  +C+                   
Sbjct: 149 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPD 208

Query: 485 -------------QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
                          K+KE+ +     +    +P   TYT +I     D  +  A+K   
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M + GC PD +TY  LI+G+CK+ +LDEA +F  +M   G  P  +T   +    C  G
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328

Query: 592 DSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               A  +L  + +K     + T N LI  LC ++ +G A     K+
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 13/180 (7%)

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R  +++E  KF +  I  G  P     TS+I G+ R G    A +  + +   G  PD I
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI G CK  ++D+A Q  E M    ++P  VT  T+    C  G    AM   E L
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAM---EVL 232

Query: 604 DKKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE 656
           D+++       + T   LI   C++  VG A     ++  K    D V+   L N  C E
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 77/280 (27%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           KF + M LY  C  ++I+       H ++   + S    GR  +   ++ +M   G    
Sbjct: 300 KFLNNMPLY-GCQPNVIT-------HNII---LRSMCSTGRWMDAERLLADMLRKGCSPS 348

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C   L+  A +V ++M   G   ++ SY  ++  +C+  ++  A  +L 
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFR--------------------------------G 275
            M+ RG   D  T   L+TA C  G                                  G
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 468

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF---------------- 319
             + A ELLEEM RKG KP++ T++ L+ GL  +G  ++A ++F                
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYN 528

Query: 320 ---LKLVRSDNY---------------KPNVHTYTAMISG 341
              L L ++                  KP   TYT +I G
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +R+G +   +K+ +RM   G  PD I   +LI G C+  K  +A +  E +   G  P  
Sbjct: 118 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDV 177

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           +T   L   YCK G+   A+ +LE +     + T NT++R LC   ++  A     + + 
Sbjct: 178 ITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQ 237

Query: 638 KDQNVDRVSLAALKNA-CYES 657
           ++   D ++   L  A C +S
Sbjct: 238 RECYPDVITYTILIEATCNDS 258


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 11/466 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P  T T        C LG  + A  +   M   G   DA  Y+ ++ A C  G VTEA 
Sbjct: 171 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ ML  G   D  T   ++   C  G    +++A  L++ M+ KG  P V T+  L+
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLG---RVREAARLVDRMMTKGCMPGVMTYGFLL 287

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC+    ++A  +  ++        NV  +  +I G   E K+  A  L E M  +G 
Sbjct: 288 QGLCRVRQADEARAMLGRVPEL-----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+ +TY+ L++G CK+G    A  L+  M K+G  PN+  Y  ++   CK G   +   
Sbjct: 343 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL++   + L  +   Y  ++    K     +A+GL   M   G NPDI +Y T+I   C
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
             ++M+E+E  F+  +  G+     TY ++I   LRDG    AV+  + M   GC+ D +
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILES 602
           +Y  LI  +CK   +D +    E M  KGI P  V+   L  E CK+     A+ +  + 
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           L++ L   I T NTLI  LC    +  A     KL  ++ + D ++
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 210/456 (46%), Gaps = 29/456 (6%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +   +GR  E  +++  M  +G          V+   C+ G V  A  + +EM   G  A
Sbjct: 184 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKG---- 272
           D +++  +V   C +GRV EA R +  M+ +G +    T   L+   C     D+     
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 273 -------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                                G + +A EL E M  KG +P+ +T+++L+ GLCK G   
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 363

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A RL L+ +    + PNV TYT ++  +CK    +    LLE M  +GL  N+  Y  +
Sbjct: 364 SAVRL-LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           IY  CK G  + A  L+  M  +GC P+I +YN II  LC   +++EA  + +   +  +
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
            A+ ITY  ++   L+    + A+ L   M+  G + D+ +Y  LI A C+   +  S  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    G+ P   +Y  +I    ++  +  A++  ++M   G APD +TY  LI+GLC
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           K   +  A    E +  + + P  +T   L   +CK
Sbjct: 603 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 178/373 (47%), Gaps = 39/373 (10%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+G     G +  A E+++ M  +G   DA +Y +++   C++GR+  A R L  M  
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +G   +  T T+++ +FC  G     +    LLEEM  KG   N   +  +I  LCK G 
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRA---LLEEMSAKGLTLNSQGYNGMIYALCKDGR 431

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A  L  ++ RS    P++ +Y  +I   C  E+M  AE + E + E+G++ N  TY 
Sbjct: 432 MDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I+   + G ++ A  L   M   GC+ ++ +YN +I  +CK G V  +  LL++  ++
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++ + ++Y IL+SE  K+   + AL L  +M+  GL PDI  Y TLI   C+       
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM------ 604

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                                        G + +A+   ++++     PD ITY  LIS 
Sbjct: 605 -----------------------------GWMHAALNLLEKLHNENVHPDIITYNILISW 635

Query: 552 LCKQSKLDEACQF 564
            CK   LD+A   
Sbjct: 636 HCKVRLLDDAAML 648



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 167/362 (46%), Gaps = 8/362 (2%)

Query: 279 QAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A  LL+++ R+ G +P+  ++ V++  L +      A  L+ ++V  D   P   T+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
                C+  + + A  LL  M   G +P+   Y ++I+  C  G    A  L++ M   G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  ++  ++ ++ G+C  GRV+EA  L+ +   +      +TY  LL    +  +  +A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +  R+ +     ++  + T+I     + K+ E+ + ++     G  P   TY+ ++ G 
Sbjct: 301 AMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I SAV+  + M + G AP+ +TY  ++   CK    D+     E M  KG++   
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
                + Y  CK G    AM +++ +  +     I + NT+I  LC+ +++  A   F  
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 635 LL 636
           LL
Sbjct: 477 LL 478


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 194/417 (46%), Gaps = 55/417 (13%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L++ AE+ + EM A GV  +  +        C  G+  +A   +  M+ +G I D +T +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++   C+      ++ AF L EEM R G   +VYT+T+++D  CK G  E+A + F ++
Sbjct: 488 KVLNYLCNAS---KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            R     PNV TYTA+I  Y K +K++ A  L E M  +G LPN  TY++LI GHCK G 
Sbjct: 545 -REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 383 FERA----------------------YD-----------------------------LMD 391
            E+A                      YD                             L+D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  EGC PN   Y+A+IDGLCK G++ EA E+  +  +    A   TY+ L+  + K  
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A  +  +M++    P++  YT +I   C+  K  E+ K  Q     G  P   TYT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +MI G+   G I + ++  +RM   G AP+ +TY  LI   CK   LD A    E M
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 243/532 (45%), Gaps = 45/532 (8%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VSSF       G+ ++ FS++ EM   G    TST ++V+   C    +E A  +F+EM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+ AD  +Y +MV ++C+ G + +A +W + M + G   +  T T LI A+       
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK--- 567

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY- 328
            +  A EL E M+ +G  PN+ T++ LIDG CK G  EKA ++F ++  S      D Y 
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                   +PNV TY A++ G+CK  ++  A  LL+ M  +G  PN   Y +LI G CKV
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M + G    +Y Y+++ID   K  R   A ++L K  +     + + Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K  +T +A  L   M + G  P++  YT +I  F    K++   +  +   +
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----- 555
            G+ P   TY  +I    ++G +  A    + M Q         Y  +I G  K+     
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867

Query: 556 SKLDEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
             LDE  Q         Y  +I   I   +  R+ +A    ++  + +A ++  S     
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLI---KAQRLEMALRLLEEVATFSATLVDYS----- 919

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T N+LI  LC   +V  A   F ++  K    +  S  +L    + ++K
Sbjct: 920 --STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 55/500 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++C   S  ++G+ +E  ++V   T N +P  T    +++   CE  L E A +  + M 
Sbjct: 273 LRCFAYSLCKVGKWREALTLV--ETENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A     +  +Y  ++       ++    R L+ M+  G          L+ A+C  G   
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A++LL++MV+ G  P    + +LI  +C                  D    N    
Sbjct: 390 ---YAYKLLKKMVKCGHMPGYVVYNILIGSIC-----------------GDKDSLNC--- 426

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
                     + ++ AE     M   G++ N    +S     C  G +E+A+ ++  M  
Sbjct: 427 ----------DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+ +++ LC   +++ A+ L ++  +  L AD  TYTI++    K    +Q
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A   F  M + G  P++  YT LI A+ + KK+  + + F+  ++ G  P   TY+++I 
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 516 GYLRDGNISSAVKYFQRM----------------NQIGCAPDNITYGALISGLCKQSKLD 559
           G+ + G +  A + F+RM                +     P+ +TYGAL+ G CK  +++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLI 616
           EA +  ++M  +G  P ++    L    CK G    A  +   + +  +   + T ++LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 617 RKLCSEKRVGMAALFFHKLL 636
            +    KR  +A+    K+L
Sbjct: 717 DRYFKVKRQDLASKVLSKML 736



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 9/349 (2%)

Query: 146 NGNFERAHEVMQ-CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           + N ER + V    ++  F +  R++E   ++  M+  G        + ++   C++G +
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A+EV  EM   G  A   +Y  ++  Y ++ R   A + LS ML+     +    T +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I   C     G   +A++L++ M  KG +PNV T+T +IDG    G  E    L L+ + 
Sbjct: 751 IDGLCKV---GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-LERMG 806

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S    PN  TY  +I   CK   ++ A  LLE MK+     +T  Y  +I G  K   F 
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--FQRELQADKITYTI 442
            +  L+D +G++   P +  Y  +ID L K  R++ A  LL++   F   L     TY  
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           L+       + + A  LF  M K G+ P++ ++ +LI    R  K+ E+
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++    ++G+L E   +  EM+ +G P    T + ++    ++   + A +V  +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+   C++G+  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GMI 792

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--------------- 319
           G I+   ELLE M  KG  PN  T+ VLID  CK G  + A  L                
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852

Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK--E 360
                            L  +  D+  P +  Y  +I    K +++  A  LLE +    
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L+  ++TY SLI   C     E A+ L   M K+G  P + ++ ++I GL +  ++ E
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972

Query: 421 AYELL 425
           A  LL
Sbjct: 973 ALLLL 977



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 23/359 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K     +  L+D L  +   EK    FL+ +R D+ +        ++  +C+    + 
Sbjct: 160 GYKHTAPVYNALVD-LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDL--MGKEGCTPNIYAY 405
           A   L R+K+    P+ +TY  LI    K    + A   +  M L  +  +G T   +AY
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +     LCK G+ +EA  L++         D + YT L+S   + +  ++A+    RM  
Sbjct: 279 S-----LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
               P++  Y+TL+     +K++   ++     +  G +P+ + + S++  Y   G+ S 
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVT 579
           A K  ++M + G  P  + Y  LI  +C          LD A + Y  M+  G+   ++ 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             +     C  G    A  ++  +  + +I   +T   ++  LC+  ++ +A L F ++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 6/241 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    ++G+  E + ++  M   G      T   ++     +G +E   E+ + M ++G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y++++   C+ G +  A   L  M         A    +I     +GF     
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFI 864

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SDNYKPNVHTYTA 337
           ++  LL+E+ +    P +  + +LID L K    E A RL  ++   S        TY +
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C   K+  A  L   M ++G++P   ++ SLI G  +      A  L+D +    
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 984

Query: 398 C 398
           C
Sbjct: 985 C 985


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 223/437 (51%), Gaps = 9/437 (2%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E +      +++ F++ G+++E      +M  +G P+   + N ++   C+ GL + A
Sbjct: 304 NIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEA 363

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             V DEM   G+    S+Y + + A C  GR+ +A   LS+M    A  D  +   L+  
Sbjct: 364 WGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHG 419

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +     R  ++ +  L +++      P++ T+  LIDGLC+ G  E A RL  ++     
Sbjct: 420 YIK--MRKFVEASL-LFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLI 476

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y P+V TYT ++ G+ K   ++ A  + + M  +G+ P+   YT+   G  ++G+ E+A+
Sbjct: 477 Y-PDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAF 535

Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            L + ++ ++   P++  YN  IDGLCK G +++A E  +K F+  L  D +TYT ++  
Sbjct: 536 RLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRG 595

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +L++   K A  L+  M+   L+P +  Y  LI    +  +++++ ++  E    G+ P 
Sbjct: 596 YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPN 655

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +++ G  + GNI  A +Y  +M + G +P+  +Y  LIS  C   K +E  + Y+
Sbjct: 656 VMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYK 715

Query: 567 SMIGKGISPCEVTRVTL 583
            M+ K I P   T   L
Sbjct: 716 EMLDKEIEPDGYTHRAL 732



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 44/394 (11%)

Query: 284 LEEMVRKGW-----------------------------------KPNVYTHTVLIDGLCK 308
            E+M+RKG+                                    P V T   ++D   K
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  E+  +++L++ R  N + +  TY  +I+G+ K  KM  A      M+  G      
Sbjct: 287 AGDLERVDKIWLEMKRR-NIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPY 345

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           ++  LI G+CK G F+ A+ + D M   G  P    YN  I  LC+ GR+ +A ELL   
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM 405

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  D ++Y  L+  ++K  +  +A  LF  +    +NP I  Y TLI   C    +
Sbjct: 406 ----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNL 461

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           + +++  +E  +  ++P   TYT+++ G++++GN+S A + +  M + G  PD   Y   
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR 521

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKL 607
             G  +    ++A + +E M+ +     ++T   +  +  CK G+   A+     + +  
Sbjct: 522 TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVG 581

Query: 608 WIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +    T  T+IR    + R  MA   + ++L K
Sbjct: 582 LVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSK 615



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 8/334 (2%)

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
           G+ K R F+   ++     +  GN   +      ++    E G L+    +  EMT+  +
Sbjct: 419 GYIKMRKFVEASLLFDD--LKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLI 476

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                T   ++    + G +  A E++DEM  +G+  D  +Y    V   R+G   +A R
Sbjct: 477 YPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFR 536

Query: 245 WLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
               M+       + T+  + I   C  G   ++++A E   ++ R G  P+  T+T +I
Sbjct: 537 LHEEMVAEDHHAPDLTIYNVRIDGLCKVG---NLEKAIEFQRKIFRVGLVPDHVTYTTVI 593

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            G  +KG  + A  L+ +++ S    P+V TY  +I G+ K  ++ +A      MK++G+
Sbjct: 594 RGYLEKGRFKMARDLYDEML-SKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGV 652

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN  T+ +L++G CK GN + AY  +  M +EG +PN Y+Y  +I   C   + +E  +
Sbjct: 653 RPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVK 712

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           L K+   +E++ D  T+  L  +HL++     AL
Sbjct: 713 LYKEMLDKEIEPDGYTHRALF-KHLEKDHESMAL 745



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%)

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           Y K+    +  +  E+M  +G LP+      ++          +A ++ + M   G  P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N ++D   K G ++   ++  +  +R ++  ++TY IL++   K  + ++A     
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M ++G     +++  LI  +C+Q    E+     E + AG++PT  TY   I      G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            I  A +    M     APD ++Y  L+ G  K  K  EA   ++ +    I+P  VT  
Sbjct: 394 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           TL    C+ G+   A  + E +  +L    + T  TL++       + MA   + ++L K
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 21/325 (6%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG------LLPN 366
           E AFR F  + R  + K +   + AM+    + + M+ A ++ ER    G      LL +
Sbjct: 136 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINLGMHEIDDLLID 195

Query: 367 TN--------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            N            L++ + K    E+     + M ++G  P++   N ++  L     +
Sbjct: 196 GNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMM 255

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A E+ +      +    IT+  +L    K  + ++   ++  M +  +      Y  L
Sbjct: 256 NKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 315

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  F +  KM+E+ +F  +   +G   T  ++  +I GY + G    A      M   G 
Sbjct: 316 INGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGI 375

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P   TY   I  LC+  ++D+A +   SM     +P  V+  TL + Y K      A +
Sbjct: 376 YPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASL 431

Query: 599 ILESL---DKKLWIRTVNTLIRKLC 620
           + + L   +    I T NTLI  LC
Sbjct: 432 LFDDLKAGNINPSIVTYNTLIDGLC 456



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 13/228 (5%)

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K++  ++ L  F +M++ G  P +     ++      + M ++++ ++  +  G+ PT
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +M+    + G++    K +  M +       +TY  LI+G  K  K++EA +F+ 
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW--IRTVNTLIRKLCSE 622
            M   G      +   L   YCKQG  D A   +  E L+  ++    T N  IR LC  
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWG-VTDEMLNAGIYPTTSTYNIYIRALCEF 392

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDL 666
            R+  A     +LL      D VS   L +   +  K+     LF DL
Sbjct: 393 GRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDL 436


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 212/471 (45%), Gaps = 11/471 (2%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  + +P  T T        C LG    A  +   M   G   DA  Y+ ++ A    G 
Sbjct: 168 MLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGG 227

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V EA   L  ML  G   D  T   L+   C  G    +++A  L++ M+ +G  P+V T
Sbjct: 228 VAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLG---RVREAARLVDRMMTQGCMPSVVT 284

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+ GLC+    ++A  +  +L      + NV     +I G   E K+ RA  L E M
Sbjct: 285 YGFLLQGLCRTRQADEACAMLGRLP-----EVNVVMLNTVIRGCLTEGKLARATELYEMM 339

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G  P+ +TY+ L++G CK+G F  A  ++D M ++GC PNI  Y+ ++   C+ G  
Sbjct: 340 GSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 399

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A  +L +   +    +   Y  ++    K  +  QA  L   M   G  PDI  Y T+
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C    M+E+E  F+  I  G+     TY ++I   LR+G     ++    M   GC
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM- 597
             D I+Y  LI  LCK+  +D +    E M+ KGI P   +   L  E CK G    A+ 
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 598 IILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +  E L++ L   I T NTLI  LC       A     KL  ++ + D V+
Sbjct: 580 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 630



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 215/469 (45%), Gaps = 15/469 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           Q ++ +    G + E   ++ EM   G     +T N +V   C LG V  A  + D M  
Sbjct: 216 QTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMT 275

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G      +Y  ++   CR  +  EA     AML R   L    + +L T        G 
Sbjct: 276 QGCMPSVVTYGFLLQGLCRTRQADEA----CAMLGR---LPEVNVVMLNTVIRGCLTEGK 328

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A EL E M  KG  P+V+T+++L+ GLCK G    A R+ L  +      PN+ TY+
Sbjct: 329 LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM-LDEMEEKGCAPNIVTYS 387

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C+    + A  +L++M  +G   N+  Y  +IY  CK G  ++A  L+  M  +
Sbjct: 388 TLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQ 447

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P+I  YN +I  LC    ++EA  + +   +  + A+ ITY  L+   L+    ++ 
Sbjct: 448 GCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEG 507

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L   M+  G   D+ +Y  LI A C++  +  S    +E +T G+ P   +Y  +I  
Sbjct: 508 LRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINE 567

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G +  A++  + M   G  PD +TY  LI+GLCK      A    E +  + + P 
Sbjct: 568 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 627

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRK 618
            VT   L   +CK      A ++L+         +++ W   V   +R+
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 4/264 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G+L +   +V EM + G      T N ++   C   L+E AE +F  +   G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  +Y  ++ A  R GR  E  R  S ML  G  LD  +   LI A C +G   ++ 
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG---NVD 540

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           ++  LLEEMV KG KPN +++ +LI+ LCK G    A  L  +++ +    P++ TY  +
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML-NQGLTPDIVTYNTL 599

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK    + A  LLE++  + + P+  TY  LI  HCKV   + A  L+D     G 
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAY 422
            PN   +  ++    ++    E Y
Sbjct: 660 VPNERTWGMMVQNFVRQTVNLEGY 683



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 13/328 (3%)

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L  ++ R     P+  +Y  ++S   + +    A +L  RM    + P T T+   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
               C++G    A  L+  M + GC P+   Y  +I  L  +G V EA  LL +      
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
            AD  T+  L+         ++A  L  RM+  G  P +  Y  L+   CR ++  E+  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 494 FFQEAITAGLFPTKET--YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                   G  P        ++I G L +G ++ A + ++ M   GC PD  TY  L+ G
Sbjct: 304 ML------GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHG 357

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLWI 609
           LCK  +   A +  + M  KG +P  VT  TL + +C+ G  D A AM+  + L K   +
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD-QMLAKGFSM 416

Query: 610 RT--VNTLIRKLCSEKRVGMAALFFHKL 635
            +   N +I  LC + ++  A     ++
Sbjct: 417 NSQGYNGIIYALCKDGKLDQATRLVQEM 444


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 197/368 (53%), Gaps = 5/368 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C+   V+ A  +F EM  +G+  D  +Y  ++   C  GR ++A R LS ML+R 
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              +  T   LI AF  +G    + +A +L +EM+++   PN+ T+  LI+G C     +
Sbjct: 306 INPNVVTFNSLIDAFAKEG---KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++F  +V  D   P+V TY  +I+G+CK +K+     L   M  +GL+ NT TYT+L
Sbjct: 363 EAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I+G  +  + + A  +   M  +G  PNI  YN ++DGLCK G++++A  + +   + ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D  TY I+     K  + +    LFC +   G+ PD+ AY T+I+ FC++   +E+  
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F +    G  P   TY ++I  +LRDG+ +++ +  + M     A D  TYG L++ + 
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDML 600

Query: 554 KQSKLDEA 561
              +LD+ 
Sbjct: 601 HDGRLDKG 608



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 6/449 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F    R+ E  ++V +M   G    T T   +V    +      A  + + M 
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR 274
            +G   D  +Y  ++   C+ G    A   L+ M ++G I  D    + +I + C   +R
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCK--YR 254

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  L  EM  KG +P+V+T++ LI  LC  G    A RL   ++      PNV T
Sbjct: 255 -HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVT 312

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           + ++I  + KE K+  AE L + M ++ + PN  TY SLI G C     + A  +  LM 
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            + C P++  YN +I+G CK  +V +  EL +   +R L  + +TYT L+    + ++  
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +MV  G++P+I  Y TL+   C+  K++++   F+    + + P   TY  M 
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  + G +      F  ++  G  PD I Y  +ISG CK+   +EA   +  M   G  
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
           P   T  TL   + + GD A +  +++ +
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 210/417 (50%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   GV  +  +Y +M+   CR  +++ A   L  M+  G      TL  L+  FC  
Sbjct: 89  EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC-H 147

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I +A  L+++MV  G++P+  T T L+ GL +     +A  L  ++V     +P+
Sbjct: 148 GNR--ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPD 204

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY A+I+G CK  + + A  LL +M++  +  +   Y+++I   CK  + + A +L  
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  P+++ Y+++I  LC  GR  +A  LL    +R++  + +T+  L+    K+ 
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  LF  M++  ++P+I  Y +LI  FC   ++ E+++ F   ++    P   TY 
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M++ G   + +TY  LI G  + S  D A   ++ M+  
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           G+ P  +T  TL    CK G    AM++ E L K      I T N +   +C   +V
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 39/389 (10%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E+M   G   N+YT+ ++I+ LC++     A  +  K+++   Y P++ T  ++++G+C 
Sbjct: 89  EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL-GYGPSIVTLNSLLNGFCH 147

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +++ A  L+++M E G  P+T T+T+L++G  +      A  L++ M  +GC P++  
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y A+I+GLCK+G    A  LL K  + +++AD + Y+ ++    K      AL LF  M 
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267

Query: 465 KAGLNPDIHAYTTLIA-----------------------------------AFCRQKKMK 489
             G+ PD+  Y++LI+                                   AF ++ K+ 
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+EK F E I   + P   TY S+I G+     +  A + F  M    C PD +TY  LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
           +G CK  K+ +  + +  M  +G+    VT  TL + + +  D   A ++ + +      
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             I T NTL+  LC   ++  A + F  L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 174/383 (45%), Gaps = 5/383 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +  G  E    +   ++ S  +   + +  ++  EM N G+     T + ++   C  G 
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
              A  +  +M  R +  +  ++  ++ A+ + G++ EA++    M+ R    +  T   
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  FC       + +A ++   MV K   P+V T+  LI+G CK         LF  + 
Sbjct: 351 LINGFC---MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R      N  TYT +I G+ +    + A+M+ ++M   G+ PN  TY +L+ G CK G  
Sbjct: 408 RR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E+A  + + + K    P+IY YN + +G+CK G+V++ ++L      + ++ D I Y  +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   K+   ++A  LF +M + G  PD   Y TLI A  R      S +  +E  +   
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586

Query: 504 FPTKETYTSMICGYLRDGNISSA 526
                TY  ++   L DG +   
Sbjct: 587 AGDASTY-GLVTDMLHDGRLDKG 608



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 43/400 (10%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---VRSDNYKPNVH 333
           + +A +L  EMV+    P++   + L+  + K     K F L +     +       N++
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM----KKFDLVISFGEKMEILGVSHNLY 101

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY  MI+  C+  +++ A  +L +M + G  P+  T  SL+ G C       A  L+D M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + G  P+   +  ++ GL +  +  EA  L+++   +  Q D +TY  +++   K+ E 
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL L  +M K  +  D+  Y+T+I + C+ + + ++   F E    G+ P   TY+S+
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I      G  S A +    M +    P+ +T+ +LI    K+ KL EA + ++ MI + I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
            P                                 I T N+LI   C   R+  A   F 
Sbjct: 342 DP--------------------------------NIVTYNSLINGFCMHDRLDEAQQIFT 369

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
            ++ KD   D V+   L N   ++ K      LF D+S+R
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 217/476 (45%), Gaps = 50/476 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  GL+  A  V DEM  RG  A      +++ A CR G    A R L  +  +G  LD+
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDS 178

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
               L+++A C++G    + +  ELL ++   G +P++ ++  ++ GLC     +    L
Sbjct: 179 GNCNLVVSAICEQG---CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            +++VR     PNV T+  +I+  C+     +    L +M E G  P+   Y ++I G C
Sbjct: 236 MVEMVRV-GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGIC 294

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G+ E A D++  M   G  PN+  YN ++ GLC   R +EA +LL + FQ +   D +
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF---------------- 482
           T+ IL+    +     + + L  +M++ G  PD+  YTT+I  F                
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 483 -------------------CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                              CR ++  ++++     I  G  P   T+ ++I    + G +
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLV 474

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A++  ++M   GC+PD I+Y  +I GL K  K +EA +    MI KGI+P  +   ++
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534

Query: 584 AYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           A    ++G +   + + +S+       D  L+    N +I  LC       A  FF
Sbjct: 535 ASALSREGRTDKIIQMFDSIQDATVRSDAALY----NAVISSLCKRWETDRAIDFF 586



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 215/467 (46%), Gaps = 20/467 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +VS+  E G + EG  ++ ++ + G      + N V+   C     +  EE+  EM   G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              + +++  ++   CR G   +    LS M + G   D      +I   C  G     +
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH---E 300

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++L  M   G KPNV  +  ++ GLC     E+A  L  ++ + D    +V T+  +
Sbjct: 301 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV-TFNIL 359

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +C+   ++R   LLE+M E G +P+  TYT++I G CK G  + A  L+  M   GC
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN  +Y  ++ GLC+  R  +A EL+    Q+    + +T+  L++   K+   +QA+ 
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  G +PD+ +Y+T+I    +  K +E+ +     I  G+ P    Y+SM     
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+G     ++ F  +       D   Y A+IS LCK+ + D A  F+  M+  G  P E 
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE- 598

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
                          +T  I++  L  +  +R    L+ +LCS + V
Sbjct: 599 ---------------STYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 131/340 (38%), Gaps = 10/340 (2%)

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           + LI  LC  G T  A R       +      V  Y AMI+GYC+  ++  A  L   + 
Sbjct: 48  SALIRSLCAAGRTADAARAL----DTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              + PN  TY  ++   C  G    A  ++D M   GC       + I++  C+ G  +
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A   L+    +    D     +++S   +Q    + + L  ++   G  PDI +Y  ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C  K+  + E+   E +  G  P   T+ ++I    R+G      +   +M + GC 
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD   Y  +I G+CK    + A      M   G+ P  V   T+    C       A  +
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 600 LESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           L  +   D  L   T N L+   C    V        ++L
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 380


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 221/449 (49%), Gaps = 6/449 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEM 214
           +  +++SF  + R+   FS++ ++   G    T+T   ++ GI  E G +  A  +FD+M
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVE-GKIGEALHLFDKM 157

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D  +Y  ++   C++G  + A R L +M+ +    +      +I + C     
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR-- 215

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +AF L  EMV KG  P+++T+  LI  LC     +    L  ++V S    P+V +
Sbjct: 216 -QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVS 273

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  ++   CKE K+  A  ++++M ++G+ PN  TYT+L+ GHC +   + A  + D M 
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +GC PN+ +YN +I+G CK  R+ +A  L  +  ++EL  D +TY+ L+         +
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ LF  MV     P++  Y  L+   C+ + + E+    +    + L P  +     I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R G + +A   F  ++  G  PD  TY  +I+GLC++  LDEA + +  M   G +
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
                  T+   + +  +++ A+ +L+ +
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEM 542



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 192/396 (48%), Gaps = 8/396 (2%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L  +M   G  PN+YT  +LI+  C       AF +  K+++   ++P+  T+T +I 
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL-GHQPDTATFTTLIR 139

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G   E K+  A  L ++M  +G  P+  TY +LI G CKVGN   A  L+  M ++ C P
Sbjct: 140 GIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 199

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N++AYN IID LCK  +V EA+ L  +   + +  D  TY  L+       E K    L 
Sbjct: 200 NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL 259

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV + + PD+ ++ T++ A C++ K+ E+     + I  G+ P   TYT+++ G+   
Sbjct: 260 NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLL 319

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  AVK F  M   GC P+ I+Y  LI+G CK  ++D+A   +  M  + + P  VT 
Sbjct: 320 SEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 379

Query: 581 VTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL +  C       A+ +   +    +   + T   L+  LC  + +  A      + G
Sbjct: 380 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 439

Query: 638 KDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
            + + D +V+  A+   C      A   LFS+LS +
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 180/370 (48%), Gaps = 5/370 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+   V  A  +F EM  +G+  D  +Y  ++ A C +         L+ M+D
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
              + D  +   ++ A C +G    + +A +++++M+++G +PNV T+T L+DG C    
Sbjct: 265 SKIMPDVVSFNTVVDALCKEG---KVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A ++F  +V      PNV +Y  +I+GYCK +++++A  L   M  Q L+P+T TY+
Sbjct: 322 MDEAVKVFDTMV-CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 380

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI+G C V   + A  L   M      PN+  Y  ++D LCK   + EA  LLK     
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  D     I +    +  E + A  LF  +   GL PD+  Y+ +I   CR+  + E+
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            K F+E    G       Y ++  G+LR+   S A++  Q M   G + D  T    +  
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560

Query: 552 LCKQSKLDEA 561
           L     LD++
Sbjct: 561 L-SDDGLDQS 569



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 225/543 (41%), Gaps = 42/543 (7%)

Query: 12  LRGKPSRTPSLTLF--VIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPP-----QSLVKT 64
           LR +P   PS   F  ++ S+    HH   L+ S Q       S   PP       L+ +
Sbjct: 53  LRMQPP--PSTVDFNKLLTSIAKMKHHSTLLSLSHQ-----MDSFGIPPNIYTLHILINS 105

Query: 65  VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
            C +    +   F + +   +L  Q D  + T     T++  +  E     AL  F   I
Sbjct: 106 FCHLNRVGF--AFSVLAKILKLGHQPDTATFT-----TLIRGIYVEGKIGEALHLFDKMI 158

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRL 169
           G   FR  +  Y      L   GN   A  ++  MV                S  +  ++
Sbjct: 159 G-EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
            E F++  EM   G+     T N ++   C L   ++   + +EM    +  D  S+  +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V A C+ G+VTEA   +  M+ RG   +  T T L+   C       + +A ++ + MV 
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC---LLSEMDEAVKVFDTMVC 334

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           KG  PNV ++  LI+G CK    +KA  LF ++ R +   P+  TY+ +I G C  E++ 
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE-LIPDTVTYSTLIHGLCHVERLQ 393

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  L   M     +PN  TY  L+   CK      A  L+  +      P+I   N  I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DG+C+ G ++ A +L      + LQ D  TY+I+++   ++    +A  LF  M + G  
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            +   Y T+   F R  +   + +  QE +  G F    +  ++    L D  +  ++K 
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARG-FSADASTMTLFVKMLSDDGLDQSLKQ 572

Query: 530 FQR 532
             R
Sbjct: 573 ILR 575



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 155/349 (44%), Gaps = 38/349 (10%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+   +  +++   K +  +    L  +M   G+ PN  T   LI   C +     A+ +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  + K G  P+   +  +I G+  +G++ EA  L  K      + D +TY  L++   K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              T  A+ L   MV+    P++ AY T+I + C+ +++ E+   F E +T G+ P   T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 510 YTSMI------CGY-----------------------------LRDGNISSAVKYFQRMN 534
           Y S+I      C +                              ++G ++ A     +M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           Q G  P+ +TY AL+ G C  S++DEA + +++M+ KG  P  ++  TL   YCK     
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
            AM +   + ++  I    T +TLI  LC  +R+  A   FH+++   Q
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 39/307 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  + G++ E   +V +M   G+     T   ++   C L  ++ A +VFD M  +G
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY  ++  YC++ R+ +A      M  +  I D  T + LI   C       ++
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE---RLQ 393

Query: 279 QAFELLEEMVRKGWKPNVYTHTVL-----------------------------------I 303
            A  L  EMV     PN+ T+ +L                                   I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DG+C+ G  E A  LF  L  S   +P+V TY+ MI+G C+   ++ A  L   M E G 
Sbjct: 454 DGMCRAGELEAARDLFSNL-SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 512

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N   Y ++  G  +     RA  L+  M   G + +       +  L   G  Q   +
Sbjct: 513 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 572

Query: 424 LLKKAFQ 430
           +L++  Q
Sbjct: 573 ILREFVQ 579



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+  F RM++    P    +  L+ +  + K          +  + G+ P   T   +I 
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +     +  A     ++ ++G  PD  T+  LI G+  + K+ EA   ++ MIG+G  P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFF 632
             VT  TL    CK G+++ A+ +L S+ +K     V   NT+I  LC +++V  A   F
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 633 HKLLGKDQNVDRVSLAALKNA 653
            +++ K  + D  +  +L +A
Sbjct: 225 SEMVTKGISPDIFTYNSLIHA 245



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 3/146 (2%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N +   +V    +      G L+    +   +++ GL     T + ++   C  GL
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++F EM   G   +   Y  +   + R    + A + L  M+ RG   D +T+TL
Sbjct: 497 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 556

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVR 289
            +    D G   S+KQ   +L E V+
Sbjct: 557 FVKMLSDDGLDQSLKQ---ILREFVQ 579


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 212/472 (44%), Gaps = 61/472 (12%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC------ELGLVEYA 207
           ++   +V ++   G     + ++ +M   G        N ++G  C         L++ A
Sbjct: 332 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLA 391

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E+ + EM A GV  +  +        C  G+  +A   +  M+ +G I D +T + ++  
Sbjct: 392 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 451

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C+      ++ AF L EEM R G   +VYT+T+++D  CK G  E+A + F ++ R   
Sbjct: 452 LCNAS---KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM-REVG 507

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA- 386
             PNV TYTA+I  Y K +K++ A  L E M  +G LPN  TY++LI GHCK G  E+A 
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567

Query: 387 ---------------------YD-----------------------------LMDLMGKE 396
                                YD                             L+D M  E
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC PN   Y+A+IDGLCK G++ EA E+  +  +    A   TY+ L+  + K      A
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +  +M++    P++  YT +I   C+  K  E+ K  Q     G  P   TYT+MI G
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 747

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +   G I + ++  +RM   G AP+ +TY  LI   CK   LD A    E M
Sbjct: 748 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 243/532 (45%), Gaps = 45/532 (8%)

Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           VSSF       G+ ++ FS++ EM   G    TST ++V+   C    +E A  +F+EM 
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+ AD  +Y +MV ++C+ G + +A +W + M + G   +  T T LI A+       
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK--- 526

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY- 328
            +  A EL E M+ +G  PN+ T++ LIDG CK G  EKA ++F ++  S      D Y 
Sbjct: 527 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 586

Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                   +PNV TY A++ G+CK  ++  A  LL+ M  +G  PN   Y +LI G CKV
Sbjct: 587 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 646

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M + G    +Y Y+++ID   K  R   A ++L K  +     + + Y
Sbjct: 647 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 706

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T ++    K  +T +A  L   M + G  P++  YT +I  F    K++   +  +   +
Sbjct: 707 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 766

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----- 555
            G+ P   TY  +I    ++G +  A    + M Q         Y  +I G  K+     
Sbjct: 767 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 826

Query: 556 SKLDEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
             LDE  Q         Y  +I   I   +  R+ +A    ++  + +A ++  S     
Sbjct: 827 GLLDEIGQDDTAPFLSVYRLLIDNLI---KAQRLEMALRLLEEVATFSATLVDYS----- 878

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T N+LI  LC   +V  A   F ++  K    +  S  +L    + ++K
Sbjct: 879 --STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 928



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 55/500 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++C   S  ++G+ +E  ++V   T N +P  T    +++   CE  L E A +  + M 
Sbjct: 232 LRCFAYSLCKVGKWREALTLV--ETENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMR 288

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A     +  +Y  ++       ++    R L+ M+  G          L+ A+C  G   
Sbjct: 289 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 348

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A++LL++MV+ G  P    + +LI  +C                  D    N    
Sbjct: 349 ---YAYKLLKKMVKCGHMPGYVVYNILIGSIC-----------------GDKDSLNF--- 385

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
                     + ++ AE     M   G++ N    +S     C  G +E+A+ ++  M  
Sbjct: 386 ----------DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 435

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+ +++ LC   +++ A+ L ++  +  L AD  TYTI++    K    +Q
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 495

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A   F  M + G  P++  YT LI A+ + KK+  + + F+  ++ G  P   TY+++I 
Sbjct: 496 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 555

Query: 516 GYLRDGNISSAVKYFQRM----------------NQIGCAPDNITYGALISGLCKQSKLD 559
           G+ + G +  A + F+RM                +     P+ +TYGAL+ G CK  +++
Sbjct: 556 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 615

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLI 616
           EA +  ++M  +G  P ++    L    CK G    A  +   + +  +   + T ++LI
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 617 RKLCSEKRVGMAALFFHKLL 636
            +    KR  +A+    K+L
Sbjct: 676 DRYFKVKRQDLASKVLSKML 695



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 9/349 (2%)

Query: 146 NGNFERAHEVMQ-CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           + N ER + V    ++  F +  R++E   ++  M+  G        + ++   C++G +
Sbjct: 590 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 649

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A+EV  EM   G  A   +Y  ++  Y ++ R   A + LS ML+     +    T +
Sbjct: 650 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 709

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I   C     G   +A++L++ M  KG +PNV T+T +IDG    G  E    L L+ + 
Sbjct: 710 IDGLCKV---GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-LERMG 765

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S    PN  TY  +I   CK   ++ A  LLE MK+     +T  Y  +I G  K   F 
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 823

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--FQRELQADKITYTI 442
            +  L+D +G++   P +  Y  +ID L K  R++ A  LL++   F   L     TY  
Sbjct: 824 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 883

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           L+       + + A  LF  M K G+ P++ ++ +LI    R  K+ E+
Sbjct: 884 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 37/305 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++    ++G+L E   +  EM+ +G P    T + ++    ++   + A +V  +M
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y  M+   C++G+  EA + +  M ++G   +  T T +I  F   G  
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GMI 751

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--------------- 319
           G I+   ELLE M  KG  PN  T+ VLID  CK G  + A  L                
Sbjct: 752 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 811

Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK--E 360
                            L  +  D+  P +  Y  +I    K +++  A  LLE +    
Sbjct: 812 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 871

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L+  ++TY SLI   C     E A+ L   M K+G  P + ++ ++I GL +  ++ E
Sbjct: 872 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 931

Query: 421 AYELL 425
           A  LL
Sbjct: 932 ALLLL 936



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 23/359 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K     +  L+D L  +   EK    FL+ +R D+ +        ++  +C+    + 
Sbjct: 119 GYKHTAPVYNALVD-LIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSI 177

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDL--MGKEGCTPNIYAY 405
           A   L R+K+    P+ +TY  LI    K    + A   +  M L  +  +G T   +AY
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +     LCK G+ +EA  L++         D + YT L+S   + +  ++A+    RM  
Sbjct: 238 S-----LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 289

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
               P++  Y+TL+     +K++   ++     +  G +P+ + + S++  Y   G+ S 
Sbjct: 290 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 349

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVT 579
           A K  ++M + G  P  + Y  LI  +C          LD A + Y  M+  G+   ++ 
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
             +     C  G    A  ++  +  + +I   +T   ++  LC+  ++ +A L F ++
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 6/241 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    ++G+  E + ++  M   G      T   ++     +G +E   E+ + M ++G
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y++++   C+ G +  A   L  M         A    +I     +GF     
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFI 823

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SDNYKPNVHTYTA 337
           ++  LL+E+ +    P +  + +LID L K    E A RL  ++   S        TY +
Sbjct: 824 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 883

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C   K+  A  L   M ++G++P   ++ SLI G  +      A  L+D +    
Sbjct: 884 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 943

Query: 398 C 398
           C
Sbjct: 944 C 944


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 201/382 (52%), Gaps = 4/382 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           VV   C+ G V+ A  + DE+   GV  +A  Y  ++ +Y R          L  M +RG
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                 T T+L+      G    I +   + +EM RK    +VY ++ +I+  C+ G   
Sbjct: 214 VEPTVGTYTILVDGLSRAG---DISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVR 270

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  +F + V     +PN  TY A+I+G+CK  ++  AEMLL  M+ +G+  N   + ++
Sbjct: 271 RASEVFDECV-GHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+C+ G  E+A ++  +M K G   +IY YN +  GLC+  R+++A +LL    ++ +
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             + ++YT L+S H K+ +  +A  LF  M   G  P +  Y  +I  + +   ++E+E+
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           F +E    GL P   TY  ++ G+  +G +  A++ F+ M   G  P+ + Y AL+SGL 
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 554 KQSKLDEACQFYESMIGKGISP 575
           K+ + +EA Q Y+ M+  G++P
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTP 531



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 188/379 (49%), Gaps = 4/379 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           S  ++V  +C+ G V +A   L  +   G  L+      L+ ++  +    ++     LL
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAG---LL 206

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM  +G +P V T+T+L+DGL + G   K   ++ ++ R  N   +V+ Y+A+I+ YC+
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCR 265

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              + RA  + +     G+ PN  TY +LI G CK+G  E A  L+  M   G   N   
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N +IDG C+ G V++A E+     +  ++ D  TY  L     +    + A  L   M 
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P+  +YTTLI+   ++  M E+ + F++    G  P+  TY  MI GY+++G+I 
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A ++ + M + G  PD  TY  L+ G C   K+D A + +E M  +G  P  V    L 
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505

Query: 585 YEYCKQGDSATAMIILESL 603
               K+G S  A  + + +
Sbjct: 506 SGLAKEGRSEEAFQLYDDM 524



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 201/452 (44%), Gaps = 12/452 (2%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           A+ + +++ AY   G    A   L A + R   LD  +LT  + +    G    +  A +
Sbjct: 77  AAFHDMLLRAYADSGAAVRAAEALDATVSRLGRLDPRSLTSSLLSLRRAG---QLPAAAD 133

Query: 283 LLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           LL + +          + +V++DG CK G  + A  L  +L R      N   Y +++  
Sbjct: 134 LLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRH-GVGLNACCYNSLLDS 192

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           Y ++   +    LL+ M+ +G+ P   TYT L+ G  + G+  +   + D M ++    +
Sbjct: 193 YTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGD 252

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +Y Y+A+I+  C+ G V+ A E+  +     ++ ++ TY  L++   K  + + A  L  
Sbjct: 253 VYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLA 312

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M   G+  +   + T+I  +CR   ++++ +        G+     TY ++ CG  R  
Sbjct: 313 DMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN 372

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A K    M + G AP+ ++Y  LIS   K+  + EA + +  M GKG  P  VT  
Sbjct: 373 RMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYN 432

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGK 638
            +   Y K G    A    + ++KK  +  + T   L+   C   +V +A   F ++  +
Sbjct: 433 VMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHR 492

Query: 639 DQNVDRVSLAALKNACYESNK----YALFSDL 666
               + V+  AL +   +  +    + L+ D+
Sbjct: 493 GTKPNVVAYTALVSGLAKEGRSEEAFQLYDDM 524


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 244/538 (45%), Gaps = 45/538 (8%)

Query: 156  MQCMVSSFAEIGRLKEGFSMV--IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +  +V+++A+ G L +   M   +      LP +T   NR++ +  E    + A +++DE
Sbjct: 1079 LGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHC-NRLLKLLVEQRRWDDARKLYDE 1137

Query: 214  MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
            M  +   AD  S  ++V   C   RV E  + + A    G I       +LI  +C    
Sbjct: 1138 MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCR--- 1194

Query: 274  RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            RG + +   LL EM  KG+ P + T+  LI+ L KKG  EK   LFL++ R   + PNV 
Sbjct: 1195 RGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM-RKRGFSPNVQ 1253

Query: 334  -----------------------------------TYTAMISGYCKEEKMNRAEMLLERM 358
                                               T+  +I+G C E  + +AE  L   
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313

Query: 359  KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              + L PN  +YT LI+G C  G    A DL+  M   G TP++  + A+I GL   G+V
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373

Query: 419  QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             EA  + +K  +R++  D   Y +L+S   K+     A  +   M++  + PD   Y TL
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433

Query: 479  IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
            I  F R + + ++ K F+     G+ P   +  +MI GY + G +S A+     M ++GC
Sbjct: 1434 IDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493

Query: 539  APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             PD  TY  +ISG  KQ  L+ A ++   MI +   P  VT  +L   YCK GD+  A  
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEG 1553

Query: 599  ILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +  ++  +     + T   LI  L  + +V  A L+F  +L    + + V+L  L N 
Sbjct: 1554 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1611



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 199/447 (44%), Gaps = 23/447 (5%)

Query: 174  SMVI--EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            +MVI  +M  +G      T N ++   C  G V  AE    E   R +  +  SY  ++ 
Sbjct: 1271 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1330

Query: 232  AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             +C  G +  A   L  M+ RG   D  T   LI         G + +A  + E+M  + 
Sbjct: 1331 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV---VAGKVSEALIVREKMTERQ 1387

Query: 292  WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
              P+V  + VLI GLCKK     A  +  +++   N +P+   Y  +I G+ + E +  A
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 352  EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
              + E M+ +G+ P+  +  ++I G+C+ G    A   M  M K GC P+ + Y  +I G
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 412  LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
              K+G +  A   L    +R+ + + +TY+ L++ + K  +T  A GLF  M    L+P+
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 472  IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR------------ 519
            +  YT LI +  ++ K+  +  +F+  +     P   T   ++ G               
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1626

Query: 520  ----DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                 G  +  V + + +  IG  P N  Y A+I  LC+ + L EA  F   M  KG  P
Sbjct: 1627 TSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVP 1685

Query: 576  CEVTRVTLAYEYCKQGDSATAMIILES 602
              +T ++L Y +C  G S     IL +
Sbjct: 1686 NPITFLSLLYGFCSVGKSVNWRTILPN 1712



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 174/407 (42%), Gaps = 48/407 (11%)

Query: 205  EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
            +  ++    M   G     +    +V AY   G + +A +    + ++   L   T    
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVT---- 1113

Query: 265  ITAFCDKGFRGSIKQ-----AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
                C++  +  ++Q     A +L +EM+ K    + Y+  VL+ GLC +   E+  +L 
Sbjct: 1114 ---HCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKL- 1169

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++        P+V  Y  +I GYC+   M R  +LL  M+ +G LP   TY SLI    K
Sbjct: 1170 IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGK 1229

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             G+ E+   L   M K G +PN+  YN++ID LCK     +A  +LK+ F          
Sbjct: 1230 KGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMF---------- 1279

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
                                      +G +PDI  + TLI   C +  ++++E F +EAI
Sbjct: 1280 -------------------------ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAI 1314

Query: 500  TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
               L P + +YT +I G+   G +  A      M   G  PD +T+GALI GL    K+ 
Sbjct: 1315 RRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVS 1374

Query: 560  EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            EA    E M  + + P       L    CK+     A  ILE + +K
Sbjct: 1375 EALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 177/418 (42%), Gaps = 41/418 (9%)

Query: 243  DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            D  L +M   GA    A L  L+ A+ D G  G   +  E + E  + G  P V     L
Sbjct: 1061 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVRE--QYGSLPEVTHCNRL 1118

Query: 303  IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            +  L ++   + A +L+ +++  D+   N  T   ++ G C           LER  E+G
Sbjct: 1119 LKLLVEQRRWDDARKLYDEMLGKDSGADNYST-CVLVRGLC-----------LERRVEEG 1166

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            L                         L++     GC P++  YN +IDG C++G +    
Sbjct: 1167 L------------------------KLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGL 1202

Query: 423  ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             LL +   +      +TY  L++   K+ + ++   LF  M K G +P++  Y ++I A 
Sbjct: 1203 LLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDAL 1262

Query: 483  CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            C+ +   ++    ++   +G  P   T+ ++I G   +G++  A  + +   +    P+ 
Sbjct: 1263 CKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQ 1322

Query: 543  ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            ++Y  LI G C + +L  A      M+G+G +P  VT   L +     G  + A+I+ E 
Sbjct: 1323 LSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREK 1382

Query: 603  LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
            + ++     V   N LI  LC ++ +  A     ++L K+   D    A L +    S
Sbjct: 1383 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 1440



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 54/276 (19%)

Query: 207  AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
            A ++F+ M  +G+C D  S   M+  YC+ G ++EA   +S M   G I D  T T +I+
Sbjct: 1446 ARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1505

Query: 267  AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             +  +G   ++  A   L +M+++  KPNV T++ LI+G CK G T+ A  LF  + +++
Sbjct: 1506 GYAKQG---NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANM-QAE 1561

Query: 327  NYKPNVHTYTAMISGYCKEEKMNRAEMLLERM---------------------------- 358
               PNV TYT +I    K++K+ RA +  E M                            
Sbjct: 1562 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 1621

Query: 359  ----------KEQGLL------------PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
                       +  LL            P  + Y ++I+  C+      A D  + M K+
Sbjct: 1622 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 1681

Query: 397  GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
            G  PN   + +++ G C  G+      +L   FQ+E
Sbjct: 1682 GYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQE 1717



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 8/290 (2%)

Query: 383  FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY-T 441
            F+   D +  M   G  P      A++      G + +A ++ ++  ++     ++T+  
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
             LL   ++Q     A  L+  M+      D ++   L+   C +++++E  K  +    A
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176

Query: 502  GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            G  P    Y  +I GY R G++   +     M   G  P  +TYG+LI+ L K+  L++ 
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236

Query: 562  CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLI 616
               +  M  +G SP      ++    CK   +  AM+IL+ +     D    I T NTLI
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPD--IITFNTLI 1294

Query: 617  RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
              LC E  V  A  F  + + ++ N +++S   L +      +  + SDL
Sbjct: 1295 TGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 11/466 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P  T T        C LG  + A  +   M   G   DA  Y+ ++ A C  G VTEA 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ ML  G   D  T   ++   C  G    +++A  L++ M+ KG  P V T+  L+
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLG---RVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC+    ++A  +  ++        NV  +  +I G   E K+  A  L E M  +G 
Sbjct: 272 QGLCRVRQADEARAMLGRVPEL-----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 326

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+ +TY+ L++G CK+G    A  L+  M K+G  PN+  Y  ++   CK G   +   
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL++   + L  +   Y  ++    K     +A+GL   M   G NPDI +Y T+I   C
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
             ++M+E+E  F+  +  G+     TY ++I   LRDG    AV+  + M   GC+ D +
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILES 602
           +Y  LI  +CK   +D +    E M  KGI P  V+   L  E CK+     A+ +  + 
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 566

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           L++ L   I T NTLI  LC    +  A     KL  ++ + D ++
Sbjct: 567 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 210/456 (46%), Gaps = 29/456 (6%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +   +GR  E  +++  M  +G          V+   C+ G V  A  + +EM   G  A
Sbjct: 168 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 227

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKG---- 272
           D +++  +V   C +GRV EA R +  M+ +G +    T   L+   C     D+     
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287

Query: 273 -------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                                G + +A EL E M  KG +P+ +T+++L+ GLCK G   
Sbjct: 288 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 347

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A RL L+ +    + PNV TYT ++  +CK    +    LLE M  +GL  N+  Y  +
Sbjct: 348 SAVRL-LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           IY  CK G  + A  L+  M  +GC P+I +YN II  LC   +++EA  + +   +  +
Sbjct: 407 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
            A+ ITY  ++   L+    + A+ L   M+  G + D+ +Y  LI A C+   +  S  
Sbjct: 467 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    G+ P   +Y  +I    ++  +  A++  ++M   G APD +TY  LI+GLC
Sbjct: 527 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 586

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           K   +  A    E +  + + P  +T   L   +CK
Sbjct: 587 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 178/373 (47%), Gaps = 39/373 (10%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+G     G +  A E+++ M  +G   DA +Y +++   C++GR+  A R L  M  
Sbjct: 299 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 358

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +G   +  T T+++ +FC  G     +    LLEEM  KG   N   +  +I  LCK G 
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRA---LLEEMSAKGLTLNSQGYNGMIYALCKDGR 415

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A  L  ++ RS    P++ +Y  +I   C  E+M  AE + E + E+G++ N  TY 
Sbjct: 416 MDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 474

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I+   + G ++ A  L   M   GC+ ++ +YN +I  +CK G V  +  LL++  ++
Sbjct: 475 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++ + ++Y IL+SE  K+   + AL L  +M+  GL PDI  Y TLI   C+       
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM------ 588

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                                        G + +A+   ++++     PD ITY  LIS 
Sbjct: 589 -----------------------------GWMHAALNLLEKLHNENVHPDIITYNILISW 619

Query: 552 LCKQSKLDEACQF 564
            CK   LD+A   
Sbjct: 620 HCKVRLLDDAAML 632



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 148/326 (45%), Gaps = 7/326 (2%)

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           + F L+ ++V  D   P   T+       C+  + + A  LL  M   G +P+   Y ++
Sbjct: 141 RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I+  C  G    A  L++ M   GC  ++  ++ ++ G+C  GRV+EA  L+ +   +  
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
               +TY  LL    +  +  +A  +  R+ +     ++  + T+I     + K+ E+ +
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATE 316

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            ++     G  P   TY+ ++ G  + G I SAV+  + M + G AP+ +TY  ++   C
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 376

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIR 610
           K    D+     E M  KG++        + Y  CK G    AM +++ +  +     I 
Sbjct: 377 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 436

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLL 636
           + NT+I  LC+ +++  A   F  LL
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLL 462


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 241/494 (48%), Gaps = 17/494 (3%)

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEIGRLK 170
           S+V  S F+ AI  A+ + F  +   C   L  NG    AH +  +  M++ F    +  
Sbjct: 77  SLVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTC 130

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
             +S++ ++   G    T+T N ++ G+  E G V  A  + D M   G   D  +Y  +
Sbjct: 131 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVSEAVVLVDRMVENGCQPDVVTYNSI 189

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V   CR G  + A   L  M +R    D  T + +I + C  G    I  A  L +EM  
Sbjct: 190 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG---CIDAAISLFKEMET 246

Query: 290 KGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           KG K +V T+  L+ GLCK G W + A  L LK + S    PNV T+  ++  + KE K+
Sbjct: 247 KGIKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L + M  +G+ PN  TY +L+ G+C       A +++DLM +  C+P+I  + ++
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G C   RV +  ++ +   +R L A+ +TY+IL+    +  + K A  LF  MV  G+
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD+  Y  L+   C   K++++ + F++   + +      YT++I G  + G +  A  
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F  +   G  P+ +TY  +ISGLCK+  L EA      M   G +P + T  TL   + 
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544

Query: 589 KQGD-SATAMIILE 601
           + GD +A+A +I E
Sbjct: 545 RDGDLTASAKLIEE 558



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 12/462 (2%)

Query: 163 FAEIGRLKEGFSMVIEMTN----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ I R K+ F++V++       NG+     TLN ++   C      +A  V  ++   G
Sbjct: 85  FSAIARTKQ-FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 143

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  ++      G+V+EA   +  M++ G   D  T   ++   C  G      
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG---DTS 200

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL +M  +  K +V+T++ +ID LC+ G  + A  LF K + +   K +V TY ++
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSL 259

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK  K N   +LL+ M  + ++PN  T+  L+    K G  + A +L   M   G 
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI  YN ++DG C + R+ EA  +L    + +   D +T+T L+  +         + 
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 379

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  + K GL  +   Y+ L+  FC+  K+K +E+ FQE ++ G+ P   TY  ++ G  
Sbjct: 380 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A++ F+ + +       + Y  +I G+CK  K+++A   + S+  KG+ P  +
Sbjct: 440 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 499

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
           T   +    CK+G  + A I+L  +++        T NTLIR
Sbjct: 500 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  +M+  +CR  +   A   L  ++  G   D  T   LI         G +
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF---LEGKV 164

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV  G +P+V T+  +++G+C+ G T  A  L  K+    N K +V TY+ 
Sbjct: 165 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYST 223

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C++  ++ A  L + M+ +G+  +  TY SL+ G CK G +     L+  M    
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  +N ++D   K+G++QEA EL K+   R +  + ITY  L+  +  Q    +A 
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV+   +PDI  +T+LI  +C  K++ +  K F+     GL     TY+ ++ G+
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A + FQ M   G  PD +TYG L+ GLC   KL++A + +E +    +    
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V   T+    CK G    A  +  SL     K  + T   +I  LC +  +  A +   K
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523

Query: 635 L 635
           +
Sbjct: 524 M 524



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 184/352 (52%), Gaps = 4/352 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G ++ A  +F EM  +G+ +   +Y  +V   C+ G+  +    L  M
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + R  + +  T  +L+  F  +G    +++A EL +EM+ +G  PN+ T+  L+DG C +
Sbjct: 280 VSREIVPNVITFNVLLDVFVKEG---KLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 336

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +A  +   +VR +   P++ T+T++I GYC  ++++    +   + ++GL+ N  T
Sbjct: 337 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 395

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+ G C+ G  + A +L   M   G  P++  Y  ++DGLC  G++++A E+ +   
Sbjct: 396 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           + ++    + YT ++    K  + + A  LFC +   G+ P++  YT +I+  C++  + 
Sbjct: 456 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 515

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           E+    ++    G  P   TY ++I  +LRDG+++++ K  + M   G + D
Sbjct: 516 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 4/408 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   +V  M  NG      T N +V   C  G    A ++  +M  R V AD  +Y
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ + CR G +  A      M  +G      T   L+   C  G          LL++
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKD 278

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +   PNV T  VL+D   K+G  ++A  L+ +++ +    PN+ TY  ++ GYC + 
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQN 337

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  +L+ M      P+  T+TSLI G+C V   +    +   + K G   N   Y+
Sbjct: 338 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 397

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G+++ A EL ++     +  D +TY ILL       + ++AL +F  + K+
Sbjct: 398 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 457

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++  I  YTT+I   C+  K++++   F      G+ P   TYT MI G  + G++S A
Sbjct: 458 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               ++M + G AP++ TY  LI    +   L  + +  E M   G S
Sbjct: 518 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 205/442 (46%), Gaps = 48/442 (10%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E  +M+  M  N       T   ++   C +  V+   +VF  +  RG+ A+A +Y 
Sbjct: 338 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 397

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V  +C+ G++  A+     M+  G + D  T  +L+   CD G    +++A E+ E++
Sbjct: 398 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG---KLEKALEIFEDL 454

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            +      +  +T +I+G+CK G  E A+ LF  L      KPNV TYT MISG CK+  
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP-CKGVKPNVMTYTVMISGLCKKGS 513

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A +LL +M+E G  PN  TY +LI  H + G+   +  L++ M   G + +  +   
Sbjct: 514 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 573

Query: 408 IIDGL-----------CKKGRVQEAYELLKKAFQRELQADKITY-------TILLSEHLK 449
           +ID L           C     +   +LL+ +   +++   +T+       TI  S ++ 
Sbjct: 574 VIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVN 633

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF-QEAITAGL----- 503
             E +        M  A LN D+       ++  ++ K ++       E +T GL     
Sbjct: 634 TIEARG-------MNSAELNRDLRKLRR--SSVLKKFKNRDVRVLVTNELLTWGLEDAEC 684

Query: 504 -------FPTKETYTSMICGYLRDG----NISSAVKYFQRMNQIGCAPDNITYGALISGL 552
                   PT   + +   G +R       + +A +  + M Q G AP+ ITY +LI G 
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 553 CKQSKLDEACQFYESMIGKGIS 574
           CK+++LDEA Q  + M+ KG S
Sbjct: 745 CKENRLDEANQMLDLMVTKGDS 766



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF +++RS    P++  ++   S   + ++ N      ++++  G+  N  T   
Sbjct: 60  DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 118

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      AY ++  + K G  P+   +N +I GL  +G+V EA  L+ +  +  
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q D +TY  +++   +  +T  AL L  +M +  +  D+  Y+T+I + CR   +  + 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E  T G+  +  TY S++ G  + G  +      + M      P+ IT+  L+   
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K+ KL EA + Y+ MI +GISP  +T  TL   YC Q   + A  +L+ + +      I
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T  +LI+  C  KRV      F  +  +    + V+ + L     +S K  L  +L Q 
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 670 IA 671
           + 
Sbjct: 419 MV 420



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE L + M ++G+ PNT TY+SLI G CK    + A  ++DLM  +G +   Y    ++ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRY----LLA 773

Query: 411 GLCKKGR 417
           GL +K R
Sbjct: 774 GLMRKKR 780



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  AEE+  EM  RG+  +  +Y  ++  +C+  R+ EA++ L  M+ +G    ++ +  
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG----DSDIRY 770

Query: 264 LITAFCDKGFRGSIKQAFELLEE 286
           L+     K  +GS  + +E L +
Sbjct: 771 LLAGLMRKKRKGSETEGWENLPD 793


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 224/487 (45%), Gaps = 7/487 (1%)

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKE---GFSMV 176
           + +++  + + H  RLY+  A  L+S    +          +    + R ++    ++ +
Sbjct: 210 YSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFL 269

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
             +   G P  T   N V+   C  G V+ A EVFD M   G+  D  SY ++V   C+ 
Sbjct: 270 QMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQ 329

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G V      L  M   G      + + L+   C  G    ++ AFEL   +  +G+K + 
Sbjct: 330 GDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAG---KVELAFELFRRLEEQGFKHDH 386

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             ++++++G C+    E    L+  +V   N+ P+ + YT++I  +C+   +  A  + E
Sbjct: 387 IVYSIILNGCCQHLNIEVVCDLWNDMVHH-NFVPDAYNYTSLIYAFCRHRNLTDALGVFE 445

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M + G+ PN  T T L+ G  K    + A+  +  + + G  PN+  Y  II+GLCK  
Sbjct: 446 LMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVN 505

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +    + +     +R    D + Y+I++   +K  +  +A  LF +M+  G  P++  YT
Sbjct: 506 KSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYT 565

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI   C   ++ E    F+  I  GL P +  YTS+I  Y +  N+ +A++ F+ M ++
Sbjct: 566 SLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKL 625

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G + D   Y  LI G  K   +D A    E M  KG++P  VT   L   Y K GD   A
Sbjct: 626 GLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKA 685

Query: 597 MIILESL 603
            +   S+
Sbjct: 686 NMTYNSM 692



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 235/505 (46%), Gaps = 43/505 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V   ++  F E+   ++      E    G+ L     N ++    E   + YA  +FD+
Sbjct: 142 QVYATIIRIFVELSMFEDALLTYTEAKKVGVEL--QLCNFLLKCLVERNQIIYARSLFDD 199

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M + G   +  SY +++ AY      T  DR   A                         
Sbjct: 200 MKSSGPSPNVYSYSVLMSAY------THGDRLYLA------------------------- 228

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +AFELL EM  KG KPN  T+   + GL +      A+  FL+++       N +
Sbjct: 229 -----EAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWN-FLQMLCQRGNPCNTY 282

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            + A+I G+C+E ++  A  + + MK+ GL+P+T++Y+ L+ G CK G+    YDL+  M
Sbjct: 283 CFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEM 342

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + G  P + +Y++++ GLC+ G+V+ A+EL ++  ++  + D I Y+I+L+   +    
Sbjct: 343 ARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNI 402

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +    L+  MV     PD + YT+LI AFCR + + ++   F+  + +G+ P   T T +
Sbjct: 403 EVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL 462

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G+ ++  I  A  +  ++ Q G  P+   Y  +I+GLCK +K D     +  MI +G 
Sbjct: 463 VDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGY 522

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILES-LDK--KLWIRTVNTLIRKLCSEKRVGMAAL 630
            P  V    +   + K      A  +    LD+  K  + T  +LI  LC + R+     
Sbjct: 523 VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVT 582

Query: 631 FFHKLLGKDQNVDRVSLAALKNACY 655
            F  ++ +    DR+   +L   CY
Sbjct: 583 LFKHMIWEGLTPDRILYTSLI-VCY 606



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 188/385 (48%), Gaps = 8/385 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V    + G +  G+ +++EM  NG+ P + S  + + G+ C  G VE A E+F  +  +
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGL-CRAGKVELAFELFRRLEEQ 380

Query: 218 GVCADASSYKLMVVAYCRMGRV-TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           G   D   Y +++   C+   +    D W + M+    + D    T LI AFC      +
Sbjct: 381 GFKHDHIVYSIILNGCCQHLNIEVVCDLW-NDMVHHNFVPDAYNYTSLIYAFCR---HRN 436

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  + E M+  G  PNV T T+L+DG  K+   ++AF LFL  VR     PN+  Y 
Sbjct: 437 LTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAF-LFLHKVRQFGIVPNLCMYR 495

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G CK  K +    +   M ++G +P+T  Y+ +I    K      A+ L   M  E
Sbjct: 496 VIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDE 555

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PN++ Y ++I+GLC   R+ E   L K      L  D+I YT L+  + K++  K A
Sbjct: 556 GTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAA 615

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L +F  M K GL+ D   YT LI  F +   M  ++   +E    GL P+  TYT++I G
Sbjct: 616 LEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIG 675

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPD 541
           Y + G+   A   +  M Q G  PD
Sbjct: 676 YFKIGDERKANMTYNSMLQAGITPD 700



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 193/399 (48%), Gaps = 4/399 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+  EM  +GV  +A++Y   +    R  +V  A  +L  +  RG   +      +I 
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQ 289

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC +G    +++A E+ + M + G  P+ +++++L+DGLCK+G     + L +++ R +
Sbjct: 290 GFCREG---QVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMAR-N 345

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P + +Y++++ G C+  K+  A  L  R++EQG   +   Y+ ++ G C+  N E  
Sbjct: 346 GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVV 405

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            DL + M      P+ Y Y ++I   C+   + +A  + +      +  + +T TIL+  
Sbjct: 406 CDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDG 465

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+    +A     ++ + G+ P++  Y  +I   C+  K       F + I  G  P 
Sbjct: 466 FGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPD 525

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y+ +I  +++   +  A + F +M   G  P+  TY +LI+GLC   +L E    ++
Sbjct: 526 TVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFK 585

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            MI +G++P  +   +L   YCK+ +   A+ I   + K
Sbjct: 586 HMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGK 624



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 190/417 (45%), Gaps = 4/417 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G+++E   +   M   GL   T + + +V   C+ G V    ++  EM   G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     SY  ++   CR G+V  A      + ++G   D+   ++++   C      +I+
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQ---HLNIE 403

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              +L  +MV   + P+ Y +T LI   C+      A  +F +L+      PNV T T +
Sbjct: 404 VVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVF-ELMLDSGVSPNVVTCTIL 462

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+ KE  ++ A + L ++++ G++PN   Y  +I G CKV   +  + +   M K G 
Sbjct: 463 VDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGY 522

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ IID   K  ++ EA+ L  K      + +  TYT L++         + + 
Sbjct: 523 VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVT 582

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+  GL PD   YT+LI  +C++  MK + + F+     GL      YT +I G+ 
Sbjct: 583 LFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFS 642

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           +   +  A    + M   G  P  +TY  LI G  K     +A   Y SM+  GI+P
Sbjct: 643 KVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITP 699



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 5/229 (2%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF--FQEAIT 500
           LL   +++ +   A  LF  M  +G +P++++Y+ L++A+    ++  +E F    E   
Sbjct: 180 LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEM 239

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+ P   TY + + G  R   ++SA  + Q + Q G   +   + A+I G C++ ++ E
Sbjct: 240 KGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQE 299

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIR 617
           A + +++M   G+ P   +   L    CKQGD  T   +L  + +     T+   ++L+ 
Sbjct: 300 AIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLH 359

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            LC   +V +A   F +L  +    D +  + + N C +     +  DL
Sbjct: 360 GLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDL 408



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 97/253 (38%), Gaps = 37/253 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F +   + E F  + ++   G+         ++   C++   ++   +F +M  RG
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRG 521

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y +++ ++ +  ++ EA R    MLD G   +  T T LI   C       + 
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDD---RLP 578

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF------------------- 319
           +   L + M+ +G  P+   +T LI   CK+   + A  +F                   
Sbjct: 579 EVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLI 638

Query: 320 ---------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                          ++ + +    P+V TYT +I GY K     +A M    M + G+ 
Sbjct: 639 GGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGIT 698

Query: 365 PNTNTYTSLIYGH 377
           P+      L +G+
Sbjct: 699 PDAKLSCILGFGN 711


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 9/496 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM + G+     T + ++   C+   ++ A EV + M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  YC  G+  EA   L  M   G   +  T + L+   C  G      
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS---T 323

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G +P++ T+  L+ G   KG   +   L   +VR +  +P+ H +  +
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR-NGIQPDHHVFNIL 382

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+EK+++A ++  +M++ GL PN   Y ++I   CK G+ + A    + M  EG 
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGL 442

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPNI  Y ++I GLC   +  +A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 502

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y TLI   C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   +  A+  F+ M   G +P+ ITY  ++ GL    +   A + Y S+   G      
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF--H 633
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R+  A   F  H
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682

Query: 634 KLLGKDQNVDRVSLAA 649
              G   +V   SL A
Sbjct: 683 SANGLVPDVRTYSLMA 698



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 235/510 (46%), Gaps = 38/510 (7%)

Query: 149 FERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
            ++A EV+  MV +               +   G+ KE    + +M ++G+     T + 
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A ++FD M  RG+  D ++Y+ ++  Y   G + E    L  M+  G
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D+    +LI A+  +     + QA  +  +M + G  PNV  +  +ID LCK G  +
Sbjct: 372 IQPDHHVFNILICAYAKQE---KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A   F +++  +   PN+  YT++I G C  +K ++AE L+  M ++G+  NT  + S+
Sbjct: 429 DAMLYFEQMI-DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  HCK G    +  L DLM + G  P+I  YN +IDG C  G++ EA +LL       +
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D +TY  L++ + + +    AL LF  MV +G++P+I  Y  ++      ++   +++
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            +     +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L 
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---- 609
           K  ++DEA   + +    G+ P   T   +A    +QG        LE LD  L++    
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGS-------LEELD-DLFLSMEE 719

Query: 610 -------RTVNTLIRKLCSEKRVGMAALFF 632
                  R +N+++RKL     +  A  + 
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 209/427 (48%), Gaps = 10/427 (2%)

Query: 168 RLKEGFSMVIE-MTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMC---ARGVCAD 222
           R  +   +V+  MT  G +P + S  N + G+ C+    + A E+   M      G   D
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL-CDENRSQEALELLHMMADDRGGGSPPD 200

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             SY  ++  + + G   +A      MLDRG + D  T + +I A C      ++ +A E
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ---AMDKAME 257

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           +L  MV+ G  P+  T+  ++ G C  G  ++A    LK +RSD  +PNV TY+++++  
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT-LKKMRSDGVEPNVVTYSSLMNYL 316

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK  +   A  + + M ++GL P+  TY +L+ G+   G     + L+DLM + G  P+ 
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           + +N +I    K+ +V +A  +  K  Q  L  + + Y  ++    K      A+  F +
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+  GL P+I  YT+LI   C   K  ++E+   E +  G+      + S+I  + ++G 
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  + K F  M +IG  PD ITY  LI G C   K+DEA +   SM+  G+ P  VT  T
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 583 LAYEYCK 589
           L   YC+
Sbjct: 557 LINGYCR 563



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 218/495 (44%), Gaps = 50/495 (10%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL--- 261
           E A  VFDE+  RG  A        +    R        R+ + M   GA     T+   
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 95

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI   C  G    +   F  L  +V+KG++ +  T T L+ GLC    T  A  + L+
Sbjct: 96  AILIGCCCRAG---RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 322 LV--------------------------------------RSDNYKPNVHTYTAMISGYC 343
            +                                      R     P+V +Y  +++G+ 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           KE   ++A      M ++G+LP+  TY+S+I   CK    ++A ++++ M K G  P+  
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN+I+ G C  G+ +EA   LKK     ++ + +TY+ L++   K   + +A  +F  M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K GL PDI  Y TL+  +  +  + E        +  G+ P    +  +IC Y +   +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+  F +M Q G  P+ + YG +I  LCK   +D+A  ++E MI +G++P  +   +L
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 584 AYEY--CKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
            +    C + D A  + ILE LD+ + + T+  N++I   C E RV  +   F  ++   
Sbjct: 453 IHGLCTCDKWDKAEEL-ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 640 QNVDRVSLAALKNAC 654
              D ++   L + C
Sbjct: 512 VKPDIITYNTLIDGC 526



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 179/388 (46%), Gaps = 5/388 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG  +  H V   ++ ++A+  ++ +   +  +M  +GL         V+ + C+ G
Sbjct: 367 MVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   G+  +   Y  ++   C   +  +A+  +  MLDRG  L+     
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I + C +   G + ++ +L + MVR G KP++ T+  LIDG C  G  ++A +L   +
Sbjct: 486 SIIDSHCKE---GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KP++ TY  +I+GYC+  +M+ A  L + M   G+ PN  TY  ++ G      
Sbjct: 543 V-SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L   + K G    +  YN I+ GLCK     EA  + +     +LQ +  T+ I
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK     +A  LF      GL PD+  Y+ +      Q  ++E +  F      G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYF 530
                    S++   L+ G+I+ A  Y 
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 39/305 (12%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM + G+ L T   N ++   C+ G V  +E++FD M   GV  D  +Y  ++   C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             G++ EA + L++M+  G   D  T   LI  +C       +  A  L +EMV  G  P
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS---RMDDALALFKEMVSSGVSP 584

Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
           N+ T+ +++ GL                                   CK   T++A R+F
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 644

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             L  +D  +    T+  MI    K  +M+ A+ L       GL+P+  TY+ +     +
Sbjct: 645 QNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G+ E   DL   M + GC+ +    N+I+  L ++G +  A   L    ++    +  T
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763

Query: 440 YTILL 444
            + LL
Sbjct: 764 ASFLL 768


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 223/465 (47%), Gaps = 32/465 (6%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G+ C+ G +E A E+FD+M ARG   +  ++ ++V  YCR G  ++    L  M
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM 208

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G + +N     LI++FC +   G    A +L+++M   G  P+V T    I  LC  
Sbjct: 209 RTMGILPNNVLYNTLISSFCKE---GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGS 265

Query: 310 GWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           G   +A R+F  +   +      PNV TY  M+ G+CKE  +  A+ L++ MK      N
Sbjct: 266 GKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFIN 325

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             +Y   + G  + G    A+ ++  M   G  P+IY+YN ++DGLCK G + +A  L+ 
Sbjct: 326 LESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMG 385

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              +  +  D +TY+ LL  +  + +  +A  L   M+    +P+ +    L+ +  ++ 
Sbjct: 386 LMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEG 445

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG--------- 537
           ++ E+E   Q+    G      T   +I     +G +  A++    M   G         
Sbjct: 446 RISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGN 505

Query: 538 --------------CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                         C PD +TY  +ISGLCK  +LD+A + +  M+ KG+ P      T 
Sbjct: 506 SFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTF 565

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
            + +C++G  ++A  +L+ ++K+     ++T N+LI  L S+ ++
Sbjct: 566 IHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQI 610



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/578 (23%), Positives = 247/578 (42%), Gaps = 68/578 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SSF + G+  +   +V +M  +GL     T N  +   C  G +  A  +F +M    
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 219 VCA----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +  +YKLM++ +C+ G + EA   +  M      ++  +  + +      G  
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNG-- 340

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +A+ +L+EM+  G +P++Y++ +++DGLCK G    A R+ + L+  +   P+  T
Sbjct: 341 -KLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA-RMLMGLMIRNGILPDTVT 398

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ ++ GYC + K+  A  LL  M      PNT T   L++   K G    A +L+  M 
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ-----------------------R 431
           ++G   +    N II+ LC  G++ +A E++   +                        +
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           +   D +TY+ ++S   K      A   F  M+  GL PD   Y T I +FCR+ K+  +
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +  ++    G   T +TY S+I G      I         M + G +PD  TY  +++ 
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNC 638

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---------- 601
           LC+  ++++A    + M+ KGISP   +   L   +CK  D   +  + E          
Sbjct: 639 LCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKE 698

Query: 602 -------------------------SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
                                    +LD+   I       LI +LC ++++  A+   H+
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHR 758

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           L+ K    D  S   + +   +     +  +L++R+ E
Sbjct: 759 LIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 199/456 (43%), Gaps = 36/456 (7%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           VE    ++ +M    V  +A ++ L++   C  G + +A      M  RG   +  T  +
Sbjct: 128 VELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGI 187

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  +C  G      +  ELL +M   G  PN   +  LI   CK+G T  A +L  K+ 
Sbjct: 188 LVRGYCRAGLA---SKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKM- 243

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK---EQGLL-PNTNTYTSLIYGHCK 379
           R D   P+V T+ + IS  C   K+  A  +   M+   E GL  PN  TY  ++ G CK
Sbjct: 244 REDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCK 303

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E A  L+D M +     N+ +YN  + GL + G++ EA+ +LK+     ++ D  +
Sbjct: 304 EGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYS 363

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y I++    K      A  L   M++ G+ PD   Y+TL+  +C + K+ E+     E I
Sbjct: 364 YNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI 423

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           +    P   T   ++    ++G IS A    Q+MN+ G   D +T   +I+ LC   +LD
Sbjct: 424 SNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLD 483

Query: 560 EACQFYESMI-----------------------GKGISPCEVTRVTLAYEYCKQG--DSA 594
           +A +    M                        GK  +P  VT  T+    CK G  D A
Sbjct: 484 KAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDA 543

Query: 595 TAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMA 628
               I E + K L   +   +T I   C E ++  A
Sbjct: 544 KKKFI-EMMSKGLQPDSAIYDTFIHSFCREGKISSA 578



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 215/498 (43%), Gaps = 65/498 (13%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           E+A T+V ++   A  +   S+  W +G                 LI N           
Sbjct: 308 EEAKTLVDTMKRNANFINLESYNIWLLG-----------------LIRN----------- 339

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
                    G+L E + ++ EM   G+     + N V+   C+ G++  A  +   M   
Sbjct: 340 ---------GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN 390

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  +Y  ++  YC  G+V EA+  L  M+      +  T  +L+ +   +   G I
Sbjct: 391 GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE---GRI 447

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------F 319
            +A  LL++M  KG+  +  T  ++I+ LC  G  +KA  +                  F
Sbjct: 448 SEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSF 507

Query: 320 LKLVRS----DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           + LV          P++ TY+ +ISG CK  +++ A+     M  +GL P++  Y + I+
Sbjct: 508 IGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIH 567

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
             C+ G    A+ ++  M K GC   +  YN++I GL  K ++ E Y L+ +  ++ +  
Sbjct: 568 SFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSP 627

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D  TY  +L+   +      A  +   M++ G++P+I ++  LI AFC+    K S + F
Sbjct: 628 DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687

Query: 496 QEAITAGLFPTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           + A+   +   KE  YT M    L  G ++ A + F+          N  Y  LI  LCK
Sbjct: 688 EIALN--VCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCK 745

Query: 555 QSKLDEACQFYESMIGKG 572
             KL+ A      +I KG
Sbjct: 746 DEKLEAASDVLHRLIDKG 763



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 165/396 (41%), Gaps = 45/396 (11%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           L+  L K G+  KA   F K +RS+    +P+++ Y  ++    +E ++     L + M 
Sbjct: 81  LVTVLAKSGFFNKAISHF-KSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              + P   T+  LI   C  G+ E A +L D M   GC PN + +  ++ G C+ G   
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +  ELL +     +  + + Y  L+S   K+ +T  A  L  +M + GL P +  + + I
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259

Query: 480 AAFCRQKKMKESEKFFQE-------------AITAGL----------------------- 503
           +A C   K+ E+ + F++              IT  L                       
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319

Query: 504 ---FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
              F   E+Y   + G +R+G +  A    + M  IG  PD  +Y  ++ GLCK   L +
Sbjct: 320 NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIR 617
           A      MI  GI P  VT  TL + YC +G    A  +L  +   +      T N L+ 
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            L  E R+  A     K+  K   VD V+   + NA
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINA 475



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/389 (21%), Positives = 164/389 (42%), Gaps = 67/389 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  + GR+ E  +++ +M   G  + T T N ++   C  G ++ A E+ + M   G
Sbjct: 437 LLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496

Query: 219 VCA-----------------------DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
             A                       D  +Y  ++   C+ GR+ +A +    M+ +G  
Sbjct: 497 SAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQ 556

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D+A     I +FC +G    I  AF++L++M ++G    + T+  LI GL   G   + 
Sbjct: 557 PDSAIYDTFIHSFCREG---KISSAFQVLKDMEKRGCNKTLQTYNSLILGL---GSKNQI 610

Query: 316 FRLF--LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           F L+  +  +R     P+V TY  M++  C+  ++N A  +L+ M ++G+ PN +++  L
Sbjct: 611 FELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRIL 670

Query: 374 IYGHCKVGNFERAYDLMDLM---------------------GKEGCTPNIYA-------- 404
           I   CK  +F+ ++++ ++                      GK      ++         
Sbjct: 671 IKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFD 730

Query: 405 -----YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
                Y  +ID LCK  +++ A ++L +   +  Q D  ++  ++    K      A  L
Sbjct: 731 IGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADEL 790

Query: 460 FCRMVKAG--LNPDIHAYTTLIAAFCRQK 486
             RM++     N +  AY  +     R K
Sbjct: 791 AERMMEMASESNKENKAYPNVKGHILRNK 819



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 146/337 (43%), Gaps = 41/337 (12%)

Query: 138 VCATSLISNGNFERAHEVMQCM-VSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRV 194
           +   +L +NG  ++A E++  M     A +G L   F  +++ T +G        T + +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           +   C+ G ++ A++ F EM ++G+  D++ Y   + ++CR G+++ A + L  M  RG 
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGC 590

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
              N TL    +     G +  I + + L++EM  KG  P+V T+  +++ LC+ G    
Sbjct: 591 ---NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIND 647

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKE----------------------------- 345
           A  +  ++++     PN+ ++  +I  +CK                              
Sbjct: 648 APSVLDEMLQK-GISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFN 706

Query: 346 -----EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
                 K+  A+ L E   ++        Y  LI   CK    E A D++  +  +G   
Sbjct: 707 ELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQF 766

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           +  ++  +IDG  K G    A EL ++  +   +++K
Sbjct: 767 DPASFMPVIDGFGKMGNKHVADELAERMMEMASESNK 803


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 234/496 (47%), Gaps = 9/496 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM + G+     T + ++   C+   ++ A EV + M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  YC  G+  EA   L  M   G   +  T + L+   C  G     +
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F+    M ++G +P++ T+  L+ G   KG   +   L   +VR +  +P+ H +  +
Sbjct: 327 KIFD---SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR-NGIQPDHHVFNIL 382

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+EK+++A ++  +M++ GL PN   Y ++I   CK G+ + A    + M  EG 
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGL 442

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPNI  Y ++I GLC   +  +A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 502

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ PDI  Y TLI   C   KM E+ K     ++ G+ P   TY ++I GY 
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   +  A+  F+ M   G +P+ ITY  ++ GL    +   A + Y S+   G      
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF--H 633
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R+  A   F  H
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682

Query: 634 KLLGKDQNVDRVSLAA 649
              G   +V   SL A
Sbjct: 683 SANGLVPDVRTYSLMA 698



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 235/510 (46%), Gaps = 38/510 (7%)

Query: 149 FERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
            ++A EV+  MV +               +   G+ KE    + +M ++G+     T + 
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A ++FD M  RG+  D ++Y+ ++  Y   G + E    L  M+  G
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D+    +LI A+  +     + QA  +  +M + G  PNV  +  +ID LCK G  +
Sbjct: 372 IQPDHHVFNILICAYAKQE---KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A   F +++  +   PN+  YT++I G C  +K ++AE L+  M ++G+  NT  + S+
Sbjct: 429 DAMLYFEQMI-DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I  HCK G    +  L DLM + G  P+I  YN +IDG C  G++ EA +LL       +
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D +TY  L++ + + +    AL LF  MV +G++P+I  Y  ++      ++   +++
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            +     +G      TY  ++ G  ++     A++ FQ +       +  T+  +I  L 
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---- 609
           K  ++DEA   + +    G+ P   T   +A    +QG        LE LD  L++    
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGS-------LEELD-DLFLSMEE 719

Query: 610 -------RTVNTLIRKLCSEKRVGMAALFF 632
                  R +N+++RKL     +  A  + 
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 6/382 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDRG + D  T + +I A C      ++
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ---AM 252

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  P+  T+  ++ G C  G  ++A    LK +RSD  +PNV TY++
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT-LKKMRSDGVEPNVVTYSS 311

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++  CK  +   A  + + M ++GL P+  TY +L+ G+   G     + L+DLM + G
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + +N +I    K+ +V +A  +  K  Q  L  + + Y  ++    K      A+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+  GL P+I  YT+LI   C   K  ++E+   E +  G+      + S+I  +
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G +  + K F  M +IG  PD ITY  LI G C   K+DEA +   SM+  G+ P  
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551

Query: 578 VTRVTLAYEYCK--QGDSATAM 597
           VT  TL   YC+  + D A A+
Sbjct: 552 VTYGTLINGYCRVSRMDDALAL 573



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 218/495 (44%), Gaps = 50/495 (10%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL--- 261
           E A  VFDE+  RG  A        +    R        R+ + M   GA     T+   
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 95

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI   C  G    +   F  L  +V+KG++ +  T T L+ GLC    T  A  + L+
Sbjct: 96  AILIGCCCRAG---RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 322 LV--------------------------------------RSDNYKPNVHTYTAMISGYC 343
            +                                      R     P+V +Y  +++G+ 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           KE   ++A      M ++G+LP+  TY+S+I   CK    ++A ++++ M K G  P+  
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN+I+ G C  G+ +EA   LKK     ++ + +TY+ L++   K   + +A  +F  M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K GL PDI  Y TL+  +  +  + E        +  G+ P    +  +IC Y +   +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+  F +M Q G  P+ + YG +I  LCK   +D+A  ++E MI +G++P  +   +L
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 584 AYEY--CKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
            +    C + D A  + ILE LD+ + + T+  N++I   C E RV  +   F  ++   
Sbjct: 453 IHGLCTCDKWDKAEEL-ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 640 QNVDRVSLAALKNAC 654
              D ++   L + C
Sbjct: 512 VKPDIITYNTLIDGC 526



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 179/388 (46%), Gaps = 5/388 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG  +  H V   ++ ++A+  ++ +   +  +M  +GL         V+ + C+ G
Sbjct: 367 MVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   G+  +   Y  ++   C   +  +A+  +  MLDRG  L+     
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I + C +   G + ++ +L + MVR G KP++ T+  LIDG C  G  ++A +L   +
Sbjct: 486 SIIDSHCKE---GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   KP++ TY  +I+GYC+  +M+ A  L + M   G+ PN  TY  ++ G      
Sbjct: 543 V-SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L   + K G    +  YN I+ GLCK     EA  + +     +LQ +  T+ I
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK     +A  LF      GL PD+  Y+ +      Q  ++E +  F      G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYF 530
                    S++   L+ G+I+ A  Y 
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 39/305 (12%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM + G+ L T   N ++   C+ G V  +E++FD M   GV  D  +Y  ++   C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             G++ EA + L++M+  G   D  T   LI  +C       +  A  L +EMV  G  P
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS---RMDDALALFKEMVSSGVSP 584

Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
           N+ T+ +++ GL                                   CK   T++A R+F
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 644

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             L  +D  +    T+  MI    K  +M+ A+ L       GL+P+  TY+ +     +
Sbjct: 645 QNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G+ E   DL   M + GC+ +    N+I+  L ++G +  A   L    ++    +  T
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763

Query: 440 YTILL 444
            + LL
Sbjct: 764 ASFLL 768


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 214/448 (47%), Gaps = 35/448 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F+++G     FS+  ++   G      T N ++   C  G +  A    D++ A+G
Sbjct: 102 LINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG 161

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCD------- 270
              D  SY  ++   C++GR+T A + L   +D   +  NA +  ++I   C        
Sbjct: 162 FHLDQVSYGTLINGLCKVGRITAALQLLKR-VDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220

Query: 271 -----------------------KGFRG--SIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                   GF     +  A +L  +M ++   PNVYT  +L+DG
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDG 280

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            CK+G    A ++ L ++  D+ KP+V TY +++ GYC   K+N+A+ + + M   G++ 
Sbjct: 281 FCKEGKVNDA-KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIA 339

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N   YT+++ G CK+   + A +L + M      PN+  Y+++IDGLCK GR+  A +L+
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +   R    + +TY+ +L    K     +A+ L   +   G+ PD++ YT LI   C+ 
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++++++  F++ +  G       YT MI G+   G    A+    +M   GC P+  TY
Sbjct: 460 GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTY 519

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGI 573
             +I  L ++ + D A +    MI +G+
Sbjct: 520 ELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 200/413 (48%), Gaps = 7/413 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+ +D  ++ +++  + ++G  + +    + +L +G      T   LI   C   
Sbjct: 86  QMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLC--- 142

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I QA    +++V +G+  +  ++  LI+GLCK G    A +L LK V     +PN 
Sbjct: 143 LKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQL-LKRVDGKLVQPNA 201

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I   CK + +N A  L  +M  + + P+  TY +LI G   V     A DL + 
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M KE   PN+Y +N ++DG CK+G+V +A  +L    + +++ D +TY  L+  +    +
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +F  M   G+  ++  YTT++  FC+ K + E+   F+E     + P   TY+S
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  + G I  A+K    M+  G  P+ +TY +++  LCK   +D+A     ++  +G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
           I P   T   L    C+ G    A  + E L  K   L +     +I+  C +
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 214/456 (46%), Gaps = 4/456 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS  +        S+  +M  NG+     T N ++    +LGL   +  +F ++  +G
Sbjct: 67  ILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A ++  ++   C  G + +A  +   ++ +G  LD  +   LI   C     G I 
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK---VGRIT 183

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL+ +  K  +PN   + ++ID +CK      AF L+ ++V +    P+V TY A+
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV-AKRICPDVFTYNAL 242

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG+    K+N A  L  +MK++ + PN  T+  L+ G CK G    A  ++ +M K+  
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN+++DG C   +V +A ++        + A+   YT +++   K     +A+ 
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M    + P++  Y++LI   C+  ++  + K   E    G  P   TY+S++    
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ ++  A+     +   G  PD  TY  LI GLC+  +L++A   +E ++ KG +    
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
               +   +C +G    A+ +L  ++    I    T
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKT 518



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 3/320 (0%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L+   N  P    +  ++S   K +  + A  L ++M+  G+  +  T+  LI    
Sbjct: 48  FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFS 107

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G    ++ +   + K+G  P    +N +I GLC KG + +A     K   +    D++
Sbjct: 108 QLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQV 167

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +Y  L++   K      AL L  R+    + P+   Y  +I   C+ K + ++   + + 
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 227

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +   + P   TY ++I G+     ++ A+  F +M +    P+  T+  L+ G CK+ K+
Sbjct: 228 VAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKV 287

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN---TL 615
           ++A      M+   I P  VT  +L   YC       A  I +S+     I  V    T+
Sbjct: 288 NDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTM 347

Query: 616 IRKLCSEKRVGMAALFFHKL 635
           +   C  K V  A   F ++
Sbjct: 348 VNGFCKIKMVDEAINLFEEM 367



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 4/211 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           ++   MV+ F +I  + E  ++  EM    +     T + ++   C+LG + YA ++ DE
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  RG   +  +Y  ++ A C+   V +A   L+ + D+G   D  T T+LI   C    
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS-- 459

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G ++ A  + E+++ KG+  +VY +TV+I G C KG+ +KA  L  K+   +   PN  
Sbjct: 460 -GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM-EDNGCIPNAK 517

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           TY  +I    ++++ + AE LL  M  +GLL
Sbjct: 518 TYELVILSLFEKDENDTAEKLLREMIVRGLL 548


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 241/494 (48%), Gaps = 17/494 (3%)

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEIGRLK 170
           S+V  S F+ AI  A+ + F  +   C   L  NG    AH +  +  M++ F    +  
Sbjct: 87  SLVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTC 140

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
             +S++ ++   G    T+T N ++ G+  E G V  A  + D M   G   D  +Y  +
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVSEAVVLVDRMVENGCQPDVVTYNSI 199

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V   CR G  + A   L  M +R    D  T + +I + C  G    I  A  L +EM  
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG---CIDAAISLFKEMET 256

Query: 290 KGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           KG K +V T+  L+ GLCK G W + A  L LK + S    PNV T+  ++  + KE K+
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L + M  +G+ PN  TY +L+ G+C       A +++DLM +  C+P+I  + ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G C   RV +  ++ +   +R L A+ +TY+IL+    +  + K A  LF  MV  G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD+  Y  L+   C   K++++ + F++   + +      YT++I G  + G +  A  
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F  +   G  P+ +TY  +ISGLCK+  L EA      M   G +P + T  TL   + 
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 589 KQGD-SATAMIILE 601
           + GD +A+A +I E
Sbjct: 555 RDGDLTASAKLIEE 568



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 12/462 (2%)

Query: 163 FAEIGRLKEGFSMVIEMTN----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ I R K+ F++V++       NG+     TLN ++   C      +A  V  ++   G
Sbjct: 95  FSAIARTKQ-FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  ++      G+V+EA   +  M++ G   D  T   ++   C  G      
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG---DTS 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL +M  +  K +V+T++ +ID LC+ G  + A  LF K + +   K +V TY ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSL 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK  K N   +LL+ M  + ++PN  T+  L+    K G  + A +L   M   G 
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI  YN ++DG C + R+ EA  +L    + +   D +T+T L+  +         + 
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  + K GL  +   Y+ L+  FC+  K+K +E+ FQE ++ G+ P   TY  ++ G  
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A++ F+ + +       + Y  +I G+CK  K+++A   + S+  KG+ P  +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
           T   +    CK+G  + A I+L  +++        T NTLIR
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  +M+  +CR  +   A   L  ++  G   D  T   LI         G +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL---FLEGKV 174

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV  G +P+V T+  +++G+C+ G T  A  L  K+    N K +V TY+ 
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYST 233

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C++  ++ A  L + M+ +G+  +  TY SL+ G CK G +     L+  M    
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  +N ++D   K+G++QEA EL K+   R +  + ITY  L+  +  Q    +A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV+   +PDI  +T+LI  +C  K++ +  K F+     GL     TY+ ++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A + FQ M   G  PD +TYG L+ GLC   KL++A + +E +    +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V   T+    CK G    A  +  SL     K  + T   +I  LC +  +  A +   K
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 635 L 635
           +
Sbjct: 534 M 534



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 184/352 (52%), Gaps = 4/352 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G ++ A  +F EM  +G+ +   +Y  +V   C+ G+  +    L  M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + R  + +  T  +L+  F  +G    +++A EL +EM+ +G  PN+ T+  L+DG C +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEG---KLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +A  +   +VR +   P++ T+T++I GYC  ++++    +   + ++GL+ N  T
Sbjct: 347 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+ G C+ G  + A +L   M   G  P++  Y  ++DGLC  G++++A E+ +   
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           + ++    + YT ++    K  + + A  LFC +   G+ P++  YT +I+  C++  + 
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           E+    ++    G  P   TY ++I  +LRDG+++++ K  + M   G + D
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 4/408 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   +V  M  NG      T N +V   C  G    A ++  +M  R V AD  +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ + CR G +  A      M  +G      T   L+   C  G          LL++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKD 288

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +   PNV T  VL+D   K+G  ++A  L+ +++ +    PN+ TY  ++ GYC + 
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQN 347

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  +L+ M      P+  T+TSLI G+C V   +    +   + K G   N   Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G+++ A EL ++     +  D +TY ILL       + ++AL +F  + K+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++  I  YTT+I   C+  K++++   F      G+ P   TYT MI G  + G++S A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               ++M + G AP++ TY  LI    +   L  + +  E M   G S
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF +++RS    P++  ++   S   + ++ N      ++++  G+  N  T   
Sbjct: 70  DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      AY ++  + K G  P+   +N +I GL  +G+V EA  L+ +  +  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q D +TY  +++   +  +T  AL L  +M +  +  D+  Y+T+I + CR   +  + 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E  T G+  +  TY S++ G  + G  +      + M      P+ IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K+ KL EA + Y+ MI +GISP  +T  TL   YC Q   + A  +L+ + +      I
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T  +LI+  C  KRV      F  +  +    + V+ + L     +S K  L  +L Q 
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 670 IA 671
           + 
Sbjct: 429 MV 430


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 236/532 (44%), Gaps = 37/532 (6%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    +SL        L S+++  H+   PP       + S+   +  +
Sbjct: 14  SLPPHFLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYS 73

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
            V SL+ +  S            F        L IV                     ++S
Sbjct: 74  TVLSLSKKMDS------------FGIPPDVYTLTIV---------------------INS 100

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           F  + R+    S++ ++   G    T+T   +V   C +G +  A +VFD+M   G   +
Sbjct: 101 FCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPN 160

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y  ++   C+  ++TEA    S M+ +G   D  T   LI A C+       K    
Sbjct: 161 VVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN---LCEWKHVTT 217

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL EMV+    PNV +  +++D LCK+G   +A  +   +++    +P+V TY A++ G+
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG-GVEPDVVTYAALMDGH 276

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C   +M+ A  + + M   G + N  +Y +LI G+CK+   ++A  L + M ++   PN 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y+ +I GLC  GR+Q+A  L  +        + +TY+ILL    K     +A+ L   
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           +  + L+PD+  Y   I   CR   ++ +   F      GL P   T+  MI G  + G 
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           +  A K F+ M++ GC  +  TY  +  GL + +K   A Q  E M+ +G S
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 215/416 (51%), Gaps = 23/416 (5%)

Query: 246 LSAMLDR-GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           LS  +D  G   D  TLT++I +FC       +  A  +L ++++ G +P+  T T L+ 
Sbjct: 78  LSKKMDSFGIPPDVYTLTIVINSFC---HLNRVDFALSVLAKILKLGHQPDTATFTTLVR 134

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC  G   +A  +F K+V  + ++PNV TY  +++G CK+ ++  A  L   M  +G+ 
Sbjct: 135 GLCVVGKIGEALDVFDKMV-GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGIS 193

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY SLI+  C +  ++    L++ M K    PN+ + N ++D LCK+G+V EA+++
Sbjct: 194 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDV 253

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           +    Q  ++ D +TY  L+  H  ++E  +A+ +F  MV+ G   ++ +Y TLI  +C+
Sbjct: 254 VDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCK 313

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            +++ ++   F+E     L P   TY+++I G    G +  A+  F  M   G  P+ +T
Sbjct: 314 IQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVT 373

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATAMIILESL 603
           Y  L+  LCK  +L EA    +++ G  + P +V    +A +  C+ GD   A  +  +L
Sbjct: 374 YSILLDYLCKNHRLAEAMALLKAIEGSNLDP-DVQVYNIAIDGMCRAGDLEAARDLFSNL 432

Query: 604 DKK-----LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             +     +W  T N +IR LC    +  A+  F ++   D+N        L+N C
Sbjct: 433 APRGLQPDVW--THNIMIRGLCKRGLLDEASKLFREM---DEN------GCLRNGC 477



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 223/466 (47%), Gaps = 6/466 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S A++       S+  +M + G+P    TL  V+   C L  V++A  V  ++   G
Sbjct: 62  LLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLG 121

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  +V   C +G++ EA      M+  G   +  T   L+   C       + 
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR---QLT 178

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L  EM+ KG  P+++T+  LI  LC     +    L  ++V+S    PNV +   +
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKS-KIMPNVVSLNIV 237

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CKE K+  A  +++ M + G+ P+  TY +L+ GHC     + A  + D+M + GC
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+ +YN +I+G CK  R+ +A  L ++  ++EL  + +TY+ L+         + A+ 
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G  P++  Y+ L+   C+  ++ E+    +    + L P  + Y   I G  
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G++ +A   F  +   G  PD  T+  +I GLCK+  LDEA + +  M   G      
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT--LIRKLCSE 622
           T  T+     +   ++ A+ +LE +  + +   V+T  L+ K+ S+
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 185/401 (46%), Gaps = 8/401 (1%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A      M+     P ++    L+  + K         L  K+  S    P+V+T 
Sbjct: 36  TLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM-DSFGIPPDVYTL 94

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T +I+ +C   +++ A  +L ++ + G  P+T T+T+L+ G C VG    A D+ D M  
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EG  PN+  Y  +++GLCK  ++ EA  L  +   + +  D  TY  L+       E K 
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
              L   MVK+ + P++ +   ++ A C++ K+ E+       I  G+ P   TY +++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+     +  AVK F  M + GC  + ++Y  LI+G CK  ++D+A   +E M  + + P
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             +T  TL +  C  G    A+ +   +    +   + T + L+  LC   R+  A    
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 633 HKLLGKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
             + G + + D +V   A+   C   +  A   LFS+L+ R
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 138/310 (44%), Gaps = 7/310 (2%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V +  + G++ E   +V  M   G+     T   ++   C    ++ A +VFD M 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   +  SY  ++  YC++ R+ +A      M  +  I +  T + LI   C     G
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC---HVG 350

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A  L  EMV  G  PN+ T+++L+D LCK     +A  L LK +   N  P+V  Y
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL-LKAIEGSNLDPDVQVY 409

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
              I G C+   +  A  L   +  +GL P+  T+  +I G CK G  + A  L   M +
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL---LSEHLKQAE 452
            GC  N   YN I  GL +  +   A +LL++   R   AD  T  +L   LS+      
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQS 529

Query: 453 TKQALGLFCR 462
            KQ L  F R
Sbjct: 530 VKQILCEFMR 539



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 56/136 (41%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N +   +V    +      G L+    +   +   GL     T N ++   C+ GL
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++F EM   G   +  +Y  +     +  + + A + L  ML RG   D +T  L
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 264 LITAFCDKGFRGSIKQ 279
           L+    D G   S+KQ
Sbjct: 517 LVKMLSDDGLDQSVKQ 532


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 211/403 (52%), Gaps = 5/403 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G     F+++ +M    L       N ++   C+   ++ A  +F EM  +G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A R LS M++R    D  T + LI AF  +G    + 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLV 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EMV++   P++ T++ LI+G C     ++A ++F  +V    + P+V TY  +
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     +   M ++GL+ NT TY  LI G  + G+ + A ++   M  +G 
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  YN ++DGLCK G++++A  + +   + +++    TY I++    K  + +    
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+ AY T+I+ FCR+   +E++  F+E    G  P    Y ++I   L
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+  ++ +  + M   G A D  T G L++ +    +LD++
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  ++  A   L  M+  G   +  TL+ L+  +C  
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                I +A  L+++M   G++PN  T   LI GL       +A  L  ++V +   +P+
Sbjct: 165 K---RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPD 220

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +++G CK    + A  LL +M++  L P    Y ++I G CK  + + A +L  
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  Y+++I  LC  GR  +A  LL    +R++  D  T++ L+   +K+ 
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  L+  MVK  ++P I  Y++LI  FC   ++ E+++ F+  ++   FP   TY 
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
           G+ P  +T  TL    CK G    AM++ E L +   +  I T N +I  +C   +V
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 13/451 (2%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ E  ++V +M   G    T T N ++           A  + D M 
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
           A+G   D  +Y ++V   C+ G    A   L+ M    L+ G ++ N     +I   C  
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT----IIDGLCK- 268

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +  A  L +EM  KG +PNV T++ LI  LC  G    A RL   ++      P+
Sbjct: 269 --YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPD 325

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  + C P++  YN +I G CK  RV+E  E+ ++  QR L  + +TY IL+    +  
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A  +F  MV  G+ P+I  Y TL+   C+  K++++   F+    + + PT  TY 
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G  + G +      F  ++  G  PD + Y  +ISG C++   +EA   ++ M   
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565

Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
           G  P      TL     + GD  A+A +I E
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 182/357 (50%), Gaps = 4/357 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N YT+++LI+  C++     A  +  K+++   Y+PN+ T +++++GY
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGY 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++++ A  L+++M   G  PNT T+ +LI+G         A  L+D M  +GC P++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++GLCK+G    A+ LL K  Q +L+   + Y  ++    K      AL LF  
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T++++I  ++++G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K +  M +    P  +TY +LI+G C   +LDEA Q +E M+ K   P  VT  T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           L   +CK       M +   + ++  +    T N LI+ L       MA   F +++
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 39/351 (11%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF ++V+S  + P++  ++ ++S   K  K +    L E+M+  G+  N  TY+ 
Sbjct: 63  DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  ++  M K G  PNI   +++++G C   R+ EA  L+ + F   
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD--------------------- 471
            Q + +T+  L+       +  +A+ L  RMV  G  PD                     
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 472 --------------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
                         +  Y T+I   C+ K M ++   F+E  T G+ P   TY+S+I   
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G  S A +    M +    PD  T+ ALI    K+ KL EA + Y+ M+ + I P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           VT  +L   +C       A  + E +  K     + T NTLI+  C  KRV
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E K++ A  L   M +    P+   ++ L+    K+  F+    L + M   G   N Y 
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+ +I+  C++ ++  A  +L K  +   + + +T + LL+ +       +A+ L  +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  P+   + TLI       K  E+       +  G  P   TY  ++ G  + G+  
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A     +M Q    P  + Y  +I GLCK   +D+A   ++ M  KGI P  VT  +L 
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 585 YEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C  G  + A  +L + +++K+   + T + LI     E ++  A   + +++ +  +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 642 VDRVSLAALKNA 653
              V+ ++L N 
Sbjct: 359 PSIVTYSSLING 370



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 3/191 (1%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L + +   A+ LF  MVK+   P I  ++ L++A  +  K        ++    G+    
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ +I  + R   +  A+    +M ++G  P+ +T  +L++G C   ++ EA    + 
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKR 624
           M   G  P  VT  TL +       ++ AM +++ +  K     + T   ++  LC    
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 625 VGMAALFFHKL 635
             +A    +K+
Sbjct: 237 TDLAFNLLNKM 247


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 229/469 (48%), Gaps = 23/469 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++       RL++  + + E           + N ++   C++G V+ A+  F  M   G
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GS 276
           +  D  SY +++   C  G + EA  + + M + G   D  T  +L       GFR  G 
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-----GFRILGL 355

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I  A+++++ M+  G  P++ T+T+LI G C+ G  E++F+L  K++ S   K ++ TYT
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML-SQGLKLSIVTYT 414

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++S  CK  +++ A +LL  M+  GL P+  TY+         G  E A +L + M  +
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSK 466

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              PN +  +AII GL +KG + EA        + ++  + I Y I++  + K     +A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +  + ++++ G++P I  + +LI  FC++ K+ E+ K        GL PT  TYT+++ G
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y  +G++ S       M      P  ITY  ++ GLCK+ +L E+ Q  + M  +G+ P 
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646

Query: 577 EVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLC 620
           ++T  T+   +CK  D   A      ++  SL       T N LI  LC
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS--PVTYNVLINGLC 693



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 231/497 (46%), Gaps = 58/497 (11%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E      +M N+G+     T N +      LGL+  A +V   M   G+  D  +Y
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------- 272
            +++  +C+MG + E+ +    ML +G  L   T T+L+++ C  G              
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438

Query: 273 ----------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                      RG++++A EL EEM  K   PN +  + +I GL +KG   +A   F  +
Sbjct: 439 IGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 498

Query: 323 VRSD--------------------------NYK--------PNVHTYTAMISGYCKEEKM 348
            +SD                          +YK        P + T+ ++I G+CK+ K+
Sbjct: 499 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL 558

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  LL+ +K  GL+P + TYT+L+ G+C+ G+    +D++  M  +   P    Y  +
Sbjct: 559 AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVV 618

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           + GLCK+GR+ E+ +LLK  + R L  D+ITY  ++    K  + ++A  L  +M++  L
Sbjct: 619 VKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 678

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P    Y  LI   C    +K++++         +  TK  YT++I  +   G++ +A+ 
Sbjct: 679 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 738

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
           +F +M + G       Y A+I+ LCK++ + +A  F+  M+  GI P +   + +   + 
Sbjct: 739 FFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFH 798

Query: 589 KQGDSATAMIILESLDK 605
           + GD  +   I   + K
Sbjct: 799 RSGDPNSVFEIFAMMIK 815



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 186/374 (49%), Gaps = 4/374 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++E   +  EM +  +   +   + ++    E G +  A+  FD +    V  +   Y
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +M+  Y ++G + EA R    ++++G      T   LI  FC KG    + +A +LL+ 
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG---KLAEAVKLLDT 567

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  P   T+T L++G C++G     F + L  + +   KP   TYT ++ G CKE 
Sbjct: 568 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM-LHEMEAKAIKPTQITYTVVVKGLCKEG 626

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ +  LL+ M  +GL P+  TY ++I   CK  + ++A+ L + M +    P+   YN
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+GLC  G +++A  LL     + ++  K+ YT ++  H  + + + AL  F +MV+ 
Sbjct: 687 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 746

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G    I  Y+ +I   C++  + +++ FF   +T G+ P ++    M+  + R G+ +S 
Sbjct: 747 GFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSV 806

Query: 527 VKYFQRMNQIGCAP 540
            + F  M + G  P
Sbjct: 807 FEIFAMMIKCGLLP 820



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 31/372 (8%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           +++  E+   G   N YT+ +LIDGLC++   + A   FL+    + + P+V ++ A++S
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVT-FLRETGGEEFGPSVVSFNALMS 278

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G+CK   ++ A+     M + GLLP+  +Y  L++G C  G+ E A +  + M   G  P
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +I  YN + +G    G +  A++++++     L  D +TYTIL+  H +    +++  L 
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY---------- 510
            +M+  GL   I  YT L+++ C+  ++ E+     E    GL P   TY          
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIE 458

Query: 511 -----------------TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                            +++I G    G IS A  YF  + +   A + I Y  +I G  
Sbjct: 459 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 518

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K   + EA + Y+ +I KGISP  VT  +L Y +CK+G  A A+ +L+++     +    
Sbjct: 519 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 578

Query: 611 TVNTLIRKLCSE 622
           T  TL+   C E
Sbjct: 579 TYTTLMNGYCEE 590



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 3/278 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           ++  N   +  +   Y + E ++ A  +L +MK   L  +  TY SL+Y    + + +  
Sbjct: 163 DWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIM 219

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           +D+ + +   G   N Y    +IDGLC++ R+Q+A   L++    E     +++  L+S 
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K      A   FC M+K GL PD+++Y  L+   C    M+E+ +F  +    G+ P 
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY  +  G+   G IS A K  QRM   G  PD +TY  LI G C+   ++E+ +  E
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKE 399

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
            M+ +G+    VT   L    CK G    A+I+L  ++
Sbjct: 400 KMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 220/431 (51%), Gaps = 14/431 (3%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-SAMLDR 252
           +V   C+L +V+ A E F  M  +G      +   ++    R+ R+  A  W+  A + R
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENA--WVFYADMYR 219

Query: 253 GAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             I  N  T  ++I   C +G    +K+A   L  M   G KP + T+  L+ G   +G 
Sbjct: 220 MEIKSNVYTFNIMINVLCKEG---KLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A R+ +  ++S  ++P++ TY  ++S  C E    RA  +L  MK  GL+P++ +Y 
Sbjct: 277 IEGA-RMIISEMKSKGFQPDLQTYNPILSWMCNE---GRASEVLREMKGIGLVPDSVSYN 332

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI G    G+ E A+   D M K+G  P  Y YN +I GL  + +++ A  L+++  ++
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  D +TY I+++ + +  + K+A  L   M+  G+ P    YT+LI   CR+ K +E+
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           ++ F++ +  G+ P      +++ G+   GN+  A    + M+++   PD++TY  L+ G
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLW 608
           LC + K +EA +    M  +GI P  ++  TL   Y K+GD+  A I+ +   SL     
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572

Query: 609 IRTVNTLIRKL 619
           + T N L++ L
Sbjct: 573 LLTYNALLKGL 583



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 7/433 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L+    F+   E    ++S  + + R++  +    +M    +     T N ++ + C+ G
Sbjct: 181 LMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 240

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A+     M + G+     +Y  +V  Y   GR+  A   +S M  +G   D  T  
Sbjct: 241 KLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYN 300

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +++  C++G      +A E+L EM   G  P+  ++ +LI G    G  E AF    ++
Sbjct: 301 PILSWMCNEG------RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEM 354

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V+     P  +TY  +I G   E K+  AE+L+  ++E+G++ ++ TY  +I G+C+ G+
Sbjct: 355 VKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGD 413

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A+ L D M  +G  P  + Y ++I  LC++ + +EA EL +K   + ++ D +    
Sbjct: 414 AKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNT 473

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H       +A  L   M +  ++PD   Y  L+   C + K +E+ +   E    G
Sbjct: 474 LMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 533

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   +Y ++I GY + G+   A      M  +G  P  +TY AL+ GL K    + A 
Sbjct: 534 IKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAE 593

Query: 563 QFYESMIGKGISP 575
           +    M  +GI P
Sbjct: 594 ELLREMKSEGIVP 606



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 180/357 (50%), Gaps = 9/357 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V  ++  GR+ EG  M+I EM + G      T N ++   C  G    A EV  EM   
Sbjct: 267 LVQGYSLRGRI-EGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGI 322

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D+ SY +++      G +  A  +   M+ +G +    T   LI           I
Sbjct: 323 GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLF---MENKI 379

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A  L+ E+  KG   +  T+ ++I+G C+ G  +KAF L  +++ +D  KP   TYT+
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM-TDGIKPTQFTYTS 438

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C+  K   A+ L E++  +G+ P+     +L+ GHC  GN +RA+ L+  M +  
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   YN ++ GLC +G+ +EA EL+ +  +R ++ D I+Y  L+S + K+ +TK A 
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 558

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            +   M+  G NP +  Y  L+    + +  + +E+  +E  + G+ P   ++ S+I
Sbjct: 559 IVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVI 615



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 7/396 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+LK+    +  M + G+     T N +V      G +E A  +  EM ++G
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++   C  GR +E  R +  +   G + D+ +  +LI    + G    ++
Sbjct: 292 FQPDLQTYNPILSWMCNEGRASEVLREMKGI---GLVPDSVSYNILIRGCSNNG---DLE 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF   +EMV++G  P  YT+  LI GL  +   E A  + ++ +R      +  TY  +
Sbjct: 346 TAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA-EILIREIREKGIVLDSVTYNIV 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+     +A  L + M   G+ P   TYTSLIY  C+      A +L + +  +G 
Sbjct: 405 INGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGM 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++   N ++DG C  G +  A+ LLK+  +  +  D +TY  L+     + + ++A  
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G+ PD  +Y TLI+ + ++   K +     E ++ G  PT  TY +++ G  
Sbjct: 525 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           ++ +   A +  + M   G  P++ ++ ++I  + K
Sbjct: 585 KNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 7/338 (2%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+  YC+   ++ A      MKE+G  P T T   ++    ++   E A+     M 
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +     N+Y +N +I+ LCK+G++++A   L       ++   +TY  L+  +  +   +
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +   M   G  PD+  Y  +++  C + +  E     +E    GL P   +Y  +I
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILI 335

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G   +G++ +A  Y   M + G  P   TY  LI GL  ++K++ A      +  KGI 
Sbjct: 336 RGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALF 631
              VT   +   YC+ GD+  A  + + +     K    T  +LI  LC   +   A   
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQ 668
           F K++GK    D V +  L +  C   N    FS L +
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKE 493



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 4/224 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G  K+ F++  EM  +G+     T   ++ + C       A+E+F+++  +G
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG 463

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D      ++  +C  G +  A   L  M       D+ T   L+   C +G     +
Sbjct: 464 MKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEG---KFE 520

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ EM R+G KP+  ++  LI G  KKG T+ AF +  +++ S  + P + TY A+
Sbjct: 521 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEML-SLGFNPTLLTYNAL 579

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + G  K +    AE LL  MK +G++PN +++ S+I    K  N
Sbjct: 580 LKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 7/280 (2%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           T +   ++ ++   C+   V EA E      ++       T   +LS   +    + A  
Sbjct: 153 TKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWV 212

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  M +  +  +++ +  +I   C++ K+K+++ F     + G+ PT  TY +++ GY 
Sbjct: 213 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYS 272

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G I  A      M   G  PD  TY  ++S +C + +   A +    M G G+ P  V
Sbjct: 273 LRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSV 329

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKL 635
           +   L       GD  TA    + + K+  + T    NTLI  L  E ++  A +   ++
Sbjct: 330 SYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 389

Query: 636 LGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             K   +D V+   + N  C   +    F+   + + +GI
Sbjct: 390 REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGI 429


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 225/483 (46%), Gaps = 45/483 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE-------YAEEVFDEMCARGV 219
           G L+EG  ++ ++  NG+     T N  +   C  G++E        AE    +M  +G+
Sbjct: 230 GHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGL 289

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------ 273
             D  +Y  ++  Y ++G++ +A R L     +G + D  T   LI   C  G       
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALA 349

Query: 274 --------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
                                     +G + +A +L+ +M ++G  P+++T+ ++I+GLC
Sbjct: 350 LFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G    A  L L    +  Y P++ T+  +I GYCK  KM+ A  +L+ M   G+ P+ 
Sbjct: 410 KMGCVSDANNL-LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY S++ G CK    E   +   ++ ++GC PNI  YN +I+ LCK  +V EA +LL++
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE 528

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQK 486
              R L  D +++  ++S      +  +A  LF RM +   +   +  Y  +I AF  + 
Sbjct: 529 IRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKL 588

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            M  ++K F E    G  P   TY  MI G+ + GN++S   +  +  +IG  P   T+G
Sbjct: 589 DMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFG 648

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +I+ LC Q ++ EA      M+  G+ P  V  +  A     +   A   II+E L KK
Sbjct: 649 RVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDA----DKKAVAAPKIIVEDLLKK 704

Query: 607 LWI 609
             I
Sbjct: 705 SHI 707



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 262/603 (43%), Gaps = 66/603 (10%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM--- 159
           V A L  +   + ALS F        F+H    Y      L  +G F+    V+  M   
Sbjct: 10  VAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLN 69

Query: 160 -------------VSSFAEIGRLKEGFSMVIEMT-NNGLPLITSTLNRVVGIACELGLVE 205
                        + ++   G+++E   +   M   N  P I S  N ++ I  E G   
Sbjct: 70  VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFS-YNAIMNILVEYGYFN 128

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A +V+  M   G+  D  ++ + + ++CR  R   A R L+ M  +G  L+      +I
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVI 188

Query: 266 TAFCDKGF--------------------------------RGSIKQAFELLEEMVRKGWK 293
           + F ++ +                                +G +++  +LL ++++ G  
Sbjct: 189 SGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC 248

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---------KPNVHTYTAMISGYCK 344
           PN++T  + I GLC+KG  E A     K+V ++NY         +P+  TY  +I GY K
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANS---KVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             K+  A  +L+  K +G +P+  TY SLI G C+ G+ + A  L +    +G  P+I  
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +I GL ++G V +A +L+    +  +  D  TY ++++   K      A  L    +
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  PDI  + TLI  +C++ KM  +        + G+ P   TY S++ G  +     
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPE 485

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
             ++ F+ + + GC P+ ITY  LI  LCK  K+ EA    E +  +G+ P  V+  T+ 
Sbjct: 486 DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVI 545

Query: 585 YEYCKQGDSATAMIILESLDKKLWI----RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
             +C  GD   A  +   ++++  I     T N +I     +  + MA   FH++  K  
Sbjct: 546 SGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGC 605

Query: 641 NVD 643
           + D
Sbjct: 606 DPD 608


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 209/446 (46%), Gaps = 44/446 (9%)

Query: 169  LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC-ADASSYK 227
            + +   +  EMT  GL     T   ++   C+      A ++ ++M  +G C  D  +Y 
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYG 1089

Query: 228  LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +++ A C+ G  TEA    S M+  G + D    + L+   C     G +K+A E  +EM
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR---FGRLKEALEFFKEM 1146

Query: 288  VRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
              +G   +VYT+  LI GL + G W E  +  FL L+    + P+  T+T +I G CKE 
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTW--FLNLMVDRGFSPDAFTFTILIDGLCKEG 1204

Query: 347  KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            K+  A+ +LE M+ +G  P+  TY +L+ G C VG  E A  L + +   G   N+++YN
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264

Query: 407  AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT------------------------- 441
             +I+G CK  ++ EA+   ++   + L+   +TY                          
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324

Query: 442  ----------ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
                      +LL    K    ++A+ LF  + K    P+I  ++ L+   CR  K++E+
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384

Query: 492  EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             K F E    GL P    Y  +I G    G +S AVK   +M + GC PD+IT+  +I  
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444

Query: 552  LCKQSKLDEACQFYESMIGKGISPCE 577
            L K++++ EA Q  E M  +  SP E
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSPDE 1470



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 241/495 (48%), Gaps = 10/495 (2%)

Query: 185  PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
            P   +    V G+  E G+ + A ++FDEM  +G+  DA +Y +++   C+  +   A +
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIK 1072

Query: 245  WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
             L   +      D  T  ++I A C  G      +A ++  EM+  G  P+V  ++ L+D
Sbjct: 1073 -LHEKMKGNCKGDVFTYGMIIDALCKDGM---TTEALDMFSEMIGAGILPDVVVYSSLMD 1128

Query: 305  GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            GLC+ G  ++A   F K +       +V+TY ++I G  +          L  M ++G  
Sbjct: 1129 GLCRFGRLKEALEFF-KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 365  PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            P+  T+T LI G CK G    A  +++LM  +G  P+I  YN +++GLC  G++++A +L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247

Query: 425  LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +    R ++ +  +Y IL++ + K  +  +A   F  M   GL P    Y TLI A C+
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307

Query: 485  QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              +++ ++K F E  T G F    TY  ++ G  ++G++  A+  FQ + +    P+   
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV 1367

Query: 545  YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
            +  L+ G+C+  KL+EA + ++ +   G+ P  +    L    C +G  + A+ +L  ++
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427

Query: 605  KKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR-VSLAALKNACYESNKY 660
            +K  +    T N +I+ L  E  +  A     ++  ++ + D  V+   L  A ++   +
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 1487

Query: 661  ALFSDLSQRIAEGIG 675
            A    L   + +G+G
Sbjct: 1488 AALVSLPNALQKGVG 1502



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 203/469 (43%), Gaps = 8/469 (1%)

Query: 188  TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            T T N ++    +LG       ++ ++   G+  D  +  +++   C +  V        
Sbjct: 946  TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005

Query: 248  AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
              L RG   D  T+T L+           I  A +L +EM +KG   +  T+ +LI+GLC
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVW---MENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLC 1062

Query: 308  KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            K   T  A +L  K+    N K +V TY  +I   CK+     A  +   M   G+LP+ 
Sbjct: 1063 KARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDV 1120

Query: 368  NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              Y+SL+ G C+ G  + A +    M   G + ++Y YN++I GL + G  +E    L  
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180

Query: 428  AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
               R    D  T+TIL+    K+ +  +A  +   M   G  PDI  Y TL+   C   +
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240

Query: 488  MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            ++++ K F+     G+     +Y  +I GY +D  I  A ++F+ M   G  P  +TY  
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 548  LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-- 605
            LI  LC+  ++  A + +  M   G      T   L    CK G    AM + +S+ K  
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 606  -KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             K  I   + L+  +C   ++  A   F ++       D ++   L N 
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 1409



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 4/361 (1%)

Query: 155  VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
            V   ++      GRLKE      EM   G+     T N ++      GL +      + M
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181

Query: 215  CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              RG   DA ++ +++   C+ G+V EA + L  M  +G   D  T   L+   C     
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC---LV 1238

Query: 275  GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            G ++ A +L E +  +G K NV+++ +LI+G CK    ++AFR F ++ R    KP+  T
Sbjct: 1239 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM-RPKGLKPSTVT 1297

Query: 335  YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
            Y  +I   C+  ++  A+ L   M+  G     +TY  L+ G CK G+ E A DL   + 
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357

Query: 395  KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            K    PNI  ++ ++DG+C+ G+++EA++   +  +  L+ D I Y IL++    +    
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417

Query: 455  QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            +A+ L  +M + G  PD   +  +I    ++ ++ E+ +  +E       P +   + ++
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477

Query: 515  C 515
            C
Sbjct: 1478 C 1478



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 155/385 (40%), Gaps = 72/385 (18%)

Query: 347  KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            K+N A  L +R      +P T+T+  L+    K+G +   + +   +   G  P++Y  N
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 407  AIIDGLC----------------KKG-------------------RVQEAYELLKKAFQR 431
             +I   C                K+G                    + +A +L  +  ++
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 432  ELQADKITYTILLSEHLKQAETKQA----------------------------------L 457
             L  D  TY IL++   K  +T  A                                  L
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEAL 1105

Query: 458  GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             +F  M+ AG+ PD+  Y++L+   CR  ++KE+ +FF+E    G+     TY S+I G 
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             R G       +   M   G +PD  T+  LI GLCK+ K+ EA Q  E M  KG  P  
Sbjct: 1166 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDI 1225

Query: 578  VTRVTLAYEYCKQGDSATAMIILESL-DK--KLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
            +T  TL    C  G    A  + ESL D+  KL + + N LI   C ++++  A  FF +
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285

Query: 635  LLGKDQNVDRVSLAALKNACYESNK 659
            +  K      V+   L  A  +S +
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGR 1310



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 8/255 (3%)

Query: 395  KEGCTPNIYAYNAIIDGLCKKG--RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
            K G   ++  +   +   C+ G  ++ +A +L  ++   E      T+  LL+   K   
Sbjct: 902  KIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGY 961

Query: 453  TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
                  ++ ++   G+ PD++    LI   C  + +      F   +  G  P   T T+
Sbjct: 962  YSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTT 1021

Query: 513  MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            ++ G   +  I  AV+ F  M + G   D  TYG LI+GLCK  K   A + +E M  KG
Sbjct: 1022 LVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM--KG 1079

Query: 573  ISPCEV-TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMA 628
                +V T   +    CK G +  A+ +   +     +  V   ++L+  LC   R+  A
Sbjct: 1080 NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139

Query: 629  ALFFHKLLGKDQNVD 643
              FF ++ G+  + D
Sbjct: 1140 LEFFKEMEGRGISAD 1154



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 20/178 (11%)

Query: 131  HFMRL--YIVCATSLISNGNFERAH---------------EVMQCMVSSFAEIGRLKEGF 173
             F++L  Y V    L  NG+ E A                EV   ++      G+L+E +
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385

Query: 174  SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
                E++ NGL   T   N ++   C  G++  A ++  +M  +G   D+ ++ +++   
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445

Query: 234  CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             +   + EA + L  M +R    D A  ++L+   C   F      A   L   ++KG
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL---CLASFDPQWHAALVSLPNALQKG 1500


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 227/479 (47%), Gaps = 19/479 (3%)

Query: 169 LKEGFSMVIEMTNNG-----LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
           + +  ++V  + + G     LPL     N ++   C  G V  AE VF  +   G  A  
Sbjct: 74  IDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATV 130

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  MV  YCR GR+ +A R +S M       D  T   LI A C    RG +  A  +
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALC---VRGRVPDALAV 184

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            ++M+ +G  P+V T+++L+D  CK     +A  + L  +R+   +P++ TY  +I+  C
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAM-VLLDEMRAKGCEPDIVTYNVLINAMC 243

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
            E  ++ A  +L  +   G  P+  TYT ++   C    ++   +L   M    C P+  
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N I+  LC++G V  A +++    +     D +TY+ +L           A+ L  R+
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              G  PD  AYTT++   C  ++ + +E+   E + +   P + T+ ++I    + G +
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+K  ++M++ GC PD +TY ++I GLC +  +D+A +   ++   G  P  VT  TL
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 584 AYEYC---KQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
               C   +  D+   M+ +   D      T NT+I  LC +K + + A+   K++ ++
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC-QKGLLLQAIETLKIMAEN 541



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 28/457 (6%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R KE   +  EM +N       T N +V   C+ GLV+ A +V D M   G   D  +Y 
Sbjct: 282 RWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYS 341

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ---AFELL 284
            ++   C +GRV +A   LS +   G   D    T ++   C      SI+Q   A EL+
Sbjct: 342 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC------SIEQWEHAEELM 395

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EMV     P+  T   +I  LC+KG  ++A ++  ++   +   P++ TY ++I G C 
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM-SENGCNPDIVTYNSIIDGLCN 454

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E  ++ A  LL  ++  G  P+  T+ +L+ G C V  +E A  LM  M    C P+   
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N +I  LC+KG + +A E LK   +     ++ TY I++   LK  +T++AL L   M 
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
                PD+  Y T+I+   +  KM+E+    +  ++ GL P   TY S+  G  R+    
Sbjct: 575 NG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A++   R+  +G +PD   Y  ++ G C+  + D A   +  M+  G  P         
Sbjct: 633 RAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMP--------- 683

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
                  D +T +I+LE+L  +  +     L+  LCS
Sbjct: 684 -------DESTYIILLEALAYECLLDEAKQLLVNLCS 713



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 234/540 (43%), Gaps = 63/540 (11%)

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           A  LIS   F         ++ +    GR+ +  ++  +M + G      T + ++   C
Sbjct: 149 ARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA----------------- 242
           +      A  + DEM A+G   D  +Y +++ A C  G V EA                 
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268

Query: 243 ------------DRW------LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
                       +RW       + M       D  T   ++T+ C +G    + +A +++
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGL---VDRAIKVV 325

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           + M   G  P++ T++ ++DGLC  G  + A  L  +L +S   KP+   YT ++ G C 
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCS 384

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            E+   AE L+  M      P+  T+ ++I   C+ G  +RA  +++ M + GC P+I  
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN+IIDGLC +  + +A ELL        + D +T+  LL         + A  L   M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
            +   PD   + T+I + C++  + ++ +  +     G  P + TY  ++   L+ G   
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K    M      PD ITY  +IS + K  K++EA      M+  G+SP  +T  +LA
Sbjct: 565 EALKLLSGMTN--GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA--ALFFHK-LLGKDQN 641
           Y  C++  +  A                   IR LC  + +G++  A F++  LLG  QN
Sbjct: 623 YGICREDGTDRA-------------------IRMLCRLQDMGLSPDATFYNDILLGFCQN 663



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 232/493 (47%), Gaps = 8/493 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+ +   GR+++   ++  M     P  T T N ++   C  G V  A  VFD+M  RG
Sbjct: 136 MVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRG 192

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y +++ A C+     +A   L  M  +G   D  T  +LI A C++G    + 
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEG---DVD 249

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +L ++   G KP+  T+T ++  LC     ++   LF ++  S+   P+  T+  +
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA-SNKCAPDEVTFNTI 308

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++  C++  ++RA  +++ M E G +P+  TY+S++ G C VG  + A +L+  +   GC
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  AY  ++ GLC   + + A EL+ +    +   D++T+  +++   ++    +A+ 
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M + G NPDI  Y ++I   C ++ + ++ +      + G  P   T+ +++ G  
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC 488

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
                  A +    M    C PD  T+  +I+ LC++  L +A +  + M   G  P + 
Sbjct: 489 SVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548

Query: 579 TRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           T   +     K G +  A+ +L  + +    + T NT+I  +    ++  A      ++ 
Sbjct: 549 TYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVS 608

Query: 638 KDQNVDRVSLAAL 650
              + D ++  +L
Sbjct: 609 NGLSPDTITYRSL 621


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 210/414 (50%), Gaps = 9/414 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R K+   +  EM ++GLP +  T N ++   C+   +  A  +FD M   GV    ++Y 
Sbjct: 382 RWKDAVCLFEEMADSGLPDVF-TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +++ YC+ G + EA +  S M   G   +  T   L+  +  K        A+ LL+EM
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK---DFDNAYALLDEM 497

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL--FLKLVRSDNYKPNVHTYTAMISGYCKE 345
            + G   N YT+ VLI+G+C     ++   +   LK   S+ + P + TY ++I+G+ K 
Sbjct: 498 KQNGVSCNDYTYNVLINGIC---MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             M  A  + ++M+E+GL PN  TYTS I G+C+ G  + A  +++ + + G  P+I AY
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAY 614

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           NA+I+G C++G +  A +LL    +  L  + + Y  L++ +      K+    +  M+K
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+  D   YTTLI  F +   +  + + + E +  G  P   T+T++  G  R G+I  
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           A K  + M ++   P+   Y  LI+G  +  KL EA + ++ M+  GI P + T
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTT 788



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 237/508 (46%), Gaps = 29/508 (5%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIE 178
           R+Y +  T+L   G+  RA  +++                MV    + GR++E   +  E
Sbjct: 228 RVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDE 287

Query: 179 MTNNGLPL---ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           M + G  +   + +TL R   +  E+G    A  +F E    G+      Y +++    +
Sbjct: 288 MRDAGKKMDVIVATTLMRGYCLRQEVG---NALNLFKETLKDGIVPTKVMYGVLIRGCDQ 344

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           +G   +A      M  +G +     L+L++    +       K A  L EEM   G  P+
Sbjct: 345 VGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR---RWKDAVCLFEEMADSGL-PD 400

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V+T+  LI   C+     +A  LF ++ ++   KP+++TY +++ GYCK+  M+ A  L 
Sbjct: 401 VFTYNNLIHWHCQAHKLREALNLFDRMKKA-GVKPSINTYNSLLMGYCKKGCMDEAVKLY 459

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M  +G  PN  TY +L+ G+    +F+ AY L+D M + G + N Y YN +I+G+C  
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV 519

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
            RV E   +LK           +TY  +++  +K      A  ++ +M + GL P+I  Y
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           T+ I  +CR      + K   +    GL P    Y ++I G+ ++GN+S A++    + +
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G AP+ + Y +LI+G    + + E  +FYESMI  GI     T  TL   + K G+ A 
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAF 699

Query: 596 AMIILESLDKKLWIR---TVNTLIRKLC 620
           A+ +   +  K +I    T   L   LC
Sbjct: 700 ALELYSEMMAKGYIPDAFTFTALTHGLC 727



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 172/382 (45%), Gaps = 12/382 (3%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           M+ RG + D  + T L+     +  RGS  K A  L  EM  +G++ + +    L+    
Sbjct: 148 MVARGVVPDIKSRTDLLI----RTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL 203

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G  E A RLF ++  ++   P+   Y   I+  CK     RA  +L  MKE G     
Sbjct: 204 KEGMHEDAVRLFDEMPGAE-IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY +++    K G  E A  + D M   G   ++     ++ G C +  V  A  L K+
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +  +   K+ Y +L+    +   T++A  L  +M   GL P     + ++      ++
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            K++   F+E   +GL P   TY ++I  + +   +  A+  F RM + G  P   TY +
Sbjct: 383 WKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNS 441

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L+ G CK+  +DEA + Y  M  +G  P  VT +TL   Y  + D   A  +L+ + K+ 
Sbjct: 442 LLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM-KQN 500

Query: 608 WIR----TVNTLIRKLCSEKRV 625
            +     T N LI  +C   RV
Sbjct: 501 GVSCNDYTYNVLINGICMVDRV 522



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 132/347 (38%), Gaps = 72/347 (20%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A +    MV +G  P++ + T L+    +    + A  LF+++ R   Y+ +   + A++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEM-RGRGYRVDAWMFDALM 199

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           S   KE     A  L + M    + P+   Y   I   CK+G+  RA  ++  M + G  
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
              + Y  ++D L K GR++EA  +  +                                
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDE-------------------------------- 287

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI--C-- 515
              M  AG   D+   TTL+  +C ++++  +   F+E +  G+ PTK  Y  +I  C  
Sbjct: 288 ---MRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQ 344

Query: 516 -------------------------------GYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
                                          G L D     AV  F+ M   G  PD  T
Sbjct: 345 VGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFT 403

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           Y  LI   C+  KL EA   ++ M   G+ P   T  +L   YCK+G
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 39/186 (20%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++ +  +  +KE       M   G+   TST   ++    + G V +A E++ EM
Sbjct: 648 VYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A+G   DA ++  +    CR G                                     
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSG------------------------------------- 730

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A +LLEEM R   +PNV+ + +LI+G  +    ++AFRL  +++     +P+  T
Sbjct: 731 -DIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNM-GIQPDDTT 788

Query: 335 YTAMIS 340
           Y  ++S
Sbjct: 789 YDILVS 794



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 45/109 (41%)

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           +   +  G+ P  ++ T ++    R  +   A+  F  M   G   D   + AL+S   K
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +   ++A + ++ M G  I P +          CK GD   A+ +L  +
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 242/499 (48%), Gaps = 21/499 (4%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYA 207
           F     V  C+V+     G L E   M+  M  +G P   + + N V+    + G    A
Sbjct: 153 FTWNKAVQACVVA-----GDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDA 207

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            ++FDEM  + V  +  +Y  M+  + + G +    R  S ML  G   +  T  +L++ 
Sbjct: 208 VKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C  G  G   +   +L+EM  +   P+ +T+++L DG  + G ++    LF + V+   
Sbjct: 268 LCRAGRMG---ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK-G 323

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            K   +T + +++G CK+ K+++AE +L+ +   GLL  T  Y +LI G+C++G+ E A+
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAF 383

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            +   M      P+   YNA+I+GL K  R+ EA++L+ +  +  +     T+  L+  +
Sbjct: 384 SIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAY 443

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +  + ++   +   M + GL P++ +Y +++ AFC+  K+ E+     +     + P  
Sbjct: 444 GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGA 503

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           + Y ++I  Y+  G+   A    ++M   G  P  +TY  LI GLCKQS++ EA +  +S
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS 563

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-------IRTVNTLIRKLC 620
           +   G++P  ++  TL    C + ++  A+     L+K++W        RT   L   L 
Sbjct: 564 LRNYGLAPDVISYNTLISACCYRSNTDRAL----ELEKEMWKCGIKPSPRTYRMLFSSLG 619

Query: 621 SEKRVGMAALFFHKLLGKD 639
              RV      + ++L KD
Sbjct: 620 GAGRVHEMENLYQQMLDKD 638



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 213/455 (46%), Gaps = 8/455 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     M+    + G L+ GF +  +M  +GL     T N ++   C  G +     V D
Sbjct: 223 HITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLD 282

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM +R +  D  +Y ++   + R G            + +G  +   T ++L+   C   
Sbjct: 283 EMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKD- 341

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A E+L+ +V  G       +  LI+G C+ G  E AF +F ++ +S   +P+ 
Sbjct: 342 --GKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM-KSRLIRPDH 398

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY A+I+G  K E++  A  L+  M++ G+ P+  T+ +LI  + + G  E+ + ++  
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G  PN+ +Y +I++  CK G++ EA  +L   F +++      Y  ++  +++   
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
           T QA  L  +M  +G+ P I  Y  LI   C+Q ++ E+E+        GL P   +Y +
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNT 578

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I       N   A++  + M + G  P   TY  L S L    ++ E    Y+ M+ K 
Sbjct: 579 LISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKD 638

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           + PC      +   Y K G+ +     +E+L K++
Sbjct: 639 VVPCSGIYNIMVDAYAKCGEESK----VEALRKEM 669



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 175/371 (47%), Gaps = 6/371 (1%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    ++ AFELL   V    +P+ +T    +      G  ++A  +  ++       PN
Sbjct: 131 GRHADVRGAFELL---VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPN 187

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             +Y  +I+G  K      A  L + M E+ ++PN  TY ++I GH K G+ E  + L  
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  PN+  YN ++ GLC+ GR+ E   +L +   R++  D  TY+IL   H +  
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +++  L LF   VK G+    +  + L+   C+  K+ ++E+  Q  + +GL  T   Y 
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I GY + G++  A   FQ+M      PD+ITY ALI+GL K  ++ EA      M   
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G++P   T  TL   Y + G      IIL  + +K     + +  +++   C   ++  A
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487

Query: 629 ALFFHKLLGKD 639
                 +  KD
Sbjct: 488 VAILDDMFIKD 498



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 172/372 (46%), Gaps = 4/372 (1%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S+  E    G+ +   T + ++   C+ G +  AEEV   +   G+      Y  ++  
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           YC++G +  A      M  R    D+ T   LI      G    I +A +L+ EM + G 
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL---GKVERITEAHDLVIEMEKNGV 429

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P+V T   LID   + G  EK F + L  ++    KPNV +Y ++++ +CK  K+  A 
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCF-IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            +L+ M  + +LP    Y ++I  + + G+ ++A+ L + M   G  P+I  YN +I GL
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+ ++ EA ELL       L  D I+Y  L+S    ++ T +AL L   M K G+ P  
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSP 608

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y  L ++     ++ E E  +Q+ +   + P    Y  M+  Y + G  S      + 
Sbjct: 609 RTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKE 668

Query: 533 MNQIGCAPDNIT 544
           M+  G A  + T
Sbjct: 669 MSDKGIAVGDYT 680


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 214/457 (46%), Gaps = 7/457 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   +V  M   G      TLN +V   C  G V  A  + D M   G   +  +Y 
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C+ G+   A   L  M +R   LD    +++I   C     GS+  AF L  EM
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD---GSLDNAFNLFNEM 289

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             KG+K ++ T+  LI G C  G  +   +L   +++     PNV T++ +I  + KE K
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGK 348

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A+ LL+ M ++G+ PNT TY SLI G CK    E A  ++DLM  +GC P+I  +N 
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+G CK  R+ +  EL ++   R + A+ +TY  L+    +  + + A  LF  MV   
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + PDI +Y  L+   C   +++++ + F +   + +      Y  +I G      +  A 
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  +   G   D   Y  +IS LC++  L +A   +  M  +G +P E+T   L   +
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588

Query: 588 CKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCS 621
               D+ TA  ++E +    +   + TV  +I  L S
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 216/434 (49%), Gaps = 7/434 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M ++G+     +  +M+  +CR  +++ A   +  ++  G   D      L+   C   
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC--- 169

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A EL++ MV  G KP + T   L++GLC  G    A  L  ++V +  ++PN 
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNE 228

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +++  CK  +   A  LL +M+E+ +  +   Y+ +I G CK G+ + A++L + 
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G   +I  YN +I G C  GR  +  +LL+   +R++  + +T+++L+   +K+ +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++A  L   M++ G+ P+   Y +LI  FC++ +++E+ +     I+ G  P   T+  
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   I   ++ F+ M+  G   + +TY  L+ G C+  KL+ A + ++ M+ + 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
           + P  V+   L    C  G+   A+ I   ++K   +L I     +I  +C+  +V  A 
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528

Query: 630 LFFHKLLGKDQNVD 643
             F  L  K   +D
Sbjct: 529 DLFCSLPLKGVKLD 542



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 226/480 (47%), Gaps = 12/480 (2%)

Query: 163 FAEIGRLKEGFSMVI----EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ I + K+ + +V+    +M + G+     TL+ ++   C    + YA     ++   G
Sbjct: 95  FSAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   +  ++   C   RV+EA   +  M++ G      TL  L+   C     G + 
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC---LNGKVS 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L++ MV  G++PN  T+  +++ +CK G T  A  L  K+    N K +   Y+ +
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSII 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK+  ++ A  L   M+ +G   +  TY +LI G C  G ++    L+  M K   
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  ++ +ID   K+G+++EA +LLK+  QR +  + ITY  L+    K+   ++A+ 
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+  G +PDI  +  LI  +C+  ++ +  + F+E    G+     TY +++ G+ 
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A K FQ M      PD ++Y  L+ GLC   +L++A + +  +    +     
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             + + +  C       A  +  SL     KL  R  N +I +LC +  +  A + F K+
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 199/437 (45%), Gaps = 5/437 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V+     G++ +   ++  M   G      T   V+ + C+ G    A E+  +M 
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  DA  Y +++   C+ G +  A    + M  +G   D  T   LI  FC+ G   
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG--- 312

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                 +LL +M+++   PNV T +VLID   K+G   +A +L LK +      PN  TY
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL-LKEMMQRGIAPNTITY 371

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            ++I G+CKE ++  A  +++ M  +G  P+  T+  LI G+CK    +   +L   M  
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   N   YN ++ G C+ G+++ A +L ++   R ++ D ++Y ILL       E ++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL +F ++ K+ +  DI  Y  +I   C   K+ ++   F      G+      Y  MI 
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              R  ++S A   F++M + G APD +TY  LI           A +  E M   G  P
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-P 610

Query: 576 CEVTRVTLAYEYCKQGD 592
            +V+ V +       G+
Sbjct: 611 ADVSTVKMVINMLSSGE 627



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 184/371 (49%), Gaps = 4/371 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  KG   ++YT +++I+  C+      AF    K+++   Y+P+   +  +++G 
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL-GYEPDTVIFNTLLNGL 168

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C E +++ A  L++RM E G  P   T  +L+ G C  G    A  L+D M + G  PN 
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++ +CK G+   A ELL+K  +R ++ D + Y+I++    K      A  LF  
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G   DI  Y TLI  FC   +  +  K  ++ I   + P   T++ +I  ++++G 
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A +  + M Q G AP+ ITY +LI G CK+++L+EA Q  + MI KG  P  +T   
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   YCK       + +   +  +  I    T NTL++  C   ++ +A   F +++ + 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 640 QNVDRVSLAAL 650
              D VS   L
Sbjct: 469 VRPDIVSYKIL 479



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 8/364 (2%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  +++S    P V  +  + S   K ++      L ++M+ +G+  +  T + 
Sbjct: 70  DDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      A+  M  + K G  P+   +N +++GLC + RV EA EL+ +  +  
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            +   IT   L++      +   A+ L  RMV+ G  P+   Y  ++   C+  +   + 
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  ++     +      Y+ +I G  +DG++ +A   F  M   G   D ITY  LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRT 611
           C   + D+  +    MI + ISP  VT   L   + K+G    A  ++ E + + +   T
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 612 V--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSD 665
           +  N+LI   C E R+  A      ++ K  + D ++   L N   ++N+      LF +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428

Query: 666 LSQR 669
           +S R
Sbjct: 429 MSLR 432



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/236 (19%), Positives = 109/236 (46%), Gaps = 7/236 (2%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ++Y   LS  L   +   A+ LF  M+++   P +  +  L +A  + K+ +      ++
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + G+  +  T + MI  + R   +S A     ++ ++G  PD + +  L++GLC + +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNT 614
           + EA +  + M+  G  P  +T  TL    C  G  + A+++++ + +  +     T   
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---SNKYALFSDL 666
           ++  +C   +  +A     K+  ++  +D V  + + +  C +    N + LF+++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 245/510 (48%), Gaps = 33/510 (6%)

Query: 67  SMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVAL-----SFFY 121
           S+ L    +   L   P  + L   ++   H   I+   SL    G MV +     SF +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV---GQMVEMGYQPDSFTF 189

Query: 122 WAIGFAKFRH--------FMRLYIV--CATSLISNGNFERAHEVMQCMVSSFAEIGRLKE 171
             +    FRH         +   +V  C   L++ G           +V+   + G +  
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG----------IVVNGLCKRGDIDL 239

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
             S++ +M    +       N ++   C    V  A  +F EM  +G+  +  +Y  ++ 
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C  GR ++A R LS M++R    +  T + LI AF  +G    + +A +L +EM+++ 
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKRS 356

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P+++T++ LI+G C     ++A  +F  ++  D + PNV TY  +I G+CK ++++  
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEG 415

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L   M ++GL+ NT TYT+LI+G  +    + A  +   M  +G  P+I  Y+ ++DG
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LC  G+V+ A  + +   + +++ D  TY I++    K  + +    LFC +   G+ P+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  YTT+++ FCR+   +E++  F+E    G  P   TY ++I  +LRDG+ +++ +  +
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            M       D  T G L++ +    +LD++
Sbjct: 596 EMRSCRFVGDASTIG-LVTNMLHDGRLDKS 624



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  +++ A   L+ M+  G   D  TL  L+  FC  
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC-H 163

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I  A  L+ +MV  G++P+ +T   LI GL +     +A  L  ++V     +P+
Sbjct: 164 GNR--ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPD 220

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +++G CK   ++ A  LL++M++  + P    Y ++I   C   N   A +L  
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  YN++I  LC  GR  +A  LL    +R++  + +T++ L+   +K+ 
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  L+  M+K  ++PDI  Y++LI  FC   ++ E++  F+  I+   FP   TY 
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M+Q G   + +TY  LI G  +  + D A   ++ M+  
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           G+ P  +T   L    C  G   TA+++ E L +      I T N +I  +C   +V
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 213/451 (47%), Gaps = 13/451 (2%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F    R+ +  S+V +M   G    + T N ++           A  + D M 
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
            +G   D  +Y ++V   C+ G +  A   L  M    ++ G ++ N     +I A C+ 
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT----IIDALCN- 268

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
               ++  A  L  EM  KG +PNV T+  LI  LC  G    A RL   ++      PN
Sbjct: 269 --YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPN 325

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           LM  + C PN+  YN +I G CK  RV E  EL ++  QR L  + +TYT L+    +  
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           E   A  +F +MV  G+ PDI  Y+ L+   C   K++ +   F+    + + P   TY 
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI G  + G +      F  ++  G  P+ +TY  ++SG C++   +EA   +  M  +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565

Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
           G  P   T  TL   + + GD +A+A +I E
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 178/357 (49%), Gaps = 4/357 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N+YT+++LI+  C++     A  +  K+++   Y+P++ T  ++++G+
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGF 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C   +++ A  L+ +M E G  P++ T+ +LI+G  +      A  L+D M  +GC P++
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++GLCK+G +  A  LLKK  Q +++   + Y  ++           AL LF  
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+ P++  Y +LI   C   +  ++ +   + I   + P   T++++I  ++++G 
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K +  M +    PD  TY +LI+G C   +LDEA   +E MI K   P  VT  T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           L   +CK       M +   + ++  +    T  TLI      +    A + F +++
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 12/366 (3%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  +V+S  + P++  ++ ++S   K  K +    L E+M+  G+  N  TY+ 
Sbjct: 63  DDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  ++  M K G  P+I   N++++G C   R+ +A  L+ +  +  
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q D  T+  L+    +     +A+ L  RMV  G  PD+  Y  ++   C++  +  + 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              ++     + P    Y ++I       N++ A+  F  M+  G  P+ +TY +LI  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKL 607
           C   +  +A +    MI + I+P  VT   L   + K+G    A      +I  S+D  +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALF 663
           +  T ++LI   C   R+  A   F  ++ KD   + V+   L     ++ +      LF
Sbjct: 362 F--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 664 SDLSQR 669
            ++SQR
Sbjct: 420 REMSQR 425



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 3/310 (0%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K++ A  L   M +    P+   ++ L+    K+  F+    L + M   G + N+Y Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C++ ++  A  +L K  +   + D +T   LL+          A+ L  +MV+ 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  PD   + TLI    R  +  E+       +  G  P   TY  ++ G  + G+I  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +   ++M Q    P  + Y  +I  LC    +++A   +  M  KGI P  VT  +L   
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 587 YCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G  + A  +L + +++K+   + T + LI     E ++  A   + +++ +  + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 644 RVSLAALKNA 653
             + ++L N 
Sbjct: 361 IFTYSSLING 370



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 42/281 (14%)

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           R+    +  Y  +    L   +   A+ LF  MVK+   P I  ++ L++A  +  K   
Sbjct: 40  RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
                ++    G+     TY+ +I  + R   +S A+    +M ++G  PD +T  +L++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159

Query: 551 GLC-----------------------------------KQSKLDEACQFYESMIGKGISP 575
           G C                                   + ++  EA    + M+ KG  P
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
             VT   +    CK+GD   A+ +L+ +++   +  +   NT+I  LC+ K V  A   F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279

Query: 633 HKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLSQR 669
            ++  K    + V+    +  L N    S+   L SD+ +R
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 241/494 (48%), Gaps = 17/494 (3%)

Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEIGRLK 170
           S+V  S F+ AI  A+ + F  +   C   L  NG    AH +  +  M++ F    +  
Sbjct: 87  SLVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTC 140

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
             +S++ ++   G    T+T N ++ G+  E G V  A  + D M   G   D  +Y  +
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVSEAVVLVDRMVENGCQPDVVTYNSI 199

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V   CR G  + A   L  M +R    D  T + +I + C  G    I  A  L +EM  
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG---CIDAAISLFKEMET 256

Query: 290 KGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           KG K +V T+  L+ GLCK G W + A  L LK + S    PNV T+  ++  + KE K+
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L + M  +G+ PN  TY +L+ G+C       A +++DLM +  C+P+I  + ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G C   RV +  ++ +   +R L A+ +TY+IL+    +  + K A  LF  MV  G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD+  Y  L+   C   K++++ + F++   + +      YT++I G  + G +  A  
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F  +   G  P+ +TY  +ISGLCK+  L EA      M   G +P + T  TL   + 
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 589 KQGD-SATAMIILE 601
           + GD +A+A +I E
Sbjct: 555 RDGDLTASAKLIEE 568



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 12/462 (2%)

Query: 163 FAEIGRLKEGFSMVIEMTN----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ I R K+ F++V++       NG+     TLN ++   C      +A  V  ++   G
Sbjct: 95  FSAIARTKQ-FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  ++      G+V+EA   +  M++ G   D  T   ++   C  G      
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG---DTS 210

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL +M  +  K +V+T++ +ID LC+ G  + A  LF K + +   K +V TY ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSL 269

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK  K N   +LL+ M  + ++PN  T+  L+    K G  + A +L   M   G 
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PNI  YN ++DG C + R+ EA  +L    + +   D +T+T L+  +         + 
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  + K GL  +   Y+ L+  FC+  K+K +E+ FQE ++ G+ P   TY  ++ G  
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A++ F+ + +       + Y  +I G+CK  K+++A   + S+  KG+ P  +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
           T   +    CK+G  + A I+L  +++        T NTLIR
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 7/421 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +  +M+  +CR  +   A   L  ++  G   D  T   LI         G +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL---FLEGKV 174

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L++ MV  G +P+V T+  +++G+C+ G T  A  L  K+    N K +V TY+ 
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYST 233

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   C++  ++ A  L + M+ +G+  +  TY SL+ G CK G +     L+  M    
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  +N ++D   K+G++QEA EL K+   R +  + ITY  L+  +  Q    +A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   MV+   +PDI  +T+LI  +C  K++ +  K F+     GL     TY+ ++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A + FQ M   G  PD +TYG L+ GLC   KL++A + +E +    +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V   T+    CK G    A  +  SL     K  + T   +I  LC +  +  A +   K
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 635 L 635
           +
Sbjct: 534 M 534



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 193/374 (51%), Gaps = 8/374 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G ++ A  +F EM  +G+ +   +Y  +V   C+ G+  +    L  M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + R  + +  T  +L+  F  +G    +++A EL +EM+ +G  PN+ T+  L+DG C +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEG---KLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +A  +   +VR +   P++ T+T++I GYC  ++++    +   + ++GL+ N  T
Sbjct: 347 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+ G C+ G  + A +L   M   G  P++  Y  ++DGLC  G++++A E+ +   
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           + ++    + YT ++    K  + + A  LFC +   G+ P++  YT +I+  C++  + 
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD----NITY 545
           E+    ++    G  P   TY ++I  +LRDG+++++ K  + M   G + D     +  
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585

Query: 546 GALISGLCKQSKLD 559
             L+SG   +S LD
Sbjct: 586 DMLLSGELDKSFLD 599



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 4/408 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   +V  M  NG      T N +V   C  G    A ++  +M  R V AD  +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ + CR G +  A      M  +G      T   L+   C  G          LL++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKD 288

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +   PNV T  VL+D   K+G  ++A  L+ +++ +    PN+ TY  ++ GYC + 
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQN 347

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  +L+ M      P+  T+TSLI G+C V   +    +   + K G   N   Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G+++ A EL ++     +  D +TY ILL       + ++AL +F  + K+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++  I  YTT+I   C+  K++++   F      G+ P   TYT MI G  + G++S A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               ++M + G AP++ TY  LI    +   L  + +  E M   G S
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF +++RS    P++  ++   S   + ++ N      ++++  G+  N  T   
Sbjct: 70  DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      AY ++  + K G  P+   +N +I GL  +G+V EA  L+ +  +  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q D +TY  +++   +  +T  AL L  +M +  +  D+  Y+T+I + CR   +  + 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E  T G+  +  TY S++ G  + G  +      + M      P+ IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K+ KL EA + Y+ MI +GISP  +T  TL   YC Q   + A  +L+ + +      I
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T  +LI+  C  KRV      F  +  +    + V+ + L     +S K  L  +L Q 
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 670 IA 671
           + 
Sbjct: 429 MV 430


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 214/477 (44%), Gaps = 54/477 (11%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM-------- 214
             + GR +  + +  EM +NGL     T   ++   C  G +  A+E+FDEM        
Sbjct: 157 LVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPT 216

Query: 215 ------CARGVCAD---------------------ASSYKLMVVAYCRMGRVTEADRWLS 247
                   RG+C+D                       +Y  ++  YC++    +A R   
Sbjct: 217 VIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQ 276

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ML  G + D  T  +LI   C     G +K A  L   M++    PN+  +  LID  C
Sbjct: 277 DMLGEGLVPDVVTFGILIDGLCK---FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYC 333

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G   +A  LFL+L R +   P+V TY+ +I G C   +   A  + E+M ++G+L N+
Sbjct: 334 KVGDVSEAMALFLELERFE-VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANS 392

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY SLI G CK G  ++A ++   M + G  PN+  ++ +IDG CK   +Q A  +  +
Sbjct: 393 VTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSE 452

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + L  D +TYT ++  H K    K+AL L+  M+  G+ P+ +  + L+   C+  K
Sbjct: 453 MVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512

Query: 488 MKESEKFFQEAI----------TAGLFPT---KETYTSMICGYLRDGNISSAVKYFQRMN 534
           + ++ + F E I            G  P+      YT++I G  +DG  S AVK F  M 
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           + G  PD + Y  ++ GL +   +      +  M+  G+ P     V L   Y + G
Sbjct: 573 RYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESG 627



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 199/414 (48%), Gaps = 18/414 (4%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL- 284
           Y  +++  C+M  V EA   LS     GA L      +L+      G        FELL 
Sbjct: 118 YGELIIVLCKMELVEEA---LSMYHKVGAALTIQACNVLLYVLVKTG-------RFELLW 167

Query: 285 ---EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
              EEM+  G  P+V T   LIDG C++G   +A  +F ++ R     P V  YT +I G
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEM-RVKGIVPTVIVYTILIRG 226

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C + K+  AE +   M+E G+ PN  TY +L+ G+CK+ N ++A  L   M  EG  P+
Sbjct: 227 LCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPD 286

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +  +IDGLCK G ++ A  L     +  +  +   Y  L+  + K  +  +A+ LF 
Sbjct: 287 VVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL 346

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            + +  ++PD+  Y+ LI   C   + +E+   F++    G+     TY S+I G  ++G
Sbjct: 347 ELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEG 406

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A++   +M + G  P+ IT+  LI G CK   L  A   Y  M+ K +SP  VT  
Sbjct: 407 KMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYT 466

Query: 582 TLAYEYCKQGDSATAM-IILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFF 632
            +   +CK G    A+ +  + LD  +     T++ L+  LC + ++  A   F
Sbjct: 467 AMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 243/541 (44%), Gaps = 48/541 (8%)

Query: 76  QFHLRSSPPRLNLQ------IDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKF 129
           QF L+S   R+ L       + + SLT +  IT V    N      AL FF  A      
Sbjct: 3   QFPLKSVLVRIGLNGTMLQVVSLSSLTPDSLITTVL---NCRSPWKALEFFNAAPEKNIQ 59

Query: 130 RHFMRLYIVCATSLISNG---------NFERAHEVMQCMVSSFAEIGRLK---------- 170
            +   ++++  + L+S+          N  ++H+       +F+E+ RLK          
Sbjct: 60  LYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYG 119

Query: 171 -------------EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
                        E  SM  ++   G  L     N ++ +  + G  E    +++EM + 
Sbjct: 120 ELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISN 176

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     ++  ++   CR G +  A      M  +G +      T+LI   C       I
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDN---KI 233

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  +   M   G  PNVYT+  L+DG CK    ++A RL+  ++  +   P+V T+  
Sbjct: 234 EEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDML-GEGLVPDVVTFGI 292

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  +M  A  L   M +  + PN   Y SLI  +CKVG+   A  L   + +  
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +P+++ Y+ +I GLC   R +EA  + +K  +  + A+ +TY  L+    K+ +  +AL
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +  +M + G+ P++  ++TLI  +C+ + ++ +   + E +   L P   TYT+MI G+
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G++  A+K +  M   G  P+  T   L+ GLCK  K+ +A + +   I      C 
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 532

Query: 578 V 578
           V
Sbjct: 533 V 533



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 173/417 (41%), Gaps = 52/417 (12%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP- 330
           G  G++ Q   L          P+    TVL    C+  W  KA   F       N  P 
Sbjct: 14  GLNGTMLQVVSL------SSLTPDSLITTVLN---CRSPW--KALEFF-------NAAPE 55

Query: 331 -NVHTYTAMISGYCKEEKMNRAEMLLE------------------------RMKEQGLLP 365
            N+  Y+A+I      + ++ A  LL                         R+K     P
Sbjct: 56  KNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTP 115

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N   Y  LI   CK+   E A   + +  K G    I A N ++  L K GR +  + + 
Sbjct: 116 NV--YGELIIVLCKMELVEEA---LSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIY 170

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++     L    IT+  L+    +Q +  +A  +F  M   G+ P +  YT LI   C  
Sbjct: 171 EEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K++E+E   +     G++P   TY +++ GY +  N   A++ +Q M   G  PD +T+
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LES 602
           G LI GLCK  ++  A   + +MI   ++P      +L   YCK GD + AM +   LE 
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350

Query: 603 LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            +    + T + LIR LCS  R   A   F K+  +    + V+  +L + C +  K
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 39/450 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +  +   FSM+ ++   G    T T N ++   C  G V+ A    D + A G
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALG 168

Query: 219 VCADASSYKLMVVAYCRMGR-----------------------------------VTEAD 243
              D  SY  ++   C++G                                    V +A 
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
              S M+ +    D  T + LI  FC     G +++AF L  EMV K   P+ YT  +L+
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFC---IVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           D LCK+G  + A  + + +++ +   PNV TY++++ GYC   ++N+A+ +L  + + G 
Sbjct: 286 DALCKEGNLKGAKNMLVVMMK-EGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN ++Y ++I G CK+   + A  L + M  +G  P+   YN++IDGLCK GR+  A+E
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWE 404

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+ +       A+  TY  L+    K     QA+ L  ++   G+ PD++ +  LI   C
Sbjct: 405 LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLC 464

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++K ++  FQ+ ++ G      TY  M+ G  ++G    A     +M+  G  PD +
Sbjct: 465 KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAV 524

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGI 573
           TY  LI  L  + + ++A +    MI + +
Sbjct: 525 TYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 206/448 (45%), Gaps = 11/448 (2%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  D  ++ +++  YC M  +  A   ++ +L  G   D  T   LI   C     G 
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLC---LNGK 153

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    + ++  G+  + +++  LI+GLCK G T  A ++ L+ +     K NV  Y 
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQM-LRKIDGKLVKINVVMYN 212

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + +  A  L  +M  + + P+  T+++LIYG C VG  E A+ L   M  +
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK 272

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P+ Y +N ++D LCK+G ++ A  +L    +  +  + +TY+ L+  +    +  +A
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKA 332

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             +   + + G  P+ H+Y T+I  FC+ K + E+   F +    G+ P K TY S+I G
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G IS A +    M+  G   +  TY  LI  LCK   +D+A    + +  +GI P 
Sbjct: 393 LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPD 452

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEKRVGMAALF 631
             T   L Y  CK G    A  + + L  K      W  T N ++  LC E     A   
Sbjct: 453 MYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAW--TYNIMVNGLCKEGLFDEAEAL 510

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNK 659
             K+       D V+   L  A +  ++
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQALFHKDE 538



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L   +   G  P+++T  +LI+  C       AF +  K+++   Y+P+  T+  +I
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKM-GYEPDTITFNTLI 145

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C   K+  A    + +   G   +  +Y +LI G CK+G    A  ++  +  +   
Sbjct: 146 KGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVK 205

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N+  YN IID LCK   V +AYEL  +   +++  D +T++ L+       + ++A GL
Sbjct: 206 INVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGL 265

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  MV   +NPD + +  L+ A C++  +K ++      +  G+ P   TY+S++ GY  
Sbjct: 266 FREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL 325

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              ++ A      ++Q+G AP+  +Y  +I+G CK   +DEA   +  M  KGI+P +VT
Sbjct: 326 VNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385

Query: 580 RVTLAYEYCKQGDSATAMIILESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +L    CK G  + A  +++ +    +   I T N LI  LC    V  A     K+ 
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI- 444

Query: 637 GKDQNV 642
            KDQ +
Sbjct: 445 -KDQGI 449


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 171/652 (26%), Positives = 299/652 (45%), Gaps = 65/652 (9%)

Query: 16  PSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQ 75
           PS +P   + V+RSL     HH F A++K    S   +S +   SL  ++C+ +L   + 
Sbjct: 74  PSDSPLPLISVVRSLL---SHHKF-ADAKSLLVSYIRTSDA---SL--SLCNSLL---HP 121

Query: 76  QFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRL 135
             HL  SPP      DI           +++  +E    VAL  F   I   K +  +  
Sbjct: 122 NLHL--SPPPSKALFDI----------ALSAYLHEGKPHVALQIFQKMIRL-KLKPNL-- 166

Query: 136 YIVCATSLI------SNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFS 174
            + C T LI      S+ +   A EV   MV               + +   G+L++   
Sbjct: 167 -LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225

Query: 175 MVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           M+  M +   +     T N ++    + G +   +E+  +M   G+  +  +Y  +V  Y
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C++G + EA + +  M     + D  T  +LI   C+ G   S+++  EL++ M     +
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG---SMREGLELMDAMKSLKLQ 342

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V T+  LIDG  + G + +A R  ++ + +D  K N  T+   +   CKEEK    E 
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEA-RKLMEQMENDGVKANQVTHNISLKWLCKEEK---REA 398

Query: 354 LLERMKE----QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +  ++KE     G  P+  TY +LI  + KVG+   A ++M  MG++G   N    N I+
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           D LCK+ ++ EA+ LL  A +R    D++TY  L+    ++ + ++AL ++  M K  + 
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P +  + +LI   C   K + + + F E   +GL P   T+ S+I GY ++G +  A ++
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           +    +    PDN T   L++GLCK+   ++A  F+ ++I +      VT  T+   +CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCK 637

Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
                 A  +L  +++K       T N+ I  L  + ++        K  GK
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 29/433 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G ++EG  ++  M +  L     T N ++    ELGL   A ++ ++M   G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD-RGAILDNATLTLLITAFCDKGFRGSI 277
           V A+  ++ + +   C+  +     R +  ++D  G   D  T   LI A+      G +
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK---VGDL 432

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A E++ EM +KG K N  T   ++D LCK+   ++A  L L       +  +  TY  
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL-LNSAHKRGFIVDEVTYGT 491

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+ +EEK+ +A  + + MK+  + P  +T+ SLI G C  G  E A +  D + + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   +N+II G CK+GRV++A+E   ++ +   + D  T  ILL+   K+  T++AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  +++     D   Y T+I+AFC+ KK+KE+     E    GL P + TY S I   
Sbjct: 612 NFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670

Query: 518 LRDGNISSAVKYFQRMN-QIGCAPDN----------------------ITYGALISGLCK 554
           + DG +S   +  ++ + + G    +                      I Y  +I  LC 
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730

Query: 555 QSKLDEACQFYES 567
           + +L E  + Y S
Sbjct: 731 RGRLKEHSRSYTS 743


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 211/403 (52%), Gaps = 5/403 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +V+   + G     F+++ +M    L       N ++   C+   ++ A  +F EM  +G
Sbjct: 841  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            +  +  +Y  ++   C  GR ++A R LS M++R    D  T + LI AF  +G    + 
Sbjct: 901  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLV 957

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +A +L +EMV++   P++ T++ LI+G C     ++A ++F  +V    + P+V TY  +
Sbjct: 958  EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTL 1016

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G+CK +++     +   M ++GL+ NT TY  LI G  + G+ + A ++   M  +G 
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             PNI  YN ++DGLCK G++++A  + +   + +++    TY I++    K  + +    
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            LFC +   G+ PD+ AY T+I+ FCR+   +E++  F+E    G  P    Y ++I   L
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196

Query: 519  RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            RDG+  ++ +  + M   G A D  T G L++ +    +LD++
Sbjct: 1197 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 1238



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 7/417 (1%)

Query: 212  DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            ++M   G+  +  +Y +++  +CR  ++  A   L  M+  G   +  TL+ L+  +C  
Sbjct: 719  EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC-- 776

Query: 272  GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                 I +A  L+++M   G++PN  T   LI GL       +A  L  ++V +   +P+
Sbjct: 777  -HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPD 834

Query: 332  VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            + TY  +++G CK    + A  LL +M++  L P    Y ++I G CK  + + A +L  
Sbjct: 835  LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894

Query: 392  LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
             M  +G  PN+  Y+++I  LC  GR  +A  LL    +R++  D  T++ L+   +K+ 
Sbjct: 895  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954

Query: 452  ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
            +  +A  L+  MVK  ++P I  Y++LI  FC   ++ E+++ F+  ++   FP   TY 
Sbjct: 955  KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 1014

Query: 512  SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++I G+ +   +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  
Sbjct: 1015 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 1074

Query: 572  GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
            G+ P  +T  TL    CK G    AM++ E L +   +  I T N +I  +C   +V
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 1131



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 13/451 (2%)

Query: 156  MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
            +  +++ +    R+ E  ++V +M   G    T T N ++           A  + D M 
Sbjct: 768  LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 827

Query: 216  ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
            A+G   D  +Y ++V   C+ G    A   L+ M    L+ G ++ N     +I   C  
Sbjct: 828  AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT----IIDGLCK- 882

Query: 272  GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                 +  A  L +EM  KG +PNV T++ LI  LC  G    A RL   ++      P+
Sbjct: 883  --YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPD 939

Query: 332  VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            V T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A  + +
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 392  LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
             M  + C P++  YN +I G CK  RV+E  E+ ++  QR L  + +TY IL+    +  
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059

Query: 452  ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
            +   A  +F  MV  G+ P+I  Y TL+   C+  K++++   F+    + + PT  TY 
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119

Query: 512  SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             MI G  + G +      F  ++  G  PD + Y  +ISG C++   +EA   ++ M   
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179

Query: 572  GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
            G  P      TL     + GD  A+A +I E
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKE 1210



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 247/566 (43%), Gaps = 59/566 (10%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E     +  +V+ F    R+ +  S+V +M   G        N ++   C+   V  A 
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           + F E+  +G+  +  +Y  +V   C   R ++A R LS M+ +    +  T + L+ AF
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    + +A EL EEMVR    P++ T++ LI+GLC     ++A ++F  L+ S   
Sbjct: 374 VKNG---KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGC 429

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +V +Y  +I+G+CK +++     L   M ++GL+ NT TY +LI G  + G+ ++A +
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M   G +P+I+ YN ++ GLC  G +++A  + +   +RE+  D +TYT ++    
Sbjct: 490 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 549

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + ++A  LFC +   GL PDI  YTT+++  C +  + E E  + +    GL     
Sbjct: 550 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 609

Query: 509 TYTS-------------MICGYL-----------------------------------RD 520
           T +              + CGY                                    R+
Sbjct: 610 TLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRN 669

Query: 521 G----NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           G     +  AV  F  M +    P  I +  L+S + K +K D      E M   GI   
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 729

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
             T   L   +C++     A+ +L  + K  +   I T+++L+   C  KR+  A     
Sbjct: 730 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 789

Query: 634 KLLGKDQNVDRVSLAALKNACYESNK 659
           ++       + V+   L +  +  NK
Sbjct: 790 QMFVTGYQPNTVTFNTLIHGLFLHNK 815



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T  ++I  FC   F+ S+  A  +L +M++ G++P+  T   L++G C++     A 
Sbjct: 222 DLYTFNIVINCFC-CCFQVSL--ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            L  K+V    YKP++  Y A+I   CK +++N A    + ++ +G+ PN  TYT+L+ G
Sbjct: 279 SLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 337

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C    +  A  L+  M K+  TPN+  Y+A++D   K G+V EA EL ++  +  +  D
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY+ L++         +A  +F  MV  G   D+ +Y TLI  FC+ K++++  K F+
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 457

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    GL     TY ++I G+ + G++  A ++F +M+  G +PD  TY  L+ GLC   
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           +L++A   +E M  + +    VT  T+    CK G    A  +  SL  K     I T  
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 614 TLIRKLCSE 622
           T++  LC++
Sbjct: 578 TMMSGLCTK 586



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            NR++    +L   +    +  +M   G+  D  ++ +++  +C   +V+ A   L  ML
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   D  T+  L+  FC    R  +  A  L+++MV  G+KP++  +  +ID LCK  
Sbjct: 251 KLGYEPDRVTIGSLVNGFCR---RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               AF  F ++ R    +PNV TYTA+++G C   + + A  LL  M ++ + PN  TY
Sbjct: 308 RVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           ++L+    K G    A +L + M +    P+I  Y+++I+GLC   R+ EA ++      
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +   AD ++Y  L++   K    +  + LF  M + GL  +   Y TLI  F +   + +
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 486

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +++FF +    G+ P   TY  ++ G   +G +  A+  F+ M +     D +TY  +I 
Sbjct: 487 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 546

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           G+CK  K++EA   + S+  KG+ P  VT  T+    C +G
Sbjct: 547 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 182/357 (50%), Gaps = 4/357 (1%)

Query: 283  LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
            L E+M   G   N YT+++LI+  C++     A  +  K+++   Y+PN+ T +++++GY
Sbjct: 717  LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGY 775

Query: 343  CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            C  ++++ A  L+++M   G  PNT T+ +LI+G         A  L+D M  +GC P++
Sbjct: 776  CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835

Query: 403  YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
              Y  +++GLCK+G    A+ LL K  Q +L+   + Y  ++    K      AL LF  
Sbjct: 836  VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895

Query: 463  MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
            M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T++++I  ++++G 
Sbjct: 896  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 523  ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
            +  A K +  M +    P  +TY +LI+G C   +LDEA Q +E M+ K   P  VT  T
Sbjct: 956  LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015

Query: 583  LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
            L   +CK       M +   + ++  +    T N LI+ L       MA   F +++
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 231/551 (41%), Gaps = 61/551 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  R+++G  +  EM+  GL   T T N ++    + G V+ A+E F +M   G
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y +++   C  G + +A      M  R   LD  T T +I   C  G    ++
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG---KVE 555

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK-----LVRSD------- 326
           +A+ L   +  KG KP++ T+T ++ GLC KG   +   L+ K     L+++D       
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 615

Query: 327 --------------NYKPNVHTYTAMISGYCK---------------------------E 345
                          Y P++     + SG CK                           E
Sbjct: 616 ITLSAELIKKMLSCGYAPSL--LKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSE 673

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K++ A  L   M +    P+   ++ L+    K+  F+    L + M   G   N Y Y
Sbjct: 674 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + +I+  C++ ++  A  +L K  +   + + +T + LL+ +       +A+ L  +M  
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P+   + TLI       K  E+       +  G  P   TY  ++ G  + G+   
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A     +M Q    P  + Y  +I GLCK   +D+A   ++ M  KGI P  VT  +L  
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 586 EYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             C  G  + A  +L + +++K+   + T + LI     E ++  A   + +++ +  + 
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 643 DRVSLAALKNA 653
             V+ ++L N 
Sbjct: 974 SIVTYSSLING 984



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 47/366 (12%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNV 332
           +  A +L  +MV+    P++     L+  + K    +    L  K+    +R+D Y    
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY---- 224

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +I+ +C   +++ A  +L +M + G  P+  T  SL+ G C+      A  L+D 
Sbjct: 225 -TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P+I AYNAIID LCK  RV +A++     F +E++                  
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD-----FFKEIE------------------ 320

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
                       + G+ P++  YT L+   C   +  ++ +   + I   + P   TY++
Sbjct: 321 ------------RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 368

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++  ++++G +  A + F+ M ++   PD +TY +LI+GLC   ++DEA Q ++ M+ KG
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
                V+  TL   +CK       M +   + ++  +    T NTLI+       V  A 
Sbjct: 429 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488

Query: 630 LFFHKL 635
            FF ++
Sbjct: 489 EFFSQM 494



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 38/245 (15%)

Query: 447 HLKQAETKQALGLFCRMVKA-----------------------------------GLNPD 471
            L+  +   A+ LF  MVK+                                   G+  D
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ +  +I  FC   ++  +     + +  G  P + T  S++ G+ R   +S AV    
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M +IG  PD + Y A+I  LCK  ++++A  F++ +  KGI P  VT   L    C   
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
             + A  +L  + KK     + T + L+       +V  A   F +++    + D V+ +
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402

Query: 649 ALKNA 653
           +L N 
Sbjct: 403 SLING 407


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 5/434 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F ++GRL +      EM +        T N ++   C+ G +    E + EM   G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  +V A+C+ G + +A ++   M   G + +  T T LI A C  G   ++ 
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG---NLS 419

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EM++ G + NV T+T LIDGLC     ++A  LF K+  +    PN+ +Y A+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNAL 478

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K + M+RA  LL  +K +G+ P+   Y + I+G C +   E A  +M+ M + G 
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N   Y  ++D   K G   E   LL +  + +++   +T+ +L+    K     +A+ 
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 459 LFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            F R+    GL  +   +T +I   C+  +++ +   F++ +  GL P +  YTS++ G 
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + GN+  A+    +M +IG   D + Y +L+ GL   ++L +A  F E MIG+GI P E
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718

Query: 578 VTRVTLAYEYCKQG 591
           V  +++  ++ + G
Sbjct: 719 VLCISVLKKHYELG 732



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 257/611 (42%), Gaps = 73/611 (11%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA---------- 164
           +A  FF W++    F+H +  Y + A  L     +  A+ V++ MV S A          
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183

Query: 165 --------------------EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
                               ++G L+E      +M    +   T + N ++    +LG  
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           +  +  F +M   G      +Y +M+   C+ G V  A      M  RG + D  T   +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I  F   G  G +       EEM     +P+V T+  LI+  CK G        F + ++
Sbjct: 304 IDGF---GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE-FYREMK 359

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            +  KPNV +Y+ ++  +CKE  M +A      M+  GL+PN  TYTSLI  +CK+GN  
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A+ L + M + G   N+  Y A+IDGLC   R++EA EL  K     +  +  +Y  L+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
              +K     +AL L   +   G+ PD+  Y T I   C  +K++ ++    E    G+ 
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539

Query: 505 PTKETYTSMICGYLRDGN-----------------------------------ISSAVKY 529
                YT+++  Y + GN                                   +S AV Y
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599

Query: 530 FQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
           F R+ N  G   +   + A+I GLCK ++++ A   +E M+ KG+ P      +L     
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659

Query: 589 KQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           KQG+   A+ + + + +   KL +    +L+  L    ++  A  F  +++G+  + D V
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719

Query: 646 SLAALKNACYE 656
              ++    YE
Sbjct: 720 LCISVLKKHYE 730



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 42/407 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G+L  G     EM  NGL     + + +V   C+ G+++ A + + +M   G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C++G +++A R  + ML  G   +  T T LI   CD      +K
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE---RMK 454

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL  +M   G  PN+ ++  LI G  K    ++A  L L  ++    KP++  Y   
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL-LNELKGRGIKPDLLLYGTF 513

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-- 396
           I G C  EK+  A++++  MKE G+  N+  YT+L+  + K GN      L+D M KE  
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELD 572

Query: 397 -----------------------------------GCTPNIYAYNAIIDGLCKKGRVQEA 421
                                              G   N   + A+IDGLCK  +V+ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L ++  Q+ L  D+  YT L+  + KQ    +AL L  +M + G+  D+ AYT+L+  
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                +++++  F +E I  G+ P +    S++  +   G I  AV+
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 32/342 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +IG L + F +  EM   G+     T   ++   C+   ++ AEE+F +M   G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
           V  + +SY  ++  + +   +  A   L+ +  RG   D       I   C         
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527

Query: 270 ----------------------DKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                 D  F+ G+  +   LL+EM     +  V T  VLIDGL
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK     KA   F ++      + N   +TAMI G CK+ ++  A  L E+M ++GL+P+
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YTSL+ G+ K GN   A  L D M + G   ++ AY +++ GL    ++Q+A   L+
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +     +  D++    +L +H +     +A+ L   ++K  L
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 214/417 (51%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  ++  A   L  M+  G   D  TL+ L+  +C  
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC-H 163

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I +A  L+++MV  G+KP+  T   LI GL       +A  L  ++V +   +P+
Sbjct: 164 GKR--ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPD 220

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +++G CK   ++ A  LL++M++  +  N   Y ++I G CK  + + A+DL +
Sbjct: 221 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN 280

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  P+++ YN++I  LC  GR  +A  LL    +R++  + +T+  L+    K+ 
Sbjct: 281 KMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG 340

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  LF  M++  ++P+I  Y +LI  FC   ++ E+++ F   ++    P   TY 
Sbjct: 341 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 400

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  
Sbjct: 401 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           G+ P  +T   L    CK G    A+++ E L K      I T N +I  +C   +V
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 207/449 (46%), Gaps = 6/449 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ E  ++V +M   G    T T N ++           A  + D M 
Sbjct: 154 LSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFR 274
           ARG   D  +Y  +V   C+ G +  A   L  M ++G I  N  +   +I   C     
Sbjct: 214 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEANVVIYNTIIDGLCK---Y 269

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  AF+L  +M  KG KP+V+T+  LI  LC  G    A RL   ++      PNV T
Sbjct: 270 KHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVT 328

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           + ++I  + KE K+  AE L + M ++ + PN  TY SLI G C     + A  +  LM 
Sbjct: 329 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 388

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            + C P++  YN +I G CK  RV+E  EL ++  QR L  + +TY  L+    +  +  
Sbjct: 389 SKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 448

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +MV  G+ PDI  Y+ L+   C+  K++++   F+    + + P   TY  MI
Sbjct: 449 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMI 508

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  + G +      F  ++  G  P+ I Y  +ISG C++   +EA   +  M   G  
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 568

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
           P      TL     + GD A +  +++ +
Sbjct: 569 PDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 206/394 (52%), Gaps = 4/394 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +    S++ +M    +       N ++   C+   ++ A ++F++M  +G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C  GR ++A R LS M++R    +  T   LI AF  +G    + 
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG---KLI 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   PN+ T+  LI+G C     ++A ++F  +V  D   P+V TY  +
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M ++GL+ NT TY +LI G  + G+ + A  +   M  +G 
Sbjct: 403 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLCK G++++A  + +   + +++ +  TY I++    K  + +    
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWD 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YTT+I+ FCR+   +E++  F+E    G  P    Y ++I   L
Sbjct: 523 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           RDG+ +++ +  + M   G   D  T   +I+ L
Sbjct: 583 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 189/371 (50%), Gaps = 4/371 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N YT+++L++  C++     A  +  K+++   Y+P++ T +++++GY
Sbjct: 103 LGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGY 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++++ A  L+++M E G  P+T T+ +LI+G         A  L+D M   GC P++
Sbjct: 162 CHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           + Y  +++GLCK+G +  A  LLKK  + +++A+ + Y  ++    K      A  LF +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+ PD+  Y +LI+  C   +  ++ +   + I   + P   T+ S+I  + ++G 
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K F  M Q    P+ +TY +LI+G C   +LDEA Q +  M+ K   P  VT  T
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   +CK       M +   + ++  +    T NTLI+ L       MA   F K++   
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 640 QNVDRVSLAAL 650
              D ++ + L
Sbjct: 462 VPPDIITYSIL 472



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 12/366 (3%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF ++V+S  + P++  ++ ++S   K  K +    L E+M+  G+  N  TY+ 
Sbjct: 63  DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+   C+      A  ++  M K G  P+I   +++++G C   R+ EA  L+ +  +  
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D +T+  L+       +  +A+ L  RMV  G  PD+  Y T++   C++  +  + 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              ++     +      Y ++I G  +  ++  A   F +M   G  PD  TY +LIS L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKL 607
           C   +  +A +    MI + I+P  VT  +L   + K+G    A      +I  S+D   
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN- 360

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALF 663
            I T N+LI   C   R+  A   F  ++ KD   D V+   L     ++ +      LF
Sbjct: 361 -IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 664 SDLSQR 669
            ++SQR
Sbjct: 420 REMSQR 425



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 3/312 (0%)

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E K++ A  L   M +    P+   ++ L+    K+  F+    L + M   G   N Y 
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+ +++  C++ ++  A  +L K  +   + D +T + LL+ +       +A+ L  +MV
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  PD   + TLI       K  E+       +  G  P   TY +++ G  + G+I 
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+   ++M +     + + Y  +I GLCK   +D+A   +  M  KGI P   T  +L 
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 585 YEYCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C  G  + A  +L + +++K+   + T N+LI     E ++  A   F +++ +  +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358

Query: 642 VDRVSLAALKNA 653
            + V+  +L N 
Sbjct: 359 PNIVTYNSLING 370



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 42/264 (15%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L + +   A+ LF  MVK+   P I  ++ L++A  +  K        ++    G+    
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ ++  + R   +  A+    +M ++G  PD +T  +L++G C   ++ EA    + 
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 176

Query: 568 MIGKGISPCEVTRVTLAY-----------------------------------EYCKQGD 592
           M+  G  P  VT  TL +                                     CK+GD
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236

Query: 593 SATAMIILESLDK-KLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS--- 646
              A+ +L+ ++K K+    V  NT+I  LC  K +  A   F+K+  K    D  +   
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296

Query: 647 -LAALKNACYESNKYALFSDLSQR 669
            ++ L N    S+   L SD+ +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIER 320


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/583 (26%), Positives = 267/583 (45%), Gaps = 25/583 (4%)

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRH----------FMRLY-----IVC 139
           ++ ++ + V+ S+ +    + ALS+FY    F    H          F+R++     +  
Sbjct: 87  VSEDEVLGVLKSMTD---PIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAA 143

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
               +      R  +    +  + +  G L++  +++ +M   G  L   + N ++ +  
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           + G    A EV+  M + G+     +Y  ++VA  +          L  M D G   +  
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T T+ I      G  G I +A+E+   M  +G  P++ T+TVLID LC  G  E A  LF
Sbjct: 264 TFTICIRVL---GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           +K+ +++ +KP+   Y  ++  +     ++  +    +M+  G +P+  T+T L+   CK
Sbjct: 321 VKM-KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             +F+ A+   D+M K+G  PN++ YN +I GL + GR+++A +LL       +Q    T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y I +    K  ET +A+  F +M   G+ P+I A    + +     +++E++  F    
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   TY  M+  Y + G +  AV     M + GC PD I   +LI  L K  ++D
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLI 616
           EA Q ++ M    +SP  VT  TL     K+G    A+ + ES+ +KK    T+  NTL+
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              C    V +A   F K+   D   D ++   +     + NK
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 210/473 (44%), Gaps = 37/473 (7%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + GL     T    + +    G ++ A E+F  M   G   D  +Y +++ A C  G
Sbjct: 252 EMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++  A      M   G   D      L+  F D G   + K   E   +M   G+ P+V 
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK---EFWSQMEADGYMPDVV 368

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T+L+D LCK    ++AF  F  ++R     PN+HTY  +I G  +  ++  A  LL  
Sbjct: 369 TFTILVDVLCKARDFDEAFATF-DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  G+ P   TY   I    K G   +A +  + M  +G  PNI A NA +  L + GR
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++EA  +     +  L  D +TY +++  + K  +  +A+ L   M++ G  PD+    +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI +  +  ++ E+ + F       L PT  TY +++ G  ++G +  A++ F+ M +  
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C+P+ I++  L+   CK  +++ A + +  M                             
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMT---------------------------- 639

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                +D K  + T NT+I  L  E +V  A  FFH+ L K  + D V++  L
Sbjct: 640 ----VMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTL 687



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 219/511 (42%), Gaps = 70/511 (13%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E + +   M + G      T   ++   C  G +E A+E+F +M A G   D   Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKGFR------- 274
             ++  +   G +     + S M   G + D  T T+L+   C     D+ F        
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRK 395

Query: 275 --------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                               G I+ A +LL  M   G +P  YT+ + ID   K G T K
Sbjct: 396 QGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGK 455

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   F K+ ++    PN+    A +    +  ++  A+ +   ++E GL P++ TY  ++
Sbjct: 456 AVETFEKM-KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMM 514

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + KVG  + A +L+  M + GC P++   N++ID L K GRV EA+++  +    +L 
Sbjct: 515 KCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS 574

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
              +TY  LLS   K+   ++A+ LF  M++   +P+  ++ TL+  FC+  +++ + K 
Sbjct: 575 PTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKM 634

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F +       P   TY ++I G +++  ++ A  +F ++ +    PD++T   L+ GL K
Sbjct: 635 FSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVK 693

Query: 555 ------------------------------------QSKLDEACQFYESMIGKGISPCEV 578
                                               ++++D+A  F E ++  GI   + 
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
             + L    CK      A  I +   KKL I
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 175/372 (47%), Gaps = 5/372 (1%)

Query: 178  EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRM 236
            E+  NG+    S L  +V + C+     YA ++FD+   + G+    +SY  ++     +
Sbjct: 742  ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801

Query: 237  GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
                +A      M + G   D  T  +L+      G  G I + FEL +EM+ +  KP+ 
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV---HGKSGKITELFELYKEMISRRCKPDA 858

Query: 297  YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             T+ ++I  L K    +KA   F  LV SD ++P   TY  +I G  K  ++  A  L E
Sbjct: 859  ITYNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFE 917

Query: 357  RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             M + G  PN   +  LI G+ K+G+ E A  L   M  EG  P++ +Y  ++D LC  G
Sbjct: 918  EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAG 977

Query: 417  RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            RV EA     +     L  D I Y  +++   K    ++AL L+  M   G+ PD++ Y 
Sbjct: 978  RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037

Query: 477  TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +L+        ++++++ ++E   AGL P   TY ++I GY    N   A   ++ M   
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 537  GCAPDNITYGAL 548
            GC P+  TY  L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 229/555 (41%), Gaps = 55/555 (9%)

Query: 162  SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            S AE+GRL+E  +M   +  NGL   + T N ++    ++G V+ A  +  EM   G   
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 222  DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
            D      ++ +  + GRV EA +    M D        T   L++     G  G +++A 
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL---GKEGRVQKAI 597

Query: 282  ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            EL E M+ K   PN  +   L+D  CK    E A ++F K+   D  KP+V TY  +I G
Sbjct: 598  ELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD-CKPDVLTYNTVIYG 656

Query: 342  YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTP 400
              KE K+N A     ++K + + P+  T  +L+ G  K G    A  +  D M +     
Sbjct: 657  LIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRV 715

Query: 401  NIYAYNAIIDGLCKKGRVQEAY----ELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            N   +  ++ G   +  + +A     EL+     RE  +  I    +L +H ++    Q 
Sbjct: 716  NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRE-DSFLIPLVRVLCKHKRELYAYQI 774

Query: 457  LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
               F +  K G++P + +Y  LI         +++   F++    G  P   T+  ++  
Sbjct: 775  FDKFTK--KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV 832

Query: 517  YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            + + G I+   + ++ M    C PD ITY  +IS L K + LD+A  F+  ++     P 
Sbjct: 833  HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 577  EVTRVTLAYEYCKQGDSATAMIILESLDK---------------------------KLWI 609
              T   L     K G    AM + E +                             +L+ 
Sbjct: 893  PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 610  RTVNTLIRK-----------LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            R VN  IR            LC   RV  A  +F++L     + D ++   + N   +S 
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012

Query: 659  K----YALFSDLSQR 669
            +     AL++++  R
Sbjct: 1013 RMEEALALYNEMRNR 1027



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 162/365 (44%), Gaps = 5/365 (1%)

Query: 212  DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCD 270
            +E+   G+C + S    +V   C+  R   A +       +  I    A+   LI    +
Sbjct: 741  EELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
              +    ++A++L ++M   G  P+ +T  +L+    K G   + F L+ +++ S   KP
Sbjct: 801  VHY---TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKP 856

Query: 331  NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
            +  TY  +IS   K   +++A      +      P   TY  LI G  KVG  E A  L 
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 391  DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            + M   GC PN   +N +I+G  K G  + A +L K+     ++ D  +YTIL+      
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                +AL  F  +   GL+PD  AY  +I    + ++M+E+   + E    G+ P   TY
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             S++      G +  A + ++ +   G  PD  TY ALI G       + A   Y++M+ 
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096

Query: 571  KGISP 575
             G +P
Sbjct: 1097 DGCNP 1101



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 28/281 (9%)

Query: 93   DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            D++T+     V++SLA       AL FFY  +  + FR   R Y                
Sbjct: 857  DAITYN---IVISSLAKSNNLDKALDFFYDLVS-SDFRPTPRTY---------------- 896

Query: 153  HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
                  ++   A++GRL+E   +  EM++ G     +  N ++    ++G  E A ++F 
Sbjct: 897  ----GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 213  EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
             M   G+  D  SY ++V   C  GRV EA  + + +   G   D      +I      G
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL---G 1009

Query: 273  FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                +++A  L  EM  +G  P++YT+  L+  L   G  E+A R++ +L  +   +P+V
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA-GLEPDV 1068

Query: 333  HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
             TY A+I GY   E    A  + + M   G  PN  TY  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 215/455 (47%), Gaps = 33/455 (7%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G      T N ++   C    V+ A ++FD+M  RG   D  SY  ++   C  GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 239 VTEA----------DRWLSAMLDRGAILDNATL----TLLITAFCDKGFRGSI------- 277
           + EA          D  + A L +G  L NA       L++    + G+R S        
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKG--LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 118

Query: 278 ---------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                    K+A E+L+EM  KG  P V T T +I+  CK+G    A R+ L+L++    
Sbjct: 119 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV-LELMKLRGC 177

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KPNV TY A++ G+C E K+++A  LL +M+  G+ P+  TY  LI G C  G+ E A+ 
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+ LM  +G   + Y YNA+I+ LCK GR  +A  L      R ++ + +T+  L++   
Sbjct: 238 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 297

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  +   A     +MV AG  PD + Y++ I   C+ K  +E   F  E +   + P+  
Sbjct: 298 KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 357

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT +I   L++ N     + +  M   GC PD +TY   +   C + +L+EA      M
Sbjct: 358 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
              G++   +   TL   +   G +  A+ IL+ +
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 452



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 219/451 (48%), Gaps = 11/451 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V       R +EG  M+  M   G    T     VV   C     + AEE+  EM  +G
Sbjct: 82  LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 141

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +   ++ AYC+ GR+++A R L  M  RG   +  T   L+  FC++G    + 
Sbjct: 142 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG---KVH 198

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL +M   G  P+  T+ +LI G C  G  E AFRL L+L+  D    + +TY A+
Sbjct: 199 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNAL 257

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  CK+ + ++A  L + ++ +G+ PN  T+ SLI G CK G  + A+  ++ M   GC
Sbjct: 258 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 317

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+ Y Y++ I+ LCK    QE    + +  Q++++   + YTI++ + LK+        
Sbjct: 318 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 377

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV +G NPD+  YTT + A+C + ++ E+E    E    G+      Y +++ G+ 
Sbjct: 378 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 437

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G    AV   ++M  +   P+  TY  L+  L +   +++      + + K I   E+
Sbjct: 438 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI---EL 494

Query: 579 TRVTLAYEYCKQGD----SATAMIILESLDK 605
           T V   ++  K+ +    S T   ILE   +
Sbjct: 495 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 525



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 201/496 (40%), Gaps = 58/496 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++ + GR+ +   ++  M   G      T N +V   C  G V  A  + ++M A G
Sbjct: 152 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 211

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA +Y L++   C  G +  A R L  M   G I D  T   LI A C  G      
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG---RTD 268

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  L + +  +G KPN  T   LI+GLCK G  + A++   K+V S    P+ +TY++ 
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV-SAGCTPDTYTYSSF 327

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK +        +  M ++ + P+T  YT +I+   K  N+         M   GC
Sbjct: 328 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 387

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y   +   C +GR+ EA  +L +  +  +  D + Y  L+  H    +T  A+ 
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 447

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES--------EKFFQEAITAGLF------ 504
           +  +M      P+   Y  L+    R + +++          K  +     GLF      
Sbjct: 448 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 507

Query: 505 ---PTKETYTSMICGYLRDGNISSAVKYFQRMN--------------------------- 534
              P   TY+S++ G+  DG    A      M                            
Sbjct: 508 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 567

Query: 535 --------QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
                   Q G  P  ++Y  L+SGL  + + D+A + + +   K  SP E+    +   
Sbjct: 568 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 627

Query: 587 YCKQG--DSATAMIIL 600
             K+G  D +  MII+
Sbjct: 628 LIKKGHSDISREMIIM 643



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 138/327 (42%), Gaps = 23/327 (7%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA--EEVFDEMCARGVCADASSYK 227
           +EG S + EM    +    ST+N  + I   L    Y      + EM + G   D  +Y 
Sbjct: 338 QEGLSFIGEMLQKDVK--PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 395

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
             + AYC  GR+ EA+  L  M   G  +D      L+      G       A  +L++M
Sbjct: 396 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG---QTDHAVSILKQM 452

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL----------------FLKLVRSDNYKPN 331
                 PN +T+ +L+  L +    E    L                   +++ + + PN
Sbjct: 453 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 512

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY++++ G+ ++ +   A  L+  MKE  +  N + YT+L+   CK   +  A+ L+ 
Sbjct: 513 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 572

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P + +Y  ++ GL  +G+  +A E+   +  ++   D+I + +++   +K+ 
Sbjct: 573 SMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 632

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +  +  +   + +    P    Y  L
Sbjct: 633 HSDISREMIIMLERMNCRPSHQTYAML 659


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 225/441 (51%), Gaps = 12/441 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ F++ GR  +   ++  M   G+     + N ++   C+L     AEE+  +M +RG
Sbjct: 16  LVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75

Query: 219 --VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
                D  +Y  ++  YC+ G+V E+   L  ++ RG   D    T ++ + C K  R  
Sbjct: 76  GRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC-KSAR-- 132

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A ELLEEM+R G  P + T   LI G C++   E A  L L+ + +   K +V TY 
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL-LQTMAASGVKADVVTYN 191

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G CK  ++  AE LLERMK  G  P+   Y+S +YG CK G    A+ +++ M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-AFQRELQADKITYTILLSEHLKQAETKQ 455
              PN+  YN I+DGLCK G++  A E++++ A       + + Y+ ++    K   T++
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +   M +AG  PD+  Y++L+   C+  K++E+ +  +E    G  P   TY S++ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 516 GYLRDGNISSAVKYFQRMNQIG-----CAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           G    G ++ A +  + M+  G     C P   TY ALI GLCK  ++D+A +F++ M  
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 571 KGISPCEVTRVTLAYEYCKQG 591
           +G  P  V+  T+     + G
Sbjct: 432 QGCDPDGVSYSTIVEGLARSG 452



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 231/475 (48%), Gaps = 34/475 (7%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   G P  + T N +V    + G     E + + M ARG+  +  SY  ++   C++ R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 239 VTEADRWLSAMLDRG--AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
             EA+  +  M+ RG  +  D  T + L++ +C  G    ++++ ELL+E++ +G +P+ 
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAG---KVEESRELLKEVISRGLRPDA 117

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             +T ++  LCK     +A  L  +++R+    P + T+  +ISG C+E+ +  A+ LL+
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRA-GCCPTLITFNTLISGCCREKNLEMADSLLQ 176

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G+  +  TY +L+ G CK G  + A  L++ M   GC P++ AY++ + GLCK G
Sbjct: 177 TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAY 475
           +V  A+++L++    +   + +TY  +L    K  +   AL +  +M  + G   ++  Y
Sbjct: 237 KVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           +T++   C+  + +E+    +    AG  P   TY+S++ G  + G I  AV+  + M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            GC P+ +TY +L+ GLC   +L EA +  E          E++      ++C       
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVE----------EMSSGGGGGDHCPPS---- 402

Query: 596 AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                        + T N LI  LC   R+  A  FF ++  +  + D VS + +
Sbjct: 403 -------------VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G VE + E+  E+ +RG+  DA  Y  ++ + C+  R+ EA   L  M+  G     
Sbjct: 93  CKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTL 152

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI+  C +    +++ A  LL+ M   G K +V T+  L+DGLCK G  ++A +L
Sbjct: 153 ITFNTLISGCCREK---NLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L+ +++    P+V  Y++ + G CK  K+  A  +LE+M++    PN  TY +++ G C
Sbjct: 210 -LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLC 268

Query: 379 KVGNFERAYDLMDLMGK-EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           K G  + A ++M+ M   +GC  N+  Y+ ++DGLCK GR QEA  +++   +   + D 
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY+ L++   K  + ++A+     M   G  P+   Y +L+   C   ++ E+E+  +E
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 498 AITAGLF-----PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             + G       P+  TY ++I G  + G I  A+K+FQRM   GC PD ++Y  ++ GL
Sbjct: 389 MSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448

Query: 553 CKQSK 557
            +  +
Sbjct: 449 ARSGR 453



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 172/336 (51%), Gaps = 6/336 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  T+ A+++G+ K+ +    E LLE M  +G+ PN  +Y  L+ G CK+  +  A +L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 390 M-DLMGKEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           + D++ + G  TP++  Y+ ++ G CK G+V+E+ ELLK+   R L+ D + YT +++  
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K A   +AL L   M++AG  P +  + TLI+  CR+K ++ ++   Q    +G+    
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY +++ G  + G +  A +  +RM   GCAPD + Y + + GLCK  K+  A Q  E 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK----LWIRTVNTLIRKLCSEK 623
           M      P  VT  T+    CK G   TA+ ++E +       L +   +T++  LC   
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           R   A      +       D V+ ++L N   ++ K
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 69/280 (24%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + GC PN   +NA+++G  K+GR  +   LL+                          
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLET------------------------- 35

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE--TY 510
                     M   G+ P++ +Y  L+   C+ ++  E+E+  ++ I+ G   T +  TY
Sbjct: 36  ----------MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTY 85

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           ++++ GY + G +  + +  + +   G  PD + Y  +++ LCK ++L EA +  E MI 
Sbjct: 86  STLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIR 145

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
            G  P                                 + T NTLI   C EK + MA  
Sbjct: 146 AGCCP--------------------------------TLITFNTLISGCCREKNLEMADS 173

Query: 631 FFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
               +       D V+   L +   ++ +      L +R+
Sbjct: 174 LLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 219/478 (45%), Gaps = 9/478 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +    GR+ +  +++ EM   G   I    + ++  AC  G    A  V +++ ARG
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +  L++ A C  G V EA   L  +   G   D  +   ++   C     G ++
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              EL+EEMVR    PN+ T   LI  LC+ G  E+   +  ++V      P++  Y  +
Sbjct: 248 ---ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH-GCTPDIRMYATI 303

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CKE  +  A  +L RM   GL PN   Y +L+ G C    +E   +L+  M  + C
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +   +N ++D  C+ G V    ELL++  +R    D ITYT +++   K+    +A+ 
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G  P+  +YT ++   C  ++  ++E    + I  G      T+ ++I    
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A++  ++M   GC+PD I+Y  +I GL K  K DEA +    M+ KG+SP  +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGMAALFF 632
              ++A    ++G     + + +++ +   IR+     N +I  LC       A  F 
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNI-QDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 233/502 (46%), Gaps = 14/502 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+ +   G+L+    +   +    +P    T   VV   C  G +  A  V DEM  RG
Sbjct: 96  MVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                  Y +++ A CR G    A R L  +  RG  LD     L++ A CD+G   S+ 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG---SVD 209

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL ++   G +P+V ++  ++ GLC          L  ++VR     PN+ T+  +
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM-ACPPNIVTFNTL 268

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C+     R   +L +M E G  P+   Y ++I G CK G+ E A+++++ M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN ++ GLC   R +E  ELL + F ++   D +T+ IL+    +     + + 
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  PD+  YTT+I  FC++  + E+    +     G  P   +YT ++ G  
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
                  A     +M Q GC  + IT+  LI+ LCK+  +++A +  + M+  G SP  +
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 579 TRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
           +  T+     K G +  A+ +L  + +K +   T+  +++   L  E R+      F  +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 636 LGKDQNVDRVSLAALKNACYES 657
               Q+    S A L NA   S
Sbjct: 569 ----QDTTIRSDAVLYNAVISS 586



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 201/405 (49%), Gaps = 28/405 (6%)

Query: 137 IVCATSLIS----NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           IV   +LIS    NG FER HEV+  MV         + G +  I M             
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMV---------EHGCTPDIRMYAT---------- 302

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            ++   C+ G +E A E+ + M + G+  +   Y  ++   C   R  E +  L+ M D+
Sbjct: 303 -IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 361

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
              LD+ T  +L+  FC  G    + +  ELLE+M+ +G  P+V T+T +I+G CK+G  
Sbjct: 362 DCPLDDVTFNILVDFFCQNGL---VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++A  + LK + +   KPN  +YT ++ G C  E+   AE L+ +M +QG   N  T+ +
Sbjct: 419 DEAV-MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   CK G  E+A +L+  M   GC+P++ +Y+ +IDGL K G+  EA ELL     + 
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  + I Y+ + S   ++    + + +F  +    +  D   Y  +I++ C++ + + + 
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +F    +++G  P + TYT +I G   +G +  A +    +   G
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 189/415 (45%), Gaps = 10/415 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM   +  +  L E      EM     P    T N ++   C  GL E   EV  +M   
Sbjct: 238 CMAKRWGCVQELME------EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 291

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y  ++   C+ G +  A   L+ M   G   +      L+   C        
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE---RW 348

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++  ELL EM  K    +  T  +L+D  C+ G  ++   L  +++      P+V TYT 
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER-GCMPDVITYTT 407

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CKE  ++ A MLL+ M   G  PNT +YT ++ G C    +  A DLM  M ++G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   +N +I+ LCKKG V++A ELLK+        D I+Y+ ++    K  +T +AL
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   MV  G++P+   Y+++ +A  R+ ++ +  + F       +      Y ++I   
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G    A+++   M   GC P+  TY  LI GL  +  + EA +    +  KG
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 47/472 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G +E A  +     A  V  +A +Y  +V A C  GR+ +A   L  M  
Sbjct: 94  NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 252 RGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           RG         +++ A C   GFR +++    +LE++  +G   +V    ++++ +C +G
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVR----VLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             ++A  L L+ + S   +P+V +Y A++ G C  ++    + L+E M      PN  T+
Sbjct: 207 SVDEALHL-LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI   C+ G FER ++++  M + GCTP+I  Y  IIDG+CK+G ++ A+E+L     
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN---- 321

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                                          RM   GL P++  Y TL+   C  ++ +E
Sbjct: 322 -------------------------------RMPSYGLKPNVVCYNTLLKGLCSAERWEE 350

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +E+   E           T+  ++  + ++G +   ++  ++M + GC PD ITY  +I+
Sbjct: 351 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVIN 410

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           G CK+  +DEA    +SM   G  P  ++   +    C       A  ++  + ++   L
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 470

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T NTLI  LC +  V  A     ++L    + D +S + + +   ++ K
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 185/441 (41%), Gaps = 72/441 (16%)

Query: 229 MVVAYCRMGRVT-------------------------------EADRWLSAMLDRGAILD 257
           ++ + C  GR                                 E+ R L+A +    +  
Sbjct: 64  LIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PVPP 120

Query: 258 NA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           NA T   ++ A C    RG I  A  +L+EM R+G  P    + V+++  C+ G    A 
Sbjct: 121 NAYTYFPVVRALC---ARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 317 RLF-------------------------------LKLVR---SDNYKPNVHTYTAMISGY 342
           R+                                L L+R   S   +P+V +Y A++ G 
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++    + L+E M      PN  T+ +LI   C+ G FER ++++  M + GCTP+I
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  IIDG+CK+G ++ A+E+L +     L+ + + Y  LL         ++   L   
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M       D   +  L+  FC+   +    +  ++ +  G  P   TYT++I G+ ++G 
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGL 417

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           I  AV   + M   GC P+ I+Y  ++ GLC   +  +A      MI +G     +T  T
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L    CK+G    A+ +L+ +
Sbjct: 478 LINFLCKKGLVEQAIELLKQM 498



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 54/345 (15%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVI 177
           +R+Y      +   G+ E AHE++  M S                     R +E   ++ 
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM +   PL   T N +V   C+ GLV+   E+ ++M  RG   D  +Y  ++  +C+ G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416

Query: 238 RVTE-----------------------------ADRWLSA------MLDRGAILDNATLT 262
            + E                             A+RW+ A      M+ +G  L+  T  
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C KG    ++QA ELL++M+  G  P++ +++ +IDGL K G T++A  L L +
Sbjct: 477 TLINFLCKKGL---VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL-LNV 532

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PN   Y+++ S   +E ++N+   + + +++  +  +   Y ++I   CK G 
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            ERA + +  M   GC PN   Y  +I GL  +G V+EA E+L +
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 132/322 (40%), Gaps = 6/322 (1%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y AM++GYC+  ++  A  L   +    + PN  TY  ++   C  G    A  ++D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P    Y+ I++  C+ G  + A  +L+    R    D     ++L+    Q    
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   +   G  PD+ +Y  ++   C  K+    ++  +E +     P   T+ ++I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R+G      +   +M + GC PD   Y  +I G+CK+  L+ A +    M   G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 575 PCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALF 631
           P  V   TL    C       T  ++ E  DK   +   T N L+   C    V      
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
             ++L +    D ++   + N 
Sbjct: 390 LEQMLERGCMPDVITYTTVING 411



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 4/197 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  +   ++ +M   G PL   T N ++   C+ GLVE A E+  +M   G   D  SY 
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 511

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++    + G+  EA   L+ M+++G   +    + + +A   +G    + Q F+ +++ 
Sbjct: 512 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDT 571

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                + +   +  +I  LCK+G TE+A   FL  + S    PN  TYT +I G   E  
Sbjct: 572 T---IRSDAVLYNAVISSLCKRGETERAIE-FLAYMVSSGCVPNESTYTILIRGLASEGF 627

Query: 348 MNRAEMLLERMKEQGLL 364
           +  A+ +L  +  +G L
Sbjct: 628 VKEAQEMLTELCSKGAL 644


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 242/508 (47%), Gaps = 23/508 (4%)

Query: 152 AHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           A +V  C  ++ +    GR  +   ++     +G P+     N +V   C  G ++ A  
Sbjct: 72  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +   M    V  DA +Y  ++   C  GRV +A   L  ML RG   +  T T+L+ A C
Sbjct: 132 LIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 188

Query: 270 -DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            + GF    +QA  +L+EM  KG  PN+ T+ V+I+G+C++G  + A  L  +L  S   
Sbjct: 189 KNSGF----EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLF-SYGC 243

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+  +YT ++ G C  ++ +  E L   M E+  +PN  T+  LI   C+ G  ERA  
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           ++  M +  C  N    N +I+ +CK+GRV +A++ L          D I+YT +L    
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +      A  L   MV+    P+   + T I   C++  ++++    ++    G      
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY +++ G+   G+I SA++ F+ M    C P+ ITY  L++GLC   +LD A +    M
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEM 480

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTL---IRKLCSE 622
           + +   P  VT   L   +C++G    A+ ++E + +      + T NTL   I K CS 
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +    A    H L+ K  + D ++ +++
Sbjct: 541 ED---ALELLHGLVSKGVSPDVITFSSI 565



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 219/508 (43%), Gaps = 83/508 (16%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G    A  V       G   D  +Y  +V  YCR G +  A R + +M       D 
Sbjct: 86  CRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDA 142

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T LI   CD   RG +  A  LL++M+R+G +PNV T+TVL++ +CK    E+A  +
Sbjct: 143 YTYTPLIRVLCD---RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L  +R+    PN+ TY  +I+G C+E +++ A  LL R+   G  P+T +YT+L+ G C
Sbjct: 200 -LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLC 258

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               ++   +L   M ++ C PN   ++ +I   C+ G V+ A ++L++  + E   +  
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
              I+++   KQ     A      M   G NPD  +YTT++   CR ++  ++++  +E 
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM 378

Query: 499 ITAGLFPTKETYTSMIC-----------------------------------GYLRDGNI 523
           +     P + T+ + IC                                   G+   G+I
Sbjct: 379 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD------------------------ 559
            SA++ F+ M    C P+ ITY  L++GLC   +LD                        
Sbjct: 439 DSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVL 495

Query: 560 -----------EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-- 606
                      EA +  E M+  G +P  +T  TL     K   S  A+ +L  L  K  
Sbjct: 496 VNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGV 555

Query: 607 -LWIRTVNTLIRKLCSEKRVGMAALFFH 633
              + T +++I  L  E RV  A   FH
Sbjct: 556 SPDVITFSSIIGILSKEDRVEEAIQMFH 583



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G+VE A +V  +M       + +   +++ + C+ GRV +A ++L+ M
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C +  R +   A ELL+EMVR    PN  T    I  LC+K
Sbjct: 344 GSYGCNPDTISYTTVLKGLC-RAERWN--DAKELLKEMVRNNCPPNEVTFNTFICILCQK 400

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A  + ++ ++       V TY A+++G+C +  ++ A   LE  +     PNT T
Sbjct: 401 GLIEQAI-MLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTIT 456

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M    C PN+  +N +++  C+KG + EA EL+++  
Sbjct: 457 YTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + ITY  L     K   ++ AL L   +V  G++PD+  ++++I    ++ +++
Sbjct: 517 EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVE 576

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ + F  A   G+ P    Y  ++ G  +   I +A+ +   M   GC P+  TY  LI
Sbjct: 577 EAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL ++  L EA      +  +G+
Sbjct: 637 EGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 180/394 (45%), Gaps = 36/394 (9%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF----------------------------- 319
           R G  P+VY  T LI  LC++G T  A R+                              
Sbjct: 68  RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 320 --LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
              +L+ S    P+ +TYT +I   C   ++  A  LL+ M  +G  PN  TYT L+   
Sbjct: 128 AARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 187

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK   FE+A  ++D M  +GCTPNI  YN II+G+C++GRV +A +LL + F    Q D 
Sbjct: 188 CKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDT 247

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ++YT LL              LF  M++    P+   +  LI  FCR   ++ + +  Q+
Sbjct: 248 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQ 307

Query: 498 AITAGLFPTKETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
            +T     T  T  +++   + + G +  A K+   M   GC PD I+Y  ++ GLC+  
Sbjct: 308 -MTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
           + ++A +  + M+     P EVT  T     C++G    A++++E + +    + + T N
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
            L+   C +  +  A   F  +  K   +   +L
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMPCKPNTITYTTL 460



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 198/419 (47%), Gaps = 7/419 (1%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR GR ++A R L A    G+ +D      L+  +C  G    +  A  L+  M      
Sbjct: 86  CRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGH---LDAARRLIGSM---PVA 139

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+ YT+T LI  LC +G    A  L   ++R    +PNV TYT ++   CK     +A  
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVVTYTVLLEAMCKNSGFEQAMA 198

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L+ M+ +G  PN  TY  +I G C+ G  + A DL++ +   GC P+  +Y  ++ GLC
Sbjct: 199 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLC 258

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
              R  +  EL  +  ++    +++T+ +L+    +    ++A+ +  +M +     +  
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
               +I + C+Q ++ ++ KF     + G  P   +YT+++ G  R    + A +  + M
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM 378

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            +  C P+ +T+   I  LC++  +++A    E M   G +   VT   L   +C QG  
Sbjct: 379 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438

Query: 594 ATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +A+ +  S+  K    T  TL+  LC+ +R+  AA    ++L +D   + V+   L N
Sbjct: 439 DSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/489 (22%), Positives = 221/489 (45%), Gaps = 52/489 (10%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
            ++  +++ EM   G      T N ++   C  G V+ A ++ + + + G   D  SY  
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++   C   R  + +   + M+++  + +  T  +LI  FC  G    +++A ++L++M 
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGM---VERAIQVLQQMT 309

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
                 N     ++I+ +CK+G  + AF+ FL  + S    P+  +YT ++ G C+ E+ 
Sbjct: 310 EHECATNTTLCNIVINSICKQGRVDDAFK-FLNNMGSYGCNPDTISYTTVLKGLCRAERW 368

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           N A+ LL+ M      PN  T+ + I   C+ G  E+A  L++ M + GCT  +  YNA+
Sbjct: 369 NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNAL 428

Query: 409 IDGLCKKG--------------------------------RVQEAYELLKKAFQRELQAD 436
           ++G C +G                                R+  A EL+ +   R+   +
Sbjct: 429 VNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +T+ +L++   ++    +A+ L  +M++ G  P++  Y TL     +    +++ +   
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             ++ G+ P   T++S+I    ++  +  A++ F     IG  P  + Y  ++ GLCK+ 
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRH 608

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
           ++D A  F   M+  G  P E                +T +I++E L ++  ++    L+
Sbjct: 609 EIDNAIDFLAYMVSNGCMPNE----------------STYIILIEGLAREGLLKEAQDLL 652

Query: 617 RKLCSEKRV 625
             LCS   V
Sbjct: 653 SMLCSRGVV 661



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 178/385 (46%), Gaps = 7/385 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G ++    ++ +MT +     T+  N V+   C+ G V+ A +  + M + G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++   CR  R  +A   L  M+      +  T    I   C KG    I+
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL---IE 404

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  L+E+M   G    V T+  L++G C +G  + A  LF    RS   KPN  TYT +
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF----RSMPCKPNTITYTTL 460

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C  E+++ A  L+  M  +   PN  T+  L+   C+ G  + A +L++ M + GC
Sbjct: 461 LTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC 520

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  YN + DG+ K    ++A ELL     + +  D IT++ ++    K+   ++A+ 
Sbjct: 521 TPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQ 580

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F      G+ P    Y  ++   C++ ++  +  F    ++ G  P + TY  +I G  
Sbjct: 581 MFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLA 640

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNI 543
           R+G +  A      +   G    N+
Sbjct: 641 REGLLKEAQDLLSMLCSRGVVSKNL 665



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 140/335 (41%), Gaps = 10/335 (2%)

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE-RMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           S N  PN    +A +      E +  A  L+E      G  P+    T LI   C+ G  
Sbjct: 34  SPNVAPN--PASARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRT 91

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  ++      G   +++AYN ++ G C+ G +  A  L+       +  D  TYT L
Sbjct: 92  SDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPL 148

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +     +     AL L   M++ G  P++  YT L+ A C+    +++     E    G 
Sbjct: 149 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY  +I G  R+G +  A     R+   GC PD ++Y  L+ GLC   + D+  +
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEE 268

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
            +  M+ K   P EVT   L   +C+ G    A+ +L+ + +          N +I  +C
Sbjct: 269 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSIC 328

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVS-LAALKNAC 654
            + RV  A  F + +     N D +S    LK  C
Sbjct: 329 KQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 234/497 (47%), Gaps = 22/497 (4%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++ F + G  +    ++ EM   GL +     N V+    + GLV  A E    
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRR 331

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D ++Y  M+   C+ GR+ EAD +L    +RG + +  + T L+ A+C    
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCK--- 388

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           +G   +A  +L  +   G KP++ ++   I G+   G  + A  +  K++    + P+  
Sbjct: 389 QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVF-PDAQ 447

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK  +    ++LL  M ++ + P+   + +L+ G  + G  + A  +  ++
Sbjct: 448 IYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVI 507

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P I  YNA+I G CK G++ +A   L K        D+ TY+ ++  ++KQ + 
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL +F +M+K    P++  YT+LI  FC++  M  +EK F+   +  L P   TYT++
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTL 627

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G+ + G    A   F+ M   GC P++ T+  LI+GL   +      +  +SM     
Sbjct: 628 VGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSM----- 682

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
              E  R +L  ++         M++ E  D+   I   N++I  LC    V  A L   
Sbjct: 683 ---ENER-SLILDFF-------TMMLSEGWDQ--VIAAYNSVIVCLCKHGMVDTAQLLLT 729

Query: 634 KLLGKDQNVDRVSLAAL 650
           K+L K   +D V   A+
Sbjct: 730 KMLTKGFLIDSVCFTAM 746



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 273/633 (43%), Gaps = 119/633 (18%)

Query: 81  SSPPRLN-LQIDIDSL--THE----------QAITVVASLANEAGSMV-----ALSFFYW 122
           S PPR+N L  D+  +  TH+          ++  VV+ +A+     V     AL FF W
Sbjct: 20  SLPPRINYLVSDVIRILKTHQWQDSLESRFAESKVVVSDVAHFVIDRVHDAELALKFFDW 79

Query: 123 AIG------------------FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA 164
           A                     A FR F  + +V     +   + +   E    ++ ++ 
Sbjct: 80  ASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLEN--MKAQHLKPTREAFSALILAYG 137

Query: 165 EIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC----AR 217
           E G L      F  V EM +N LP + ++ N ++    + G V+ A +++D+M       
Sbjct: 138 ESGSLDRALQLFHTVREM-HNCLPTVVAS-NSLLNGLVKSGKVDVALQLYDKMLQTDDGT 195

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +  ++V   C +G++ E  R +     +G +       ++I  +C KG    +
Sbjct: 196 GAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKG---DL 252

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL--------------V 323
           + A   L+E+  KG  P V T+  LI+G CK G  E   +L  ++              V
Sbjct: 253 QCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNV 312

Query: 324 RSDNYK--------------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               +K                    P++ TY  MI+  CK  ++  A+  LE+ KE+GL
Sbjct: 313 IDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGL 372

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLM----------DL--------------------- 392
           LPN  +YT L++ +CK G++ +A  ++          DL                     
Sbjct: 373 LPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALM 432

Query: 393 ----MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M ++G  P+   YN ++ GLCK GR      LL +   R +Q D   +  L+   +
Sbjct: 433 VREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFI 492

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +  E  +A+ +F  +++ G++P I  Y  +I  FC+  KM ++     +       P + 
Sbjct: 493 RNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEY 552

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY+++I GY++  ++SSA+K F +M +    P+ ITY +LI+G CK++ +  A + +  M
Sbjct: 553 TYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGM 612

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
               + P  VT  TL   + K G    A  I E
Sbjct: 613 KSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFE 645



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 167/348 (47%), Gaps = 6/348 (1%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A+ + G      Q F  + EM      P V     L++GL K G  + A +L+ K++
Sbjct: 132 LILAYGESGSLDRALQLFHTVREM--HNCLPTVVASNSLLNGLVKSGKVDVALQLYDKML 189

Query: 324 RSDNYKPNV---HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++D+    V   +T + ++ G C   K+     L++    +G +P+   Y  +I G+CK 
Sbjct: 190 QTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKK 249

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G+ + A   +  +  +G  P +  Y A+I+G CK G  +   +LL +   R L  +   +
Sbjct: 250 GDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVF 309

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             ++    K     +A     RM + G  PDI  Y T+I   C+  ++KE+++F ++A  
Sbjct: 310 NNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKE 369

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL P K +YT ++  Y + G+   A     R+ +IG  PD ++YGA I G+    ++D 
Sbjct: 370 RGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDV 429

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL 607
           A    E M+ KG+ P       L    CK G   A  +++ E LD+ +
Sbjct: 430 ALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNV 477



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 172/410 (41%), Gaps = 74/410 (18%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A  V ++M  +GV  DA  Y +++   C+ GR       LS MLDR    D    
Sbjct: 425 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVF 484

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV------------------------- 296
             L+  F      G + +A ++ + ++RKG  P +                         
Sbjct: 485 ATLMDGFIR---NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNK 541

Query: 297 ----------YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
                     YT++ +IDG  K+     A ++F ++++   +KPNV TYT++I+G+CK+ 
Sbjct: 542 MKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH-KFKPNVITYTSLINGFCKKA 600

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M RAE +   MK   L+PN  TYT+L+ G  K G  E+A  + +LM   GC PN   ++
Sbjct: 601 DMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFH 660

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-QAETKQALGLFCRMVK 465
            +I+GL                       +  T  +L+ E    + E    L  F  M+ 
Sbjct: 661 YLINGL----------------------TNTATSPVLIEEKDSMENERSLILDFFTMMLS 698

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G +  I AY ++I   C+   +  ++    + +T G       +T+M+ G    G    
Sbjct: 699 EGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKG---- 754

Query: 526 AVKYFQRMNQIGCAPDNI------TYGALISGLCKQSKLDEACQFYESMI 569
             K  +  N I C  + I       Y   +     Q +L EA    +++I
Sbjct: 755 --KSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-GLFPTKETYTSMICGYLRDGNISSA 526
           L P   A++ LI A+     +  + + F          PT     S++ G ++ G +  A
Sbjct: 122 LKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVA 181

Query: 527 VKYFQRMNQI----GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ + +M Q     G   DN T   ++ GLC   K++E  +  +   GKG  P  V    
Sbjct: 182 LQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNM 241

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLC 620
           +   YCK+GD   A   L+ L  K  + TV T   LI   C
Sbjct: 242 IIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFC 282


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 237/498 (47%), Gaps = 16/498 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  +G+     T N +V   C+   V  A ++ DEM  +G   D  +Y  +V   C++ 
Sbjct: 149 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 208

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ EA   L+AM    A     +   ++ A C + FR  +++ F ++ +MV +G +PNV 
Sbjct: 209 RLDEATEVLAAMPPVAA-----SYNAIVLALC-REFR--MQEVFSVVSDMVGRGLQPNVI 260

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T ++D  CK G    A  +  ++V +    PNV T+TA++ G   + +++ A  +   
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVIT-GCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G  P+T +Y  LI G C VG+ + A  +++ M + GC PN+  Y+ +IDG  K G 
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A  +     +   + + + YT ++    K+    QA  L  +M+     P+   + T
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI + C  +++  +   F E    G  P   TY  +I G  R+GN   A+     M   G
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 499

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
                +TY  ++SGLC+     EA  F   MI +GI P   T   + + YCK+G+   A 
Sbjct: 500 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 559

Query: 598 IILESLD-----KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +L +++     + + + T+  L+ +LC++ ++  A  +  K+L +    + V+   L  
Sbjct: 560 WMLGAMNVVNCHRNILVYTI--LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 617

Query: 653 ACYESNKYALFSDLSQRI 670
             + +      SD  Q I
Sbjct: 618 GVFRNLGCIEPSDFIQHI 635



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 203/456 (44%), Gaps = 44/456 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  +  R+     M+ EM   G P    T   +V + C+L  ++ A EV   M    
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV- 223

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A+SY  +V+A CR  R+ E    +S M+ RG   +  T T ++ AFC     G ++
Sbjct: 224 ----AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA---GELR 276

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L  MV  G  PNV T T L+ GL   G    A  ++  +V ++ + P+  +Y  +
Sbjct: 277 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV-AEGWAPSTVSYNIL 335

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C    +  A  +L  M++ G  PN  TY++LI G  K G+   A  + + M + GC
Sbjct: 336 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 395

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y  ++D  CKK    +A  L+ K        + +T+  L+          +ALG
Sbjct: 396 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALG 455

Query: 459 LFCRMVKAGLNPD-------IHA----------------------------YTTLIAAFC 483
           +F  M + G  P+       IH                             Y T+++  C
Sbjct: 456 VFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC 515

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +  +E+  F  + I  G+ P   T++++I  Y ++G +  A      MN + C  + +
Sbjct: 516 QTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 575

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            Y  L++ LC Q KL +A  +   M+ +GI P  VT
Sbjct: 576 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 611



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 10/434 (2%)

Query: 93  DSLTHEQAITVVASLA--NEA----GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISN 146
           D +T+   ++V+  L   +EA     +M  ++  Y AI  A  R F    +    S +  
Sbjct: 193 DDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVG 252

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
              +        +V +F + G L+   +++  M   G      T   +V    + G V  
Sbjct: 253 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 312

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +++  M A G      SY +++   C +G +  A   L++M   G   +  T + LI 
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 372

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G  G    A  +  +M R G KPNV  +T ++D  CKK    +A  L  K++  +
Sbjct: 373 GFSKAGDLGG---AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL-E 428

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  PN  T+  +I   C   ++ RA  +   M+  G +PN  TY  LI+G  + GN   A
Sbjct: 429 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 488

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++  M   G   ++  YN ++ GLC+    +EA   + K   + +Q +  T++ ++  
Sbjct: 489 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 548

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K+ E + A  +   M     + +I  YT L+A  C Q K+ ++  +  + +  G++P 
Sbjct: 549 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 608

Query: 507 KETYTSMICGYLRD 520
             T+  ++ G  R+
Sbjct: 609 TVTWNVLVRGVFRN 622



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 37/328 (11%)

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN- 401
           C E  +    ++ + M++ G+ PN  TY  L+   C+      A  ++D M ++GC P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 402 -IYA----------------------------YNAIIDGLCKKGRVQEAYELLKKAFQRE 432
             YA                            YNAI+  LC++ R+QE + ++     R 
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           LQ + ITYT ++    K  E + A  +  RMV  G  P++  +T L+       ++ ++ 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             ++  +  G  P+  +Y  +I G    G++  A      M Q GC P+  TY  LI G 
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK-----QGDSATAMIILESLDKKL 607
            K   L  A   +  M   G  P  V    +   +CK     Q  S    ++LE+     
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN- 433

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKL 635
              T NTLIR LC  +RVG A   FH++
Sbjct: 434 -TVTFNTLIRSLCDCRRVGRALGVFHEM 460


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 244/538 (45%), Gaps = 45/538 (8%)

Query: 156  MQCMVSSFAEIGRLKEGFSMV--IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +  +V+++A+ G L +   M   +      LP +T   NR++ +  E    + A +++DE
Sbjct: 910  LGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHC-NRLLKLLVEQRRWDDARKLYDE 968

Query: 214  MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
            M  +   AD  S  ++V   C   RV E  + + A    G I       +LI  +C    
Sbjct: 969  MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCR--- 1025

Query: 274  RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            RG + +   LL EM   G+ P + T+  LI+ L KKG  EK   LFL++ R   + PNV 
Sbjct: 1026 RGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM-RKRGFSPNVQ 1084

Query: 334  -----------------------------------TYTAMISGYCKEEKMNRAEMLLERM 358
                                               T+  +I+G C E  + +AE  L   
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144

Query: 359  KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              + L PN  +YT LI+G C  G    A DL+  M   G TP++  + A+I GL   G+V
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204

Query: 419  QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             EA  + +K  +R++  D   Y +L+S   K+     A  +   M++  + PD   Y TL
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264

Query: 479  IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
            I  F R + + ++ K F+     G+ P   +  +MI GY + G +S A+     M ++GC
Sbjct: 1265 IDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324

Query: 539  APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             PD  TY  +ISG  KQ  L+ A ++   MI +   P  VT  +L   YCK GD+ +A  
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 1384

Query: 599  ILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            +  ++  +     + T   LI  L  + +V  A L+F  +L    + + V+L  L N 
Sbjct: 1385 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1442



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 199/447 (44%), Gaps = 23/447 (5%)

Query: 174  SMVI--EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            +MVI  +M  +G      T N ++   C  G V  AE    E   R +  +  SY  ++ 
Sbjct: 1102 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1161

Query: 232  AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             +C  G +  A   L  M+ RG   D  T   LI         G + +A  + E+M  + 
Sbjct: 1162 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV---VAGKVSEALIVREKMTERQ 1218

Query: 292  WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
              P+V  + VLI GLCKK     A  +  +++   N +P+   Y  +I G+ + E +  A
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFIRSENLGDA 1277

Query: 352  EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
              + E M+ +G+ P+  +  ++I G+C+ G    A   M  M K GC P+ + Y  +I G
Sbjct: 1278 RKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1337

Query: 412  LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
              K+G +  A   L    +R+ + + +TY+ L++ + K  +T  A GLF  M    L+P+
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 1397

Query: 472  IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR------------ 519
            +  YT LI +  ++ K+  +  +F+  +     P   T   ++ G               
Sbjct: 1398 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1457

Query: 520  ----DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                 G  +  V + + +  IG  P N  Y A+I  LC+ + L EA  F   M  KG  P
Sbjct: 1458 TSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVP 1516

Query: 576  CEVTRVTLAYEYCKQGDSATAMIILES 602
              +T ++L Y +C  G S     IL +
Sbjct: 1517 NPITFLSLLYGFCSVGKSVNWRTILPN 1543



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 41/418 (9%)

Query: 243  DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            D  L +M   GA    A L  L+ A+ D G  G   +  E + E  + G  P V     L
Sbjct: 892  DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVRE--QYGSLPEVTHCNRL 949

Query: 303  IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            +  L ++   + A +L+ +++  D+   N  T   ++ G C           LER  E+G
Sbjct: 950  LKLLVEQRRWDDARKLYDEMLGKDSGADNYST-CVLVRGLC-----------LERRVEEG 997

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            L                         L++     GC P++  YN +IDG C++G +    
Sbjct: 998  L------------------------KLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGL 1033

Query: 423  ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             LL +          +TY  L++   K+ + ++   LF  M K G +P++  Y ++I A 
Sbjct: 1034 LLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDAL 1093

Query: 483  CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            C  +   ++    ++   +G  P   T+ ++I G   +G++  A  + +   +    P+ 
Sbjct: 1094 CNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQ 1153

Query: 543  ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            ++Y  LI G C + +L  A      M+G+G +P  VT   L +     G  + A+I+ E 
Sbjct: 1154 LSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREK 1213

Query: 603  LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
            + ++     V   N LI  LC ++ +  A     ++L K+   D    A L +    S
Sbjct: 1214 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 1271



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 54/276 (19%)

Query: 207  AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
            A ++F+ M  +GVC D  S   M+  YC+ G ++EA   +S M   G I D  T T +I+
Sbjct: 1277 ARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1336

Query: 267  AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             +  +G   ++  A   L +M+++  KPNV T++ LI+G CK G T+ A  LF  + +++
Sbjct: 1337 GYAKQG---NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-QAE 1392

Query: 327  NYKPNVHTYTAMISGYCKEEKMNRAEMLLERM---------------------------- 358
               PNV TYT +I    K++K+ RA +  E M                            
Sbjct: 1393 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 1452

Query: 359  ----------KEQGLL------------PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
                       +  LL            P  + Y ++I+  C+      A D  + M K+
Sbjct: 1453 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 1512

Query: 397  GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
            G  PN   + +++ G C  G+      +L   FQ+E
Sbjct: 1513 GYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQE 1548



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 8/290 (2%)

Query: 383  FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY-T 441
            F+   D +  M   G  P      A++      G + +A E+ ++  ++     ++T+  
Sbjct: 888  FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
             LL   ++Q     A  L+  M+      D ++   L+   C +++++E  K  +    A
Sbjct: 948  RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007

Query: 502  GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            G  P    Y  +I GY R G++   +     M   G  P  +TYG+LI+ L K+  L++ 
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067

Query: 562  CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLI 616
               +  M  +G SP      ++    C    +  AM+IL+ +     D    I T NTLI
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPD--IITFNTLI 1125

Query: 617  RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
              LC E  V  A  F  + + ++ N +++S   L +      +  + SDL
Sbjct: 1126 TGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1175



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 36/182 (19%)

Query: 469  NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            +P   A++TL+    R ++    +   Q    AG  PT+    +++  Y   G +  A +
Sbjct: 869  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATE 928

Query: 529  YFQRM-NQIGCAP-----------------------------------DNITYGALISGL 552
              +R+  Q G  P                                   DN +   L+ GL
Sbjct: 929  MCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGL 988

Query: 553  CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            C + +++E  +  E+  G G  P  V    L   YC++GD    +++L  ++   ++ T+
Sbjct: 989  CLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTL 1048

Query: 613  NT 614
             T
Sbjct: 1049 VT 1050


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 242/495 (48%), Gaps = 10/495 (2%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P   +    V G+  E G+ + A ++FDEM  +G+  DA +Y +++   C+  +   A +
Sbjct: 75  PDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L   +      D  T  ++I + C  G      +A ++  EM+  G  P+V  ++ L+D
Sbjct: 134 -LHEKMKGNCKGDVFTYGMIIDSLCKDGM---TTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC+ G  ++A   F K +       +V+TY ++I G  +          L  M ++G  
Sbjct: 190 GLCRFGRLKEALEFF-KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T+T LI G CK G    A  +++LM  +G  P+I  YN +++GLC  G++++A +L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +    R ++ +  +Y IL++ + K  +  +A  LF  M   GL P    Y TLI A C+
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             +++ ++K F E  T G F    TY  ++ G  ++G++  A+  FQ + +    P+   
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +  L+ G+C+  KL+EA + ++ +   G+ P  +    L    C +G  + A+ +L  ++
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 605 KKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR-VSLAALKNACYESNKY 660
           +K  +    T N +I+ L  E  +  A     ++  ++ + D  V+   L  A ++   +
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 548

Query: 661 ALFSDLSQRIAEGIG 675
           A    L   + +G+G
Sbjct: 549 AALVSLPNALQKGVG 563



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 207/443 (46%), Gaps = 44/443 (9%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC-ADASSYKLMVVAYCRM 236
           EMT  GL     T   ++   C+      A ++ ++M  +G C  D  +Y +++ + C+ 
Sbjct: 102 EMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDSLCKD 159

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G  TEA    S M+  G + D    + L+   C     G +K+A E  +EM  +G   +V
Sbjct: 160 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR---FGRLKEALEFFKEMEGRGISADV 216

Query: 297 YTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           YT+  LI GL + G W E  +  FL L+    + P+  T+T +I G CKE K+  A+ +L
Sbjct: 217 YTYNSLIHGLSRAGLWKEVTW--FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           E M  +G  P+  TY +L+ G C VG  E A  L + +   G   N+++YN +I+G CK 
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334

Query: 416 GRVQEAYELLKKAFQRELQADKITYT---------------------------------- 441
            ++ EA+ L ++   + L+   +TY                                   
Sbjct: 335 QKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 394

Query: 442 -ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            +LL    K    ++A+ LF  + K    P+I  ++ L+   CR  K++E+ K F E   
Sbjct: 395 CVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISK 454

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL P    Y  +I G    G +S AVK   +M + GC PD+IT+  +I  L K++++ E
Sbjct: 455 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 514

Query: 561 ACQFYESMIGKGISPCEVTRVTL 583
           A Q  E M  +  SP E     L
Sbjct: 515 AIQLLEEMRNRNFSPDEAVTSML 537



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 173/361 (47%), Gaps = 4/361 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++      GRLKE      EM   G+     T N ++      GL +      + M
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 242

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG   DA ++ +++   C+ G+V EA + L  M  +G   D  T   L+   C     
Sbjct: 243 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLC---LV 299

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G ++ A +L E +  +G K NV+++ +LI+G CK    ++AFRLF ++ R    KP+  T
Sbjct: 300 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM-RPKGLKPSTVT 358

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I   C+  ++  A+ L   M+  G     +TY  L+ G CK G+ E A DL   + 
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K    PNI  ++ ++DG+C+ G+++EA++   +  +  L+ D I Y IL++    +    
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ L  +M + G  PD   +  +I    ++ ++ E+ +  +E       P +   + ++
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538

Query: 515 C 515
           C
Sbjct: 539 C 539



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 4/159 (2%)

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +K G  PD    TTL+     +  + ++ + F E    GLF   +TY  +I G  +    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+K  ++M    C  D  TYG +I  LCK     EA   +  MIG GI P  V   +L
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKL 619
               C+ G    A+   + ++ +     + T N+LI  L
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 226



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%)

Query: 131 HFMRL--YIVCATSLISNGNFERA-----------H----EVMQCMVSSFAEIGRLKEGF 173
            F++L  Y V    L  NG+ E A           H    EV   ++      G+L+E +
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
               E++ NGL   T   N ++   C  G++  A ++  +M  +G   D+ ++ +++   
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +   + EA + L  M +R    D A  ++L+   C   F      A   L   ++KG
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL---CLASFDPQWHAALVSLPNALQKG 561


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 217/447 (48%), Gaps = 17/447 (3%)

Query: 169 LKEGF-----SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
            K+GF      ++ EMT+ G+          +   C    +E AE++F+ M   GV  + 
Sbjct: 244 FKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNL 303

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  M+  YC+ G + +A      +L    + +      L+  FC       +  A  L
Sbjct: 304 YTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR---ELVAARSL 360

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
              MV+ G  PN+Y +  LI G CK G   +A  L L  + S N  P+V TYT +I+G C
Sbjct: 361 FVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGL-LSEMESLNLSPDVFTYTILINGLC 419

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
            EE++  A  L +RMK + + P++ TY SLI+G CK  N E+A DL   M   G  PNI 
Sbjct: 420 TEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNII 479

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            ++ +IDG CK   ++ A  L  +   + +  D +TYT L+  H K+A  K+AL L+  M
Sbjct: 480 TFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDM 539

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE---AITAGLFPTKET-----YTSMIC 515
           ++AG++P+ H +  L+  F ++ ++ ++  F+ E   A T      +       +T +I 
Sbjct: 540 LEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIE 599

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  ++G I  A ++F  M   G  PD  +Y +++    ++ ++ +    +  MI  GI P
Sbjct: 600 GLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILP 659

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILES 602
             +    LA  Y + G   +A  +  S
Sbjct: 660 NLMVNQLLAMFYQENGYLRSACFLTNS 686



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 198/399 (49%), Gaps = 9/399 (2%)

Query: 200 ELGLVEYAEEVFDEM-CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           E+GL E A  V  EM C+     D+ +   ++    R  R          M+ RG + D 
Sbjct: 178 EMGLFEDALWVSREMRCS----PDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDV 233

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              ++L      +GF    ++   LL+EM   G KPNVY +T+ I  LC++   E+A ++
Sbjct: 234 HIYSVLFQCCFKQGFPSKKEK---LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKM 290

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +L++     PN++TY+AMI GYCK   + +A  L + +    LLPN   + +L+ G C
Sbjct: 291 F-ELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFC 349

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      A  L   M K G  PN+Y YN +I G CK G + EA  LL +     L  D  
Sbjct: 350 KARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVF 409

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL++    +    +A  LF RM    + P    Y +LI  FC++  ++++     E 
Sbjct: 410 TYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEM 469

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            ++G+ P   T++++I GY +  NI +A+  +  M   G  PD +TY  LI    K++ +
Sbjct: 470 TSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANM 529

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            EA + Y  M+  GI P + T   L   + K+G  + A+
Sbjct: 530 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAI 568



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 7/372 (1%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           + L+++ +  MG   +A  W+S  + R +    A L +L      + F  S+   ++L  
Sbjct: 169 FSLLIMEFLEMGLFEDA-LWVSREM-RCSPDSKACLAILNGLVRRRRF-DSVWVDYQL-- 223

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+ +G  P+V+ ++VL     K+G+  K  +L L  + S   KPNV+ YT  I   C+E
Sbjct: 224 -MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKL-LDEMTSLGVKPNVYIYTIYIRDLCRE 281

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            KM  AE + E MK  G++PN  TY+++I G+CK GN  +AY L   +      PN+  +
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVF 341

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             ++DG CK   +  A  L     +  +  +   Y  L+    K     +A+GL   M  
Sbjct: 342 GTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMES 401

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             L+PD+  YT LI   C ++++ E+ + FQ      +FP+  TY S+I G+ ++ NI  
Sbjct: 402 LNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK 461

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+     M   G  P+ IT+  LI G CK   +  A   Y  M  KGI P  VT  TL  
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521

Query: 586 EYCKQGDSATAM 597
            + K+ +   A+
Sbjct: 522 AHFKEANMKEAL 533



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 186/364 (51%), Gaps = 8/364 (2%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M +RG+  D   Y ++     + G  ++ ++ L  M   G   +    T+ I   C +  
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCREN- 282

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +++A ++ E M   G  PN+YT++ +IDG CK G   +A+ L+ +++ ++   PNV 
Sbjct: 283 --KMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE-LLPNVV 339

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +  ++ G+CK  ++  A  L   M + G+ PN   Y  LI+G CK GN   A  L+  M
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                +P+++ Y  +I+GLC + R+ EA  L ++     +    +TY  L+    K+   
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           ++AL L   M  +G+ P+I  ++TLI  +C+ + +K +   + E    G+ P   TYT++
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTL 519

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY----ESMI 569
           I  + ++ N+  A++ +  M + G  P++ T+  L+ G  K+ +L +A  FY    ++  
Sbjct: 520 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 570 GKGI 573
           GK I
Sbjct: 580 GKSI 583



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 13/356 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V  F +   L    S+ + M   G+       N ++   C+ G +  A  +  EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            +  +  D  +Y +++   C   R+ EA+R    M +      + T   LI  FC +   
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEY-- 457

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            +I++A +L  EM   G +PN+ T + LIDG CK    + A  L+ ++       P+V T
Sbjct: 458 -NIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT-IKGIVPDVVT 515

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL----- 389
           YT +I  + KE  M  A  L   M E G+ PN +T+  L+ G  K G    A D      
Sbjct: 516 YTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENN 575

Query: 390 MDLMGKEGCTPNIYAY---NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
               GK     + + Y     +I+GLC+ G +  A           +  D  +Y  +L  
Sbjct: 576 QAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKA 635

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           HL++      + L C M+K G+ P++     L+A F ++     S  F   +   G
Sbjct: 636 HLREKRITDTMMLHCDMIKTGILPNLMV-NQLLAMFYQENGYLRSACFLTNSSRLG 690



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 6/270 (2%)

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            ++ LI    ++G FE   D + +  +  C+P+  A  AI++GL ++ R    +   +  
Sbjct: 168 VFSLLIMEFLEMGLFE---DALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLM 224

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
             R L  D   Y++L     KQ    +   L   M   G+ P+++ YT  I   CR+ KM
Sbjct: 225 ISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           +E+EK F+     G+ P   TY++MI GY + GN+  A   ++ +      P+ + +G L
Sbjct: 285 EEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDK 605
           + G CK  +L  A   +  M+  G+ P       L +  CK G+   AM +L   ESL+ 
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
              + T   LI  LC+E+R+  A   F ++
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRM 434


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 162/638 (25%), Positives = 278/638 (43%), Gaps = 90/638 (14%)

Query: 116 ALSFFYWA--IGFA----------------KFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
            L FF+WA  + F+                K+R F  + IV     + N NF+   E + 
Sbjct: 75  GLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLED--MKNRNFKPTLEALN 132

Query: 158 CMVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
            ++  +AE G + +    F MV E+ N   P + +  N ++    + G V+ A E++D+M
Sbjct: 133 SVICVYAEYGFVDKAVKMFYMVCELYN-CFPCVVAN-NSLLNCLVKNGKVDVACELYDKM 190

Query: 215 CARG------VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
             RG      +  D  S  ++V   C +G+V E  + +      G + +     ++I  +
Sbjct: 191 LERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGY 250

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--------- 319
           C KG    +K+A  + EE+  KG+ P + T+  LIDG CK G  +   +L          
Sbjct: 251 CKKG---DLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLN 307

Query: 320 -------------------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
                                    ++++     +P++ TY  +I+  C   ++  AE  
Sbjct: 308 VNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEF 367

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           LER KE+ LLPN  +YT L++ +CK G++  A D++  + + G  P++ +Y A I G   
Sbjct: 368 LERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVA 427

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G +  A  + +K  ++ +  D   Y +L+S   K+     A  L   M+   L PD + 
Sbjct: 428 GGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYM 487

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y TL+  F R  ++ ++ + F+  ++ G+ P    Y  MI G  + G ++ AV Y  +M 
Sbjct: 488 YATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMK 547

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
               APD  T+  +I G  KQ  LD A + +  M+ +   P  V   +L   +CK  D +
Sbjct: 548 IANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMS 607

Query: 595 TAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALF---------------FHKLL 636
            A  +   ++S + +  + T   LI       +   AA F               FH L+
Sbjct: 608 RAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLI 667

Query: 637 GKDQNVDRVSLAALKNACYESNKYALFSD-LSQRIAEG 673
               N+   +L   KN   E N  +L  D  +  I+EG
Sbjct: 668 NGLTNITNTTLLIEKN---EENDRSLILDFFATMISEG 702



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 239/509 (46%), Gaps = 30/509 (5%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    ++  F + G+ +    ++ EM   GL +     N ++    + GLV+ A E+   
Sbjct: 276 ETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRM 335

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D ++Y +++   C  GR+ EA+ +L    +R  + +  + T L+ A+C    
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCK--- 392

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           +G    A ++L ++   G KP++ ++   I G    G  + A  +  K++    + P+  
Sbjct: 393 QGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF-PDAQ 451

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK+ +   A++LL  M +  L P+   Y +L+ G  +    ++A +L +++
Sbjct: 452 IYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P +  YN +I GLCK G++ +A   + K        D+ T++ ++  ++KQ + 
Sbjct: 512 MSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDL 571

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL +F +M+K    P++ AYT+LI  FC+   M  +EK F+   +  L P   TYT +
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G+ + G    A  +F+ M    C P++ T+  LI+GL                     
Sbjct: 632 IGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL--------------------- 670

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAAL 630
               +T  TL  E  ++ D +  +    ++  + W   I T N++I  LC    V  A L
Sbjct: 671 --TNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQL 728

Query: 631 FFHKLLGKDQNVDRVSLAALKNACYESNK 659
              K+L K   +D V  +AL +   ++ K
Sbjct: 729 LQTKMLRKGFLMDSVCFSALLHGLCQTGK 757


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 191/350 (54%), Gaps = 4/350 (1%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           +LD G  L+     +L+  FC +G   +I  A ++ +E+ ++  +P V +   LI+G CK
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEG---NISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  ++ FRL  ++ +S   +P+V TY+A+I+  CKE KM+ A  L + M ++GL+PN  
Sbjct: 288 VGNLDEGFRLKHQMEKS-RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            +T+LI+GH + G  +   +    M  +G  P+I  YN +++G CK G +  A  ++   
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +R L+ DKITYT L+    +  + + AL +   M + G+  D   ++ L+   C++ ++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            ++E+  +E + AG+ P   TYT M+  + + G+  +  K  + M   G  P  +TY  L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           ++GLCK  ++  A    ++M+  G+ P ++T  TL   + +  +S+   I
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI 576



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 207/412 (50%), Gaps = 7/412 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           L+ +   R G+ + +  ++S +  R   +    +  L+  + D GF     Q F L    
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSR-- 197

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            +  +   +     L+D + K   T   +  +++++ +  +  NV+ +  +++ +CKE  
Sbjct: 198 -KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA-GFPLNVYVFNILMNKFCKEGN 255

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A+ + + + ++ L P   ++ +LI G+CKVGN +  + L   M K    P+++ Y+A
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+ LCK+ ++  A+ L  +  +R L  + + +T L+  H +  E       + +M+  G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           L PDI  Y TL+  FC+   +  +       I  GL P K TYT++I G+ R G++ +A+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  + M+Q G   D + + AL+ G+CK+ ++ +A +    M+  GI P +VT   +   +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495

Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
           CK+GD+ T   +L+ +     + +V   N L+  LC   ++  A +    +L
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 193/386 (50%), Gaps = 9/386 (2%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
           GF M  E+ + G PL     N ++   C+ G +  A++VFDE+  R +     S+  ++ 
Sbjct: 226 GFYM--EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            YC++G + E  R    M       D  T + LI A C +     +  A  L +EM ++G
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE---NKMDGAHGLFDEMCKRG 340

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PN    T LI G  + G  +     + K++ S   +P++  Y  +++G+CK   +  A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKML-SKGLQPDIVLYNTLVNGFCKNGDLVAA 399

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +++ M  +GL P+  TYT+LI G C+ G+ E A ++   M + G   +   ++A++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           +CK+GRV +A   L++  +  ++ D +TYT+++    K+ + +    L   M   G  P 
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y  L+   C+  +MK ++      +  G+ P   TY +++ G+ R  N  S+ +Y Q
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN--SSKRYIQ 577

Query: 532 RMNQIGCAPDNITYGALISGLCKQSK 557
           +  +IG   D  +Y ++++ L + SK
Sbjct: 578 K-PEIGIVADLASYKSIVNELDRASK 602



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 176/383 (45%), Gaps = 22/383 (5%)

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ---------------CMVSSFA 164
           FY  I  A F   + ++ +        GN   A +V                  +++ + 
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++G L EGF +  +M  +       T + ++   C+   ++ A  +FDEMC RG+  +  
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            +  ++  + R G +         ML +G   D      L+  FC     G +  A  ++
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN---GDLVAARNIV 403

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           + M+R+G +P+  T+T LIDG C+ G  E A  +  K +  +  + +   ++A++ G CK
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI-RKEMDQNGIELDRVGFSALVCGMCK 462

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E ++  AE  L  M   G+ P+  TYT ++   CK G+ +  + L+  M  +G  P++  
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +++GLCK G+++ A  LL       +  D ITY  LL  H + A + +    + +  
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQKP 579

Query: 465 KAGLNPDIHAYTTLIAAFCRQKK 487
           + G+  D+ +Y +++    R  K
Sbjct: 580 EIGIVADLASYKSIVNELDRASK 602


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 217/439 (49%), Gaps = 8/439 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +L E   ++ +M +        + N ++ + C+ G +  A ++  +M   G+  + +++ 
Sbjct: 63  KLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFN 122

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V  YC++G + EA   +  M     + D  T T LI   C  G    I +AF L +EM
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDG---KIDEAFRLRDEM 179

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                 P+V T+ +LI+G  +   + K F L  ++      KPN  TY  ++  Y KE K
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM-EGKGVKPNAVTYNVVVKWYVKEGK 238

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M+ A   L +M+E G  P+  T+ +L  G+CK G    A+ +MD M ++G   N    N 
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           I+  LC + ++ +AY+LL  A +R    D+++Y  L+  + K  ++      +  M +  
Sbjct: 299 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKE 354

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P I  Y T+I   CR  K  +S     E + +GL P + TY ++I GY R+G +  A 
Sbjct: 355 IIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAF 414

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
            +  +M +    PD  T   L+ GLC +  LD+A + +++ I KG +   VT  T+    
Sbjct: 415 HFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474

Query: 588 CKQGDSATAMIILESLDKK 606
           C++G    A  +L  +++K
Sbjct: 475 CEEGRFEEAFDLLAEMEEK 493



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 222/472 (47%), Gaps = 11/472 (2%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  ++ +F ++   GV  + +++ +++   C   +++EA   +  M       DN +   
Sbjct: 29  VYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNT 88

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           ++   C K   G + +A +LL +M   G  PN  T  +L+ G CK GW ++A  +   + 
Sbjct: 89  ILDVLCKK---GKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R +N  P+V TYT +I G CK+ K++ A  L + M+   LLP+  TY  LI G  +  + 
Sbjct: 146 R-NNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSS 204

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            + ++L+D M  +G  PN   YN ++    K+G++  A   L+K  +     D +T+  L
Sbjct: 205 LKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 264

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            + + K     +A  +   M + GL  +     T++   C ++K+ ++ K    A   G 
Sbjct: 265 SNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 324

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F  + +Y ++I GY + G        +  M +    P  ITYG +I GLC+  K D++  
Sbjct: 325 FVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSID 380

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
               ++  G+ P + T  T+   YC++G    A      + KK +   + T N L+R LC
Sbjct: 381 KCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLC 440

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           +E  +  A   F   + K + +D V+   + +   E  ++    DL   + E
Sbjct: 441 TEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEE 492



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 199/411 (48%), Gaps = 12/411 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L E   ++++M NNGL    +T N +V   C+LG ++ A EV D M    V  D  +Y
Sbjct: 97  GKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTY 156

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF--CDKGFRGSIKQAFELL 284
             ++   C+ G++ EA R    M +   +    T  +LI     C    +G     FEL+
Sbjct: 157 TTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKG-----FELI 211

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM  KG KPN  T+ V++    K+G  + A     K+  S  + P+  T+  + +GYCK
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES-GFSPDCVTFNTLSNGYCK 270

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +++ A  +++ M  +GL  N+ T  ++++  C     + AY L+    K G   +  +
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +I G  K G+     E+ +K    E+    ITY  ++    +  +T Q++     ++
Sbjct: 331 YGTLIMGYFKVGKSXXWDEMKEK----EIIPSIITYGTMIGGLCRSGKTDQSIDKCNELL 386

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           ++GL PD   Y T+I  +CR+ ++ ++  F  + +     P   T   ++ G   +G + 
Sbjct: 387 ESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLD 446

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            A+K F+     G A D +T+  +ISGLC++ + +EA      M  K + P
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGP 497



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 165/334 (49%), Gaps = 1/334 (0%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           TL  LI A      + S+  +  +  ++++ G + N  T  +LI G C +    +A  L 
Sbjct: 12  TLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLI 71

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            K+     +  NV +Y  ++   CK+ K+N A  LL  MK  GL PN NT+  L+ G+CK
Sbjct: 72  GKMKHFSCFPDNV-SYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCK 130

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +G  + A +++D+M +    P++  Y  +I GLCK G++ EA+ L  +    +L    +T
Sbjct: 131 LGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVT 190

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y +L++   + + + +   L   M   G+ P+   Y  ++  + ++ KM  +    ++  
Sbjct: 191 YNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 250

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            +G  P   T+ ++  GY + G +S A +    M++ G   +++T   ++  LC + KLD
Sbjct: 251 ESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD 310

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
           +A +   S   +G    EV+  TL   Y K G S
Sbjct: 311 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS 344



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 203/457 (44%), Gaps = 49/457 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G++ E F +  EM N  L     T N ++    E        E+ DEM  +G
Sbjct: 159 LIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKG 218

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +A +Y ++V  Y + G++  A   L  M + G   D  T   L   +C  G    + 
Sbjct: 219 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAG---RLS 275

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL-------------------- 318
           +AF +++EM RKG K N  T   ++  LC +   + A++L                    
Sbjct: 276 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 335

Query: 319 --FLKLVRSDNYK--------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
             + K+ +S  +         P++ TY  MI G C+  K +++      + E GL+P+  
Sbjct: 336 MGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQT 395

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY ++I G+C+ G  ++A+   + M K+   P+++  N ++ GLC +G + +A +L K  
Sbjct: 396 TYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTW 455

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
             +    D +T+  ++S   ++   ++A  L   M +  L PD + +  +++A     +M
Sbjct: 456 ISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRM 515

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYG 546
           KE+E+F    +                G L+D  IS   +  +  ++      P+++ + 
Sbjct: 516 KEAEEFMSGIVEQ--------------GKLQDQTISLNKRKTESSSETSQESDPNSVAFS 561

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             I+ LC Q K  +A    +    KGI   + T ++L
Sbjct: 562 EQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISL 598



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 176/361 (48%), Gaps = 20/361 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           + + + + GRL E F M+ EM+  GL + + TLN ++   C    ++ A ++      RG
Sbjct: 264 LSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  +++ Y ++G+    D     M ++  I    T   +I   C  G      
Sbjct: 324 YFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEIIPSIITYGTMIGGLCRSG---KTD 376

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q+ +   E++  G  P+  T+  +I G C++G  +KAF    K+V+  ++KP++ T   +
Sbjct: 377 QSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKK-SFKPDLFTCNIL 435

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C E  +++A  L +    +G   +  T+ ++I G C+ G FE A+DL+  M ++  
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y +NAI+  L   GR++EA E +    ++    D+   TI L++   ++ ++ +  
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQ---TISLNKRKTESSSETS-- 550

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                     +P+  A++  I   C Q K K++    QE+   G+   K TY S++ G +
Sbjct: 551 -------QESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLI 603

Query: 519 R 519
           +
Sbjct: 604 K 604



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 146/324 (45%), Gaps = 6/324 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK----PNVHTYTAMISGY 342
           M R   KPN+ T   LI  L +  +  K      K + SD  K     N +T+  +I G 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVR--YPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGC 58

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C E K++ A  L+ +MK     P+  +Y +++   CK G    A DL+  M   G  PN 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             +N ++ G CK G ++EA E++    +  +  D  TYT L+    K  +  +A  L   
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M    L P +  Y  LI          +  +   E    G+ P   TY  ++  Y+++G 
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + +A    ++M + G +PD +T+  L +G CK  +L EA +  + M  KG+    VT  T
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298

Query: 583 LAYEYCKQGDSATAMIILESLDKK 606
           + +  C +     A  +L S  K+
Sbjct: 299 ILHTLCGERKLDDAYKLLSSASKR 322



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 6/200 (3%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCR---QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           M +  L P++    TLI A  R   +  +  S+  F + I  G+     T+  +ICG   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +  +S A+    +M    C PDN++Y  ++  LCK+ KL+EA      M   G+ P   T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 580 RVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L   YCK G   ++A  + I+   +    +RT  TLI  LC + ++  A     ++ 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 637 GKDQNVDRVSLAALKNACYE 656
                   V+   L N C+E
Sbjct: 181 NLKLLPHVVTYNMLINGCFE 200


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 206/425 (48%), Gaps = 5/425 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S   + R+   FS + ++   G     +T   ++   C  G +  A  +FD+M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C+  +VTEA    S M+ +G   +  T   LI   C        K
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWK 202

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               L+ EMV     P+V+T   ++D LCK+G   +A  +   ++     +PNV TY A+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNAL 261

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+C   +++ A  + + M  +  + N  +Y +LI G+CK+ + ++A  L + M ++  
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN   YN +I GLC  GR+Q+A  L  +   R    D +TY  L     K     +A+ 
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   +  +  +PDI  YTT++   CR  +++++   F    + GL P   TY  MI G  
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G ++ A K F  MN+ GC+P++ TY  +  G  + ++     +  E M+ +G S  +V
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS-VDV 500

Query: 579 TRVTL 583
           +  TL
Sbjct: 501 STTTL 505



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S A+        S+  +M + G+P    TL  V+   C L  V++A     ++   G
Sbjct: 51  LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLG 110

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA+++  ++   C  G++ EA      M+  G   +  T   LI   C       + 
Sbjct: 111 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDR---QVT 167

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  EM+ KG  PN+ T+  LI GLCK    +    L  ++V S    P+V T   +
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTV 226

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CKE  +  A  +++ M  +G+ PN  TY +L+ GHC     + A  + D M  + C
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+ +YN +I+G CK   V +A  L ++  ++EL  + +TY  L+         + A+ 
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G  PD+  Y TL    C+ + + ++    +    +   P  + YT+++ G  
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F  ++  G  P+  TY  +I GLCKQ  L EA + +  M   G SP + 
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T   +   + +  ++   + +LE +
Sbjct: 467 TYNLITRGFLRNNEALRTIELLEEM 491



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 209/438 (47%), Gaps = 4/438 (0%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           L E  S    M +   P  T   NR++    +         +  +M + G+  D  +  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++ + C + RV  A   L+ +L  G   D  T T LI   C     G I +A  L ++M+
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC---VEGKIGEALHLFDKMI 142

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            +G++PNV T+  LI+GLCK     +AF +F +++ +    PN+ TY ++I G CK  + 
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSLIHGLCKLCEW 201

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
                L+  M +  ++P+  T  +++   CK G    A+D++D+M   G  PN+  YNA+
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +DG C +  V  A ++      ++  A+ I+Y  L++ + K     +A+ LF  M +  L
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P+   Y TLI   C   +++++   F E +  G  P   TY ++     ++ ++  A+ 
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
             + +      PD   Y  ++ G+C+  +L++A   + ++  KG+ P   T   + +  C
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 589 KQGDSATAMIILESLDKK 606
           KQG  A A  +   ++K 
Sbjct: 442 KQGLLAEASKLFSEMNKN 459



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 155/663 (23%), Positives = 266/663 (40%), Gaps = 57/663 (8%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    + L        L ++ +  H +  P  ++    + S+   +  +
Sbjct: 3   SLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHS 62

Query: 103 VVASLANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMV 160
            + SL+ +  S  +    +  AI      H  R+ +   A + I     +        ++
Sbjct: 63  TLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLI 122

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
                 G++ E   +  +M   G      T   ++   C+   V  A  +F EM  +G+ 
Sbjct: 123 RGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGIS 182

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +  +Y  ++   C++         ++ M+D   + D  TL  ++ A C +G    + +A
Sbjct: 183 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM---VAEA 239

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            ++++ M+ +G +PNV T+  L+DG C +   + A ++F  +V  D    NV +Y  +I+
Sbjct: 240 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA-NVISYNTLIN 298

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYCK + +++A  L E M  Q L PNT TY +LI+G C VG  + A  L   M   G  P
Sbjct: 299 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++  Y  + D LCK   + +A  LLK         D   YT +L    +  E + A  LF
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             +   GL P++  Y  +I   C+Q  + E+ K F E    G  P   TY  +  G+LR+
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISG--------------LCKQSK--------- 557
                 ++  + M   G + D ++   L+ G              LCK S          
Sbjct: 479 NEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQM 537

Query: 558 ------------------------LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                                   LD+A   +  M+     P  V    L     K    
Sbjct: 538 RSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHY 597

Query: 594 ATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           +T + +   ++S      + T+N LI   C  +R+G A     KLL      D V+   L
Sbjct: 598 STVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTL 657

Query: 651 KNA 653
            N 
Sbjct: 658 MNG 660



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 171/342 (50%), Gaps = 17/342 (4%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++SF  + RL   FS++ ++   G      T   ++   C             +M 
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMI 665

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            +G+  D  +Y  ++ A C +         L+ M++   + +    + ++ A C +G   
Sbjct: 666 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM-- 723

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            I  A ++++ M+++G +P+V T+T L+DG C +   ++A ++F  +V      PNV +Y
Sbjct: 724 -IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK-GCVPNVRSY 781

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+GYC+ ++M++A  LLE+M  QGL+ +T TY +LI+G C VG  + A  L   M  
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  Y  ++D LCK   + EA  LLK      L AD + Y I +    +  E + 
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           A  LF  +   GL PD+  Y  +I   C++  + E+ K F++
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 174/364 (47%), Gaps = 19/364 (5%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  P+VYT  +LI+  C       AF +  KL++   ++P+V TY  ++
Sbjct: 600 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL-GFQPDVVTYGTLM 658

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK             M  +G+ P+  TY SLI+  C +  ++    L++ M      
Sbjct: 659 NGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  ++ ++D LCK+G +  A++++    +R ++ D +TYT L+  H  ++E  +A+ +
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  MV  G  P++ +Y  LI  +C+ ++M ++    ++    GL     TY ++I G   
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A+  F  M   G  PD +TY  L+  LCK   L EA    +++ G  +   ++ 
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD-ADIL 884

Query: 580 RVTLAYE-YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
              +A +  C+ G+   A  +  +L  K     +RT N +I  LC    +  A   F K+
Sbjct: 885 VYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944

Query: 636 LGKD 639
              D
Sbjct: 945 DEND 948



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 218/561 (38%), Gaps = 110/561 (19%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++  V+ A  +F+EM  + +  +  +Y  ++   C +GR+ +A      M+ 
Sbjct: 294 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 353

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG I D  T   L    C       + +A  LL+ +    W P++  +T ++DG+C+ G 
Sbjct: 354 RGQIPDLVTYRTLSDYLCKNR---HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 410

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A  LF  L  S   +PNV TY  MI G CK+  +  A  L   M + G  PN  TY 
Sbjct: 411 LEDARDLFSNL-SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK---- 427
            +  G  +     R  +L++ M   G + ++     ++  L   G  Q   ++L K    
Sbjct: 470 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSS 529

Query: 428 --------------------------------------AFQRELQ----ADKITYTILLS 445
                                                 +F R L        + +T LL+
Sbjct: 530 SRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLT 589

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM--------KESEKFFQ- 496
              K       L L  +M   G+ PD++    LI +FC  +++        K  +  FQ 
Sbjct: 590 SIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQP 649

Query: 497 -------------EAITAGLFPTKETYTSMI---CGYLRDGNI----------------- 523
                        + IT G+ P   TY S+I   C      ++                 
Sbjct: 650 DVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 709

Query: 524 --SSAVKYFQRMNQIGCAPDNI-------------TYGALISGLCKQSKLDEACQFYESM 568
             S+ V    +   I  A D +             TY AL+ G C +S++DEA + +++M
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRV 625
           + KG  P   +   L   YC+      AM +LE +  +  I    T NTLI  LC   R+
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 829

Query: 626 GMAALFFHKLLGKDQNVDRVS 646
             A   FH+++   Q  D V+
Sbjct: 830 QHAIALFHEMVASGQIPDLVT 850



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 4/278 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +   K   +++ EM N+ +       + VV   C+ G++  A +V D M  RG
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  +C    + EA +    M+ +G + +  +  +LI  +C       + 
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI---QRMD 795

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LLE+M  +G   +  T+  LI GLC  G  + A  LF ++V S    P++ TY  +
Sbjct: 796 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI-PDLVTYRIL 854

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK   +  A +LL+ ++   L  +   Y   I G C+ G  E A DL   +  +G 
Sbjct: 855 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 914

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            P++  YN +I GLCK+G + EA +L +K  + ++ ++
Sbjct: 915 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 4/247 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V +  + G +     +V  M   G+     T   ++   C    ++ A +VFD M
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G   +  SY +++  YC++ R+ +A   L  M  +G I D  T   LI   C     
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC---HV 826

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G ++ A  L  EMV  G  P++ T+ +L+D LCK     +A  L LK +   N   ++  
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL-LKAIEGSNLDADILV 885

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y   I G C+  ++  A  L   +  +GL P+  TY  +I+G CK G  + A  L   M 
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945

Query: 395 KEGCTPN 401
           +     N
Sbjct: 946 ENDIWSN 952


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 5/434 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  F ++GRL +      EM +        T N ++   C+ G +    E + EM   G
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 230

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  +V A+C+ G + +A ++   M   G + +  T T LI A C  G   ++ 
Sbjct: 231 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG---NLS 287

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L  EM++ G + NV T+T LIDGLC     ++A  LF K+  +    PN+ +Y A+
Sbjct: 288 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNAL 346

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K + M+RA  LL  +K +G+ P+   Y + I+G C +   E A  +M+ M + G 
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N   Y  ++D   K G   E   LL +  + +++   +T+ +L+    K     +A+ 
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 466

Query: 459 LFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            F R+    GL  +   +T +I   C+  +++ +   F++ +  GL P +  YTS++ G 
Sbjct: 467 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 526

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + GN+  A+    +M +IG   D + Y +L+ GL   ++L +A  F E MIG+GI P E
Sbjct: 527 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 586

Query: 578 VTRVTLAYEYCKQG 591
           V  +++  ++ + G
Sbjct: 587 VLCISVLKKHYELG 600



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 204/432 (47%), Gaps = 9/432 (2%)

Query: 209 EVFDEMCA-RGVCADA-SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +VFD + + R VC      +  +      +G + EA +  S M          +   L+ 
Sbjct: 44  DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 103

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G    +K+ F+   +M+  G +P V+T+ ++ID +CK+G  E A  LF ++ +  
Sbjct: 104 RFAKLGKTDDVKRFFK---DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFR 159

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  TY +MI G+ K  +++      E MK+    P+  TY +LI   CK G     
Sbjct: 160 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 219

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +    M   G  PN+ +Y+ ++D  CK+G +Q+A +      +  L  ++ TYT L+  
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K      A  L   M++ G+  ++  YT LI   C  ++MKE+E+ F +  TAG+ P 
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 339

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +Y ++I G+++  N+  A++    +   G  PD + YG  I GLC   K++ A     
Sbjct: 340 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 399

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEK 623
            M   GI    +   TL   Y K G+    + +L+    LD ++ + T   LI  LC  K
Sbjct: 400 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 459

Query: 624 RVGMAALFFHKL 635
            V  A  +F+++
Sbjct: 460 LVSKAVDYFNRI 471



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 42/407 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G+L  G     EM  NGL     + + +V   C+ G+++ A + + +M   G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C++G +++A R  + ML  G   +  T T LI   CD      +K
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE---RMK 322

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL  +M   G  PN+ ++  LI G  K    ++A  L  +L +    KP++  Y   
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTF 381

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-- 396
           I G C  EK+  A++++  MKE G+  N+  YT+L+  + K GN      L+D M KE  
Sbjct: 382 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELD 440

Query: 397 -----------------------------------GCTPNIYAYNAIIDGLCKKGRVQEA 421
                                              G   N   + A+IDGLCK  +V+ A
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L ++  Q+ L  D+  YT L+  + KQ    +AL L  +M + G+  D+ AYT+L+  
Sbjct: 501 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 560

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                +++++  F +E I  G+ P +    S++  +   G I  AV+
Sbjct: 561 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 169/373 (45%), Gaps = 42/373 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  +IG L + F +  EM   G+     T   ++   C+   ++ AEE+F +M   G
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG---AILDNATL-------------- 261
           V  + +SY  ++  + +   +  A   L+ +  RG    +L   T               
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 262 --------------TLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                         +L+ T   D  F+ G+  +   LL+EM     +  V T  VLIDGL
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK     KA   F ++      + N   +TAMI G CK+ ++  A  L E+M ++GL+P+
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              YTSL+ G+ K GN   A  L D M + G   ++ AY +++ GL    ++Q+A   L+
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 575

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL--------NPDIHAYTTL 478
           +     +  D++    +L +H +     +A+ L   ++K  L         P+I++   L
Sbjct: 576 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSDQNL 635

Query: 479 IAAFCRQKKMKES 491
           +++  R+ + +E+
Sbjct: 636 VSS--REHEEQET 646


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 195/364 (53%), Gaps = 4/364 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +    G+  D  +  +++  +C +  +T A    + +L RG   +  TL  LI   C
Sbjct: 83  LFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLC 142

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              F G IK+A    +++V +G++ +  ++  LI+GLCK G T+   RL  KL    + K
Sbjct: 143 ---FCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVK 198

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++  YT +I   CK + +  A  L   M  +G+ PN  TYT+LI+G C +GN + A+ L
Sbjct: 199 PDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSL 258

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M  +   P++Y +N +ID L K+G++ EA  L ++   + +  + +TYT L+    K
Sbjct: 259 LNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCK 318

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               ++A+ L  +M + G+ P++++YT L+ A C+  +++ +++FFQ  +  G      T
Sbjct: 319 NHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT 378

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  MI G  + G     +    +M   GC P+ IT+  +I  L ++ + D+A +F   MI
Sbjct: 379 YNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMI 438

Query: 570 GKGI 573
            +G+
Sbjct: 439 ARGL 442



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 4/349 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +  +   FS+   +   G      TLN ++   C  G ++ A    D++ 
Sbjct: 99  LSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVV 158

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY  ++   C+ G      R L  +       D    T +I   C     G
Sbjct: 159 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLG 218

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A +L  EM+ KG  PNV+T+T LI G C  G  ++AF L L  ++  N  P+V+T+
Sbjct: 219 ---DACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSL-LNEMKLKNINPDVYTF 274

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I    KE K++ A  L E MK + + PN  TYTSLI G CK  + ERA  L   M +
Sbjct: 275 NILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 334

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  PN+Y+Y  ++D LCK GR++ A +  +    +    +  TY ++++   K      
Sbjct: 335 QGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 394

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
            + L  +M   G  P+   + T+I A   + +  ++EKF +E I  GL 
Sbjct: 395 VMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 161/331 (48%), Gaps = 4/331 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   D  TL++LI  FC       I  AF +   ++++G+ PN  T   LI GLC  G  
Sbjct: 91  GITPDLCTLSILINCFCH---LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEI 147

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++A     K+V +  ++ +  +Y  +I+G CK  +      LL +++   + P+   YT+
Sbjct: 148 KRALHFHDKVV-AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTT 206

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I+  CK      A DL   M  +G +PN++ Y  +I G C  G ++EA+ LL +   + 
Sbjct: 207 IIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN 266

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  D  T+ IL+    K+ +  +A+ LF  M    + P+I  YT+LI   C+   ++ + 
Sbjct: 267 INPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 326

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              ++    G+ P   +YT ++    + G + +A ++FQ +   G   +  TY  +I+GL
Sbjct: 327 ALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 386

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           CK     +       M GKG  P  +T  T+
Sbjct: 387 CKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 158/369 (42%), Gaps = 4/369 (1%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P  +    ++  L K         LF K    +   P++ T + +I+ +C    +  A  
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLF-KQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +   + ++G  PN  T  +LI G C  G  +RA    D +  +G   +  +Y  +I+GLC
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G  +    LL+K     ++ D + YT ++    K      A  L+  M+  G++P++ 
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YTTLI  FC    +KE+     E     + P   T+  +I    ++G I  A+  F+ M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 P+ +TY +LI GLCK   L+ A    + M  +GI P   +   L    CK G  
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A    + L  K   L +RT N +I  LC     G       K+ GK    + ++   +
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417

Query: 651 KNACYESNK 659
             A  E ++
Sbjct: 418 ICALLEKDE 426



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 156/349 (44%), Gaps = 4/349 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    +  ++S   K ++      L ++ +  G+ P+  T + LI   C + +   A+ +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              + K G  PN    N +I GLC  G ++ A     K   +  Q D+++Y  L++   K
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             ETK    L  ++    + PD+  YTT+I   C+ K + ++   + E I  G+ P   T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G+   GN+  A      M      PD  T+  LI  L K+ K+DEA   +E M 
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
            K + P  VT  +L    CK      A+ + + + ++     + +   L+  LC   R+ 
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            A  FF  LL K  +++  +   + N   ++  +    DL  ++ EG G
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM-EGKG 406



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+  F RM+     P    +  ++++  + K+       F++    G+ P   T + +I
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +    +I+ A   F  + + G  P+ IT   LI GLC   ++  A  F++ ++ +G  
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
             +V+  TL    CK G++     +L  L+    K  +    T+I  LC  K +G A   
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 632 FHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQ 668
           + +++ K  + +  +   L +  C   N    FS L++
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNE 261


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 226/498 (45%), Gaps = 72/498 (14%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   G+     T N ++G  C+ G +  A  +F++M   G+  D  +Y  ++  Y ++G
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + E+      M   G   D  T   LI +FC   F+G ++ AFE   EM  K  KPNV 
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCK--FKGMLR-AFEFFREMKDKDLKPNVI 238

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVR--------------------------------- 324
           +++ LID LCK+G  + A + F+ + R                                 
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 325 -SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             ++   N+ TYT ++ G C+E  MN AE L   M + G+ PN   YT+LI+GH KV + 
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ++A +L + M ++   P+I  +  I+ GLC + +++E   ++ +  +  + A+ + YT L
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 444 LSEHLKQAETKQALGL---------------FC--------------------RMVKAGL 468
           +  + K     +A+ L               FC                    RM    L
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDL 478

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P++  YT LI   C+   + +++K F E     + P K  YT+MI G L+ GN   A+ 
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              +M ++G   D   Y +L+ GL +  ++ +A +F   MIGKGI P E     L  ++ 
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHY 598

Query: 589 KQGDSATAMIILESLDKK 606
           + G+   A+ +   L +K
Sbjct: 599 ELGNIDEAIELQNELVEK 616



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 206/452 (45%), Gaps = 4/452 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   + S   E+G L+      + MT   +     + N  +    + G  + + + F +M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +Y +M+   C+ G +  A      M   G   D  T   LI  +   G  
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY---GKI 180

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + ++  L EEM   G +P+V T+  LI+  CK     +AF  F ++ +  + KPNV +
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM-KDKDLKPNVIS 239

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I   CKE  M  A      M   GLLPN  TY+SLI  +CK GN   A+ L D M 
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +E    NI  Y  ++DGLC++G + EA EL +   +  +  +   YT L+  H+K     
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A+ LF  M +  + PDI  + T++   C + K++E +    E   +G+      YT+++
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + GN + A+   + M  +G     +T+ ALI GLCK+  + EA  ++  M    + 
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQ 479

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           P       L    CK      A  + + +  K
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDK 511



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 191/405 (47%), Gaps = 39/405 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++SF +   +   F    EM +  L     + + ++   C+ G+++ A + F +M   G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ A C+ G + EA      ML     L+  T T L+   C++G    + 
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGM---MN 324

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL   M + G  PN+  +T LI G  K    +KA  LF ++ R  + KP++  +  +
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM-REKDIKPDILLWGTI 383

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C E K+   ++++  MKE G+  N   YT+L+  + K GN   A +L++ M   G 
Sbjct: 384 VWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443

Query: 399 -----------------------------------TPNIYAYNAIIDGLCKKGRVQEAYE 423
                                               PN+  Y A+IDGLCK   + +A +
Sbjct: 444 EVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK 503

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   + +  DKI YT ++  +LK    ++AL +  +M++ G+  D++AYT+L+    
Sbjct: 504 LFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLS 563

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           +  +++++ KF  E I  G+ P +   T ++  +   GNI  A++
Sbjct: 564 QCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIE 608



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 123/262 (46%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    + A+ S   +   +  A     RM +  +LP   +  + ++   K G  + + D 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P ++ YN +I  +CK+G +  A  L ++  +  L  D +TY  L+  + K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +++ LF  M   G  PD+  Y  LI +FC+ K M  + +FF+E     L P   +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+++I    ++G +  A+K+F  M ++G  P+  TY +LI   CK   L EA    + M+
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            + +    VT  TL    C++G
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEG 321



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 4/278 (1%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P    + +L     ++G  E A      M K    P   + NA +  L K G    + +
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
             +      +     TY I++    K+ +   A  LF +M K GL PDI  Y TLI  + 
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   + ES   F+E    G  P   TY ++I  + +   +  A ++F+ M      P+ I
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +Y  LI  LCK+  +  A +F+  M   G+ P E T  +L    CK G+   A ++ + +
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 604 DKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            ++   L I T  TL+  LC E  +  A   F + +GK
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF-RAMGK 335


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 253/557 (45%), Gaps = 49/557 (8%)

Query: 154 EVMQCMVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           E +  ++S++A  G +KE    ++ VI++ +N +P + +  N ++ +    G VE A +V
Sbjct: 132 EALSFVISAYAGSGLVKEALELYNTVIDV-HNCVPDVFAC-NSLLNLLVHHGKVEIARKV 189

Query: 211 FDEMCARGVCADASSYKLMVV--AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +DEM  R    D  +Y + +V    C+ G+V E    +     +G + +      LI  +
Sbjct: 190 YDEMVDRN--GDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGY 247

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL------ 322
           C  G    I++A  L +E+  KG+ P V T+  +I+  CKKG  E   +L +++      
Sbjct: 248 CKNG---DIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLA 304

Query: 323 -------------------------VR---SDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
                                    VR       +P++ TY  +I+G C + K+  AE L
Sbjct: 305 VSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEEL 364

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           LE    +GL PN  +YT LI+   K G + RA +L+  M + G T ++ AY A++ GL  
Sbjct: 365 LEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVV 424

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G V  A  +  K  +R +  D   Y +L+S   K+     A  L   M+   + PD   
Sbjct: 425 AGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFV 484

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
             TL+  F R   + E++K FQ  I  G+  +     +MI GY + G ++ A+  F+RM 
Sbjct: 485 NATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMF 544

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
               +PD  TY  +I G  KQ+ L  A + +  M+ K   P  VT  +L   +C+ GD  
Sbjct: 545 NGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLN 604

Query: 595 TAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            A  + E   S   +  + T   LI   C E ++  A  FF ++L      +  +   L 
Sbjct: 605 RAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLV 664

Query: 652 NACYESNKYALFSDLSQ 668
           N    +N  A+ S  S 
Sbjct: 665 NGLTNNNGIAISSKRSN 681



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 246/574 (42%), Gaps = 72/574 (12%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEI---------------GRLKEGFSMVIEMTNNGLPLI 187
           L+ +G  E A +V   MV    ++               G+++EG  ++ +    G    
Sbjct: 177 LVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPN 236

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
               N ++   C+ G +E A  +F E+  +G      +Y  M+ A+C+ G+    D+ L 
Sbjct: 237 IVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLV 296

Query: 248 AMLDRGAIL-----------------------------------DNATLTLLITAFCDKG 272
            M +RG  +                                   D AT   LI   C K 
Sbjct: 297 EMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSK- 355

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G +++A ELLE  +R+G  PN +++T LI    K G   +A  L +++     +  ++
Sbjct: 356 --GKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSER-GHTLDL 412

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y A++ G     +++ A  + ++M E+G+LP+ N Y  L+ G CK G F  A  L+  
Sbjct: 413 IAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVE 472

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +  TP+ +    ++DG  + G + EA +L +   +R +    +    ++  + K   
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGM 532

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              AL  F RM     +PD   Y+T+I  + +Q  ++ + + F   +     P   T+TS
Sbjct: 533 MNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTS 592

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G+ R+G+++ A K F+ M   G  P+ +TY  LI   CK+ KL +AC F+E M+   
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652

Query: 573 ISPCEVTRVTLAYEYCKQGDSATA----------------MIILESLDKKLWIRTVNTLI 616
             P + T   L          A +                M+I +  D +  I   N+++
Sbjct: 653 CIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWR--IAAYNSIL 710

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             LC  K V  A     K++ K    D VS  AL
Sbjct: 711 LCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIAL 744



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 223/507 (43%), Gaps = 65/507 (12%)

Query: 146 NGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
           NG+ ERA+ + +                M+++F + G+ +    +++EM   GL +    
Sbjct: 250 NGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQI 309

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++    + G    A +    M   G   D ++Y  ++   C  G+V EA+  L   +
Sbjct: 310 FNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAI 369

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG   +  + T LI AF   G      +A ELL EM  +G   ++  +  L+ GL   G
Sbjct: 370 RRGLFPNKFSYTPLIHAFSKNG---EYVRASELLIEMSERGHTLDLIAYGALVHGLVVAG 426

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             + A  +  K++      P+ + Y  ++SG CK+ +   A+ LL  M +Q + P+    
Sbjct: 427 EVDVALTVRDKMMER-GILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVN 485

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +L+ G  + GN + A  L  L  + G   ++   NA+I G CK G + +A    K+ F 
Sbjct: 486 ATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFN 545

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                D+ TY+ ++  ++KQ + + AL +F  M+K    P++  +T+LI  FCR   +  
Sbjct: 546 GVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNR 605

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +EK F+E  + G  P   TYT +I  + ++G ++ A  +F++M    C P++ T+  L++
Sbjct: 606 AEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVN 665

Query: 551 GL----------------------------------------------CKQSKLDEACQF 564
           GL                                              C+   +  A Q 
Sbjct: 666 GLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQL 725

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQG 591
           ++ M+ KG  P  V+ + L +  C +G
Sbjct: 726 HDKMMSKGFPPDPVSFIALLHGLCLEG 752



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 10/371 (2%)

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTH 299
           E +  L  M  +  I     L+ +I+A+   G    +K+A EL   ++      P+V+  
Sbjct: 114 EIENLLETMKSKELIPTCEALSFVISAYAGSGL---VKEALELYNTVIDVHNCVPDVFAC 170

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI--SGYCKEEKMNRAEMLLER 357
             L++ L   G  E A +++ ++V  +    +V  YT  I   G CKE K+     L+E+
Sbjct: 171 NSLLNLLVHHGKVEIARKVYDEMVDRNG---DVDNYTVCIVTKGLCKEGKVEEGRHLIEK 227

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
              +G +PN   Y +LI G+CK G+ ERA  L   +  +G  P +  Y A+I+  CKKG+
Sbjct: 228 RWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGK 287

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            +   +LL +  +R L      +  ++    K     +A      M+++G  PD+  Y T
Sbjct: 288 FEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNT 347

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C + K++E+E+  + AI  GLFP K +YT +I  + ++G    A +    M++ G
Sbjct: 348 LINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERG 407

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATA 596
              D I YGAL+ GL    ++D A    + M+ +GI P       L    CK+G   A  
Sbjct: 408 HTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAK 467

Query: 597 MIILESLDKKL 607
            +++E LD+ +
Sbjct: 468 QLLVEMLDQNV 478



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 221/514 (42%), Gaps = 26/514 (5%)

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRL 169
           E G  V+L  F   I  A+F+H   +    A   +     E        +++     G++
Sbjct: 300 ERGLAVSLQIFNGIID-ARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKV 358

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           +E   ++      GL     +   ++    + G    A E+  EM  RG   D  +Y  +
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V      G V  A      M++RG + D     +L++  C KG   + KQ   LL EM+ 
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQ---LLVEMLD 475

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           +   P+ + +  L+DG  + G  ++A +LF +L        +V    AMI GYCK   MN
Sbjct: 476 QNVTPDAFVNATLVDGFIRHGNLDEAKKLF-QLTIERGIDTSVVECNAMIKGYCKYGMMN 534

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A +  +RM      P+  TY+++I G+ K  +   A  +  LM K+ C PN+  + ++I
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLI 594

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           +G C+ G +  A ++ ++      + + +TYTIL+    K+ +  +A   F +M+     
Sbjct: 595 NGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCI 654

Query: 470 PDIHAYTTLIAAFCRQKKMKESEK-----------FFQEAITAGLFPTKETYTSMICGYL 518
           P+   +  L+        +  S K           FF   I+ G       Y S++    
Sbjct: 655 PNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLC 714

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE-----ACQFYESMIGKGI 573
           +   +  A++   +M   G  PD +++ AL+ GLC + +L +      C F E  +   +
Sbjct: 715 QHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAV 774

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
              E        ++  +G ++ A ++L++L +K 
Sbjct: 775 KYSEKLD-----QFLSEGLTSDASLLLQTLVEKF 803



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 133/333 (39%), Gaps = 55/333 (16%)

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD-LMGKEGCTPNIYAYNAIID 410
           E LLE MK + L+P     + +I  +   G  + A +L + ++    C P+++A N++++
Sbjct: 116 ENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLN 175

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            L   G+V+ A ++  +   R                                     N 
Sbjct: 176 LLVHHGKVEIARKVYDEMVDR-------------------------------------NG 198

Query: 471 DIHAYTTLIA--AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           D+  YT  I     C++ K++E     ++    G  P    Y ++I GY ++G+I  A  
Sbjct: 199 DVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANL 258

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+ +   G  P   TYGA+I+  CK+ K +   +    M  +G++        +     
Sbjct: 259 LFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARF 318

Query: 589 KQGDSATAMIILESLDKKLWI---------RTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           K G        +E+ D   W+          T NTLI   CS+ +V  A       + + 
Sbjct: 319 KHGCE------IEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG 372

Query: 640 QNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
              ++ S   L +A  ++ +Y   S+L   ++E
Sbjct: 373 LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSE 405


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 220/450 (48%), Gaps = 36/450 (8%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +  + G   D  +  +++  +C +  +T A   L+ +L RG   +  TL  LI   C
Sbjct: 85  LFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLC 144

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              FRG IK+A    +++V +G++ N  ++  LI+GLCK G T+   RL  KL    + K
Sbjct: 145 ---FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKL-EGHSVK 200

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I   CK + +  A  L   M  +G+ PN  TY +L+YG C +G+ + A+ L
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL 260

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M  +   P++  +N +ID L K+G+++ A  +L    +  ++ D +TY  L+  +  
Sbjct: 261 LNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFF 320

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K A  +F  M ++G+ P++  YTT+I   C++K + E+   F+E     + P   T
Sbjct: 321 LNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVT 380

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YTS+I G  ++ ++  A+   ++M + G  PD  +Y  L+  LCK  +L+ A +F++ ++
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
            KG                                  L ++T N +I  LC     G A 
Sbjct: 441 VKGYH--------------------------------LNVQTYNVMINGLCKADLFGEAM 468

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNK 659
               K+ GK    D ++   +  A +E ++
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEKDE 498



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 235/539 (43%), Gaps = 37/539 (6%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P  ++T    S  Q          + S+ +   +R  PP  +    + SL + +   
Sbjct: 21  SYPPIATATLHYQSHSQPHYHHHHHHAVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYP 80

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS 162
            V SL                  F KF        +C  +++ N                
Sbjct: 81  TVISL------------------FKKFESNGATPDLCTLNILMN---------------C 107

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           F  +  +   FS++  +   G      TLN ++   C  G ++ A    D++ A+G   +
Sbjct: 108 FCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLN 167

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             SY+ ++   C+ G      R L  +       D      +I + C     G    A +
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGD---ACD 224

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L  EM+ KG  PNV T+  L+ G C  G  ++AF L L  ++  N  P+V T+  +I   
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL-LNEMKLKNINPDVCTFNTLIDAL 283

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            KE KM  A+++L  M +  + P+  TY SLI G+  +   + A  +   M + G TPN+
Sbjct: 284 GKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNV 343

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +IDGLCK+  V EA  L ++   + +  D +TYT L+    K    ++A+ L  +
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G+ PD+++YT L+ A C+  +++ +++FFQ  +  G     +TY  MI G  +   
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
              A+    +M   GC PD IT+  +I  L ++ + D+A +    MI +G+      R+
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRL 522



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 209/456 (45%), Gaps = 27/456 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F  +G LKE FS++ EM    +     T N ++    + G ++ A+ V   M    
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC 303

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++  Y  + +V  A     +M   G   +  T T +I   C +     + 
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM---VD 360

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L EEM  K   P++ T+T LIDGLCK    E+A  L  K+ +    +P+V++YT +
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM-KEQGIQPDVYSYTIL 419

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CK  ++  A+   +R+  +G   N  TY  +I G CK   F  A DL   M  +GC
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ-----------------------A 435
            P+   +  II  L +K    +A ++L++   R LQ                        
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D +TY  L+  +    E K A  +F  M + G+ P++  YT +I   C++K + E+   F
Sbjct: 540 DVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLF 599

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           +E     +FP   TYTS+I    ++ ++  A+   + M + G  PD  +Y  L+ GLCK 
Sbjct: 600 EEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS 659

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            +L+ A + ++ ++ KG          +  E CK G
Sbjct: 660 GRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAG 695



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 210/473 (44%), Gaps = 62/473 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  + G++K    ++  M    +     T N ++     L  V+ A+ VF  M   G
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  M+   C+   V EA      M  +  I D  T T LI   C       ++
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK---NHHLE 395

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L ++M  +G +P+VY++T+L+D LCK G  E A   F +L+    Y  NV TY  M
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL-VKGYHLNVQTYNVM 454

Query: 339 ISGYCK-----------------------------------EEKMNRAEMLLERMKEQGL 363
           I+G CK                                   +++ ++AE +L  M  +GL
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 364 L-----------------------PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
                                   P+  TY +L+ G+  V   + A  +   M + G TP
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  Y  +IDGLCKK  V EA  L ++   + +  + +TYT L+    K    ++A+ L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M + G+ PD+++YT L+   C+  +++ +++ FQ  +  G     + YT+MI    + 
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           G    A+    +M   GC PD +T+  +I  L ++ + D+A +    MI +G+
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 197/423 (46%), Gaps = 37/423 (8%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           GA  D  TL +L+  FC       I  AF +L  ++++G+ PN  T   LI GLC +G  
Sbjct: 93  GATPDLCTLNILMNCFCH---LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEI 149

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           +KA   F   V +  ++ N  +Y  +I+G CK  +      LL +++   + P+   Y +
Sbjct: 150 KKAL-YFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 208

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I+  CK      A DL   M  +G +PN+  YNA++ G C  G ++EA+ LL +   + 
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  D  T+  L+    K+ + K A  +   M+KA + PD+  Y +LI  +    K+K ++
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F     +G+ P   TYT+MI G  ++  +  A+  F+ M      PD +TY +LI GL
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           CK   L+ A    + M  +GI P                D  +  I+L++L         
Sbjct: 389 CKNHHLERAIALCKKMKEQGIQP----------------DVYSYTILLDAL--------- 423

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
                  C   R+  A  FF +LL K  +++  +   + N   +++ +    DL  ++ E
Sbjct: 424 -------CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM-E 475

Query: 673 GIG 675
           G G
Sbjct: 476 GKG 478



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 42/339 (12%)

Query: 136 YIVCATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMT 180
           Y +   +L   G  E A E  Q                M++   +     E   +  +M 
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG---------------------- 218
             G      T   ++    E    + AE++  EM ARG                      
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535

Query: 219 -VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            +  D  +Y  ++  Y  +  +  A     +M   G   +    T++I   C K    ++
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK---TV 592

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L EEM  K   PN+ T+T LID LCK    E+A  L LK ++    +P+V++YT 
Sbjct: 593 DEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIAL-LKEMKEHGIQPDVYSYTI 651

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G CK  ++  A+ + +R+  +G   N   YT++I   CK G F+ A DL   M  +G
Sbjct: 652 LLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKG 711

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           C P+   ++ II  L +K    +A ++L +   R L  +
Sbjct: 712 CMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 19/437 (4%)

Query: 201 LGLVEYAEEVFDEM--CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA---- 254
           LGL E A ++FDE+  CAR     A +  L VV+  R G  + ++R +S +  R A    
Sbjct: 28  LGLDE-ALKLFDELLHCARPASVRAFNQLLTVVS--RAGCSSASERVVS-LFTRMARECS 83

Query: 255 --ILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
             +  NA T ++LI  FC  G    ++  F     +++ GW+ NV   + L+ GLC    
Sbjct: 84  SKVAPNACTYSILIGCFCRMG---RLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKR 140

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A  + L  +      P+V  Y  +I+G+ +E ++ +A  L   M +QG+ PN  TYT
Sbjct: 141 VDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYT 200

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I G CK    +RA  +   M   G  P+   YN +I G    G+ +E  ++L++    
Sbjct: 201 TVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTH 260

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L+ D ITY +LL    K    ++A   F  M + G+ PD+  Y  L+  +  +  + E 
Sbjct: 261 GLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEM 320

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             F    +  G+ P +  +  M C Y +   I  A+  F +M Q G +PD +++GALI  
Sbjct: 321 HSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDA 380

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIR 610
           LCK  ++D+A   +  MI +G++P      +L Y  C  G    A  +  E LD+ + + 
Sbjct: 381 LCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVD 440

Query: 611 TV--NTLIRKLCSEKRV 625
            V  NTL+  LC+E RV
Sbjct: 441 AVFFNTLMCNLCNEGRV 457



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 261/583 (44%), Gaps = 13/583 (2%)

Query: 94  SLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERA 152
           S   E+ +++   +A E  S VA +   ++I    F    RL +   A  LI    +   
Sbjct: 65  SSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVN 124

Query: 153 HEVMQCMVSSFAEIGRLKEGFS-MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
             V+  ++    +  R+ E    +++ M+  G P      N V+      G VE A  +F
Sbjct: 125 VIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLF 184

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            EM  +G+  +  +Y  ++   C+   V  A      M+DRG   DN T   LI  +   
Sbjct: 185 LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLST 244

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G     K+  ++LEEM   G +P+  T+ +L+D LCK G   +A RLF   +     KP+
Sbjct: 245 G---KWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA-RLFFDSMFRKGIKPD 300

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  Y  ++ GY  +  ++     L+ M   G+ PN   +  +   + K    E A  + +
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M ++G +P++ ++ A+ID LCK GRV +A     +     +  +   ++ L+       
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + ++A  LF  ++  G+  D   + TL+   C + ++ E+++     I  G+ P   +Y 
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +++ G+   G I  A K    M   G  P+  TY  L+ G CK  ++D+A   +  M+ K
Sbjct: 481 TLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK 540

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAM-IILESLDK--KLWIRTVNTLIRKLCSEKRVGMA 628
           G++P   T  T+ +   + G  + A  + L  ++   K  I T N ++  LC    V  A
Sbjct: 541 GVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEA 600

Query: 629 ALFFHKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLS 667
              F +L  KD  +D V+    + AL     + +   LF+ +S
Sbjct: 601 FKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATIS 643



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 227/486 (46%), Gaps = 7/486 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  +   G+ KE   M+ EM+ +GL     T   ++   C+ G    A   FD M  
Sbjct: 235 NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR 294

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D + Y +++  Y   G ++E   +L  M+  G   +     ++  A+  K     
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAM--- 351

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I++A  +  +M ++G  P+V +   LID LCK G  + A   F +++ ++   PN+  ++
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI-NEGVTPNIFVFS 410

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +++ G C   K  +AE L   + +QG+  +   + +L+   C  G    A  L+DLM + 
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV 470

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PN+ +YN ++ G C  GR+ EA +LL       L+ ++ TYTILL  + K      A
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  M+  G+ P +  Y T++    +  +  E+ + +   I +       TY  ++ G
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             ++  +  A K F+R+       D++T+  +I  L K  + ++A   + ++   G+ P 
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFH 633
            VT   +A    ++G       +  +++K         +N L+R+L     +  A ++ +
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLY 710

Query: 634 KLLGKD 639
           KL  K+
Sbjct: 711 KLDEKN 716



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 198/408 (48%), Gaps = 5/408 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG       +   M  ++A+   ++E   +  +M   GL     +   ++   C+LG
Sbjct: 327 MVGNG-VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLG 385

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   GV  +   +  +V   C +G+  +A+     +LD+G  +D     
Sbjct: 386 RVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFN 445

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+   C++G    + +A  L++ M+R G +PNV ++  L+ G C  G  ++A +L L +
Sbjct: 446 TLMCNLCNEG---RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL-LDV 501

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S+  KPN  TYT ++ GYCK  +++ A  L   M  +G+ P   TY ++++G  + G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M       +IY YN I++GLCK   V EA+++ ++   ++ Q D +T+ I
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK    + A+ LF  +   GL PD+  Y  +      +  + E +  F     +G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             P      +++   L  G+IS A  Y  ++++   + +  T   LIS
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS 729


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 213/438 (48%), Gaps = 27/438 (6%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L+++G FERA  V + +V    ++ R    ++++I               R  G +   G
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRF--AYNVLI---------------RYFGRS---G 114

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A E+F EM  +G   D  +Y  +V A  + GRV EA  +  AML+RG   +  T  
Sbjct: 115 QLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYN 174

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           LL+ AF      G +  A  L  EM R+G++P+V T+ +L+D LC  G    A +LF K+
Sbjct: 175 LLMDAFRKV---GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
              D   P+ +TY+ +++G  K  ++  A  +   M ++G+  +   Y SL+    K GN
Sbjct: 232 T-GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN 290

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            +R + LM  M ++G  P+ +++N I+D L K  +   A E+  +  +   + D I+Y I
Sbjct: 291 MDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNI 350

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + +  +  QA  +   MV+AG  P+   Y +LI       ++ E+    +E  TAG
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAG 410

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   TY  ++    + G    A + FQ+M   G  PD ++Y   I GL    +LDEA 
Sbjct: 411 CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEAL 470

Query: 563 QFYESMIGKGISPCEVTR 580
             ++ M   G   C V +
Sbjct: 471 VLFKDMKAVG---CPVDK 485



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 200/452 (44%), Gaps = 39/452 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+   A  G L    +++ EM   G PL  +TL +++           A ++F++  +  
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++  ++      G    A+     ++ +G  LD     +LI  F   G  G + 
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYF---GRSGQLD 117

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+  EM  KG +P+ YT+  L++ L K G  ++A R F   +      PN+ TY  +
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEA-RSFFDAMLERGLTPNIPTYNLL 176

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  + K  +++ A  L   MK +G  P+  TY  L+   C  G    A  L   M  +GC
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ--- 455
           +P+ Y Y+ +++GL K GRV+EA+++ ++   R +  D + Y  LL+   K     +   
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 456 ----------------------ALG----------LFCRMVKAGLNPDIHAYTTLIAAFC 483
                                 ALG          +F RMV++G  PD+ +Y  LI ++ 
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R     ++ +  +E + AG  P  +TY S+I     DG +  A    + M   GC PD +
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           TY  L+  L K+ +   A + ++ M  KG+ P
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 205/411 (49%), Gaps = 4/411 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+LKE       +   G  L   +   ++   C++G    A ++  ++  + V  D   Y
Sbjct: 143 GKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMY 202

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ + C+   V++A +  S M+ +    D  T   LI  FC     G +K+AF L  E
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFC---VVGQLKEAFGLFHE 259

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV K   P+VYT ++L+D LCK G   +A +  L ++      P+V TY++++ GYC   
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRA-KNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++N+A+ +   M   G+ P+ ++Y  +I G  K+   + A  L   M  +G  P+   YN
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++IDGLCK GR+  A++L+ +     + AD +TY  L+    K     +A+ L  ++   
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P ++ Y  LI   C+  ++K ++  FQ+ +  G      TY  MI G  ++G  + A
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
                +M   G  PD +TY  +I  L ++ + ++A +    MI +G+  C+
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLLCK 549



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 219/453 (48%), Gaps = 10/453 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ +  +G +   FS+  ++   G    T T N ++   C  G ++ A    D + A G
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
              D  SY+ ++   C++G    A + L  +  +    D     ++I + C DK    ++
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDK----AV 215

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A++L  EM+ K   P+V T   LI G C  G  ++AF LF ++V   N  P+V+T++ 
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSI 274

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK+  + RA+ +L  M +QG++P+  TY+SL+ G+C V    +A  +   M + G
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ ++YN +I+GL K   V EA  L K+   + +  D +TY  L+    K      A 
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAW 394

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   G+  DI  Y +LI   C+   + ++    ++    G+ P+  TY  +I G 
Sbjct: 395 QLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGL 454

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G + +A   FQ +   G + +  TY  +I+GLCK+   +EA      M   GI P  
Sbjct: 455 CKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDA 514

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           VT  T+     ++ ++  A    E L +++ IR
Sbjct: 515 VTYETIIRALFRKDENEKA----EKLLREMIIR 543



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 243/559 (43%), Gaps = 43/559 (7%)

Query: 114 MVALSFFYWAIGF------AKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIG 167
           M+   F Y++  F      A F H++  +I  +     N +           VSSF  + 
Sbjct: 1   MLKNRFIYYSNNFLIPPFRASFCHYLHPFIPKSNDFDVNND-----------VSSFHRML 49

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY--AEEVFDEMCARGVCADASS 225
           R++   S+V               N+++G   +     Y  A  +  ++  +G+     +
Sbjct: 50  RMRPTPSIV-------------EFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           + ++V  YC +G +T A    + +L  G      T   LI   C     G +K+A    +
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC---LNGKLKEALHFHD 153

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            ++  G+  +  ++  LI+GLCK G T  A ++ LK +       +V  Y  +I+  CK+
Sbjct: 154 HVIALGFHLDQVSYRTLINGLCKIGETRAALQM-LKKIEGKLVNTDVVMYNIIINSLCKD 212

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + ++ A  L   M  + + P+  T+ SLI G C VG  + A+ L   M  +   P++Y +
Sbjct: 213 KAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTF 272

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + ++D LCK G +  A  +L    ++ +  D +TY+ L+  +    E  +A  +F  M +
Sbjct: 273 SILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSR 332

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P  H+Y  +I    + K + E+   F+E    G+ P   TY S+I G  + G IS 
Sbjct: 333 LGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISY 392

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +    M+  G   D +TY +LI  LCK   +D+A    + +  +GI P   T   L  
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452

Query: 586 EYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
             CK G    A  + + L  K      W  T N +I  LC E     A +   K+     
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAW--TYNIMINGLCKEGLFNEAEVLLSKMENNGI 510

Query: 641 NVDRVSLAALKNACYESNK 659
             D V+   +  A +  ++
Sbjct: 511 IPDAVTYETIIRALFRKDE 529


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 232/494 (46%), Gaps = 8/494 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++    + GRL++G  +++   + G+ L     +  +    ++G +    +++  M
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  S  +++  +C+ GR+ EA      +L  G      T + LI  FC     
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKS--- 460

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G+++  F L E+M++K  +P+   ++VLI+GLCK+G    A R F + V      PNV T
Sbjct: 461 GNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNR-GLSPNVFT 519

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
              ++  +C+ + +  A  +   M    +  +T TYT LI G  + G  + A  L   M 
Sbjct: 520 LNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML 579

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+   P++  Y  +IDGLCK  +      +     +  +  D   Y +L++ H ++   +
Sbjct: 580 KKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLE 639

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            ALGLF  +V+ G  PD+  + T+I  +C  K++ ++ + F +  +  L P   T+T +I
Sbjct: 640 AALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILI 699

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK-QSKLDEACQFYESMIGKGI 573
             + R+G +  A+  F +M + G  P+ +TY  LI G  K QS ++   + Y  M+   I
Sbjct: 700 DAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNI 759

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAAL 630
           +P  V+   L    CK+G    A      +LDK L    +    LIR  C   R+  A +
Sbjct: 760 APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMM 819

Query: 631 FFHKLLGKDQNVDR 644
            +  +L      DR
Sbjct: 820 LYDNMLLNRLTPDR 833



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 223/493 (45%), Gaps = 39/493 (7%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           +IG   + F+MV+ +   G      T + ++   C+ G ++ A  +FD M   GV  D  
Sbjct: 287 DIGVADDYFNMVVRI---GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
            Y +++    + GR+ +  R L   LD+G  LD    +  + A+   G  G + Q ++  
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK-- 401

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
             M+ +G  PNV + ++LI G C+ G   +A  LF+++++   ++P++ TY+A+I+G+CK
Sbjct: 402 -RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKL-GFEPSILTYSALIAGFCK 459

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              +     L E M ++   P+T  Y+ LI G CK G    A          G +PN++ 
Sbjct: 460 SGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFT 519

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            N ++D  C+   +  A ++        ++AD +TYTIL+    +     +AL LF +M+
Sbjct: 520 LNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML 579

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           K    PD+  Y TLI   C+ KK       F       + P    Y  +I  + R+G++ 
Sbjct: 580 KKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLE 639

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +A+  F  + + G  PD  T+  +I   C   +LD+A Q +  M  + + P  +T     
Sbjct: 640 AALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT----- 694

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
                                         LI   C E R+  A L F K+L +    + 
Sbjct: 695 ---------------------------FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNL 727

Query: 645 VSLAALKNACYES 657
           V+ + L +  ++S
Sbjct: 728 VTYSCLIHGYFKS 740



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/585 (23%), Positives = 263/585 (44%), Gaps = 59/585 (10%)

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMR 134
           + FH + +P  LN  I +  L       V+ SL  +  S  A+ FF WA  F  F   + 
Sbjct: 59  KAFHNQQNPKPLN-PILLSKLQLYHVPDVIISLQPKPFS--AIRFFEWAESF--FISPLS 113

Query: 135 LYIVCAT--SLISNGNFERAHEVMQCMVSSFAE----IGRLKEGFSMVIEMTNNGLPLIT 188
               CA    L+ N  F RA  V    +  F      +   ++GF   ++ TN+ +    
Sbjct: 114 APSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRDGFC-DLDSTNHSV---- 168

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                ++   C  G+ + + ++F  +C +G+    +   L++                  
Sbjct: 169 -VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLL------------------ 209

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
               G+++D+  + +++  +             EL   M  + +      +  +++    
Sbjct: 210 ----GSLIDSHCVEVIVDKYG------------ELCSAMREQPFS----VYEFVMNRFMN 249

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           KG  E   R    LV+   +  ++ T   ++ G   +  +  A+     +   G  PN  
Sbjct: 250 KGEVEMGLRFHKALVQG-GFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVV 308

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+++LI  +CK GN ++A+ L D+M   G TP++  Y+ +IDGL K GR+++   LL  A
Sbjct: 309 TFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVA 368

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
             + ++ D + ++  +  ++K  +  + + ++ RM+  G++P++ + + LI  FC+  ++
Sbjct: 369 LDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRI 428

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+   F + +  G  P+  TY+++I G+ + GN+      ++ M +  C PD I Y  L
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVL 488

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM---IILESLDK 605
           I+GLCKQ  + +A +F+   + +G+SP   T  TL   +C+      AM    ++  L+ 
Sbjct: 489 INGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNI 548

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K    T   LI+      RV  A + F ++L KD   D ++   L
Sbjct: 549 KADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 214/443 (48%), Gaps = 10/443 (2%)

Query: 154 EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            V+ C  ++  F + GR+ E   + +++   G      T + ++   C+ G +     ++
Sbjct: 411 NVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLY 470

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD- 270
           ++M  +    D   Y +++   C+ G V +A R+    ++RG   +  TL  L+ +FC  
Sbjct: 471 EDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRL 530

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           K   G++K  +     M     K +  T+T+LI G  + G  ++A  LF ++++ D +KP
Sbjct: 531 KCIVGAMKVYYL----MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKD-FKP 585

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           +V TY  +I G CK +K +    + + M +  + P+   Y  LI  H + G+ E A  L 
Sbjct: 586 DVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLF 645

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + + G  P+++ +N +I   C   R+ +A +L  K    +L+ + IT+TIL+    ++
Sbjct: 646 VHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCRE 705

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE-KFFQEAITAGLFPTKET 509
                A+ +F +M++ G  P++  Y+ LI  + + + M ES  K + E +   + P   +
Sbjct: 706 GRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVS 765

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+ +I G  + G +  A   F+        PD I Y  LI G CK  +L EA   Y++M+
Sbjct: 766 YSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825

Query: 570 GKGISPCEVTRVTL-AYEYCKQG 591
              ++P      TL  Y+  K G
Sbjct: 826 LNRLTPDRFLERTLEEYQLKKAG 848



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE +      +++ F + G L++GF +  +M        T   + ++   C+ GLV  A 
Sbjct: 443 FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDAL 502

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR--WLSAMLDRGAILDNATLTLLIT 266
             F +   RG+  +  +   ++ ++CR+  +  A +  +L  ML+  A  D  T T+LI 
Sbjct: 503 RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA--DTVTYTILIK 560

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                   G + +A  L  +M++K +KP+V T+  LIDGLCK   +     +F   +  +
Sbjct: 561 G---AAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIF-DFMCKN 616

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P++  Y  +I+ + +E  +  A  L   + E+G  P+  T+ ++I  +C     + A
Sbjct: 617 AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDA 676

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L   M  E   PN   +  +ID  C++GR+ +A  +  K  +   + + +TY+ L+  
Sbjct: 677 VQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG 736

Query: 447 HLK-QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           + K Q+  +  L L+  M++  + P+I +Y+ LI   C++  MKE+   F+ A+   L P
Sbjct: 737 YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLP 796

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
               YT +I GY + G ++ A+  +  M      PD
Sbjct: 797 DVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 224/477 (46%), Gaps = 32/477 (6%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   G+   T TLN ++   C+ G  E A EVFD+M  +G   +  S+ ++V  YCR G
Sbjct: 141 DMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAG 200

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
               A   L  M   G   +      LI++FC +G     ++A  L+E M   G  P+V 
Sbjct: 201 LSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRN---EEAERLVERMREDGLFPDVV 257

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEML 354
           T    I  LC  G   +A R+F  +   +     +PN+ T+  M+ G+CKE  +  A+ L
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +E MK  G L    +Y   + G  + G    A   +  M  +G  PNIY++N ++DGLCK
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G + +A  ++       +  D +TY+ LL       +  +A  +   M++ G +P+ + 
Sbjct: 378 NGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT 437

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM- 533
              L+ +  ++ ++ E+EK  Q+           T   +I G  + G +  AV+  + M 
Sbjct: 438 CNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMW 497

Query: 534 ----------------------NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
                                 N   C PD ITY  +I+GLCK  +LDEA + +  M+GK
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
            + P  +   T  + +CK G  ++A  +L+ ++K+     ++T N+LI  L S+ ++
Sbjct: 558 SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQI 614



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 174/717 (24%), Positives = 292/717 (40%), Gaps = 97/717 (13%)

Query: 40  LANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRS-------------SPPRL 86
           LA S+  +F S   +  PP  L     +MVLES  ++  + S             SP   
Sbjct: 97  LAFSQFQSFRSQVPANPPPVYLY----NMVLESSLREDKVDSFSWLYKDMVVAGVSPETY 152

Query: 87  NLQIDI----DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATS 142
            L + I    DS   E A  V   +  +       SF     G+ +    MR     A  
Sbjct: 153 TLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMR-----ALE 207

Query: 143 LISN-GNF--ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           L+   G+F  +    +   ++SSF   GR +E   +V  M  +GL     T N  +   C
Sbjct: 208 LLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALC 267

Query: 200 ELGLVEYAEEVFDEMCARGVCA----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
             G +  A  +F +M           + +++ LM+  +C+ G + EA   + +M   G +
Sbjct: 268 SAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL 327

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           ++  +  + +      G    + +A   L+EMV KG +PN+Y+   ++DGLCK G    A
Sbjct: 328 MELESYNIWLLGLVRNG---KLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDA 384

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            R+ + L+ S    P+  TY+ ++ G C   K+ +A  +L  M  +G  PNT T   L++
Sbjct: 385 -RMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLH 443

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF------ 429
              K G    A  L+  M +     +    N +IDGLCK G++ EA E+++  +      
Sbjct: 444 SLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAA 503

Query: 430 -----------------QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
                             ++   D ITY+I+++   K     +A   F  MV   L+PD 
Sbjct: 504 LGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDS 563

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y T I +FC+  K+  + +  ++    G   + +TY S+I G      I         
Sbjct: 564 IIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M + G  P+  TY  +IS LC+  ++ +A    + M+ KGISP   +   L   +CK  D
Sbjct: 624 MKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683

Query: 593 SATAMIILE-----------------------------------SLDK--KLWIRTVNTL 615
                 + E                                   +LD+   L     N L
Sbjct: 684 FGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDL 743

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           I KLC ++ +  A+   HK++ K    D  S   + +   +  K     +L++R+ +
Sbjct: 744 IEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 163/665 (24%), Positives = 286/665 (43%), Gaps = 71/665 (10%)

Query: 20  PSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQF-- 77
           P +T  +IR+       H      +QP   S  S  +  + L K+  S +  S +Q F  
Sbjct: 48  PIITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRS 107

Query: 78  HLRSSPPRLNL-QIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLY 136
            + ++PP + L  + ++S   E  +   + L  +   MV         G +   + + L 
Sbjct: 108 QVPANPPPVYLYNMVLESSLREDKVDSFSWLYKD---MVV-------AGVSPETYTLNLL 157

Query: 137 IVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTN 181
           I     L  +G FE A EV   M               V  +   G       ++  M +
Sbjct: 158 I---AGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGS 214

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
            G+       N ++   C  G  E AE + + M   G+  D  ++   + A C  G++ E
Sbjct: 215 FGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILE 274

Query: 242 ADRWLSAM-------LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           A R    M       L R  I    T  L++  FC +G    +++A  L+E M R G   
Sbjct: 275 ASRIFRDMQIDEELGLPRPNI---TTFNLMLEGFCKEGM---LEEAKTLVESMKRNGNLM 328

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
            + ++ + + GL + G   +A +L LK +     +PN++++  ++ G CK   ++ A M+
Sbjct: 329 ELESYNIWLLGLVRNGKLLEA-QLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +  M   G+ P+T TY++L++G C  G   +A +++  M + GC+PN Y  N ++  L K
Sbjct: 388 MGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL--------------- 459
           +GR+ EA +LL+K  +R    D +T  I++    K  +  +A+ +               
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNL 507

Query: 460 ---FCRMVKAGLN-----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              F  +V +  N     PD+  Y+ +I   C+  ++ E+ K F E +   L P    Y 
Sbjct: 508 GNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYD 567

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           + I  + + G ISSA +  + M + GC     TY +LI GL  ++++ E     + M  K
Sbjct: 568 TFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK 627

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           GI+P   T   +    C+ G    A  +L+ + +K     I +   LI+  C     G+ 
Sbjct: 628 GITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVV 687

Query: 629 ALFFH 633
              F 
Sbjct: 688 KEVFE 692



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 218/485 (44%), Gaps = 44/485 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L E    + EM + G+     + N V+   C+ GL+  A  +   M + G+  D  +Y
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C  G+V +A+  L  M+ RG   +  T  +L+ +   +G    I +A +LL++
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEG---RIFEAEKLLQK 460

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------FLKLV-RSDN 327
           M  + +  +  T  ++IDGLCK G  ++A  +                  F+ LV  S N
Sbjct: 461 MNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSN 520

Query: 328 YK---PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            K   P++ TY+ +I+G CK  +++ A      M  + L P++  Y + I+  CK G   
Sbjct: 521 GKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKIS 580

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A+ ++  M K GC  ++  YN++I GL  K ++ E Y LL    ++ +  +  TY  ++
Sbjct: 581 SAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMI 640

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S   +    K A  L   M++ G++P+I ++  LI AFC+       ++ F+ A++  + 
Sbjct: 641 SCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALS--IC 698

Query: 505 PTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
             KE  Y+ M    L  G +S A + F           N  Y  LI  LCK   L+ A  
Sbjct: 699 GHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASD 758

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
               MI KG            Y +    D A+ M +++ L K+      + L  ++    
Sbjct: 759 ILHKMIDKG------------YRF----DPASFMPVIDGLGKRGKKHDADELAERMMDMA 802

Query: 624 RVGMA 628
             GM 
Sbjct: 803 SEGMV 807



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 180/428 (42%), Gaps = 52/428 (12%)

Query: 294 PNVYTHT---VLIDGLCKKGWTEKAFRLFLKLVRSD--NYKPNVHTYTAMISGYCKEEKM 348
           P   +H     LI  L K G ++ AF  F +  RS      P V+ Y  ++    +E+K+
Sbjct: 74  PQEVSHVSLIALIRILAKSGLSDLAFSQF-QSFRSQVPANPPPVYLYNMVLESSLREDKV 132

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           +    L + M   G+ P T T   LI G C  G FE A ++ D MG +GC PN +++  +
Sbjct: 133 DSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGIL 192

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           + G C+ G    A ELL       +Q +K+ Y  L+S   ++   ++A  L  RM + GL
Sbjct: 193 VRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGL 252

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFF--------------------------------Q 496
            PD+  + + I+A C   K+ E+ + F                                +
Sbjct: 253 FPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLE 312

Query: 497 EAIT-------AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           EA T        G     E+Y   + G +R+G +  A    + M   G  P+  ++  ++
Sbjct: 313 EAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVM 372

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
            GLCK   + +A      MI  GI P  VT  TL +  C  G    A  IL  + ++   
Sbjct: 373 DGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCS 432

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
               T N L+  L  E R+  A     K+  +  ++D V+   + +   +S K     D 
Sbjct: 433 PNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKL----DE 488

Query: 667 SQRIAEGI 674
           +  I EG+
Sbjct: 489 AVEIVEGM 496


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/635 (24%), Positives = 293/635 (46%), Gaps = 34/635 (5%)

Query: 31  CYQTHHHNFLANSKQPAFSSTSSSPSPPQ---------SLVKTVCSMVLESYYQQFHLRS 81
           C++  HHN L  +   + ++   +P P            L + + S ++    +   LR 
Sbjct: 15  CHRMFHHNRLCTTATSSAAAGEIAPDPAAYETTVGVEYDLAQELRSHLVRDTCRLLELRD 74

Query: 82  S-PPRLNLQID--IDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIV 138
           S   +L  Q+   + +LT  Q +  V     +  +  A  FF WA    K+RH   ++  
Sbjct: 75  SWSAKLEAQLRHFLRALTPSQ-VRAVLRAQAQRDARAAFEFFRWADRQWKYRHAPEVFDE 133

Query: 139 CATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNG 183
               L      + A  V++ M+                S++  G+L+    ++  M  +G
Sbjct: 134 MLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDG 193

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                   N  V +    G V+ A E  + M   GV  D  +Y  ++   C   R+ EA 
Sbjct: 194 CAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEAL 253

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVL 302
             + +ML  G   D  +   +++  C +     + + + LLE M    G  P+  T+ +L
Sbjct: 254 EMIGSMLQNGCPPDKISYFTVMSFLCKEK---RVAEVWNLLERMRNDAGIFPDQITYNML 310

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I GL K G  ++A   FL+      ++ +   Y+A++  +C   +M+ A+ ++  M  +G
Sbjct: 311 IHGLAKHGHADEAL-TFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKG 369

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY++++ G C++G  ++A  +M  M K GC PN   + A+++GLCK G+  EA+
Sbjct: 370 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAW 429

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL K+ +       ITY++++    ++ +  ++  +  +M++ G  P       LI A 
Sbjct: 430 ELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHAL 489

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+++K   ++ F ++  + G F     +T++I G+ R G++ SA+     M      PD 
Sbjct: 490 CKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDV 549

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY  ++  L ++ K+ EA    E M+ +G+ P  VT  T+ + YC++G     + +L+ 
Sbjct: 550 VTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDK 609

Query: 603 -LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            L K+ +    N +I KLC+  ++  A     K+L
Sbjct: 610 MLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVL 644



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 24/386 (6%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS- 161
           ++  LA    +  AL+F   + G  +FR     Y     S   NG    A E++  M+S 
Sbjct: 310 LIHGLAKHGHADEALTFLRESEG-KRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISK 368

Query: 162 --------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                          F  IG L +   M+  M  NG    T T   ++   C++G    A
Sbjct: 369 GCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEA 428

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            E+ ++           +Y +++  + R G++ E+   +  ML +G       + LLI A
Sbjct: 429 WELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHA 488

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C +       +A + +E+   KG   NV   T +I G  ++G  E A  L   +  + N
Sbjct: 489 LCKEQ---KPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLT-N 544

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V TYT ++    ++ KM  A  L+E+M  +GLLP   TY ++I+ +C+ G  E   
Sbjct: 545 RHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLL 604

Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           +L+D ++ K+G +    AYN +I+ LC  G++ EAY LL K  +   + D  T  IL+  
Sbjct: 605 NLLDKMLTKQGFSS---AYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDS 661

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDI 472
            L +    Q+  + CRM +  L PD+
Sbjct: 662 FLNRGLPLQSYNVACRMFQRNLIPDL 687


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 220/458 (48%), Gaps = 5/458 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  +  + +E + ++ EM   G        N V+        +E A EV+  M   G
Sbjct: 16  IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +++    ++G++ E+ + LS M+ RG        + L+ A   K  R  + 
Sbjct: 76  YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALA-KARR--VD 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM+R G  P+      LI GLC+ G  + A   F ++ +    +PNV  Y  +
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH-GCQPNVPVYNVL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C   ++ +A  L   MK     P+  TY +L+   CK    E    L + M   G 
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  ++ +I GLC+ G +++A E+     +   + +K TYT L+S   +  +  QA  
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-AITAGLFPTKETYTSMICGY 517
           LF +M +A + PD  AY +LIA +C++  M E+EK ++E +  AGL PT  T+ ++I G+
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A +    M   G A D+ TY  LI+GL + +KLDEA + Y+ M  K      
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
           V+ V+     CK G+   A  + E+  K   +    T 
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 469



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 214/457 (46%), Gaps = 25/457 (5%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           + N E+A EV Q MV S         G+           P   S    + G+A ++G ++
Sbjct: 58  SNNMEKAREVYQHMVES---------GYK----------PDNVSYHILIHGLA-KIGKLD 97

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            + ++  EM  RG      +Y  +V A  +  RV  A      M+  G   D      LI
Sbjct: 98  ESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELI 157

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C  G    +K A E  ++M + G +PNV  + VL+ GLC  G  E+A  LF ++ +S
Sbjct: 158 LGLCQAG---KVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-KS 213

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            +  P+V TY  ++   CK  ++     L E M+  G +PN  T+++LI+G C+ G  E+
Sbjct: 214 HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEK 273

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A ++   M + GC PN Y Y  +I GLC+  +V +A EL +K  Q  +  D + Y  L++
Sbjct: 274 ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333

Query: 446 EHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
            + K+    +A  L+  M   AGL P I  + TLI  FC+  K+  + +   E  T GL 
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 393

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
               TY  +I G  R   +  A++ +++M +     D ++  + + GLCK   +D+A   
Sbjct: 394 ADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAV 453

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +E+    G  P   T   L+    K G    A  ++E
Sbjct: 454 FEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 188/384 (48%), Gaps = 9/384 (2%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++++++LEEM+  G  P+V+    ++ G  +    EKA  ++  +V S  YKP+  +Y  
Sbjct: 27  EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES-GYKPDNVSYHI 85

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G  K  K++ +  +L  M  +G  P+   Y+SL+    K    + A  L D M + G
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+   +  +I GLC+ G+V++A E  K+  +   Q +   Y +LL       + +QA 
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M     +PD+  Y TL+ A C+ ++++E  K F+    AG  P   T++++I G 
Sbjct: 206 TLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGL 265

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G +  A++ F  M + GC P+  TY  LISGLC+  K+ +A + +E M    I P  
Sbjct: 266 CRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDA 325

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK----KLWIRTVNTLIRKLCSEKRVGMA----A 629
           V   +L   YCK+G    A  +   +      +  I T NTLI   C   ++G A    A
Sbjct: 326 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 385

Query: 630 LFFHKLLGKDQNVDRVSLAALKNA 653
               K L  D    R+ +A L  A
Sbjct: 386 EMGTKGLAADSCTYRILIAGLSRA 409



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 5/341 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G++K+      +M  +G        N ++   C  G +E A  +F EM +  
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++ A C+  RV E  +   AM   G + +  T + LI   C  G    ++
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG---ELE 272

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+   M+  G KPN YT+T LI GLC+     +A  LF K+ ++    P+   Y ++
Sbjct: 273 KALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA-CIPPDAVAYNSL 331

Query: 339 ISGYCKEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           I+GYCK   M+ AE L   M    GL P   T+ +LI G CK+G   RA +L+  MG +G
Sbjct: 332 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 391

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              +   Y  +I GL +  ++ EA E+ K+  +++   D ++    +    K     QA 
Sbjct: 392 LAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 451

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            +F    K+G  P+   +  L  +  +  ++++++K  + A
Sbjct: 452 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 492



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 3/316 (0%)

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R  N   NV TY+++I    KE K   +  +LE M   G  P+   +  ++ G  +  N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E+A ++   M + G  P+  +Y+ +I GL K G++ E+ ++L +   R        Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K      A  LF  M++ G +PD   +  LI   C+  K+K++ + F++    G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    Y  ++ G    G +  A   F  M    C+PD +TY  L+  +CK  +++E C
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
           + +E+M   G  P  +T  TL +  C+ G+   A+ +  S+ +   K    T  TLI  L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 620 CSEKRVGMAALFFHKL 635
           C  ++V  A   F K+
Sbjct: 301 CRAEKVIQARELFEKM 316



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 38/304 (12%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+L++  ++  EM ++       T N ++   C+   VE   ++F+ M A G   +  ++
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G + +A     +ML+ G   +  T T LI+  C       + QA EL E+
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE---KVIQARELFEK 315

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +    P+   +  LI G CK+G  ++A +L+ ++      +P + T+  +I G+CK  
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 375

Query: 347 KMNRAEMLLERMKEQGLLPNTNTY-----------------------------------T 371
           K+ RA  L+  M  +GL  ++ TY                                    
Sbjct: 376 KLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 435

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           S + G CK GN ++AY + +   K G  PN   +  + + L K GRV++A +L++ A  R
Sbjct: 436 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495

Query: 432 ELQA 435
           ++ A
Sbjct: 496 DITA 499


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 237/498 (47%), Gaps = 16/498 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  +G+     T N +V   C+   V  A ++ DEM  +G   D  +Y  +V   C++ 
Sbjct: 153 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 212

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R+ EA   L+AM    A     +   ++ A C + FR  +++ F ++ +MV +G +PNV 
Sbjct: 213 RLDEATEVLAAMPPVAA-----SYNAIVLALC-REFR--MQEVFSVVSDMVGRGLQPNVI 264

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+T ++D  CK G    A  +  ++V +    PNV T+TA++ G   + +++ A  +   
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVIT-GCTPNVVTFTALVRGLFDDGRVHDALDMWRW 323

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G  P+T +Y  LI G C VG+ + A  +++ M + GC PN+  Y+ +IDG  K G 
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 383

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A  +     +   + + + YT ++    K+    QA  L  +M+     P+   + T
Sbjct: 384 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 443

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI + C  +++  +   F E    G  P   TY  +I G  R+GN   A+     M   G
Sbjct: 444 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 503

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
                +TY  ++SGLC+     EA  F   MI +GI P   T   + + YCK+G+   A 
Sbjct: 504 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 563

Query: 598 IILESLD-----KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +L +++     + + + T+  L+ +LC++ ++  A  +  K+L +    + V+   L  
Sbjct: 564 WMLGAMNVVNCHRNILVYTI--LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621

Query: 653 ACYESNKYALFSDLSQRI 670
             + +      SD  Q I
Sbjct: 622 GVFRNLGCIEPSDFIQHI 639



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 203/456 (44%), Gaps = 44/456 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  +  R+     M+ EM   G P    T   +V + C+L  ++ A EV   M    
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV- 227

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               A+SY  +V+A CR  R+ E    +S M+ RG   +  T T ++ AFC     G ++
Sbjct: 228 ----AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA---GELR 280

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L  MV  G  PNV T T L+ GL   G    A  ++  +V ++ + P+  +Y  +
Sbjct: 281 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV-AEGWAPSTVSYNIL 339

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C    +  A  +L  M++ G  PN  TY++LI G  K G+   A  + + M + GC
Sbjct: 340 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 399

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  Y  ++D  CKK    +A  L+ K        + +T+  L+          +ALG
Sbjct: 400 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALG 459

Query: 459 LFCRMVKAGLNPD-------IHA----------------------------YTTLIAAFC 483
           +F  M + G  P+       IH                             Y T+++  C
Sbjct: 460 VFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC 519

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +  +E+  F  + I  G+ P   T++++I  Y ++G +  A      MN + C  + +
Sbjct: 520 QTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 579

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            Y  L++ LC Q KL +A  +   M+ +GI P  VT
Sbjct: 580 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 615



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 221/516 (42%), Gaps = 24/516 (4%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVE 205
           G+  RAHE     V   A  G + +G  + + EM   G+P     L   VG     G  +
Sbjct: 52  GDAARAHEAA---VRRLAAAGDV-DGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPD 107

Query: 206 YAEEVF-----DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            A + F     D  CAR    +   Y  ++ A  R   V         M   G   +  T
Sbjct: 108 RALKTFYRAVHDLGCARPT--EPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFT 165

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             LL+ A C     G+ ++   +L+EM RKG  P+  T+  ++  LCK    ++A  +  
Sbjct: 166 YNLLVRALCQNNRVGAARK---MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA 222

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
            +       P   +Y A++   C+E +M     ++  M  +GL PN  TYT+++   CK 
Sbjct: 223 AM------PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA 276

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A  ++  M   GCTPN+  + A++ GL   GRV +A ++ +           ++Y
Sbjct: 277 GELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSY 336

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            IL+       + K A  +   M + G  P++  Y+TLI  F +   +  +   + +   
Sbjct: 337 NILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSR 396

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +G  P    YT+M+  + +    + A     +M    C P+ +T+  LI  LC   ++  
Sbjct: 397 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 456

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIR 617
           A   +  M   G  P   T   L +   ++G+   A+ +   ++S   +L + T NT++ 
Sbjct: 457 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 516

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            LC  +    A +F  K++ +    +  + +A+ +A
Sbjct: 517 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 10/434 (2%)

Query: 93  DSLTHEQAITVVASLA--NEA----GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISN 146
           D +T+   ++V+  L   +EA     +M  ++  Y AI  A  R F    +    S +  
Sbjct: 197 DDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVG 256

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
              +        +V +F + G L+   +++  M   G      T   +V    + G V  
Sbjct: 257 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 316

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +++  M A G      SY +++   C +G +  A   L++M   G   +  T + LI 
Sbjct: 317 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 376

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G  G    A  +  +M R G KPNV  +T ++D  CKK    +A  L  K++  +
Sbjct: 377 GFSKAGDLGG---AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL-E 432

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  PN  T+  +I   C   ++ RA  +   M+  G +PN  TY  LI+G  + GN   A
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++  M   G   ++  YN ++ GLC+    +EA   + K   + +Q +  T++ ++  
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K+ E + A  +   M     + +I  YT L+A  C Q K+ ++  +  + +  G++P 
Sbjct: 553 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 612

Query: 507 KETYTSMICGYLRD 520
             T+  ++ G  R+
Sbjct: 613 TVTWNVLVRGVFRN 626


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 200/414 (48%), Gaps = 29/414 (7%)

Query: 185 PLITSTL-NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           P I+S L   ++ +  + G +E A   F++M  +G+  + + +  ++ +  +  +  E  
Sbjct: 79  PKISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVK-SKCFEK- 136

Query: 244 RWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            W      +G I LD  T  ++I   C+ G      + FELL ++ + G  PNV  +T L
Sbjct: 137 LWFVFNEVKGKIELDVYTYGIMIKGCCEAGV---FYKGFELLTDLEKMGLSPNVVIYTTL 193

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG CK G   +A  LF K+    N   N +TYT +I+G+ K+        L E+M+  G
Sbjct: 194 IDGCCKNGDVRRAKLLFNKMGEV-NLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDG 252

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA- 421
           + PN  TY  +I   C  G   +AY+L D M K G   N+  YN +I GLC+K R+ EA 
Sbjct: 253 VFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAE 312

Query: 422 --------------------YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
                                +L+++  +R +   K+TYTIL + H++  + ++A   + 
Sbjct: 313 KLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYS 372

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M K GL PD+H Y  L+   C +  MKE+ K F+      L P +  Y +MI GY + G
Sbjct: 373 SMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAG 432

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           N   A+++ + M      P+  +Y + I  LCK  K  EA      M G G+ P
Sbjct: 433 NSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEP 486



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 192/389 (49%), Gaps = 30/389 (7%)

Query: 275 GSIKQAFELLEEMVRKG--WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           GSI+ A     +MV KG  ++PN++    L+D L K    EK + +F ++      + +V
Sbjct: 97  GSIELAVLYFNQMVDKGLVFEPNIFN--TLLDSLVKSKCFEKLWFVFNEV--KGKIELDV 152

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +TY  MI G C+     +   LL  +++ GL PN   YT+LI G CK G+  RA  L + 
Sbjct: 153 YTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNK 212

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           MG+     N Y Y  +I+G  KKG  ++ +EL +K     +  +  TY  +++E   + +
Sbjct: 213 MGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGK 272

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG---------- 502
             +A  LF  M K G+  ++  Y TLI+  CR+ ++ E+EK   +   AG          
Sbjct: 273 LHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDV 332

Query: 503 -----------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                      + P+K TYT +   ++R G++  A  ++  M ++G  PD   YG L+ G
Sbjct: 333 TDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHG 392

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LC +  + EA + + SM    + P EV   T+   YCK G+S  A+  L+ ++ K  +  
Sbjct: 393 LCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPN 452

Query: 612 V---NTLIRKLCSEKRVGMAALFFHKLLG 637
           V   ++ I  LC + +   A +  +K+ G
Sbjct: 453 VASYSSTIGILCKDGKWQEAEILLNKMRG 481



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 171/356 (48%), Gaps = 36/356 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G+     E+  ++   G+  +   Y  ++   C+ G V  A    + M +   + + 
Sbjct: 163 CEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQ 222

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T+LI  F  KG R   K  FEL E+M   G  PN+YT+  +I+  C +G   KA+ L
Sbjct: 223 YTYTVLINGFFKKGLR---KDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYEL 279

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK------------------- 359
           F ++ +      NV TY  +ISG C++ ++  AE L+++MK                   
Sbjct: 280 FDEMCKR-GVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVRE 338

Query: 360 --EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
             E+G+ P+  TYT L   H ++G+ E+A+     M K G  P+++ Y  ++ GLC KG 
Sbjct: 339 MEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGN 398

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++EA +L +   + +L+ +++ Y  +++ + K   + +AL     M    L P++ +Y++
Sbjct: 399 MKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSS 458

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            I   C+  K +E+E    +   +GL P+   Y           NI S  KY + +
Sbjct: 459 TIGILCKDGKWQEAEILLNKMRGSGLEPSVSIY-----------NIISKAKYSKEL 503


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 268/581 (46%), Gaps = 60/581 (10%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV 176
            SFF ++I         R Y     S+   GNF  ++E        F  +  L + FS+ 
Sbjct: 16  FSFFAYSIA-------PRHYSTNTCSISVKGNFGVSNE--------FENVKCLDDAFSLF 60

Query: 177 IEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            +M T   LP   S  ++++     +        +F E+    +  DA +   +V + C 
Sbjct: 61  RQMVTTKPLPSAVS-FSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCL 119

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KP 294
           M R       L+    +G   +  T T LI     +     +K A  L +++VR+   +P
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAEN---KVKDAVHLFKKLVRENICEP 176

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +   +  ++DGLCKKG T+KAF L L+L+     KP+   Y  +I  +CK+  ++ A  L
Sbjct: 177 DEVMYGTVMDGLCKKGHTQKAFDL-LRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L  MK++ + P+  TYTSLI G  K+  +E+   L   M      P++  +N++IDGLCK
Sbjct: 236 LNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G+V++A E++    ++ ++ ++ITY +++  +  + +  +A  +F  M+  G+ PDI +
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355

Query: 475 YTTLIAAFCRQKKMKESEK-----------------------------------FFQEAI 499
           YT LI  +  +KKM ++ +                                   FF E  
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQ 415

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            AG  P   T+ +++ GY ++G +  A+ +F ++ +     +   Y A+I+GLCK  KLD
Sbjct: 416 AAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD 475

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLI 616
           +A   +E +   G+ P  +T   +   YC++G    A  +L  ++    +   RT N ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIV 535

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           R      +V     F  ++ GK  + +  ++  L +   E 
Sbjct: 536 RGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAED 576



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 220/480 (45%), Gaps = 43/480 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEM 214
           +  +V+S   + R   GFS++      G+P    T   ++ G+  E   V+ A  +F ++
Sbjct: 110 LSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAE-NKVKDAVHLFKKL 168

Query: 215 CARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
               +C  D   Y  ++   C+ G   +A   L  M       D     ++I AFC  G 
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM 228

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +  A  LL EM +K   P++ T+T LIDGL K    EK   LFL+++  + Y P+V 
Sbjct: 229 ---LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY-PDVC 284

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+ ++I G CKE K+  AE ++  M E+G+ PN  TY  ++ G+C  G   RA  + D M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSM 344

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G  P+I +Y A+I+G  +K ++ +A +L ++  Q  L+   +T ++LL    +   T
Sbjct: 345 IDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRT 404

Query: 454 KQALGLFCRMVKAGLNPD-----------------------------------IHAYTTL 478
           + A   F  M  AG  P+                                   I  YT +
Sbjct: 405 ECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C+  K+ ++   F++    GL P   TYT+MI GY ++G +  A    ++M   GC
Sbjct: 465 INGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PDN TY  ++ G  + SK+ E   F + + GK  S  E   V L  +   +  S   MI
Sbjct: 525 LPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFS-FEAATVELLMDIIAEDPSLLNMI 583


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 23/382 (6%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L  +M   G  PN+YT  +LI+  C       AF +  K+++   ++P+  T+T +I 
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL-GHQPDTATFTTLIR 139

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G C E K+  A  L ++M  +G  P+  TY +LI G CKVGN   A  L+  M ++ C P
Sbjct: 140 GICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 199

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N++AYN IID LCK  +V EA+ L  +   + +  D  TY  L+       E K    L 
Sbjct: 200 NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL 259

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV + + PD+ ++ T++ A C++ K+ E+     + I  G+ P   TYT+++ G+   
Sbjct: 260 NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLL 319

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK-------------------LDEA 561
             +  AVK F  M   GC P+ I+Y  LI+G CK  +                   +DEA
Sbjct: 320 SEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEA 379

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRK 618
            + +++M+ KG  P  ++  TL   YCK      AM +   + ++  I    T +TLI  
Sbjct: 380 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 439

Query: 619 LCSEKRVGMAALFFHKLLGKDQ 640
           LC  +R+  A   FH+++   Q
Sbjct: 440 LCHVERLQDAIALFHEMVACSQ 461



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 226/502 (45%), Gaps = 58/502 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++SF  + R+   FS++ ++   G    T+T   ++   C  G +  A  +FD+M 
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   D  +Y  ++   C++G  + A R L +M+ +    +      +I + C      
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR--- 215

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLI-------------------------------- 303
            + +AF L  EMV KG  P+++T+  LI                                
Sbjct: 216 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 275

Query: 304 ---DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
              D LCK+G   +A  +  K+++    +PNV TYTA++ G+C   +M+ A  + + M  
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQR-GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334

Query: 361 QGLLPNTNTYTSLIYGHCKVG-------------------NFERAYDLMDLMGKEGCTPN 401
           +G +PN  +Y +LI G+CK+                    N + A  + D M  +GC PN
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPN 394

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           + +YN +I+G CK  R+ +A  L  +  ++EL  D +TY+ L+         + A+ LF 
Sbjct: 395 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 454

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            MV     P++  Y  L+   C+ + + E+    +    + L P  +     I G  R G
Sbjct: 455 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 514

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            + +A   F  ++  G  PD  TY  +I+GLC++  LDEA + +  M   G +       
Sbjct: 515 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 574

Query: 582 TLAYEYCKQGDSATAMIILESL 603
           T+   + +  +++ A+ +L+ +
Sbjct: 575 TITRGFLRNNETSRAIQLLQEM 596



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 200/435 (45%), Gaps = 23/435 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   ++G       ++  M            N ++   C+   V  A  +F EM  +G
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++ A C +         L+ M+D   + D  +   ++ A C +G    + 
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG---KVT 288

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +++++M+++G +PNV T+T L+DG C     ++A ++F  +V      PNV +Y  +
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV-CKGCMPNVISYNTL 347

Query: 339 ISGYCKEEK-------------------MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           I+GYCK ++                   M+ A  + + M  +G +PN  +Y +LI G+CK
Sbjct: 348 INGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 407

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           +   ++A  L   M ++   P+   Y+ +I GLC   R+Q+A  L  +        + +T
Sbjct: 408 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 467

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y ILL    K     +A+ L   +  + L+PDI      I   CR  +++ +   F    
Sbjct: 468 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 527

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           + GL P   TY+ MI G  R G +  A K F+ M++ GC  +   Y  +  G  + ++  
Sbjct: 528 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 587

Query: 560 EACQFYESMIGKGIS 574
            A Q  + M+ +G S
Sbjct: 588 RAIQLLQEMVARGFS 602



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 247/591 (41%), Gaps = 61/591 (10%)

Query: 12  LRGKPSRTPSLTLF--VIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPP-----QSLVKT 64
           LR +P   PS   F  ++ S+    HH   L+ S Q       S   PP       L+ +
Sbjct: 53  LRMQPP--PSTVDFNKLLTSIAKMKHHSTLLSLSHQ-----MDSFGIPPNIYTLHILINS 105

Query: 65  VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
            C +    +   F + +   +L  Q D  + T     T++  +  E     AL  F   I
Sbjct: 106 FCHLNRVGF--AFSVLAKILKLGHQPDTATFT-----TLIRGICVEGKIGEALHLFDKMI 158

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRL 169
           G   FR  +  Y      L   GN   A  ++  MV                S  +  ++
Sbjct: 159 G-EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
            E F++  EM   G+     T N ++   C L   ++   + +EM    +  D  S+  +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           V A C+ G+VTEA   +  M+ RG   +  T T L+   C       + +A ++ + MV 
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC---LLSEMDEAVKVFDTMVC 334

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAF-------------------RLFLKLVRSDNYKP 330
           KG  PNV ++  LI+G CK    +KA                    ++F  +V      P
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV-CKGCMP 393

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV +Y  +I+GYCK +++++A  L   M  Q L+P+T TY++LI+G C V   + A  L 
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M      PN+  Y  ++D LCK   + EA  LLK      L  D     I +    + 
Sbjct: 454 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 513

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            E + A  LF  +   GL PD+  Y+ +I   CR+  + E+ K F+E    G       Y
Sbjct: 514 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 573

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            ++  G+LR+   S A++  Q M   G + D  T    +  L     LD++
Sbjct: 574 NTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML-SDDGLDQS 623


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 221/451 (49%), Gaps = 16/451 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G L+   S+  +M   G      T N ++    +LGL++    +F++M    
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +C+  R+ +A  +L  M   G   +  T +  I AFC +G    ++
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM---LQ 178

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +   +M R    PN +T+T LID  CK G   +A +L  +++++   K NV TYTA+
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLNVVTYTAL 237

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+E +M  AE +   M   G+ PN  TYT+L++G  K    E A D++  M ++  
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  I+ GLC + R++EA  L+ +  +  +  + + YT L+  + K  +  +AL 
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+             L+   C+    + ++K F E +  G+ P K  YT++I G +
Sbjct: 358 LLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 405

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A+    RM +IG   D   Y ALI GL    ++ +A    + MIGKG+ P EV
Sbjct: 406 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 465

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
             + L  +Y   G    A+ +   + K+  I
Sbjct: 466 VYMCLIKKYYALGKVDEALELQNEMAKRGMI 496



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 197/377 (52%), Gaps = 12/377 (3%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           RG + + F   ++M   G K +V+T+ ++ID LCK+G  E A  LF ++ +   + P++ 
Sbjct: 36  RGDLSRKF--FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIV 92

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY ++I G+ K   ++    + E+MK+    P+  TY +LI   CK     +A++ +  M
Sbjct: 93  TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 152

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  PN+  Y+  ID  CK+G +QEA +      +  L  ++ TYT L+  + K    
Sbjct: 153 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 212

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +AL L   +++AG+  ++  YT L+   C + +MKE+E+ F+  + AG+ P +ETYT++
Sbjct: 213 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 272

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G+++   +  A    + M +    PD + YG ++ GLC +S+L+EA      +   GI
Sbjct: 273 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 332

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           +   V   TL   Y K G +  A+ +LE +     +  V+ L +  C E    +A   F 
Sbjct: 333 NTNAVIYTTLMDAYFKSGQATEALTLLEEM-----LDLVDGLCKNNCFE----VAKKLFD 383

Query: 634 KLLGKDQNVDRVSLAAL 650
           ++L K    D+++  AL
Sbjct: 384 EMLDKGMMPDKIAYTAL 400



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 208/456 (45%), Gaps = 42/456 (9%)

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFA 164
           F+  +G A  +  +  Y +    L   G+ E A  +   M               +    
Sbjct: 43  FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 102

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++G L E   +  +M +        T N ++   C+   +  A E   EM A G+  +  
Sbjct: 103 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 162

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y   + A+C+ G + EA ++   M       +  T T LI A C  G   ++ +A +L+
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG---NLAEALKLV 219

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           EE+++ G K NV T+T L+DGLC++G  ++A  +F  ++ +    PN  TYTA++ G+ K
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA-GVAPNQETYTALVHGFIK 278

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            ++M  A+ +L+ MKE+ + P+   Y ++++G C     E A  L+  + + G   N   
Sbjct: 279 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 338

Query: 405 YNAIIDGLCKKGRVQEA-------------------YELLKKAFQRELQ----ADKITYT 441
           Y  ++D   K G+  EA                   +E+ KK F   L      DKI YT
Sbjct: 339 YTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 398

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  ++K    ++AL L  RM++ G+  D+HAYT LI       +++++     E I  
Sbjct: 399 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 458

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           G+ P +  Y  +I  Y   G +  A++    M + G
Sbjct: 459 GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 38/346 (10%)

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           R F K + +   K +V TY  MI   CKE  +  A  L  +MKE G  P+  TY SLI G
Sbjct: 41  RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 100

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           H K+G  +    + + M    C P++  YNA+I+  CK  R+ +A+E     F  E++A+
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFE-----FLHEMKAN 155

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
                                         GL P++  Y+T I AFC++  ++E+ KFF 
Sbjct: 156 ------------------------------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +     L P + TYTS+I    + GN++ A+K  + + Q G   + +TY AL+ GLC++ 
Sbjct: 186 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 245

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           ++ EA + + +M+  G++P + T   L + + K  +   A  IL+ + +K     +    
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           T++  LC+E R+  A L   ++     N + V    L +A ++S +
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 351



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           +FP   +  +++    + G    + K+F+ M   G      TY  +I  LCK+  L+ A 
Sbjct: 17  VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 76

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKL 619
             +  M   G +P  VT  +L   + K G     + I E +   D    + T N LI   
Sbjct: 77  SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 136

Query: 620 CSEKRVGMAALFFHKL 635
           C  +R+  A  F H++
Sbjct: 137 CKFERMPKAFEFLHEM 152


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 273/614 (44%), Gaps = 29/614 (4%)

Query: 52  SSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEA 111
           SSSP  P  L   +  + L+        R +P R +L      ++H Q + ++A  A   
Sbjct: 64  SSSPLTPALLQAALRRVRLDPDAALHLFRLAPSRPSL------VSHAQLLHILAR-ARRF 116

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKE 171
               AL           F H   +Y     S +S     RAH          A+ G+L  
Sbjct: 117 HDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAH----------ADAGQLSS 166

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
             ++   M   G      + NR++    + G    A  V+ +M   GV  D  +  +M  
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
           AYCR GRV +A  ++  M   G  ++      ++  +C  G+    + A  +LE + RKG
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW---TEDARRILESLQRKG 283

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV T+T+L+ G CK G  E+A R+  ++  + +   +   Y  MI+GYC+  +M+ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +   M++ G+  N   Y ++I G CK+G  E    ++  M   G  P+ Y+YN +IDG
Sbjct: 344 TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDG 403

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            C++G +++A+E+ +   +  L A  +TY  LL           AL L+  M+K G+ P+
Sbjct: 404 YCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPN 463

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
             + +TL+    +  K +++   ++E +  GL     T+ ++I G  + G ++ A +   
Sbjct: 464 EISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD 523

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE------VTRVTLAY 585
           RM ++ C PD++TY  L  G CK  +L  A      M   G +P        +T   +A 
Sbjct: 524 RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAK 583

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           ++ K  D  + M     L   L   T   LI   C E  +  A   + +++    N +  
Sbjct: 584 QWHKVNDIHSEMSA-RGLSPNLV--TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 646 SLAALKNACYESNK 659
             +AL +  Y+  K
Sbjct: 641 ICSALMSCFYKEGK 654



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 33/495 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ + + GR+ +   +  EM + G+ +     N ++   C+LG +E  ++V  EM   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++  YCR G + +A      M+  G      T   L+  FC      +I 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS---LHAID 446

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L   M+++G  PN  + + L+DGL K G TE+A  L+ K   +     NV T+  +
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLW-KETLARGLAKNVITFNTV 505

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  +M  AE LL+RMKE    P++ TY +L  G+CK+G    A  LM+ M   G 
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  +N+ I G     +  +  ++  +   R L  + +TY  L++   K+    +A  
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP------------- 505
           L+  MV  G+NP++   + L++ F ++ K+ E+    Q+ +   + P             
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 506 -------------TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
                            +  +I G  + G I+ A   F+ +      PDN TY +LI G 
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
                +DEA    + M+  G++P  +T  +L Y  CK G  + A+ +   L  K      
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 611 -TVNTLIRKLCSEKR 624
            T NTLI + C E +
Sbjct: 806 ITYNTLIDEYCKEGK 820



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 232/541 (42%), Gaps = 58/541 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M  ++   GR+ +    V EM   GL +     + V+   C +G  E A  + + +  +G
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSI 277
           +  +  +Y L+V  YC+ GR+ EA+R +  M + G I+ D     ++I  +C    RG +
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ---RGRM 340

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  +  EM   G   N++ +  +I+GLCK G  E+  ++ L+ +     +P+ ++Y  
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV-LQEMEDVGMRPDKYSYNT 399

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYC+E  M +A  +   M   GL   T TY +L+ G C +   + A  L  LM K G
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG 459

Query: 398 CTPN-----------------------------------IYAYNAIIDGLCKKGRVQEAY 422
             PN                                   +  +N +I+GLCK GR+ EA 
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL +  +     D +TY  L   + K  +   A  L  +M   G  P +  + + I   
Sbjct: 520 ELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGH 579

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
              K+  +      E    GL P   TY ++I G+ ++GN+  A   +  M   G  P+ 
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639

Query: 543 ITYGALISGLCKQSKLDEACQFYESMI------GKGISPCEVTRVTLAYEYCKQGDSATA 596
               AL+S   K+ K+DEA    + ++      G  IS  E+ +++   +    G+  +A
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            +        +W    N +I  LC   R+  A   F  L  K    D  + ++L + C  
Sbjct: 700 NV--------MW----NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAA 747

Query: 657 S 657
           S
Sbjct: 748 S 748



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 15/435 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+ ++  ++  E    GL     T N V+   C++G +  AEE+ D M    
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGFRGSI 277
              D+ +Y+ +   YC++G++  A   ++ M   G           IT  F  K +    
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH--- 586

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +  ++  EM  +G  PN+ T+  LI G CK+G   +A  L+ ++V ++   PNV   +A
Sbjct: 587 -KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV-NNGMNPNVFICSA 644

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++S + KE K++ A ++L+++    ++P  +  T  I         ++   ++D +    
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI---------DKISHVVDTIADGN 695

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
                  +N II GLCK GR+ +A  L +    +    D  TY+ L+          +A 
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+ AGL P+I  Y +LI   C+  K+  +   F +  + G+ P   TY ++I  Y
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G  + A K  Q+M + G  P  ITY  LI GLC Q  ++EA +  + MI   + P  
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNY 875

Query: 578 VTRVTLAYEYCKQGD 592
           +T  TL + Y K G+
Sbjct: 876 ITYCTLIHGYIKSGN 890



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 18/270 (6%)

Query: 147 GNFERAHEVMQCMVS---------SFAEIGRLKEGFSMVIEMTNNGLPLITSTL-NRVVG 196
           G  + A+ V+Q +V+         S  EI ++    S V++   +G P   + + N ++ 
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKI----SHVVDTIADGNPHSANVMWNVIIF 708

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C+ G +  A+ +F+ +  +    D  +Y  ++      G + EA      ML  G   
Sbjct: 709 GLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTP 768

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +  T   LI   C  G    + +A  L  ++  KG  PN  T+  LID  CK+G T +AF
Sbjct: 769 NIITYNSLIYGLCKSG---KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           +L  K+V  +  +P V TY+ +I G C +  M  A  LL++M E  + PN  TY +LI+G
Sbjct: 826 KLKQKMV-EEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           + K GN E    L D M   G  P  +  N
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 15/243 (6%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I++GN   A+ +   ++    + GR+ +  S+   + N        T + ++      G 
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  + D M + G+  +  +Y  ++   C+ G+++ A    + +  +G   +  T   
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +C +   G   +AF+L ++MV +G +P V T+++LI GLC +G+ E+A +L  +++
Sbjct: 811 LIDEYCKE---GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMI 867

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +N  PN  TY  +I GY K   M     L + M  +GLLP TN           +GN+
Sbjct: 868 -ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP-TNW----------IGNW 915

Query: 384 ERA 386
           +R+
Sbjct: 916 KRS 918


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 273/614 (44%), Gaps = 29/614 (4%)

Query: 52  SSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEA 111
           SSSP  P  L   +  + L+        R +P R +L      ++H Q + ++A  A   
Sbjct: 64  SSSPLTPALLQAALRRVRLDPDAALHLFRLAPSRPSL------VSHAQLLHILAR-ARRF 116

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKE 171
               AL           F H   +Y     S +S     RAH          A+ G+L  
Sbjct: 117 HDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAH----------ADAGQLSS 166

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
             ++   M   G      + NR++    + G    A  V+ +M   GV  D  +  +M  
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
           AYCR GRV +A  ++  M   G  ++      ++  +C  G+    + A  +LE + RKG
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW---TEDARRILESLQRKG 283

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV T+T+L+ G CK G  E+A R+  ++  + +   +   Y  MI+GYC+  +M+ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +   M++ G+  N   Y ++I G CK+G  E    ++  M   G  P+ Y+YN +IDG
Sbjct: 344 TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDG 403

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            C++G +++A+E+ +   +  L A  +TY  LL           AL L+  M+K G+ P+
Sbjct: 404 YCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPN 463

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
             + +TL+    +  K +++   ++E +  GL     T+ ++I G  + G ++ A +   
Sbjct: 464 EISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD 523

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE------VTRVTLAY 585
           RM ++ C PD++TY  L  G CK  +L  A      M   G +P        +T   +A 
Sbjct: 524 RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAK 583

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           ++ K  D  + M     L   L   T   LI   C E  +  A   + +++    N +  
Sbjct: 584 QWHKVNDIHSEMSA-RGLSPNLV--TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 646 SLAALKNACYESNK 659
             +AL +  Y+  K
Sbjct: 641 ICSALMSCFYKEGK 654



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 33/495 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ + + GR+ +   +  EM + G+ +     N ++   C+LG +E  ++V  EM   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++  YCR G + +A      M+  G      T   L+  FC      +I 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS---LHAID 446

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L   M+++G  PN  + + L+DGL K G TE+A  L+ K   +     NV T+  +
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLW-KETLARGLAKNVITFNTV 505

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK  +M  AE LL+RMKE    P++ TY +L  G+CK+G    A  LM+ M   G 
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  +N+ I G     +  +  ++  +   R L  + +TY  L++   K+    +A  
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP------------- 505
           L+  MV  G+NP++   + L++ F ++ K+ E+    Q+ +   + P             
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 506 -------------TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
                            +  +I G  + G I+ A   F+ +      PDN TY +LI G 
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
                +DEA    + M+  G++P  +T  +L Y  CK G  + A+ +   L  K      
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 611 -TVNTLIRKLCSEKR 624
            T NTLI + C E +
Sbjct: 806 ITYNTLIDEYCKEGK 820



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 232/541 (42%), Gaps = 58/541 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M  ++   GR+ +    V EM   GL +     + V+   C +G  E A  + + +  +G
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSI 277
           +  +  +Y L+V  YC+ GR+ EA+R +  M + G I+ D     ++I  +C    RG +
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ---RGRM 340

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  +  EM   G   N++ +  +I+GLCK G  E+  ++ L+ +     +P+ ++Y  
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV-LQEMEDVGMRPDKYSYNT 399

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYC+E  M +A  +   M   GL   T TY +L+ G C +   + A  L  LM K G
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG 459

Query: 398 CTPN-----------------------------------IYAYNAIIDGLCKKGRVQEAY 422
             PN                                   +  +N +I+GLCK GR+ EA 
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ELL +  +     D +TY  L   + K  +   A  L  +M   G  P +  + + I   
Sbjct: 520 ELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGH 579

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
              K+  +      E    GL P   TY ++I G+ ++GN+  A   +  M   G  P+ 
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639

Query: 543 ITYGALISGLCKQSKLDEACQFYESMI------GKGISPCEVTRVTLAYEYCKQGDSATA 596
               AL+S   K+ K+DEA    + ++      G  IS  E+ +++   +    G+  +A
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            +        +W    N +I  LC   R+  A   F  L  K    D  + ++L + C  
Sbjct: 700 NV--------MW----NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAA 747

Query: 657 S 657
           S
Sbjct: 748 S 748



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 196/434 (45%), Gaps = 31/434 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+ ++  ++  E    GL     T N V+   C++G +  AEE+ D M    
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGFRGSI 277
              D+ +Y+ +   YC++G++  A   ++ M   G           IT  F  K +    
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH--- 586

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +  ++  EM  +G  PN+ T+  LI G CK+G   +A  L+ ++V ++   PNV   +A
Sbjct: 587 -KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV-NNGMNPNVFICSA 644

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++S + KE K++ A ++L+++    ++P  +  T  I         ++   ++D +    
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI---------DKISHVVDTIADGN 695

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
                  +N II GLCK GR+ +A  L +    +    D  TY+ L+          +A 
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+ AGL P+I  Y +LI   C+  K+  +   F +  + G+ P   TY ++I  Y
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 518 LRDGNISSAVKYFQRMNQIG----------------CAPDNITYGALISGLCKQSKLDEA 561
            ++G  + A K  Q+M + G                  P+ ITY  LI G  K   ++E 
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875

Query: 562 CQFYESMIGKGISP 575
            + Y+ M  +G+ P
Sbjct: 876 SKLYDEMHIRGLLP 889



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 46/290 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLI-------------------TSTLNRVVGI- 197
           +++ + + G L E  ++  EM NNG+ P +                      L ++V I 
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 198 ---ACELGLVEYAE--EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
               C +  +E  +   V D +      +    + +++   C+ GR+ +A     ++ ++
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
             + DN T + LI      G   SI +AF L + M+  G  PN+ T+  LI GLCK G  
Sbjct: 730 RFLPDNFTYSSLIHGCAASG---SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK----------------MNRAEMLLE 356
            +A  LF KL +S    PN  TY  +I  YCKE K                M  A  LL+
Sbjct: 787 SRAVNLFNKL-QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +M E  + PN  TY +LI+G+ K GN E    L D M   G  P  +  N
Sbjct: 846 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 34/243 (13%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I++GN   A+ +   ++    + GR+ +  S+   + N        T + ++      G 
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  + D M + G+  +  +Y  ++   C+ G+++ A    + +  +G   +  T   
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI  +C +   G   +AF+L ++MV                   ++G+ E+A +L  +++
Sbjct: 811 LIDEYCKE---GKTTEAFKLKQKMV-------------------EEGYMEEAIKLLDQMI 848

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
             +N  PN  TY  +I GY K   M     L + M  +GLLP TN           +GN+
Sbjct: 849 -ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP-TNW----------IGNW 896

Query: 384 ERA 386
           +R+
Sbjct: 897 KRS 899


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 216/422 (51%), Gaps = 5/422 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+++G     EM+ +      +T   V+   C+  ++  A +VF++M  +G
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  + +  ++ EA + L  ML +G      T   ++  FC       I 
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM---IN 265

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E++ +M  +G +P ++  T L+     KG  E+A+++  ++  +    P+V  YT++
Sbjct: 266 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT-ARGCAPDVILYTSL 324

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I       ++  A  + + M E+G  P+  TY ++I    K+GN E A ++++LM K G 
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 384

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ +AYN+++DG  K  RV +A+ +  +     ++ + +T+ +L+    K  +T +A  
Sbjct: 385 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444

Query: 459 LFCRMV-KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           LF  M+ K  + P + +YT LI    +  ++ E+   FQE I  G+ P   TYTS+I   
Sbjct: 445 LFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSL 504

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G I  A K  + M ++G  PD   Y ALI+GL   S +D A   ++ M+ +G +P E
Sbjct: 505 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 564

Query: 578 VT 579
           VT
Sbjct: 565 VT 566



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 226/484 (46%), Gaps = 12/484 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  A I ++ E +     M +NG          ++   C+ G  +   ++ ++   R 
Sbjct: 13  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR- 71

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  ++  YC+ G +     +  A+  + A LD  + T +I    D      I 
Sbjct: 72  FRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPK-ASLDVISYTTVIKGLADSK---RID 125

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL EE+   G  PNV  +T +IDGL K G  E   + F ++  S +  P   TYT +
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS-SCVPTRTTYTVV 184

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK + +  A  + E+M ++G +P+T TYT+LI G  K    + A  L+D+M  +G 
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P    Y +I+ G CK   + EA E++ +  +R  +     +T LLS +L +   ++A  
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 304

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M   G  PD+  YT+LI       ++ E+   F   I  G  P   TY ++I  + 
Sbjct: 305 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 364

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+ +A +  + M + G  PD   Y +L+ G  K  ++D+A   Y+ M+  GI P  V
Sbjct: 365 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 424

Query: 579 TRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHK 634
           T   L +   K G +  A  +  E L+K+    T+     LI  L    RV  A L F +
Sbjct: 425 TFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQE 484

Query: 635 LLGK 638
           ++ +
Sbjct: 485 MIDR 488



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 222/475 (46%), Gaps = 8/475 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A E+F+E+   G   +  +Y  ++    + GR+ +  +    M     +    T T+
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I   C       +  A ++ E+MV+KG  P+  T+T LIDG  K    ++A R  L ++
Sbjct: 184 VIDGLCKAQM---LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA-RKLLDVM 239

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +   +P   TY +++ G+CK + +N A+ ++ +M+E+G  P    +TSL+  +   G  
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E AY ++  M   GC P++  Y ++ID L   GRV EA  +     ++    D +TY  +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K    + A  +   M K+G+ PD  AY +L+  + + +++ ++   +   + +G+
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEAC 562
            P   T+  ++ G  +DG    A   F+ M  +    P  ++Y  LI GL K  ++ EA 
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
             ++ MI +GI P   T  +L Y   K G    A  ++E + K      ++  + LI  L
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
                V  A   F +++ +    + V+   L+     + +      + Q  ++G+
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 594



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 17/453 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++     + ++ EA ++ ++M+D G   D    T LI  FC     G  +   +LL
Sbjct: 9   SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA---GQPQVGHKLL 65

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA-FRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            + +++ ++P+V+ +T +I G CK G  +   FR        D     V +YT +I G  
Sbjct: 66  NQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLD-----VISYTTVIKGLA 119

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
             ++++ A  L E +K  G  PN   YT++I G  K G  E      + M    C P   
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y  +IDGLCK   + +A ++ ++  Q+    D ITYT L+    K ++  +A  L   M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  G  P    Y +++  FC+   + E+++   +    G  P    +TS++  YL  G  
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A +    M   GCAPD I Y +LI  L    ++ EA   ++SMI KG +P  +T  T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 584 AYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              + K G+   A  ILE + K          N+L+      +RV  A   + +++    
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 641 NVDRVSLAALKNACYESNK----YALFSDLSQR 669
             + V+   L +  ++  K    ++LF ++ ++
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 452



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 7/365 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F++  ++ E   ++  M   G      T   +V   C+L ++  A+EV  +M  RG
Sbjct: 219 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 278

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
                  +  ++  Y   GR  EA + L+ M  RG   D     +L T+  D  F  G +
Sbjct: 279 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD----VILYTSLIDLLFSTGRV 334

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  + + M+ KG  P+  T+  +I    K G  E A  + L+L+      P+   Y +
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI-LELMAKSGVGPDCFAYNS 393

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKE 396
           ++ GY K E++++A  + +RM   G+ PN  T+  L++G  K G  +RA+ L  +++ KE
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P + +Y  +IDGL K GRV EA+   ++   R +  +  TYT L+    K     +A
Sbjct: 454 EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L   MVK G+NPD+ AY+ LI        +  +   FQE +  G  P + TY  +  G
Sbjct: 514 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573

Query: 517 YLRDG 521
           +   G
Sbjct: 574 FRAAG 578



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 135/261 (51%), Gaps = 4/261 (1%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P + +Y  +ISG    +KM+ A      M + G  P+   +T+LI+G CK G  +  + 
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L++   K    P+++ Y ++I G CK G +   Y    +A   +   D I+YT ++    
Sbjct: 64  LLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGY---FRAVTPKASLDVISYTTVIKGLA 119

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
                 +A  LF  +  AG +P++ AYT +I    +  ++++  K F+E   +   PT+ 
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TYT +I G  +   +  A K F++M Q GC PD ITY  LI G  K SK+DEA +  + M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 569 IGKGISPCEVTRVTLAYEYCK 589
           + KG  P  VT  ++ + +CK
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCK 260



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 144/289 (49%), Gaps = 3/289 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++S +   GR +E + ++ EMT  G          ++ +    G V  A  VFD M
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +G   DA +Y  ++  + ++G V  A   L  M   G   D      L+  +      
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK---L 401

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + QAF + + MV  G KPN  T  VL+ GL K G T++AF LF +++  +   P + +
Sbjct: 402 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G  K  +++ A +  + M ++G++P  +TYTSLIY   K G    A  L++ M 
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           K G  P++ AY+A+I GL     V  A+++ ++  +R    +++TY +L
Sbjct: 522 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 4/228 (1%)

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P   +Y ++I G   +   + AY   + M   GC P++ A+  +I G CK G+ Q  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           ++LL +A +R  + D   YT ++  + K  +       + R V    + D+ +YTT+I  
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
               K++ E+ + F+E  TAG  P    YT++I G L+ G I   +K F+ M+   C P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
             TY  +I GLCK   L +AC+ +E M+ KG  P  +T  TL   + K
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +GC P  ++Y  +ISGL    K+DEA +F+ SMI  G  P  +   TL + +CK G
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAG 56


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 241/524 (45%), Gaps = 41/524 (7%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   +  EM + G P+       ++   C+ G ++ A E+FD+M   G+C +  +Y
Sbjct: 308 GKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTY 367

Query: 227 KLMVVAYCRMGRVTEADRWLSAM--------------LDRG-----------AILDNA-- 259
            +++   C+ G + +A    + M              L RG            + D A  
Sbjct: 368 AVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVA 427

Query: 260 -------TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
                  T   L++  C +G    + +A  + E+MVRKG +P+V ++  +I G C++G  
Sbjct: 428 CGIANVFTYNSLLSWLCKEG---KMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  +F++++     KPN+ TY+ ++ GY K+     A  L +RM+ + + P+  T   
Sbjct: 485 DSANGVFVEMLEK-GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNI 543

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G CK G    + D +  + +EG  P    YN IIDG  K+G V  A  +  +  +  
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  +  TYT L++   K      AL +   M   G+  D+  Y  LI  FCR+  M  + 
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +   E    GL P K  Y+SMI G+ +  N+ +A+   +RM   G   D   Y  LISGL
Sbjct: 664 QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL 723

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            K+ KL  A + Y  M+ KGI P  +T   L +  C +G    A  ILE +D+K    TV
Sbjct: 724 LKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTV 783

Query: 613 ---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              NTLI     E  +  A    +++L K    D  +   L N 
Sbjct: 784 FIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 207/403 (51%), Gaps = 4/403 (0%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +  A  ++++M  +GV     SY  M++ +C+ G +  A+     M
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L++G   +  T ++L+  +  KG     + AF L + M  +   P+ +T  ++I+GLCK 
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKG---DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKA 551

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G T ++     KLV+ + + P   TY  +I G+ KE  +N A  +   M + G+ PN  T
Sbjct: 552 GRTSESQDRLKKLVQ-EGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+LI G CK  N + A  +MD M  +G   ++  Y A+IDG C+KG +  A +LL +  
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  L  +K+ Y+ ++S   K    + AL L  RM+  G+  D+  YTTLI+   ++ K+ 
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + + + E +  G+ P   TY+ +I G    G + +A K  + M++    P    Y  LI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +G  K+  L EA + +  M+ KG+ P + T   L     K G+
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 252/530 (47%), Gaps = 83/530 (15%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           +FE    V   +++S+ +  R+ +    F+ +IE   + +P +T  +N  +    +  ++
Sbjct: 149 DFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIE--KDIVPCLT-VMNIFLSELVKNNMI 205

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
             A +V+++M ++GV  D ++  +M+ A  R G++ EA+ W     ++G  LD    +++
Sbjct: 206 REARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIV 265

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC-KKGWTEKAFRLFLKLV 323
           I A C K    S+  A  LL EM  KGW P+    T +I G+C K+G   +A ++  +++
Sbjct: 266 IEAVCKK--PDSV-AALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEML 321

Query: 324 RSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                KP NV   T ++ GYCK+  ++ A  L ++M E G+ PN  TY  +I   CK GN
Sbjct: 322 SCG--KPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 383 FERAYDLMDLMGKEGCTP----------------------------------NIYAYNAI 408
            ++AY++ + M  +  +P                                  N++ YN++
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSL 439

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +  LCK+G++ EA  + +K  ++ ++   ++Y  ++  H +Q +   A G+F  M++ GL
Sbjct: 440 LSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499

Query: 469 NPDIHAYTTL-----------------------------------IAAFCRQKKMKESEK 493
            P++  Y+ L                                   I   C+  +  ES+ 
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQD 559

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             ++ +  G  PT  TY  +I G++++G+++SA+  +  M +IG +P+  TY  LI+G C
Sbjct: 560 RLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           K + +D A +  + M  KGI         L   +C++GD   A  +L  L
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 201/401 (50%), Gaps = 6/401 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++S   + G++ E  S+  +M   G+ P + S  N ++G  C+ G ++ A  VF EM  +
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILG-HCQQGDMDSANGVFVEMLEK 497

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +Y +++  Y + G    A      M        + T  ++I   C  G R S 
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAG-RTSE 556

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            Q  + L+++V++G+ P   T+  +IDG  K+G    A  ++ ++ +     PNV TYT 
Sbjct: 557 SQ--DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKI-GVSPNVFTYTN 613

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CK   M+ A  +++ MK +G+  +   Y +LI G C+ G+   A  L+  + + G
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +PN   Y+++I G  K   ++ A  L K+     +  D   YT L+S  LK+ +   A 
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+  G+ PD+  Y+ LI   C + +++ ++K  ++     + PT   Y ++I G+
Sbjct: 734 ELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH 793

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            ++GN+  A +    M   G  PD+ TY  L++G  K   L
Sbjct: 794 FKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 4/368 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G +     + +EM   GL     T + ++    + G  EYA  ++D M    
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN 533

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +  +++   C+ GR +E+   L  ++  G I    T   +I  F  +G   S+ 
Sbjct: 534 IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEG---SVN 590

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +  EM + G  PNV+T+T LI+G CK    + A ++  ++ ++   + +V  Y A+
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM-KNKGIELDVTVYCAL 649

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C++  M  A  LL  ++E GL PN   Y+S+I G  K+ N E A  L   M  EG 
Sbjct: 650 IDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  Y  +I GL K+G++  A EL  +   + +  D ITY++L+     + + + A  
Sbjct: 710 PCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK 769

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M +  + P +  Y TLI    ++  ++E+ +   E +  GL P   TY  ++ G +
Sbjct: 770 ILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKV 829

Query: 519 RDGNISSA 526
           +DGN+ S 
Sbjct: 830 KDGNLFSG 837



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 155/342 (45%), Gaps = 5/342 (1%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSD---NYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           L++      W      +  +L+ S    +++ +   +  +++ Y K +++N A      +
Sbjct: 121 LLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSL 180

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            E+ ++P        +    K      A D+ + M  +G   +    + +I    ++G++
Sbjct: 181 IEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKL 240

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +EA    ++A  + ++ D   Y+I++    K+ ++  ALGL   M   G  P    +T +
Sbjct: 241 EEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRV 300

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I    +Q KM E+ K   E ++ G        T+++ GY + G++ SA++ F +MN+ G 
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGI 360

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC--EVTRVTLAYEYCKQGDSATA 596
            P+N+TY  +I   CK   +D+A + Y  M  K ISP    V  +   Y   +  + A+ 
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +           + T N+L+  LC E ++  A   + K++ K
Sbjct: 421 LFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRK 462


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 192/392 (48%), Gaps = 4/392 (1%)

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           ++G VEY   V+ EM  R +  + +++ + +   CR G++ +A+  +  M   G   +  
Sbjct: 180 KIGDVEY---VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVV 236

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T   L+  +C +G  G + +A   ++EM+     PN  T   LIDG CK      A + F
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++ +    KPN+ TY ++I+G C   K+  A  L ++M   GL PN  TY +LI G CK
Sbjct: 297 EEM-QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
               + A  + D + K+   PN+  +N +ID  CK+G ++E + L        +  +  T
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L++   ++ + + A  L   M   GL  D+  Y  LI   C+  K + +EK   E  
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   TY +++ GY  +G + +A+    RM +    P+ +TY  LI G CK +KL+
Sbjct: 476 NLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLE 535

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            A      M+ KG++P   T   +  E  ++G
Sbjct: 536 AANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 126/252 (50%), Gaps = 13/252 (5%)

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           HC    F RA D    +    C P       ++  L K+ ++ +   + K+  +R +  +
Sbjct: 147 HCAYEAFTRAKDYGFKLSLTSCNP-------LLSALVKENKIGDVEYVYKEMIKRRIHTN 199

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK---KMKESEK 493
             T+ I ++   +  +  +A      M   G++P++  Y TL+  +C++    KM ++E 
Sbjct: 200 LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEA 259

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           F +E +   + P + T+ ++I G+ +D N+++A K F+ M + G  P+ +TY +LI+GLC
Sbjct: 260 FMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLC 319

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV- 612
              KL+EA   ++ M+G G+ P  VT   L   +CK+     A  + + + K+  +  V 
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379

Query: 613 --NTLIRKLCSE 622
             NT+I   C E
Sbjct: 380 TFNTMIDAYCKE 391



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 6/225 (2%)

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           A  +   +L+  ++K  E   A   F R    G    + +   L++A  ++ K+ + E  
Sbjct: 128 ATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYV 187

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           ++E I   +     T+   I G  R G ++ A    + M   G +P+ +TY  L+ G CK
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247

Query: 555 QS---KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLW 608
           +    K+ +A  F + M+   I P EVT  TL   +CK  + A A    E + K   K  
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           I T N+LI  LC+  ++  A   + K++G     + V+  AL N 
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 9/205 (4%)

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+ A+ +  ++  + + F  A   G   +  +   ++   +++  I      ++ M +  
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
              +  T+   I+GLC+  KL++A    E M   GISP  VT  TL   YCK+G SA  M
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG-SAGKM 254

Query: 598 IILESLDKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
              E+  K++          T NTLI   C ++ V  A   F ++  +    + V+  +L
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314

Query: 651 KNACYESNKYALFSDLSQRIAEGIG 675
            N    + K     DL  ++  G+G
Sbjct: 315 INGLCNNGKLEEAIDLWDKMV-GLG 338


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 210/450 (46%), Gaps = 23/450 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  GL+  A  V DEM  RG  A      +++ A CR G    A R L  +  +G  LD+
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDS 178

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
               L+++A C++G    + +  ELL ++   G +P++ ++  ++ GLC     +    L
Sbjct: 179 GNCNLVVSAICEQG---CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 319 FLKLVR---------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
            +++VR              P++  Y  +I G CK+     A  +L RM   GL PN   
Sbjct: 236 MVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVC 295

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +++ G C    +E A DL+  M +E C  +   +N ++D  C+ G V    ELL++  
Sbjct: 296 YNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 355

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     D ITYT +++   K+    +A+ L   M   G  P+  +YT ++   CR ++  
Sbjct: 356 EHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWV 415

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++++     I  G  P   T+ ++I    + G    A++  ++M   GC+PD I+Y  +I
Sbjct: 416 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVI 475

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL------ 603
            GL K  K +EA +    MI KGI+P  +   ++A    ++G +   + + +S+      
Sbjct: 476 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 535

Query: 604 -DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
            D  L+    N +I  LC       A  FF
Sbjct: 536 SDAALY----NAVISSLCKRWETDRAIDFF 561



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 206/456 (45%), Gaps = 36/456 (7%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC-------- 234
           G  L +   N VV   CE G V+   E+  ++ + G   D  SY  ++   C        
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232

Query: 235 -----RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
                 M RV EA   LS M + G   D      +I   C  G     + A ++L  M  
Sbjct: 233 EELMVEMVRVHEA---LSQMPEHGCTPDLRMYATIIDGICKDGHH---EVANDILSRMPS 286

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G KPNV  +  ++ GLC     E+A  L  ++ + D    +V T+  ++  +C+   ++
Sbjct: 287 YGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV-TFNILVDFFCQNGLVD 345

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           R   LLE+M E G +P+  TYT++I G CK G  + A  L+  M   GC PN  +Y  ++
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLC+  R  +A EL+    Q+    + +T+  L++   K+   +QA+ L  +M+  G +
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+ +Y+T+I    +  K +E+ +     I  G+ P    Y+SM     R+G     ++ 
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F  +       D   Y A+IS LCK+ + D A  F+  M+  G  P E            
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE------------ 573

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
               +T  I++  L  +  +R    L+ +LCS + V
Sbjct: 574 ----STYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 54/349 (15%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVI 177
           +R+Y      +  +G+ E A++++  M S                     R +E   ++ 
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM     PL   T N +V   C+ GLV+   E+ ++M   G   D  +Y  ++  +C+ G
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 377

Query: 238 RVTE-----------------------------ADRWLSA------MLDRGAILDNATLT 262
            V E                             A+RW+ A      M+ +G + +  T  
Sbjct: 378 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 437

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C KG     +QA ELL++M+  G  P++ +++ +IDGL K G TE+A  L L +
Sbjct: 438 TLINFMCKKGLA---EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL-LNV 493

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PN   Y++M S   +E + ++   + + +++  +  +   Y ++I   CK   
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            +RA D    M   GC PN   Y  +I GL  +G V+EA +LL +   R
Sbjct: 554 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 167/437 (38%), Gaps = 93/437 (21%)

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           +A LD G    +  L+ LI + C  G      +A +        G    V  +  +I G 
Sbjct: 36  TAPLDAGG---SGRLSALIRSLCAAGRTADAARALD------TAGDAAGVVAYNAMIAGY 86

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C+ G    A RL   +       PN +TY  ++   C    +  A  +L+ M  +G    
Sbjct: 87  CRAGQVAAARRLAAAV----PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAAT 142

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
                 ++   C+ G F  A   + ++  +GCT +    N ++  +C++G V E  ELL+
Sbjct: 143 PPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLR 202

Query: 427 KAFQRELQADKITYTILL-----------------------------SEH---------- 447
           K      + D ++Y  +L                              EH          
Sbjct: 203 KLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYA 262

Query: 448 ------LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE----KFFQE 497
                  K    + A  +  RM   GL P++  Y T++   C  ++ +E+E    + FQE
Sbjct: 263 TIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE 322

Query: 498 -------------------------------AITAGLFPTKETYTSMICGYLRDGNISSA 526
                                           +  G  P   TYT++I G+ ++G +  A
Sbjct: 323 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEA 382

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           V   + M+  GC P+ I+Y  ++ GLC+  +  +A +    MI +G  P  VT  TL   
Sbjct: 383 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 442

Query: 587 YCKQGDSATAMIILESL 603
            CK+G +  A+ +L+ +
Sbjct: 443 MCKKGLAEQAIELLKQM 459


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 211/403 (52%), Gaps = 5/403 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G     F+++ +M    L       N ++   C+   ++ A  +F EM  +G
Sbjct: 22  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 81

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A R LS M++R    D  T + LI AF  +G    + 
Sbjct: 82  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLV 138

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EMV++   P++ T++ LI+G C     ++A ++F  +V    + P+V TY  +
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTL 197

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     +   M ++GL+ NT TY  LI G  + G+ + A ++   M  +G 
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  YN ++DGLCK G++++A  + +   + +++    TY I++    K  + +    
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+ AY T+I+ FCR+   +E++  F+E    G  P    Y ++I   L
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+  ++ +  + M   G A D  T G L++ +    +LD++
Sbjct: 378 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 419



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 191/397 (48%), Gaps = 13/397 (3%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLI 265
           + D M A+G   D  +Y ++V   C+ G    A   L+ M    L+ G ++ N     +I
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT----II 58

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C       +  A  L +EM  KG +PNV T++ LI  LC  G    A RL   ++  
Sbjct: 59  DGLCK---YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               P+V T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + 
Sbjct: 116 -KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  + + M  + C P++  YN +I G CK  RV+E  E+ ++  QR L  + +TY IL+ 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              +  +   A  +F  MV  G+ P+I  Y TL+   C+  K++++   F+    + + P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           T  TY  MI G  + G +      F  ++  G  PD + Y  +ISG C++   +EA   +
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
           + M   G  P      TL     + GD  A+A +I E
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 184/373 (49%), Gaps = 39/373 (10%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L++ MV KG +P++ T+ V+++GLCK+G T+ AF L  K+ +    +P V  Y  +I G 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDGL 61

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + M+ A  L + M+ +G+ PN  TY+SLI   C  G +  A  L+  M +    P++
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           + ++A+ID   K+G++ EA +L  +  +R +    +TY+ L++         +A  +F  
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKE-------------------------------- 490
           MV     PD+  Y TLI  FC+ K+++E                                
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 491 ---SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
              +++ F+E ++ G+ P   TY +++ G  ++G +  A+  F+ + +    P   TY  
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +I G+CK  K+++    + ++  KG+ P  V   T+   +C++G    A  + + + +  
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 608 WIRT---VNTLIR 617
            +      NTLIR
Sbjct: 362 TLPNSGCYNTLIR 374



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 157/300 (52%), Gaps = 3/300 (1%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P++ TY  +++G CK    + A  LL +M++  L P    Y ++I G CK  + + A +
Sbjct: 13  QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L   M  +G  PN+  Y+++I  LC  GR  +A  LL    +R++  D  T++ L+   +
Sbjct: 73  LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+ +  +A  L+  MVK  ++P I  Y++LI  FC   ++ E+++ F+  ++   FP   
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY ++I G+ +   +   ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
           +  G+ P  +T  TL    CK G    AM++ E L +   +  I T N +I  +C   +V
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 144/285 (50%), Gaps = 3/285 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L++RM  +G  P+  TY  ++ G CK G+ + A++L++ M +    P +  YN IIDGLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K   + +A  L K+   + ++ + +TY+ L+S          A  L   M++  +NPD+ 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            ++ LI AF ++ K+ E+EK + E +   + P+  TY+S+I G+     +  A + F+ M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
               C PD +TY  LI G CK  +++E  + +  M  +G+    VT   L     + GD 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             A  I + +        I T NTL+  LC   ++  A + F  L
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 84/217 (38%), Gaps = 38/217 (17%)

Query: 457 LGLFCRMVKAGLNPD-----------------------------------IHAYTTLIAA 481
           + L  RMV  G  PD                                   +  Y T+I  
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+ K M ++   F+E  T G+ P   TY+S+I      G  S A +    M +    PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             T+ ALI    K+ KL EA + Y+ M+ + I P  VT  +L   +C       A  + E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 602 SLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +  K     + T NTLI+  C  KRV      F ++
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 236/533 (44%), Gaps = 45/533 (8%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLK---EGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           + N N +  HE +  ++ ++AE G L    E +  V+E+ ++   +I    N ++ +  +
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIAC--NALLSLVVK 182

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
              +E A +V+DEMC RG C D  S  +MV   C  G+V E  + +     +G + +   
Sbjct: 183 SRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVF 242

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF- 319
              +I  +C     G I+ A  + +E+  KG+ P + T   +I+G CKKG    + RL  
Sbjct: 243 YNTIIGGYCK---LGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLE 299

Query: 320 ---------------------------------LKLVRSDNYKPNVHTYTAMISGYCKEE 346
                                            ++ + +++ KP++ TY  +I+  CKE 
Sbjct: 300 EVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEG 359

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K   A  LL+   ++GL+    +Y  LI  +CK   ++ A  L+  + + GC P+I  Y 
Sbjct: 360 KKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYG 419

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GL   G + +A  +  K   R +  D   Y +L+S   K      A  LF  M+  
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PD + Y TLI  F R     E+ K F  ++  G+      + +MI G+ R G +  A
Sbjct: 480 SILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +    RMN+    PD  TY  +I G  KQ  +  A + +  M      P  VT  +L   
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLING 599

Query: 587 YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
           +C QGD + A    + +  +  +  V    TLIR    E      A+++ +L+
Sbjct: 600 FCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELM 652



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 213/490 (43%), Gaps = 54/490 (11%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M++ F + G       ++ E+   GL +    LN ++      G      E    
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + A     D ++Y +++   C+ G+   A   L     +G IL N +   LI A+C    
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSK- 394

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                 A +LL ++  +G KP++ T+ +LI GL   G  + A  + +KL+      P+  
Sbjct: 395 --EYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI-DRGVSPDAA 451

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK  +   A++L   M ++ +LP+   Y +LI G  + G+F+ A  +  L 
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLS 511

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G   ++  +NA+I G C+ G + EA   + +  +  L  DK TY+ ++  ++KQ + 
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A+ +F  M K    P++  YT+LI  FC Q     +E+ F+E  +  L P   TYT++
Sbjct: 572 ATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTL 631

Query: 514 ICGYLRDGN-ISSAVKYFQRMNQIGCAPDNITYGALISG--------------------- 551
           I  + ++ + +  AV Y++ M    C P+ +T+  L+ G                     
Sbjct: 632 IRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQS 691

Query: 552 ----------------------------LCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                                       LC    +  AC   + M+ KG SP  V+   +
Sbjct: 692 FLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAI 751

Query: 584 AYEYCKQGDS 593
            + +C  G+S
Sbjct: 752 LHGFCVVGNS 761



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 150/370 (40%), Gaps = 42/370 (11%)

Query: 279 QAFELLEEMVRKGWKPNV-YTHTVL---IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           + F  +E+++      NV  TH  L   +    + G+  KA  ++  +V   +  P+V  
Sbjct: 113 RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIA 172

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
             A++S   K  ++  A  + + M E+G   +  +   ++ G C  G  E    L++   
Sbjct: 173 CNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRW 232

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEA----YELLKKAFQRELQ------------ADKI 438
            +GC PNI  YN II G CK G ++ A     EL  K F   L+             D +
Sbjct: 233 GKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFV 292

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKA--------------------GLNPDIHAYTTL 478
               LL E +K+   +  +     ++ A                       PDI  Y  L
Sbjct: 293 ASDRLL-EEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNIL 351

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C++ K + +     EA   GL  T  +Y  +I  Y +      A K   ++ + GC
Sbjct: 352 INRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGC 411

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD +TYG LI GL     +D+A      +I +G+SP       L    CK G    A +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471

Query: 599 IL-ESLDKKL 607
           +  E LD+ +
Sbjct: 472 LFSEMLDRSI 481



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 146/381 (38%), Gaps = 83/381 (21%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + +  +M +++ + G+    +  N ++   C+ G    A+ +F EM  R +  DA  Y
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVY 488

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------- 272
             ++  + R G   EA +  +  +++G  +D      +I  FC  G              
Sbjct: 489 ATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548

Query: 273 -------------FRGSIKQ-----AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                          G +KQ     A ++  +M +   KPNV T+T LI+G C +G    
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSL 608

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKE----------------------------- 345
           A   F K ++S +  PNV TYT +I  + KE                             
Sbjct: 609 AEETF-KEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667

Query: 346 ----------------EKMNRAEMLL-----ERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                           +  N  +  L      RMK  G   +   Y S++   C  G  +
Sbjct: 668 LQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVK 727

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A  L D M K+G +P+  ++ AI+ G C  G  ++   +  +    +     + Y+ +L
Sbjct: 728 TACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVL 787

Query: 445 SEHLKQAETKQALGLFCRMVK 465
            +HL +A   +A  +   MV+
Sbjct: 788 EQHLPKAVICEASTILHAMVE 808


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 214/439 (48%), Gaps = 12/439 (2%)

Query: 207 AEEVFDEMCARGV---CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           A  +F+ M   GV    A+     +++  +C +GR+  A    +  L  G  + N TL  
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 264 LITAFCD-KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           LI   CD K    ++   F  + E+   G+ P+V+++  LI GLC +  +++A  L L +
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPEL---GYTPDVFSYNALIKGLCVEKKSQEALELLLHM 191

Query: 323 VRSDNYK--PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
                Y   PNV +Y+ +I G+ KE ++++A  L + M  QG  P+  TY+SLI G CK 
Sbjct: 192 TADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKA 251

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
               +A  ++  M  +G  PN   YN +I G C  G+++EA  LLKK     LQ D +TY
Sbjct: 252 QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 311

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            +L+  + K     +A  +F  MV+ G  P+   Y  L+  +  +  + +        I 
Sbjct: 312 ILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+      +  +IC Y + G +  A+  F  M Q G  PD ++Y  +I  LCK  ++++
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIR 617
           A   +  M+ +G+SP  ++  +L +  C  G+      +  E +++ +    +  NT++ 
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491

Query: 618 KLCSEKRVGMAALFFHKLL 636
            LC E RV  A  FF  ++
Sbjct: 492 NLCKEGRVVEAQDFFDMVI 510



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 243/511 (47%), Gaps = 16/511 (3%)

Query: 170 KEGFSMVIEMTNNG----LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           +E   +++ MT +G     P + S    + G   E G V+ A  +FDEM  +G   D  +
Sbjct: 182 QEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKE-GEVDKAYFLFDEMIGQGFPPDVVT 240

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++   C+   + +A+  L  M D+G + +  T  ++I  +C     G +++A  LL+
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCS---LGQLEEAVRLLK 297

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M   G +P+V T+ +LI   CK G   +A  +F  +VR    KPN   Y  ++ GY  +
Sbjct: 298 KMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATK 356

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +     LL+ M   G+      +  LI  + K G  ++A      M + G  P++ +Y
Sbjct: 357 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 416

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           + +I  LCK GRV++A     +     L  + I++T L+       E K+   L   M+ 
Sbjct: 417 STVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 476

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G++PD     T++   C++ ++ E++ FF   I  G+ P   +Y ++I GY   G +  
Sbjct: 477 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDE 536

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           ++K F RM  IG  PD+ TY AL++G  K  ++++A   Y  M  K +  C +T   + +
Sbjct: 537 SIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILH 596

Query: 586 EYCKQGDSATAM-IILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
              + G    A  + ++ +D+  +L I T NT++  LC    V  A   F  L  K+  +
Sbjct: 597 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 656

Query: 643 DRVSLAALKNACYESNKY----ALFSDLSQR 669
           D  +   + NA  +  +     +LFS +  R
Sbjct: 657 DVWTFNIVINALLKVGRIDEAKSLFSAMVLR 687



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 226/493 (45%), Gaps = 13/493 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE-VFDE 213
           ++  ++  F  +GRL   F+        G  +   TLN+++   C+    + A + VF  
Sbjct: 96  IIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRR 155

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D  SY  ++   C   +  EA   L  M   G    N +  ++  +    GF
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGY--NCSPNVVSYSTIIDGF 213

Query: 274 --RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G + +A+ L +EM+ +G+ P+V T++ LIDGLCK     KA    L+ +      PN
Sbjct: 214 FKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKA-EAILQHMFDKGVMPN 272

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             TY  MI GYC   ++  A  LL++M   GL P+  TY  LI  +CK+G    A  + D
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M ++G  PN   Y+ ++ G   KG + +  +LL    +  +  +   + IL+  + K  
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+  F  M + GL PD+ +Y+T+I   C+  +++++   F + ++ GL P   ++T
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S+I G    G      +    M   G  PD I    ++  LCK+ ++ EA  F++ +I  
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVG 626
           G+ P  V+  TL   YC  G    ++     ++   L    W  T N L+       RV 
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW--TYNALLNGYFKNGRVE 570

Query: 627 MAALFFHKLLGKD 639
            A   + ++  KD
Sbjct: 571 DALALYREMFRKD 583



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 247/574 (43%), Gaps = 76/574 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + + + +  EM   G P    T + ++   C+   +  AE +   M  +G
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y +M+  YC +G++ EA R L  M   G   D  T  LLI  +C  G      
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG---RCA 325

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG------------------WTEKAFRLFL 320
           +A  + + MVRKG KPN   + +L+ G   KG                  +  +AF + +
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385

Query: 321 ----------------KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                             +R +  +P+V +Y+ +I   CK  ++  A     +M  +GL 
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  ++TSLI+G C +G +++  +L   M   G  P+    N I+D LCK+GRV EA + 
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                   ++ + ++Y  L+  +    +  +++  F RMV  GL PD   Y  L+  + +
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 485 QKKMKESEKFFQE---------AITA-----GLFPTK---------------------ET 509
             +++++   ++E         AIT+     GLF                        ET
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIET 625

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y +++ G   +  +  A++ F+ +       D  T+  +I+ L K  ++DEA   + +M+
Sbjct: 626 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685

Query: 570 GKGISPCEVTRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
            +G  P  +T   +     ++G   +S    + +E          +N +IR+L  +  V 
Sbjct: 686 LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR 745

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            A  +  K+  K+ +V+  S AAL        KY
Sbjct: 746 RAGTYLTKIDEKNFSVE-ASTAALLIPIVSEKKY 778



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 4/420 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++  +A  G L +   ++  M  +G+P      N ++    + G V+ A   F EM
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  SY  ++   C++GRV +A    + M+  G   +  + T LI   C  G  
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG-- 462

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              K+  EL  EM+ +G  P+      ++D LCK+G   +A + F  +V     KPNV +
Sbjct: 463 -EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA-QDFFDMVIHIGVKPNVVS 520

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GYC   KM+ +    +RM   GL P++ TY +L+ G+ K G  E A  L   M 
Sbjct: 521 YNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF 580

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++         N I+ GL + GR+  A EL  K   R  Q    TY  +L    + +   
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 640

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL +F  +       D+  +  +I A  +  ++ E++  F   +  G  P   TY+ MI
Sbjct: 641 EALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI 700

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              + +G +  +   F  M + GCA D+     +I  L ++  +  A  +   +  K  S
Sbjct: 701 KSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFS 760



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 5/412 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++ ++A+ G + +  +   EM  NGL     + + V+ I C++G VE A   F+
Sbjct: 378 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFN 437

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  +  S+  ++   C +G   + +     M++RG   D   +  ++   C +G
Sbjct: 438 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 497

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A +  + ++  G KPNV ++  LIDG C  G  +++ + F ++V S   +P+ 
Sbjct: 498 ---RVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV-SIGLRPDS 553

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY A+++GY K  ++  A  L   M  + +     T   +++G  + G    A +L   
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMK 613

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G    I  YN ++ GLC+   V EA  + +    +E + D  T+ I+++  LK   
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  LF  MV  G  P +  Y+ +I +   +  ++ES+  F      G          
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNV 733

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           +I   L  G++  A  Y  ++++   + +  T  AL+  +  + K  +  +F
Sbjct: 734 IIRRLLEKGDVRRAGTYLTKIDEKNFSVEAST-AALLIPIVSEKKYQKEVKF 784


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 208/407 (51%), Gaps = 18/407 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N +V   C  G ++ A  + D +       D  +Y  ++ A C  G V +A      M
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186

Query: 250 LDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           L RG      T ++L+ A C + G+    KQA  LL+EM  KG +P++ T+ VLI+ +C 
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGY----KQAVVLLDEMRSKGCEPDIVTYNVLINAMCS 242

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G   +A ++ L  + S   KP+  TYT ++   C  E+   A+ LL +M      P+  
Sbjct: 243 QGDVGEALKV-LNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+ ++I   C+ G   RA  ++  M + GCTP+I  Y++I+DGLCK+ RV EA +LLK+ 
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 429 F----QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF-C 483
                 +    D++T+  +++   ++    +A+ +   M + G  PDI  Y  ++  F C
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  K +E+       ++ GL P   TY S+  G  R+  +  A+  F+R+  +G +PD +
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL----AYE 586
            Y A++ GLCK+ + D A  F+  M+  G  P E T + L    AYE
Sbjct: 482 LYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYE 528



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 195/410 (47%), Gaps = 16/410 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLI--TSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           MV+ +   G +     M+     + +P    T T N ++   C  G V  A  VFD+M  
Sbjct: 134 MVNGYCRAGNIDAARRMI-----DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y +++ A C+     +A   L  M  +G   D  T  +LI A C +   G 
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ---GD 245

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A ++L  +   G KP+  T+T ++  LC     E+A +L  K+  S++  P+  T+ 
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF-SNDCAPDEVTFN 304

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY----DLMDL 392
           A+I+  C++  + RA  +L +M E G  P+  TY+S++ G CK    + A     +L+  
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL-KQA 451
           M  + C P+   +N II  LC+KG    A +++ +  +     D  TY  ++   L K  
Sbjct: 365 MVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSC 424

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +T++AL L   MV  GL PD   Y +L     R+ +M+ +   F+     GL P K  Y 
Sbjct: 425 KTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYN 484

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           +++ G  +      A+ +F  M   GC PD  TY  L+ G+  +  L+EA
Sbjct: 485 AILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 11/345 (3%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           RG +  A  L+  +   G  P V    +LI  LC  G    A R+   L  S      + 
Sbjct: 74  RGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPS----ATII 129

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY  M++GYC+   ++ A  +++ +      P+T TY  LI   C  G    A  + D M
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              GC+P++  Y+ ++D  CK+   ++A  LL +   +  + D +TY +L++    Q + 
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDV 246

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +AL +   +   G  PD   YT ++ + C  ++ +E++K   +  +    P + T+ ++
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAV 306

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE----SMI 569
           I    + G +  A K   +M++ GC PD ITY +++ GLCK+ ++DEA +  +     M+
Sbjct: 307 ITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMV 366

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
            K   P +VT  T+    C++G    A+ +++ + +   I  + T
Sbjct: 367 SKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 7/330 (2%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           K+   ++ EM + G      T N ++   C  G V  A +V + + + G   DA +Y  +
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPV 271

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           + + C   R  EAD+ L+ M       D  T   +IT+ C KGF G   +A ++L +M  
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVG---RATKVLAQMSE 328

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR---SDNYKPNVHTYTAMISGYCKEE 346
            G  P++ T++ ++DGLCK+   ++A +L  +L+    S N  P+  T+  +I+  C++ 
Sbjct: 329 HGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKG 388

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGH-CKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +RA  +++ M E G +P+  TY  ++ G  CK    E A DL++LM   G  P+   Y
Sbjct: 389 LFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTY 448

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
            ++  GL ++  ++ A  + ++     L  DK+ Y  +L    K+  T  A+  F  MV 
Sbjct: 449 KSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVS 508

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
            G  PD   Y  L+     +  ++E+++  
Sbjct: 509 NGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 9/272 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S     R +E   ++ +M +N       T N V+   C+ G V  A +V  +M   G
Sbjct: 271 VLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG 330

Query: 219 VCADASSYKLMVVAYCRMGRVTEA----DRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              D  +Y  ++   C+  RV EA       L+ M+ +  I D  T   +IT+ C KG  
Sbjct: 331 CTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL- 389

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDG-LCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
               +A ++++EM   G  P++ T+  ++DG LCK   TE+A  L L L+ S+   P+  
Sbjct: 390 --FDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDL-LNLMVSNGLCPDTT 446

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY ++  G  +E++M RA  +  R++  GL P+   Y +++ G CK    + A D    M
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
              GC P+   Y  +++G+  +G ++EA ELL
Sbjct: 507 VSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 45/337 (13%)

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GL ++G  + A RL +  +      P V     +I   C + ++  AE ++E +     +
Sbjct: 70  GLVQRGELDGALRL-VHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATI 128

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
               TY +++ G+C+ GN + A  ++D +      P+ + YN +I  LC +G V +A  +
Sbjct: 129 ---ITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGCVLDALAV 182

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                 R      +TY+ILL    K++  KQA+ L   M   G  PDI  Y  LI A C 
Sbjct: 183 FDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCS 242

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           Q                                   G++  A+K    +   GC PD +T
Sbjct: 243 Q-----------------------------------GDVGEALKVLNSLPSYGCKPDAVT 267

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  ++  LC   + +EA +    M     +P EVT   +    C++G    A  +L  + 
Sbjct: 268 YTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMS 327

Query: 605 KKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +      I T ++++  LC E+RV  A     +LL +
Sbjct: 328 EHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 4/143 (2%)

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G ++ G +  A++    ++  G  P  I    LI  LC   ++ +A +  E++   G S 
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSA 126

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +T  T+   YC+ G+   A  +++S+       T N LIR LC    V  A   F  +
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186

Query: 636 LGKDQNVDRVSLAALKNA-CYES 657
           L +  +   V+ + L +A C ES
Sbjct: 187 LHRGCSPSVVTYSILLDATCKES 209


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 239/492 (48%), Gaps = 24/492 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G+ +    +++EM+  GL +     N ++    + G    A +    M   G
Sbjct: 248 IINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG 307

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D ++Y +++   C  G V +A++ L   + RG + +  + T LI  +C    +G   
Sbjct: 308 CDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCK---QGEYL 364

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL +M  +G KP++ T+  LI GL   G  + A  +  K+V      P+ + Y  +
Sbjct: 365 RALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEK-GVLPDANIYNVL 423

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG CK+ ++  A++LL  M +Q + P+     +L+ G  + G+FE A  L +L  ++G 
Sbjct: 424 MSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGI 483

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YNA+I G CK G +++A    K+  Q     D+ TY+ ++  ++K  +   AL 
Sbjct: 484 DPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALR 543

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  MVK    P++  YT LI  FC    +  +EK F++ ++  L P   TYT +I  + 
Sbjct: 544 MFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFC 603

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +  N++ A  +F++M    C P+++TY  L++GL        + Q  E            
Sbjct: 604 KGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQ----------- 652

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           T  +L  E       +  M+I +  D++    + N+++  LC  K V  A     K++ K
Sbjct: 653 TENSLVLE-------SFGMMISDGWDRR--AASYNSILICLCQHKMVKHALHLRDKMMSK 703

Query: 639 DQNVDRVSLAAL 650
               D VSL AL
Sbjct: 704 GFLPDPVSLVAL 715



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 241/523 (46%), Gaps = 45/523 (8%)

Query: 154 EVMQCMVSSFAEIG---RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           E    ++S FA+ G   R  E +   I++ ++ +P + S  N ++ +  + G VE A +V
Sbjct: 102 EAFSLVISVFADCGLVDRALEFYRTFIKI-HHCVPDVFSC-NSLLNVLVKHGKVEIACKV 159

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           +DEM  R    D  +  +MV   C+ G+V +  + +     RG + +      LI  +C 
Sbjct: 160 YDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCK 219

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-------- 322
           KG     ++A  L +E+  KG+ P V T+  +I+G CKKG  E   +L +++        
Sbjct: 220 KG---DTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVS 276

Query: 323 ------VRSDNYK--------------------PNVHTYTAMISGYCKEEKMNRAEMLLE 356
                 +    +K                    P++ TY  +I+G C   ++++AE LLE
Sbjct: 277 IHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLE 336

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           +  ++GLLPN  +YT LI+ +CK G + RA DL+  M + G  P++  Y A+I GL   G
Sbjct: 337 QAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAG 396

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            V  A  +  K  ++ +  D   Y +L+S   K+     A  L   M+   + PD     
Sbjct: 397 EVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITA 456

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           TL+  F R    +E++K F+  I  G+ P    Y +MI GY + G +  A+  F+RM Q 
Sbjct: 457 TLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQG 516

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             +PD  TY  +I G  K + L  A + +  M+     P  VT   L   +C  GD   A
Sbjct: 517 LHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRA 576

Query: 597 MIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
               +   SL  K  + T   LI   C    +  A  FF ++L
Sbjct: 577 EKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQML 619



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 6/370 (1%)

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYT 298
           +E +  L  M  +  +      +L+I+ F D G    + +A E     ++     P+V++
Sbjct: 83  SEVESLLKIMKSKDLMPTREAFSLVISVFADCGL---VDRALEFYRTFIKIHHCVPDVFS 139

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
              L++ L K G  E A +++ ++V  +    N +T   M+ G CKE K+     L+E+ 
Sbjct: 140 CNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDN-YTVCIMVKGLCKEGKVEDGWKLIEKR 198

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G +PN   Y +LI G+CK G+ ERA  L   +  +G  P +  Y AII+G CKKG+ 
Sbjct: 199 WGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKF 258

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +   +LL +  +R L      Y  ++    K     +A      M+K+G +PD+  Y  L
Sbjct: 259 EVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNIL 318

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C   ++ ++E+  ++AI  GL P K +YT +I  Y + G    A+    +M++ G 
Sbjct: 319 ITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH 378

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD +TY ALI GL    ++D A      M+ KG+ P       L    CK+G    A +
Sbjct: 379 KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKV 438

Query: 599 IL-ESLDKKL 607
           +L E LD+ +
Sbjct: 439 LLAEMLDQNV 448



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 44/367 (11%)

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK-EGCTPNIYAYNA 407
           +  E LL+ MK + L+P    ++ +I      G  +RA +      K   C P++++ N+
Sbjct: 83  SEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNS 142

Query: 408 IID-----------------------------------GLCKKGRVQEAYELLKKAFQRE 432
           +++                                   GLCK+G+V++ ++L++K + R 
Sbjct: 143 LLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRG 202

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
              + + Y  L+  + K+ +T++A  LF  +   G  P +  Y  +I  FC++ K +  +
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVD 262

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           K   E    GL  +   Y ++I    + G    A      M + GC PD  TY  LI+G 
Sbjct: 263 KLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGS 322

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWI 609
           C   ++ +A Q  E  I +G+ P +V+   L + YCKQG+   A+ +L  + +   K  +
Sbjct: 323 CSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDL 382

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAAL-KNACYESNKYALFS 664
            T   LI  L     V +A    +K++ K    D N+  V ++ L K     + K  L  
Sbjct: 383 VTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAE 442

Query: 665 DLSQRIA 671
            L Q +A
Sbjct: 443 MLDQNVA 449



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 128/331 (38%), Gaps = 58/331 (17%)

Query: 159 MVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +V  F   G  +E    F + IE    G+       N ++   C+ G+++ A   F  M 
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIE---KGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI 514

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFR 274
                 D  +Y  ++  Y +M  +  A R    M+ +GA   N  T TLLI  FC     
Sbjct: 515 QGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMV-KGACKPNVVTYTLLINGFC---LS 570

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR---------- 324
           G I +A +  ++M+    KPNV T+T+LI   CK     KA   F +++           
Sbjct: 571 GDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTY 630

Query: 325 ------------------------------------SDNYKPNVHTYTAMISGYCKEEKM 348
                                               SD +     +Y +++   C+ + +
Sbjct: 631 NYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMV 690

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L ++M  +G LP+  +  +L++G C  G  +   +++     E        Y+  
Sbjct: 691 KHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEK 750

Query: 409 IDGLCKKGRVQEAYELLKK-AFQRELQADKI 438
           +D    +G+  EA  +L   A Q  LQ +++
Sbjct: 751 LDAFLSQGQTSEASLILHSLADQFSLQMEEV 781


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 219/454 (48%), Gaps = 46/454 (10%)

Query: 167 GRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G L+EG   +  MTN G +P + +    ++   C++G  + A  +   +   G   DA+S
Sbjct: 83  GELEEGSRFLEYMTNKGKIPDVVAC-TALIREFCKIGRTKNATRIMGILEESGAVIDANS 141

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELL 284
           Y +++ AYC+ G + EA R    +LD  ++  NA T   ++ + CD   RG +KQA ++L
Sbjct: 142 YNVLINAYCKSGEIEEALR----VLDHTSVAPNAATYDAVLCSLCD---RGKLKQAMQVL 194

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +  ++    P+V T TVLID  CK+    +A +LF ++ R    KP+V TY  +I G+CK
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM-RGKGCKPDVVTYNVLIKGFCK 253

Query: 345 EEKMNRAEMLLER-----------------------------------MKEQGLLPNTNT 369
           E +++ A + L++                                   M  +G  P+  T
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +  LI   C+ G   +A +++++M K G TPN  ++N +I G C +  +  A E L+   
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R    D +TY ILL+   K  +   A+ +  ++   G +P + +Y T+I    +  K +
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +  +E    GL P   T TS++ G  R+G +  A+K+F  +   G  P+   Y +++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            GLCK  +   A  F   M+  G  P E +  TL
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTL 527



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 220/481 (45%), Gaps = 57/481 (11%)

Query: 143 LISNGNFERAH-------------EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           LI NG  E                +V+ C  ++  F +IGR K    ++  +  +G  + 
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            ++ N ++   C+ G +E A  V D      V  +A++Y  ++ + C  G++ +A + L 
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             L      D  T T+LI A C +     + QA +L  EM  KG KP+V T+ VLI G C
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKES---GVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC 252

Query: 308 KKGWTEKAFRLFLK----------------LVRS--------DNYK-----------PNV 332
           K+G  ++A  +FLK                ++RS        D  K           P+V
Sbjct: 253 KEGRLDEAI-IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSV 311

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +I+  C++  + +A  +LE M + G  PN+ ++  LI G C     +RA + +++
Sbjct: 312 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEI 371

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   GC P+I  YN ++  LCK G+V +A  +L +   +      I+Y  ++   LK  +
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + A+ L   M   GL PD+   T+++    R+ K+ E+ KFF      G+ P    Y S
Sbjct: 432 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNS 491

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G  +    S A+ +   M   GC P   +Y  LI G+  +   +EA +    +  +G
Sbjct: 492 IMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551

Query: 573 I 573
           +
Sbjct: 552 L 552



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 189/406 (46%), Gaps = 10/406 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + E  R+L  M ++G I D    T LI  FC  G   +  +   +LEE    G   
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE---SGAVI 137

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +  ++ VLI+  CK G  E+A R+        +  PN  TY A++   C   K+ +A  +
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVL----DHTSVAPNAATYDAVLCSLCDRGKLKQAMQV 193

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+R  +    P+  T T LI   CK     +A  L + M  +GC P++  YN +I G CK
Sbjct: 194 LDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +GR+ EA   LKK      Q+D I++ ++L           A+ L   M++ G  P +  
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  LI   C++  + ++    +     G  P   ++  +I G+     I  A+++ + M 
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             GC PD +TY  L++ LCK  K+D+A      +  KG SP  ++  T+     K G + 
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 595 TAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            A+ +LE +     K  + T  +++  L  E +V  A  FFH L G
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKG 479



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 97/275 (35%), Gaps = 66/275 (24%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++  M   G      T N ++   C+ GL+  A  V + M   G
Sbjct: 282 ILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 341

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR---- 274
              ++ S+  ++  +C    +  A   L  M+ RG   D  T  +L+TA C  G      
Sbjct: 342 HTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAV 401

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G  + A ELLEEM  KG KP++ T T ++ GL
Sbjct: 402 VILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL 461

Query: 307 CKKGWTEKAFRLFLKL----------------------------------VRSDNYKPNV 332
            ++G   +A + F  L                                  + ++  KP  
Sbjct: 462 SREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTE 521

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            +YT +I G   E     A  L   +  +GL+  +
Sbjct: 522 ASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKS 556



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 38/207 (18%)

Query: 488 MKESEKFFQEAITA--GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           ++ SE+F + A+         +E+    +C  +R+G +    ++ + M   G  PD +  
Sbjct: 48  LQHSERFSKGALNGVNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVAC 107

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES--- 602
            ALI   CK  +   A +    +   G      +   L   YCK G+   A+ +L+    
Sbjct: 108 TALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSV 167

Query: 603 --------------------------LDKKLW------IRTVNTLIRKLCSEKRVGMAAL 630
                                     LD++L       + T   LI   C E  VG A  
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 227

Query: 631 FFHKLLGKDQNVDRVSLAAL-KNACYE 656
            F+++ GK    D V+   L K  C E
Sbjct: 228 LFNEMRGKGCKPDVVTYNVLIKGFCKE 254


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 253/544 (46%), Gaps = 38/544 (6%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           RHF +   V A  +I +G    A    +  V +   +  L +GF ++  M  +G+     
Sbjct: 136 RHFEKTLAVFA-DVIDSGTRPDAVAYGKA-VQAAVMLKDLDKGFELMKSMVKDGMGPSVF 193

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
             N V+G  C++  ++ A ++FDEM  R +  +  +Y  ++  YC++G + EA  +   M
Sbjct: 194 AYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERM 253

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY------------ 297
            ++    +  T   L+   C     G +  A E+L EM   G+ P  +            
Sbjct: 254 KEQNVECNLVTYNSLLNGLCGS---GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGA 310

Query: 298 ----------------THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
                           T+ +L++GLC+ G  EKA  +  KLV  +   P+  +Y  +++ 
Sbjct: 311 GDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLV-ENGVTPSKISYNILVNA 369

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           YC+E  + +A +  E+M+E+GL PN  T+ ++I   C+ G  + A   +  M ++G +P 
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPT 429

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  YN++I+G  +KG     +E L +  +  ++ + I+Y  L++   K  +   A  +  
Sbjct: 430 VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLA 489

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+  G++P+   Y  LI A C   K+K++ +FF E I +G+  T  TY ++I G  R+G
Sbjct: 490 DMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNG 549

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A   F +M   GC PD ITY +LISG  K     +  + Y+ M   GI P   T  
Sbjct: 550 RVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFH 609

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
            L Y   K+G      +  E L   L       N +I     +  V M A+  H+ +  D
Sbjct: 610 PLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNV-MKAMSLHQQM-VD 667

Query: 640 QNVD 643
           Q VD
Sbjct: 668 QGVD 671



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 40/410 (9%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C +G +E AEEV  ++   GV     SY ++V AYC+ G V +A      M +RG   + 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   +I+ FC+ G    +  A   +  MV KG  P V T+  LI+G  +KG   + F  
Sbjct: 396 ITFNTVISKFCETG---EVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE- 451

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           FL  +     KPNV +Y ++I+  CK+ K+  AE++L  M  +G+ PN   Y  LI   C
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            +   + A+   D M + G    +  YN +I+GL + GRV++A +L  +   +    D I
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L+S + K   T++ L L+ +M   G+ P +  +  LI A CR++ +   +K FQE 
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEM 630

Query: 499 ITAGLFPT-----------------------------------KETYTSMICGYLRDGNI 523
           +   L P                                    K TY S+I  YLRD  +
Sbjct: 631 LQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRV 690

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           S        M   G  P   TY  LI GLC     + A  +Y  M+ +G+
Sbjct: 691 SEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 213/487 (43%), Gaps = 88/487 (18%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA    S M   G +    ++  L+    D       ++   +  +++  G +P+   
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSR---HFEKTLAVFADVIDSGTRPDAVA 159

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +   +         +K F L   +V+ D   P+V  Y  ++ G CK  ++  A  L + M
Sbjct: 160 YGKAVQAAVMLKDLDKGFELMKSMVK-DGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
            ++ ++PNT TY +LI G+CKVG  E A    + M ++    N+  YN++++GLC  GRV
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278

Query: 419 QEAYELLKK--------------AFQ--------------RELQADKITYTILL------ 444
            +A E+L +               F               +E++ D+ TY ILL      
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 445 -----------------------------SEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
                                        + + ++ + K+A+    +M + GL P+   +
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            T+I+ FC   ++  +E + +  +  G+ PT ETY S+I GY + G+     ++   M++
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP------------CEVTRVTL 583
            G  P+ I+YG+LI+ LCK  KL +A      MIG+G+SP            C ++++  
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           A+ +  +       +I   +D  L   T NTLI  L    RV  A   F ++ GK  N D
Sbjct: 519 AFRFFDE-------MIQSGIDATLV--TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 644 RVSLAAL 650
            ++  +L
Sbjct: 570 VITYNSL 576



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 182/447 (40%), Gaps = 63/447 (14%)

Query: 134 RLYIVCATSLISNGNFERAHEVM---------------QCMVSSFAEIGRLKEGFSMVIE 178
           R Y +    L   G  E+A EV+                 +V+++ + G +K+      +
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAE------------------------------ 208
           M   GL     T N V+   CE G V++AE                              
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445

Query: 209 -----EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
                E  DEM   G+  +  SY  ++   C+  ++ +A+  L+ M+ RG   +     +
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A C       +K AF   +EM++ G    + T+  LI+GL + G  +KA  LFL++ 
Sbjct: 506 LIEASCS---LSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMA 562

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                 P+V TY ++ISGY K     +   L ++MK  G+ P   T+  LIY   K G  
Sbjct: 563 -GKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV 621

Query: 384 ERAYDLMDLMGKE----GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                 MD M +E       P+ + YN +I    + G V +A  L ++   + +  DK+T
Sbjct: 622 T-----MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+  +L+     +   L   M   GL P +  Y  LI   C  K    +  +++E +
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMV 736

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSA 526
             GL         +I G   +G +  A
Sbjct: 737 ERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 155/350 (44%), Gaps = 5/350 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++ + + G     F  + EM   G+     +   ++   C+   +  AE V  +
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  RGV  +A  Y +++ A C + ++ +A R+   M+  G    +ATL    T     G 
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI---DATLVTYNTLINGLGR 547

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G +K+A +L  +M  KG  P+V T+  LI G  K   T+K   L+ K+ +    KP V 
Sbjct: 548 NGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKM-KILGIKPTVG 606

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+  +I   C++E +   + + + M +  L+P+   Y  +IY + + GN  +A  L   M
Sbjct: 607 TFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G   +   YN++I    +  RV E   L+     + L     TY IL+       + 
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
             A   +  MV+ GL  ++     LI+    +  ++E++    E    GL
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 5/277 (1%)

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A DL   M K+G  P+  + N ++  L      ++   +         + D + Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
            +   +   +  +   L   MVK G+ P + AY  ++   C+ +++K++ K F E I   
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY ++I GY + G I  A+ + +RM +     + +TY +L++GLC   ++D+A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSE 622
           +    M G G  P       L++ +    + A    + +  + ++  RT   L+  LC  
Sbjct: 283 EVLLEMEGSGFLPGGF----LSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
            R+  A     KL+       ++S   L NA C E +
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGD 375


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/643 (24%), Positives = 300/643 (46%), Gaps = 29/643 (4%)

Query: 17  SRTPSLTLFVI--RSLCYQTHHHNFLANSKQPAFS-STSSSPSPPQSLVKTVCSMVLESY 73
           +++PS+ L  +  R LC  T   +  A  +  A S ST+   +P   L +   S ++   
Sbjct: 6   TKSPSVLLLFLQPRRLC-GTAASSLPAAGELAAVSVSTTKELAPEDDLSEESRSRLVRDT 64

Query: 74  YQQFHLRSS-PPRLNLQID--IDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFR 130
            +    R S  P+L  Q+   +  L+  Q   V+ + A +  +  A  FF WA    ++R
Sbjct: 65  CRLLEQRGSWTPKLEAQLRHLLRVLSPPQVRAVLRAQA-QGDARAAFEFFRWADRQWQYR 123

Query: 131 HFMRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSM 175
           H   ++      L      + A  V++ M+                S++  G+L+    +
Sbjct: 124 HAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRV 183

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           +  M  +G     S  N  V +    G V+ A    D M   GV  D  +Y  ++   C 
Sbjct: 184 LQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCS 243

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKP 294
           + RV EA   +  ML  G   D  +   +++  C +     + +   LL  M    G   
Sbjct: 244 VRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEK---RVSEVRSLLATMRNDAGLLT 300

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +  T+ +LI  L K G  ++A   FL+      ++ +   Y+A++  +C   +M  A+ +
Sbjct: 301 DQVTYNMLIHVLAKHGHADEALE-FLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEI 359

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +  M  +   P+  TY++++ G C++G  ++A  +M  M K GC PNI  + A+++GLCK
Sbjct: 360 VGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCK 419

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G+  EA+ELL K+ +       ITY++++    ++ + K++  +  +M++ G  P    
Sbjct: 420 VGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVE 479

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
              LI A C++ K  E+++F ++  + G       +T++I G+ R G++ SA+     + 
Sbjct: 480 INLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLY 539

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                PD +TY  +++ L ++ +L EA    E M+ +G+ P  VT  T+ + YC++G   
Sbjct: 540 LSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVE 599

Query: 595 TAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLL 636
             + +L+ +  +  +++V N +I KLC+  ++  A     K+L
Sbjct: 600 ELVDLLDKMLARQELKSVYNQVIEKLCAFGKLNEAYGLLSKVL 642



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 188/427 (44%), Gaps = 25/427 (5%)

Query: 93  DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
           D +T+   I V   LA    +  AL F   + G  +FR     Y     S   NG    A
Sbjct: 301 DQVTYNMLIHV---LAKHGHADEALEFLRESEG-KRFRVDEVGYSAVVHSFCLNGRMAEA 356

Query: 153 HEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
            E++  M+S                F  IG + +   M+  M  NG      T   ++  
Sbjct: 357 KEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNG 416

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
            C++G    A E+ ++           +Y +++  + R G++ E+   ++ ML +G    
Sbjct: 417 LCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPT 476

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
              + LLI A C +G      +A E +E+   KG   NV   T +I G  ++G  E A  
Sbjct: 477 TVEINLLIHALCKEG---KPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALS 533

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L   L    N  P+V TYT +++   ++ ++  A  L+E+M  +GL+P   TY ++I+ +
Sbjct: 534 LLDDLY-LSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRY 592

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G  E   DL+D M       ++Y  N +I+ LC  G++ EAY LL K  +   Q D 
Sbjct: 593 CEKGTVEELVDLLDKMLARQELKSVY--NQVIEKLCAFGKLNEAYGLLSKVLRTASQRDA 650

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T  IL+   L +  T QA  + CRM +  L PD+     +      +++ + + K   +
Sbjct: 651 QTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVK 710

Query: 498 AITAGLF 504
            +  GL 
Sbjct: 711 FVERGLL 717


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 243/555 (43%), Gaps = 55/555 (9%)

Query: 126 FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLK---EGFSMVIEMTNN 182
            A++R F  +  V     + N N +  HE +  ++ ++AE G L    E +  V+E+ ++
Sbjct: 109 LARYRIFNEIEDVLGN--LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS 166

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
              +I    N ++ +  +   +  A +V+DEMC RG   D  S  ++V   C  G+V   
Sbjct: 167 VPDVIAC--NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            + +     +G I +      +I  +C     G I+ A+ + +E+  KG+ P + T   +
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCK---LGDIENAYLVFKELKLKGFMPTLETFGTM 281

Query: 303 IDGLCKKG-----------WTEKAFRL---FLKLVRSDNY-------------------- 328
           I+G CK+G             E+  R+   FL  +    Y                    
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KP+V TY  +I+  CKE K   A   L+   ++GL+PN  +Y  LI  +CK   ++ A  
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M + GC P+I  Y  +I GL   G + +A  +  K   R +  D   Y +L+S   
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K      A  LF  M+   + PD + Y TLI  F R     E+ K F  ++  G+     
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            + +MI G+ R G +  A+    RMN+    PD  TY  +I G  KQ  +  A + +  M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCS 621
                 P  VT  +L   +C QGD   A    E   K++ +R       T  TLIR L  
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMA----EETFKEMQLRDLVPNVVTYTTLIRSLAK 637

Query: 622 EKRVGMAALFFHKLL 636
           E      A+++ +L+
Sbjct: 638 ESSTLEKAVYYWELM 652



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 214/490 (43%), Gaps = 54/490 (11%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    M++ F + G       ++ E+   GL +    LN ++      G      E    
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + A     D ++Y +++   C+ G+   A  +L     +G I +N +   LI A+C    
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK- 394

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                 A +LL +M  +G KP++ T+ +LI GL   G  + A  + +KL+      P+  
Sbjct: 395 --EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-GVSPDAA 451

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK  +   A++L   M ++ +LP+   Y +LI G  + G+F+ A  +  L 
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G   ++  +NA+I G C+ G + EA   + +  +  L  DK TY+ ++  ++KQ + 
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A+ +F  M K    P++  YT+LI  FC Q   K +E+ F+E     L P   TYT++
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631

Query: 514 ICGYLRDGN-ISSAVKYFQRMNQIGCAPDNITYGALISG--------------------- 551
           I    ++ + +  AV Y++ M    C P+ +T+  L+ G                     
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQS 691

Query: 552 ----------------------------LCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                                       LC    +  AC F + M+ KG SP  V+   +
Sbjct: 692 SLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751

Query: 584 AYEYCKQGDS 593
            + +C  G+S
Sbjct: 752 LHGFCVVGNS 761



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 23/328 (7%)

Query: 155 VMQCMVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           V   ++  F   G   E    FS+ +E    G+ +     N ++   C  G+++ A    
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVE---KGVKVDVVHHNAMIKGFCRSGMLDEALACM 543

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M    +  D  +Y  ++  Y +   +  A +    M       +  T T LI  FC  
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC-- 601

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
             +G  K A E  +EM  +   PNV T+T LI  L K+  T +    + +L+ ++   PN
Sbjct: 602 -CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660

Query: 332 VHTYTAMISGYCKE---------EKMNRAEMLL-----ERMKEQGLLPNTNTYTSLIYGH 377
             T+  ++ G+ K+         +  N  +  L      RMK  G   +   Y S +   
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C  G  + A    D M K+G +P+  ++ AI+ G C  G  ++   +       +     
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVA 780

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVK 465
           + Y+ +L +HL Q    +A  +   MV+
Sbjct: 781 VRYSQVLEQHLPQPVICEASTILHAMVE 808


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 224/472 (47%), Gaps = 7/472 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L++  S + +M   G  L   + N ++    + G  + A EV+  M + G+     ++
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++VA  +   +      L  M   G   +  T T+ I      G  G I +A+ +++ 
Sbjct: 233 SALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVL---GRDGKIDEAYRIMKR 289

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P+V T+TVLID LC     + A  LF K+ +S ++KP+  TY  ++  +    
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM-KSSSHKPDKVTYVTLLDKFSDCG 348

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +++ E +   M+  G  P+  T+T L+   CK G    A+DL+D M K+G  PN++ YN
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GL +  R+ +A +L        ++    TY +L+  H K     +AL  F +M   
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P+I A    + +     ++ E++  F E  ++GL P   TY  M+  Y + G +  A
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +K    M+++ C PD I   +LI  L K  +++EA Q +  M    ++P  VT   L   
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588

Query: 587 YCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             K+G    A+ + ES++         T NTL+  LC    V +A   F+K+
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKM 640



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 204/439 (46%), Gaps = 4/439 (0%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           +K    ++ EM + GL     T    + +    G ++ A  +   M   G   D  +Y +
Sbjct: 245 IKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTV 304

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++ A C   ++ +A    + M       D  T   L+  F D G    +++ +    EM 
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWT---EME 361

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G+ P+V T T+L++ LCK G   +AF L L  +R     PN+HTY  +ISG  +  ++
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDL-LDTMRKQGVLPNLHTYNTLISGLLRANRL 420

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           + A  L   M+  G+ P   TY  LI  H K G+  +A +  + M   G  PNI A NA 
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +  L + GR+ EA  +  +     L  D +TY +++  + K  +  +A+ L   M K   
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD+    +LI    +  +++E+ + F       L PT  TY  ++ G  ++G I  AV+
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+ MN  GC+P+ IT+  L+  LCK  ++D A + +  M      P  +T  T+ + + 
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 589 KQGDSATAMIILESLDKKL 607
           KQ     A+ +   + K L
Sbjct: 661 KQNQIKNAIWLFHQMKKLL 679



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 171/361 (47%), Gaps = 5/361 (1%)

Query: 189  STLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            S L  ++ + C+      A  VF +     GV      Y L++  +  +  V  A     
Sbjct: 755  SVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFE 814

Query: 248  AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             M   G   D  T   LI A    G  G I + F+L +EM+ +G KPN  T+ ++I  L 
Sbjct: 815  EMKSAGCAPDTFTYNSLIDA---HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 308  KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            K    +KA  L+  LV  D + P   T+  +I G  K  +++ A  + + M   G  PN+
Sbjct: 872  KSNRLDKAMDLYYNLVSGD-FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNS 930

Query: 368  NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              Y  L+ G+ K+G+ + A +    M KEG  P++ +Y  ++D LC  GRV +A    +K
Sbjct: 931  AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990

Query: 428  AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              Q  L  D + Y ++++   +   T++AL LF  M   G+ PD++ Y +LI        
Sbjct: 991  LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050

Query: 488  MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            ++E+ K ++E    GL P   TY ++I GY   GN   A   +++M   GC P+  T+  
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQ 1110

Query: 548  L 548
            L
Sbjct: 1111 L 1111



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 40/409 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F++ G L +                                    E+++ EM A G
Sbjct: 340 LLDKFSDCGHLDK-----------------------------------VEKIWTEMEADG 364

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++ ++V A C+ GR+ EA   L  M  +G + +  T   LI+          + 
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA---NRLD 421

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L   M   G +P  YT+ +LID   K G   KA   F K+ ++    PN+    A 
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAPNIVACNAS 480

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    +  ++  A+ +   +K  GL P++ TY  ++  + KVG  + A  L+  M K  C
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++   N++ID L K GRV+EA+++  +  +  L    +TY ILL+   K+ + ++A+ 
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M   G +P+   + TL+   C+  ++  + K F +  T    P   T+ ++I G++
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           +   I +A+  F +M ++   PD++T   L+ G+ K  ++++A +  E 
Sbjct: 661 KQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITED 708



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 199/509 (39%), Gaps = 75/509 (14%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++   + G++++   +   M  +G    T T N ++   C+   V+ A ++F +M    
Sbjct: 585  LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               D  ++  ++  + +  ++  A  WL   + +    D+ TL  L+      G    I+
Sbjct: 645  CRPDVLTFNTIIHGFIKQNQIKNA-IWLFHQMKKLLRPDHVTLCTLLPGVIKSG---QIE 700

Query: 279  QAFELLEEMV--------RKGWKP---NVYTHT-------------------------VL 302
             AF + E+          R  W+     + T                            +
Sbjct: 701  DAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPI 760

Query: 303  IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            I  LCK   T  A  +F+K  +    KP +  Y  +I G+ +   +  A  L E MK  G
Sbjct: 761  IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI-------------- 408
              P+T TY SLI  H K G     +DL D M   GC PN   YN +              
Sbjct: 821  CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAM 880

Query: 409  ---------------------IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
                                 IDGL K GR+ +A+E+         + +   Y IL++ +
Sbjct: 881  DLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY 940

Query: 448  LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             K      A   F RMVK G+ PD+ +YT L+   C   ++ ++  +F++   AGL P  
Sbjct: 941  GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDL 1000

Query: 508  ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
              Y  MI G  R      A+  F  M   G  PD  TY +LI  L     ++EA + YE 
Sbjct: 1001 VAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060

Query: 568  MIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            +   G+ P   T   L   Y   G+S  A
Sbjct: 1061 LQFIGLKPNVFTYNALIRGYTLSGNSELA 1089



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 174/381 (45%), Gaps = 6/381 (1%)

Query: 196  GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGA 254
            GI  E G  E A    + +  R +C D S    ++   C+  + + A + ++    + G 
Sbjct: 728  GILTEAG-TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 255  ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                    LLI  F +     +++ A+ L EEM   G  P+ +T+  LID   K G   +
Sbjct: 787  KPTLKVYNLLIDGFLEVH---NVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843

Query: 315  AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
             F L+ +++ +   KPN  TY  +IS   K  ++++A  L   +      P   T+  LI
Sbjct: 844  LFDLYDEML-TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902

Query: 375  YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             G  K G  + A+++ D M   GC PN   YN +++G  K G V  A E  K+  +  ++
Sbjct: 903  DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962

Query: 435  ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
             D  +YTIL+           AL  F ++ +AGL+PD+ AY  +I    R ++ +E+   
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 495  FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            F E    G+ P   TY S+I      G I  A K ++ +  IG  P+  TY ALI G   
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTL 1082

Query: 555  QSKLDEACQFYESMIGKGISP 575
                + A   Y+ M+  G  P
Sbjct: 1083 SGNSELAYGIYKKMMVGGCDP 1103



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 46/298 (15%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI--- 339
           + + M R+  + NV T+ ++   L  +G   +A     K+ R   +  N ++Y  +I   
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM-REAGFVLNAYSYNGLIHFL 204

Query: 340 --SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
             SG+CKE     A  +  RM  +GL P+  T+++L+    K  N +    L++ M   G
Sbjct: 205 LQSGFCKE-----ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PNIY Y   I  L + G++ EAY ++K                               
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMK------------------------------- 288

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
               RM   G  PD+  YT LI A C  +K+ ++   F +  ++   P K TY +++  +
Sbjct: 289 ----RMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKF 344

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              G++    K +  M   G APD +T+  L++ LCK  +++EA    ++M  +G+ P
Sbjct: 345 SDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLP 402



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 151/325 (46%), Gaps = 4/325 (1%)

Query: 154  EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +V   ++  F E+  ++  +++  EM + G    T T N ++    + G +    +++DE
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 214  MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
            M  RG   +  +Y +++    +  R+ +A      ++         T   LI        
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS-- 908

Query: 274  RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             G +  A E+ + MV  G +PN   + +L++G  K G  + A   F ++V+ +  +P++ 
Sbjct: 909  -GRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVK-EGIRPDLK 966

Query: 334  TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +YT ++   C   +++ A    E++K+ GL P+   Y  +I G  +    E A  L   M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 394  GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
               G  P++Y YN++I  L   G ++EA ++ ++     L+ +  TY  L+  +     +
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086

Query: 454  KQALGLFCRMVKAGLNPDIHAYTTL 478
            + A G++ +M+  G +P+   +  L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 13/280 (4%)

Query: 359 KEQGLLPNT-------NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           K  G LPN        N    ++  H +V +    +DLM    ++    N+  Y  I   
Sbjct: 112 KSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQ---RQIIRRNVDTYLIIFKS 168

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L  +G +++A   L+K  +     +  +Y  L+   L+    K+AL ++ RMV  GL P 
Sbjct: 169 LFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPS 228

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  ++ L+ A  +++ +K      +E  + GL P   TYT  I    RDG I  A +  +
Sbjct: 229 LKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMK 288

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           RM+  GC PD +TY  LI  LC   KLD+A   +  M      P +VT VTL  ++   G
Sbjct: 289 RMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCG 348

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
                  I   ++   +   + T   L+  LC   R+  A
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEA 388



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 3/285 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           + + M+ Q +  N +TY  +       G   +A   ++ M + G   N Y+YN +I  L 
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           + G  +EA E+ ++     L+    T++ L+    K+   K  +GL   M   GL P+I+
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YT  I    R  K+ E+ +  +     G  P   TYT +I        +  A+  F +M
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 PD +TY  L+        LD+  + +  M   G +P  VT   L    CK G  
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 594 ATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             A  +L+++ K+     + T NTLI  L    R+  A   F  +
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 4/230 (1%)

Query: 144  ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
            + +G+F         ++    + GRL +   M   M + G    ++  N +V    +LG 
Sbjct: 886  LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 204  VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            V+ A E F  M   G+  D  SY ++V   C  GRV +A  +   +   G   D     L
Sbjct: 946  VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005

Query: 264  LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            +I      G     ++A  L  EM  +G  P++YT+  LI  L   G  E+A +++ +L 
Sbjct: 1006 MINGL---GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL- 1061

Query: 324  RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            +    KPNV TY A+I GY        A  + ++M   G  PNT T+  L
Sbjct: 1062 QFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 261/539 (48%), Gaps = 23/539 (4%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNF-ERAHEVMQCMVS------------- 161
           A  FF WA    ++RH   ++     SL+SN    + A  V++ M+              
Sbjct: 110 AFEFFRWADRQWRYRHAPEVFDE-MLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQL 168

Query: 162 --SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
             S++  G+L+    ++  M  +G     S  N  V +    G V+ A E  + M   GV
Sbjct: 169 MLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGV 228

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++   C   RV +A   +  ML  G   D  +   +++  C +     +++
Sbjct: 229 EPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEK---RVEE 285

Query: 280 AFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              LL+ M    G  P+  T+ VLI GL K G  ++A   FL+      ++ +   Y+A+
Sbjct: 286 VRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE-FLRESEGKRFRVDEVGYSAI 344

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +C   +M  A+ ++  M  +G  P+  TY++++ G C++G  ++A  +M  M K  C
Sbjct: 345 VHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 404

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   + A+++GLCK G+  EA+ELL K+ +       ITY++++    ++ + K++  
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 464

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M++ G  P       LI A C+ +K  E++ F ++  + G       +T++I G+ 
Sbjct: 465 VVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 524

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G++ SA+     M      PD +TY  ++  L K+ +L EA    E M+ +G+ P  V
Sbjct: 525 RQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPV 584

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLL 636
           T  T+ + YC++G+    + +LE +  +  +++  N ++ KLC+  ++  A    +K+L
Sbjct: 585 TYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 170/416 (40%), Gaps = 74/416 (17%)

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G   +AF  F    R   Y+     +  M+S        + A  ++  M  +G+   T 
Sbjct: 104 RGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTE 163

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI-------------------------- 402
            +  L+  + + G    A  ++ LM K+GC P+I                          
Sbjct: 164 QFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 403 ---------YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                    Y YN +I GLC   RV +A E++    Q     DKI+Y  ++S   K+   
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283

Query: 454 KQALGLFCRMVK-AGLNPD-------IH----------------------------AYTT 477
           ++  GL  RM   AGL PD       IH                             Y+ 
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++ +FC   +M E+++   E I+ G  P   TY++++ G+ R G +  A K  + M +  
Sbjct: 344 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 403

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATA 596
           C P+ +T+ AL++GLCK  K  EA +       +  +P ++T   + + + ++G    + 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 597 MIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++++ L K  +  TV  N LI  LC +++   A  F  +   K   ++ V+   +
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTV 519



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 169/386 (43%), Gaps = 22/386 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            ++  LA    +  AL F   + G  +FR     Y     S   NG    A E++  M+S
Sbjct: 308 VLIHGLAKHGHADEALEFLRESEG-KRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMIS 366

Query: 162 ---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                           F  IG L +   M+  M  N     T T   ++   C++G    
Sbjct: 367 KGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSE 426

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ ++           +Y +++  + R G++ E+   +  ML +G       + LLI 
Sbjct: 427 AWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIH 486

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C         +A + +E+   KG   NV   T +I G  ++G  E A  L   +  S 
Sbjct: 487 ALCKDR---KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS- 542

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+V TYT ++    K+ ++  A  L+E+M  +G+LP   TY ++I+ +C+ GN E  
Sbjct: 543 NRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDL 602

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L++ M       +  AYN +++ LC  G++ EAY LL K  +     D  T  IL+  
Sbjct: 603 LNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMES 660

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDI 472
            L +    QA  + CRM +  L PD+
Sbjct: 661 FLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 230/473 (48%), Gaps = 10/473 (2%)

Query: 167 GRLKEGFSMVIEM--TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           G L E  +M+  M  +    P    + N V+      G    A +VFDEM  RGV  +  
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  M+  + + G +    R    ML  G   +  T  +L++  C  G    + +   L+
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAG---RMDETRALM 288

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM      P+ +T+++L DGL + G +     LF + ++        +T + +++G CK
Sbjct: 289 DEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK-GVIIGAYTCSILLNGLCK 347

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           + K+ +AE +LE +   GL+P T  Y +LI G+C+V + + A+ + + M      P+   
Sbjct: 348 DGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHIT 407

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YNA+I+GLCK   + EA +L+ +  +  +     T+  L+  + +  + ++   +   M 
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+  ++ ++ +++ AFC+  K+ E+     + I   + P  + Y S+I  Y+  G   
Sbjct: 468 DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTE 527

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A    ++M   G +    TY  L+ GLCK S++DEA +   ++  +G+ P  V+  T+ 
Sbjct: 528 QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587

Query: 585 YEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRV-GMAALFFH 633
              C +GD+  A+ +L+ +   D +  +RT + L+  L S  RV  M  L+ H
Sbjct: 588 SACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQH 640



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 184/385 (47%), Gaps = 7/385 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           ++  LL+ +    G    ++ AF LL   V  G +P+ +     +      G  ++A  +
Sbjct: 124 SSCNLLLESLLSVGRHADVRAAFGLL---VAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 319 FLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
             ++ RS+   P +  +Y  +I+G  +  K + A  + + M ++G+ PN  TY ++I GH
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K G+ E  + L D M ++G  PN+  YN ++ GLC+ GR+ E   L+ +     +  D 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY+IL     +  +++  L LF   +K G+    +  + L+   C+  K+ ++E+  + 
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL PT   Y ++I GY +  ++  A   F++M      PD+ITY ALI+GLCK   
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DK--KLWIRTVNT 614
           + EA      M   G+ P   T  TL   Y + G       +L  + DK  K  + +  +
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKD 639
           +++  C   ++  A      ++ KD
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKD 505



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 176 VIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           V+EM  + GL   T+  N ++   C++  ++ A  +F++M +R +  D  +Y  ++   C
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           +M  +TEA+  +  M   G      T   LI A+   G  G +++ F +L +M  KG K 
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAY---GRAGQLEKCFTVLSDMQDKGIKS 473

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV +   ++   CK G   +A  +   ++  D   PN   Y ++I  Y +     +A +L
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKD-VVPNAQVYNSIIDAYIESGGTEQAFLL 532

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +E+MK  G+  +  TY  L+ G CK    + A +L+  +  +G  P++ +YN II   C 
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG    A ELL++  + +++    TY  LLS             L+  MV   + P    
Sbjct: 593 KGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSI 652

Query: 475 YTT 477
           Y T
Sbjct: 653 YGT 655



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 146/303 (48%), Gaps = 4/303 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++ + ++  L+  FS+  +M +  +     T N ++   C++ ++  AE++  EM
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV     ++  ++ AY R G++ +    LS M D+G   +  +   ++ AFC     
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKN--- 488

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I +A  +L++M+ K   PN   +  +ID   + G TE+AF L  K+ +S     ++ T
Sbjct: 489 GKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM-KSSGVSASIFT 547

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++ G CK  +++ AE L+  +  QGL P+  +Y ++I   C  G+ +RA +L+  M 
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K    P +  Y+ ++  L   GRV +   L +    + ++     Y        K A  K
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLK 667

Query: 455 QAL 457
           + +
Sbjct: 668 KEM 670



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 7/237 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++   ++  + E   +V+EM  +G+     T N ++      G +E    V  
Sbjct: 405 HITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLS 464

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+ ++  S+  +V A+C+ G++ EA   L  M+ +  + +      +I A+ +  
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIES- 523

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G  +QAF L+E+M   G   +++T+ +L+ GLCK    ++A  L   L  +   +P+V
Sbjct: 524 --GGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT-NQGLRPDV 580

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +Y  +IS  C +   +RA  LL+ M +  + P   TY  L+     +G+  R +D+
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLL---SALGSAGRVHDM 634



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 10/215 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +F + G++ E  +++ +M +  +       N ++    E G  E A  + ++M + G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A   +Y L++   C+  ++ EA+  +  + ++G   D  +   +I+A C+K   G   
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK---GDTD 597

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL+EM +   +P + T+  L+  L   G       L+  +V       NV   +++
Sbjct: 598 RALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK-----NVEPSSSI 652

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
               C+ E  ++   L + M E+G+  +    T+L
Sbjct: 653 YGTRCENE--SKVASLKKEMSEKGIAFDDTERTNL 685


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 261/539 (48%), Gaps = 23/539 (4%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNF-ERAHEVMQCMVS------------- 161
           A  FF WA    ++RH   ++     SL+SN    + A  V++ M+              
Sbjct: 110 AFEFFRWADRQWRYRHAPEVFDE-MLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQL 168

Query: 162 --SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
             S++  G+L+    ++  M  +G     S  N  V +    G V+ A E  + M   GV
Sbjct: 169 MLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGV 228

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y  ++   C   RV +A   +  ML  G   D  +   +++  C +     +++
Sbjct: 229 EPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEK---RVEE 285

Query: 280 AFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
              LL+ M    G  P+  T+ VLI GL K G  ++A   FL+      ++ +   Y+A+
Sbjct: 286 VRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE-FLRESEGKRFRVDEVGYSAI 344

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +C   +M  A+ ++  M  +G  P+  TY++++ G C++G  ++A  +M  M K  C
Sbjct: 345 VHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 404

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   + A+++GLCK G+  EA+ELL K+ +       ITY++++    ++ + K++  
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 464

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M++ G  P       LI A C+ +K  E++ F ++  + G       +T++I G+ 
Sbjct: 465 VVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 524

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G++ SA+     M      PD +TY  ++  L K+ +L EA    E M+ +G+ P  V
Sbjct: 525 RQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPV 584

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLL 636
           T  T+ + YC++G+    + +LE +  +  +++  N ++ KLC+  ++  A    +K+L
Sbjct: 585 TYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 170/416 (40%), Gaps = 74/416 (17%)

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G   +AF  F    R   Y+     +  M+S        + A  ++  M  +G+   T 
Sbjct: 104 RGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTE 163

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI-------------------------- 402
            +  L+  + + G    A  ++ LM K+GC P+I                          
Sbjct: 164 QFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 403 ---------YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                    Y YN +I GLC   RV +A E++    Q     DKI+Y  ++S   K+   
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283

Query: 454 KQALGLFCRMVK-AGLNPD-------IH----------------------------AYTT 477
           ++  GL  RM   AGL PD       IH                             Y+ 
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++ +FC   +M E+++   E I+ G  P   TY++++ G+ R G +  A K  + M +  
Sbjct: 344 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 403

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATA 596
           C P+ +T+ AL++GLCK  K  EA +       +  +P ++T   + + + ++G    + 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 597 MIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++++ L K  +  TV  N LI  LC +++   A  F  +   K   ++ V+   +
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTV 519



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 169/386 (43%), Gaps = 22/386 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            ++  LA    +  AL F   + G  +FR     Y     S   NG    A E++  M+S
Sbjct: 308 VLIHGLAKHGHADEALEFLRESEG-KRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMIS 366

Query: 162 ---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                           F  IG L +   M+  M  N     T T   ++   C++G    
Sbjct: 367 KGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSE 426

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ ++           +Y +++  + R G++ E+   +  ML +G       + LLI 
Sbjct: 427 AWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIH 486

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C         +A + +E+   KG   NV   T +I G  ++G  E A  L   +  S 
Sbjct: 487 ALCKDR---KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS- 542

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+V TYT ++    K+ ++  A  L+E+M  +G+LP   TY ++I+ +C+ GN E  
Sbjct: 543 NRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDL 602

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L++ M       +  AYN +++ LC  G++ EAY LL K  +     D  T  IL+  
Sbjct: 603 LNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMES 660

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDI 472
            L +    QA  + CRM +  L PD+
Sbjct: 661 FLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 231/462 (50%), Gaps = 12/462 (2%)

Query: 163 FAEIGRLKEGFSMVIE----MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ +   K+ F++V++    M  NG+     TLN ++   C      +A  V  ++   G
Sbjct: 72  FSGVASTKQ-FNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 130

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D +++  ++   C   +V+EA   ++ M++ G   +  T   ++   C  G      
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSG---DTS 187

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL +M  +  K +V+T++ +ID LC+ G  + A  LF K + +   K ++ TY ++
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSLVTYNSL 246

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CK  K N    LL+ M  + ++PN  T+  LI    K G  + A +L   M  +G 
Sbjct: 247 VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN   YN+++DG C + R+ EA  +L    +     D +T+T L+  + K     + + 
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF ++ K GL  +   Y+ L+  FC+  K++ +E+ FQE ++ G+ P   TY  ++ G  
Sbjct: 367 LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLC 426

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A++ F+ + +     D + Y  +I G+CK  K+++A   + S+  KG+ P  +
Sbjct: 427 DNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 486

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIR 617
           T   +    CK+G  + A I+L  +++   +    T NTLIR
Sbjct: 487 TYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIR 528



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 189/352 (53%), Gaps = 4/352 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + ++   C  G ++ A  +F EM  +G+ +   +Y  +V   C+ G+  +  + L  M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             R  I +  T  +LI  F  +G    +++A EL +EM+ KG  PN  T+  L+DG C +
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEG---KLQEANELYKEMITKGISPNTITYNSLMDGYCMQ 323

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               +A  +   +VR +N  P++ T+T++I GYCK ++++    L  ++ ++GL+ NT T
Sbjct: 324 NRLSEANNMLDLMVR-NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+ G C+ G  E A +L   M   G  P++  Y  ++DGLC  G++++A E+ +   
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           + ++  D + YTI++    K  + + A  LFC +   G+ P++  YT +I+  C++  + 
Sbjct: 443 KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 502

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           E+    ++    G  P   TY ++I  +LRDG+++++ K  + M   G + D
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 203/441 (46%), Gaps = 20/441 (4%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++ E   +V  M  NG      T N +V   C+ G    A ++  +M  R V AD  +Y 
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++ + CR G +  A      M  +G      T   L+   C  G         +LL++M
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAG---KWNDGVQLLKDM 266

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +   PNV T  VLID   K+G  ++A  L+ +++ +    PN  TY +++ GYC + +
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI-TKGISPNTITYNSLMDGYCMQNR 325

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  +L+ M      P+  T+TSLI G+CKV   +    L   + K G   N   Y+ 
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++ G C+ G+++ A EL ++     +  D +TY ILL       + ++AL +F  + K+ 
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +N DI  YT +I   C+  K++++   F      G+ P   TYT MI G  + G++S A 
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 505

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
              ++M + G  P++ TY  LI    +   L  + +  E M   G S             
Sbjct: 506 ILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS------------- 552

Query: 588 CKQGDSATAMIILESLDKKLW 608
               D+++  ++++ L   +W
Sbjct: 553 ---ADASSIKMVIDMLSSAVW 570



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 181/369 (49%), Gaps = 4/369 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             +  ++M   G   N+YT  ++I+  C+   T  A+ +  K+++   Y+P+  T+  +I
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-GYEPDTTTFNTLI 142

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C E K++ A +L+ RM E G  PN  TY S++ G CK G+   A DL+  M +    
Sbjct: 143 NGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVK 202

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +++ Y+ IID LC+ G +  A  L K+   + +++  +TY  L+    K  +    + L
Sbjct: 203 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQL 262

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M    + P++  +  LI  F ++ K++E+ + ++E IT G+ P   TY S++ GY  
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM 322

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A      M +  C+PD +T+ +LI G CK  ++DE  + +  +  +G+    VT
Sbjct: 323 QNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382

Query: 580 RVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L   +C+ G    A  + +   SL     + T   L+  LC   ++  A   F  L 
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442

Query: 637 GKDQNVDRV 645
               N+D V
Sbjct: 443 KSKMNLDIV 451



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 171/362 (47%), Gaps = 4/362 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF +++RS    P++  ++   SG    ++ N      ++M+  G+  N  T   
Sbjct: 47  DDAIDLFQEMIRSRPL-PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNI 105

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   C+      AY ++  + K G  P+   +N +I+GLC + +V EA  L+ +  +  
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            Q + +TY  +++   K  +T  AL L  +M +  +  D+  Y+T+I + CR   +  + 
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             F+E  T G+  +  TY S++ G  + G  +  V+  + M      P+ IT+  LI   
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
            K+ KL EA + Y+ MI KGISP  +T  +L   YC Q   + A  +L+ + +      I
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T  +LI+  C  KRV      F K+  +    + V+ + L     +S K  +  +L Q 
Sbjct: 346 VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQE 405

Query: 670 IA 671
           + 
Sbjct: 406 MV 407



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 7/240 (2%)

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           ++ Y   L   +   +   A+ LF  M+++   P +  ++   +     K+      F +
Sbjct: 30  RVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCK 89

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +    G+     T   MI  + R      A     ++ ++G  PD  T+  LI+GLC +S
Sbjct: 90  KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLES 149

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
           K+ EA      M+  G  P  VT  ++    CK GD++ A+ +L  +D+   K  + T +
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
           T+I  LC +  +  A   F ++  K      V+  +L     ++ K+     L  D++ R
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 18/386 (4%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+EV   +C         +Y +++ + C  GR+      L  ++ +G  +D    T L+ 
Sbjct: 84  ADEVTPNLC---------TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134

Query: 267 AFC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             C DK        A ++ L  M + G  PNV+++ +L+ GLC +  +++A  L L+++ 
Sbjct: 135 GLCADK----RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMP 189

Query: 325 SD--NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            D  +  P+V +YT +I+G+ KE  +++A      M ++G+LPN  TY+S+I   CK   
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A +++  M K G  PN   YN+I+ G C  G+ +EA   LKK     ++ D +TY  
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K     +A  +F  M K GL P+I  Y TL+  +  +  + E        +  G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P    ++ +IC Y + G +  A+  F +M Q G  PD +TYG +I  LCK  ++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYC 588
           +++E MI + +SP  +   +L +  C
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLC 455



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 197/379 (51%), Gaps = 7/379 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSA 248
           T   ++G  C  G ++        +  +G   DA ++  ++   C   R ++A D  L  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGL 306
           M   G I +  +  +L+   CD+      ++A ELL+ M   G    P+V ++T +I+G 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDEN---RSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K+G  +KA+  + +++      PNV TY+++I+  CK + M++A  +L  M + G++PN
Sbjct: 210 FKEGDLDKAYGTYHEML-DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY S+++G+C  G  + A   +  M  +G  P++  YN+++D LCK GR  EA ++  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              +R L+ +  TY  LL  +  +    +  GL   MV+ G++P+ + ++ LI A+ +Q 
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+ ++   F +    GL P   TY ++I    + G +  A++YF++M     +P NI Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 547 ALISGLCKQSKLDEACQFY 565
           +LI  LC   K D+A  ++
Sbjct: 449 SLIHSLCIFDKWDKAKDYF 467



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 5/212 (2%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
           TS++ NG           +V  +   G+ KE    + +M ++G+     T N ++   C+
Sbjct: 258 TSMVKNGVMPNC-RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G    A ++FD M  RG+  + ++Y  ++  Y   G + E    L  M+  G   ++  
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            ++LI A+  +   G + QA  +  +M ++G  P+  T+  +I  LCK G  E A R F 
Sbjct: 377 FSILICAYAKQ---GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +++  +   P    Y ++I   C  +K ++A+
Sbjct: 434 QMI-DERLSPGNIVYNSLIHSLCIFDKWDKAK 464


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 264/556 (47%), Gaps = 49/556 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   ++G + E   ++  M  +G+         +V   C+ G  + A + F ++   G
Sbjct: 430 LINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSG 489

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A++  +  ++ ++ R G + EA+++   M       D A+   +I ++C    RG++ 
Sbjct: 490 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ---RGNVL 546

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLC------------------------------- 307
           +AF + + MVR GW P++ T+  L+ GLC                               
Sbjct: 547 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 606

Query: 308 ----KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               K G  ++A  L  K+V + N  P+ +TYT ++ G+CK  K+  A +LL+ M E+GL
Sbjct: 607 VGICKHGTLDEALDLCEKMV-TRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGL 665

Query: 364 LPNTNTYTSLIYGHCKVGNFERA-YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           +P+T  YT L+ G    G  + A Y   +++ KEG   +  AYN++++G  K G++ E  
Sbjct: 666 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 725

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L++   + E+     +Y IL+  ++K+ +  + L L+  MVK G+ PD   Y  LI   
Sbjct: 726 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 785

Query: 483 CRQKKMKESEKFFQEAI--TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           C    ++ + KF ++ +   +GL P    Y ++I    R G+I  A +  + M  +G  P
Sbjct: 786 CEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVP 845

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ---GDSATAM 597
             +   +++ GLCK  K++EA   + S++  G+ P   T  TL +  CK+    D+    
Sbjct: 846 SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 905

Query: 598 IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
            ++ES   K+ + T N LI  LC++K +  A   + ++  K    +  +   L  A Y +
Sbjct: 906 QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYAT 965

Query: 658 ----NKYALFSDLSQR 669
               +   L  D+  R
Sbjct: 966 GTMQDGEKLLKDIEDR 981



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 5/429 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++ S+ + G + E FS+   M  +G P    T   ++   C+ G +  A+E    +  
Sbjct: 533 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 592

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +    D  +   ++V  C+ G + EA      M+ R  + D  T T+L+  FC    RG 
Sbjct: 593 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK---RGK 649

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I  A  LL+ M+ KG  P+   +T L++GL  +G  + A  +F +++  +    +   Y 
Sbjct: 650 IVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 709

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +M++GY K  ++N  E L+  M E  + P++ +Y  L++G+ K G   R   L   M KE
Sbjct: 710 SMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 769

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE--LQADKITYTILLSEHLKQAETK 454
           G  P+   Y  +I GLC+ G ++ A + L+K    E  LQ     Y  L++   +  +  
Sbjct: 770 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDID 829

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L   M   G+ P   A ++++   C+  K++E+   F   + AG+ PT  T+T+++
Sbjct: 830 GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 889

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  ++  I  A    Q M   G   D +TY  LI+GLC +  + +A   YE M  KG+ 
Sbjct: 890 HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 949

Query: 575 PCEVTRVTL 583
           P   T +TL
Sbjct: 950 PNITTYITL 958



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 23/484 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S    G+L +  SM+ +M N  LP    T N ++    + G  + A  + D+M   G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD  +Y +M+   C++ R   A   L  M +     D  +   LI  F  +G    I 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG---KIN 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +  +M+R+  KP+V T+T LIDG C+ G T++A R+                Y   
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL---------------YEMQ 396

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G  +  ++++A+ +L+ M   G+ P+  TY++LI G CK+G      +++  M K G 
Sbjct: 397 ITG-VRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 455

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++   CK G  +EA +     ++  L A+ + +  LL    ++    +A  
Sbjct: 456 LPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 515

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M +  ++ D+ ++  +I ++C++  + E+   +   +  G  P   TY S++ G  
Sbjct: 516 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 575

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G++  A ++   + +  CA D  T   L+ G+CK   LDEA    E M+ + I P   
Sbjct: 576 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 635

Query: 579 TRVTLAYEYCKQGDSATAMIILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
           T   L   +CK+G    A+I+L+  L+K L   T+    L+  L +E +V  A+  F ++
Sbjct: 636 TYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 695

Query: 636 LGKD 639
           + K+
Sbjct: 696 ICKE 699



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 198/452 (43%), Gaps = 46/452 (10%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRVT 240
           +GL  IT      V I  +  +   A  V   +   G  C+   S  L  ++ C    + 
Sbjct: 102 SGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLF 161

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDK-GFRGSIKQAFELLEEMVRKGWKPNVYTH 299
             D  ++A +  G +LD A        F D+ GF+ S+     +L  +V  G   + Y  
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIF----FMDECGFKASLFSCNNILNALV--GINKSEYV- 214

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                      W      LFLK      +  +V T   +++  C + K+++AE +L++MK
Sbjct: 215 -----------W------LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK 257

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               LPN  TY +++  + K G  + A  ++D M K G   ++Y YN +ID LCK  R  
Sbjct: 258 -NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            AY LLK+  +  L  D+ +Y  L+     + +   A+ +F +M++  L P +  YT LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             +CR  +  E+ +   E    G+ P +               +S A +  + M   G  
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPRE---------------VSKAKQILKCMLADGID 421

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD ITY ALI+G+CK   + E  +    M   G+ P  V   TL + +CK G +  A+  
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481

Query: 600 LESLDKKLWIRTVNTLIRK--LCSEKRVGMAA 629
              + +   +   N++I    LCS  R GM A
Sbjct: 482 FVDIYRSGLV--ANSVIHNALLCSFYREGMIA 511



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 5/350 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM-CAR 217
           ++  F + G++     ++  M   GL   T     ++      G V+ A  +F E+ C  
Sbjct: 640 LLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 699

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+ AD  +Y  M+  Y + G++ E +R +  M +      +A+  +L+  +  KG    +
Sbjct: 700 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG---QL 756

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT-YT 336
            +   L  +MV++G KP+  T+ +LI GLC+ G  E A +   K+V  ++     HT Y 
Sbjct: 757 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYI 816

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           A+I+  C+   ++ A  L E MK  G++P+    +S++ G CK G  E A  +   + + 
Sbjct: 817 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 876

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P I  +  ++ GLCK+ ++ +A+ L +      L+ D +TY +L++    +     A
Sbjct: 877 GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 936

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           L L+  M   GL P+I  Y TL  A      M++ EK  ++    G+ P+
Sbjct: 937 LDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 199/403 (49%), Gaps = 10/403 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +  L+I A C   F   + +A E+   M  +   P+ YT+  L+DGLCK+   ++A  L 
Sbjct: 189 SFNLVIKALCKLRF---VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV-LL 244

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++S+   P+   Y  +I G CK+  + R   L++ M  +G +PN  TY +LI+G C 
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L++ M    C PN   Y  +I+GL K+ R  +A  LL    +R    ++  
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y++L+S   K+ + ++A+ L+ +M + G  P+I  Y+ L+   CR+ K  E+++     I
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
            +G  P   TY+S++ G+ + G    AV+ ++ M++ GC+ +   Y  LI GLC   ++ 
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA------MIILESLDKKLWIRTVN 613
           EA   +  M+  GI P  V   ++    C  G    A      M+  E    +  + T N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            L+  LC +K +  A    + +L +  + D ++     N   E
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 228/533 (42%), Gaps = 79/533 (14%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+  F+  +   + +  ++ +      +I+ G + R  E    +V+S           +M
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS-----------NM 179

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            + ++ NGL     + N V+   C+L  V+ A EVF  M  R    D  +Y  ++   C+
Sbjct: 180 NMNISPNGL-----SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
             R+ EA   L  M   G         +LI   C KG    + +  +L++ M  KG  PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG---DLTRVTKLVDNMFLKGCVPN 291

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
             T+  LI GLC KG  +KA  L  ++V S    PN  TY  +I+G  K+ +   A  LL
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLL 350

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+E+G   N + Y+ LI G  K G  E A  L   M ++GC PNI  Y+ ++DGLC++
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G+  EA E+L +        +  TY+ L+    K    ++A+ ++  M K G + +   Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI---CGY--------------- 517
           + LI   C   ++KE+   + + +T G+ P    Y+S+I   CG                
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530

Query: 518 ---------------LRDG-----NISSAVKYFQRMNQIGCAPDNITYGA---------- 547
                          L DG     +IS AV     M   GC PD IT             
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590

Query: 548 -----------LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
                      L+  L K+ ++  AC   E M+GK ++P   T   +  E CK
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 56/432 (12%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   ++ EM + G        N ++   C+ G +    ++ D M  +G   +  +Y 
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C  G++ +A   L  M+    I ++ T   LI     K  R +   A  LL  M
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV-KQRRAT--DAVRLLSSM 353

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G+  N + ++VLI GL K+G  E+A  L+ K+      KPN+  Y+ ++ G C+E K
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGK 412

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            N A+ +L RM   G LPN  TY+SL+ G  K G  E A  +   M K GC+ N + Y+ 
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472

Query: 408 IIDGLCKKGRVQEAYELLKKAF-------------------------------------- 429
           +IDGLC  GRV+EA  +  K                                        
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           + + Q D +TY ILL     Q +  +A+ L   M+  G +PD+    T +     +    
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +  + F E +   L              L+   +S A    + M     AP   T+  ++
Sbjct: 593 DKGRSFLEELVVRL--------------LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638

Query: 550 SGLCKQSKLDEA 561
             +CK  K++ A
Sbjct: 639 REICKPKKINAA 650



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/343 (18%), Positives = 129/343 (37%), Gaps = 67/343 (19%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           +EK F+   K+    ++K    T ++MI  Y      +  E LL R++ +  +    ++ 
Sbjct: 60  SEKMFKSAPKM---GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI 116

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +   + K    ++A DL   M  E  C  ++ ++N++++ +  +G      E       
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF------ 170

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                    Y  +++ ++                   ++P+  ++  +I A C+ + +  
Sbjct: 171 ---------YDYVVNSNMNM----------------NISPNGLSFNLVIKALCKLRFVDR 205

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + + F+        P   TY +++ G  ++  I  AV     M   GC+P  + Y  LI 
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           GLCK+  L    +  ++M  KG  P EVT                               
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVT------------------------------- 294

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             NTLI  LC + ++  A     +++      + V+   L N 
Sbjct: 295 -YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 28/211 (13%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           GL E A +V+ EM   G   +   Y +++   C +GRV EA    S ML  G   D    
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMV---RKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           + +I   C  G   S+  A +L  EM+       +P+V T+ +L+DGLC +    +A  L
Sbjct: 506 SSIIKGLCGIG---SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562

Query: 319 FLKLVRSDNYKPNVHTYTAMI------SGYC---------------KEEKMNRAEMLLER 357
              ++      P+V T    +      S  C               K ++++ A  ++E 
Sbjct: 563 LNSML-DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           M  + L P T+T+  ++   CK      A D
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAAID 652


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 213/432 (49%), Gaps = 5/432 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +    ++  E    G+ ++  T + ++   C+ G +E AEEV  +    G+      +
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V  YC++G + +A   +  M   G   ++ T   L+  FC+     ++++A + +++
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCE---MKNMEEAEKCIKK 452

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV KG  PNV T+  LIDG  +    ++ F++ L+ +     KPNV +Y  +I+  CK+ 
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI-LEEMEKKGLKPNVISYGCLINCLCKDA 511

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +  AE++L  M  +G++PN   Y  LI G C  G  + A+   D M      P +  YN
Sbjct: 512 NILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+GLCKKG+V EA  L  +  ++ L  D ITY  L+S +      ++AL L+  M K+
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P ++ Y  LIA  C ++ +   EK +QE +   L P +  Y ++I  Y+  G++  A
Sbjct: 632 GIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA 690

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
                 M   G  PD +TY  LI G  K+ ++ +       M  +G+ P   T   L   
Sbjct: 691 CSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750

Query: 587 YCKQGDSATAMI 598
           +CK  D   A +
Sbjct: 751 HCKLKDFDGAYV 762



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 239/498 (47%), Gaps = 7/498 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + +  ++G LK    ++  M   G+       N V+G  C+   ++ AE++FDEM  R V
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             +  +Y  ++  YC++G++ EA      M          T   L+   C       +++
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQM---MEE 305

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  +LEEM   G+ P+ +T+T L DG  K G  + +  L  + VR    +   +T + ++
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK-GVQILDYTCSILL 364

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +  CKE  M +AE +L++  E GL P    + +++ G+C+VG+  +AY  ++ M   G  
Sbjct: 365 NALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLR 424

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   YN+++   C+   ++EA + +KK  ++ +  +  TY  L+  + +     +   +
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M K GL P++ +Y  LI   C+   + E+E    + +  G+ P  + Y  +I G   
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCI 544

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A ++F  M      P  +TY  LI+GLCK+ K+ EA      +  KG+S   +T
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVIT 604

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKL--CSEKRVGMAALFFHKLLG 637
             +L   Y   G+   A+ + E++ K     T+NT  R +  C ++ + +    + ++L 
Sbjct: 605 YNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQ 664

Query: 638 KDQNVDRVSLAALKNACY 655
            +   DRV   AL + CY
Sbjct: 665 MNLVPDRVIYNALIH-CY 681



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 237/495 (47%), Gaps = 7/495 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  +E   + E   + + M  +G+    ++LN  +         E   ++F E+   G
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y   + A  ++G +  A   ++ M   G         ++I   C +     +K
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK---RMK 234

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L +EM+ +   PN  T+  LIDG CK G  E+AF +  ++ + +N +P + T+ ++
Sbjct: 235 DAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM-KVENVEPTIITFNSL 293

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C+ + M  A+ +LE M+  G +P+  TYT+L  GH K GN + +  L +   ++G 
Sbjct: 294 LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
               Y  + +++ LCK+G +++A E+LKK  +  L    + +  +++ + +  +  +A  
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              +M   GL P+   Y +L+  FC  K M+E+EK  ++ +  G+ P  ETY ++I GY 
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R        +  + M + G  P+ I+YG LI+ LCK + + EA      M+ +G+ P   
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQ 533

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKL 635
               L    C  G    A    + +  +  + T+   N LI  LC + +V  A     ++
Sbjct: 534 IYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI 593

Query: 636 LGKDQNVDRVSLAAL 650
             K  + D ++  +L
Sbjct: 594 TRKGLSFDVITYNSL 608



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 21/445 (4%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G+ +RA E+M CM               +    +  R+K+   +  EM +  +     T 
Sbjct: 196 GDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITY 255

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++G +E A  + + M    V     ++  ++   CR   + EA R L  M  
Sbjct: 256 NTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV 315

Query: 252 RGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            G + D  T T L     D   + G++  +  L EE VRKG +   YT ++L++ LCK+G
Sbjct: 316 YGFVPDRFTYTTLF----DGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEG 371

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             EKA  +  K +  +   P    +  +++GYC+   +N+A   +E+M+  GL PN  TY
Sbjct: 372 NMEKAEEVLKKFLE-NGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            SL+   C++ N E A   +  M ++G  PN+  YN +IDG  +       +++L++  +
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           + L+ + I+Y  L++   K A   +A  +   MV  G+ P+   Y  LI   C   K+K+
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +FF E +   + PT  TY  +I G  + G +  A      + + G + D ITY +LIS
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
           G      + +A + YE+M   GI P
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKP 635



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 212/455 (46%), Gaps = 28/455 (6%)

Query: 141 TSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
            +L   GN E+A EV++                +V+ + ++G + + ++ + +M   GL 
Sbjct: 365 NALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLR 424

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
               T N +V   CE+  +E AE+   +M  +GV  +  +Y  ++  Y R        + 
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L  M  +G   +  +   LI   C      +I +A  +L +MV +G  PN   + +LIDG
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDA---NILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            C  G  + AFR F ++V  +   P + TY  +I+G CK+ K+  AE L   +  +GL  
Sbjct: 542 SCIAGKLKDAFRFFDEMVARE-IVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY SLI G+   GN ++A +L + M K G  P +  Y+ +I G  K+G V     L+
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-----LV 655

Query: 426 KKAFQRELQ----ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           +K +Q  LQ     D++ Y  L+  +++  + ++A  L   M   G+ PD   Y  LI  
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             ++ +M + +    +    GL P  ETY  +I G+ +  +   A  +++ M + G  P 
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
                 LI+GL ++ +  +A      M  KG   C
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMKGKDDC 810



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           M+++ C   ++      L  ++ +  +L + A+L L + +          +   +L  E+
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTK---RYEDTLQLFSEI 173

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V  G +P+ + +   I    K G  ++A  L   + R     P V  Y  +I G CKE++
Sbjct: 174 VESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRG-GVSPGVFVYNVVIGGLCKEKR 232

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M  AE L + M ++ + PN  TY +LI G+CKVG  E A+++ + M  E   P I  +N+
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +++GLC+   ++EA  +L++        D+ TYT L   HLK      ++ L    V+ G
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +    +  + L+ A C++  M+++E+  ++ +  GL P    + +++ GY + G+I+ A 
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
              ++M  +G  P+++TY +L+   C+   ++EA +  + M+ KG+ P   T  TL   Y
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472

Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
            +         ILE ++KK     V     LI  LC +  +  A +    ++
Sbjct: 473 GRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMV 524


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 229/504 (45%), Gaps = 58/504 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V S  ++G L      +    N+ + +   T N V+   C+ GLV+    +  EM 
Sbjct: 132 VNVLVHSLCKVGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMV 189

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG+C D+ +  ++V  YCR+G V  A+  +  ++D G   D   L  LI  +C+ G   
Sbjct: 190 KRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGL-- 247

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV------------ 323
            + QA EL+E   R   K ++ T+  L+   CK G   +A  LF +++            
Sbjct: 248 -MSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306

Query: 324 ------RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
                    N +P + TYT +I+ YCK   +  +  L ++M   G++P+  T +S++YG 
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G    A  L   M + G  PN  +Y  II+ L K GRV EA+ L  +   R +  D 
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +T T ++    K  +TK+A  +F  ++K  L P+   Y+ L+  +C+  KM+ +E   Q+
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG------ 551
                + P   T++S+I GY + G +S AV   + M Q    P+ I Y  LI G      
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 552 ------LCKQSK-----------------------LDEACQFYESMIGKGISPCEVTRVT 582
                  CK+ K                       +DEA      M  KGI P  V   +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 583 LAYEYCKQGDSATAMIILESLDKK 606
           L   Y K+G+   A+ I++ + +K
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEK 630



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 227/492 (46%), Gaps = 37/492 (7%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++  + E G + +   ++     + + +   T N ++   C+ G +  AE +F+E+ 
Sbjct: 235 LNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294

Query: 216 A-------------------RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
                               + +     +Y  ++ AYC+   V E+      M+  G + 
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T + ++  FC     G + +A  L  EM   G  PN  ++  +I+ L K G   +AF
Sbjct: 355 DVVTCSSILYGFCR---HGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411

Query: 317 RLFLKLV-RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            L  ++V R  ++  ++ T T ++ G  K  K   AE + E + +  L PN  TY++L+ 
Sbjct: 412 NLQSQMVVRGISF--DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G+CK+G  E A  ++  M KE   PN+  +++II+G  KKG + +A ++L++  QR +  
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           + I Y IL+  + K  E   A   FC+ +K+  L      +  L+    R  +M E+   
Sbjct: 530 NTIVYAILIDGYFKAGEQDVA-DDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSL 588

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             +  + G+ P    Y S+I GY ++GN  +A+   Q M +     D + Y ALI GL +
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648

Query: 555 QSKLDE--ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
             K D    C     MI  G++P  +T  T+   YC +G +  A+ IL  + K   I   
Sbjct: 649 LGKYDPRYVCS---RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM-KSYGIMPN 704

Query: 611 --TVNTLIRKLC 620
             T N LI  LC
Sbjct: 705 AVTYNILIGGLC 716



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 62/450 (13%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNAT 260
           GLV   + ++ +M   GV  D  S  ++V + C++G   + D  L  + +   + +DN T
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVG---DLDLALGYLRNNDVVDIDNVT 164

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKG-------------------------W--- 292
              +I  FC KG    + Q F LL EMV++G                         W   
Sbjct: 165 YNTVIWGFCQKGL---VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMY 221

Query: 293 -------KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
                    +V     LIDG C+ G   +A  L     RSD  K ++ TY  ++  +CK 
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSD-VKIDIVTYNTLLKAFCKT 280

Query: 346 EKMNRAEMLL----------ERMKE---------QGLLPNTNTYTSLIYGHCKVGNFERA 386
             + RAE L           +R+K          + L P   TYT+LI  +CK    E +
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + L   M   G  P++   ++I+ G C+ G++ EA  L ++ ++  L  + ++Y  +++ 
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINS 400

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K     +A  L  +MV  G++ DI   TT++    +  K KE+E+ F+  +   L P 
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY++++ GY + G +  A    Q+M +    P+ IT+ ++I+G  K+  L +A     
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            M+ + + P  +    L   Y K G+   A
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVA 550



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 235/561 (41%), Gaps = 78/561 (13%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++S  + GR+ E F++  +M   G+     T   V+    ++G  + AEEVF+
Sbjct: 391 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +    +  +  +Y  ++  YC++G++  A+  L  M       +  T + +I  +  KG
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA----------------- 315
               + +A ++L EMV++   PN   + +LIDG  K G  + A                 
Sbjct: 511 M---LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 567

Query: 316 -FRLFLKLVR----------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            F + L  ++                S    P++  Y ++I GY KE     A  +++ M
Sbjct: 568 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627

Query: 359 KEQ----------------------------------GLLPNTNTYTSLIYGHCKVGNFE 384
           KE+                                  GL P+  TY ++I  +C  G  E
Sbjct: 628 KEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTE 687

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A D+++ M   G  PN   YN +I GLCK G V++A   L +    E     IT+  L+
Sbjct: 688 DALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLV 747

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
             + +  +  + L +  ++V +GL   +  Y TLI  FCR    ++++    E +  G+ 
Sbjct: 748 KAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGIS 807

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS----KLDE 560
               TY ++I GY    ++  A+K + +M   G AP+  TY  L+ GL         ++E
Sbjct: 808 ADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEE 867

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII-LESLDKKL--WIRTVNTLIR 617
             +    M  +G+ P   T   L   Y + G+    +I+ +E + K     ++T N LI 
Sbjct: 868 TEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLIS 927

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
                 ++  A    + LL K
Sbjct: 928 DYAKSGKMIEARELLNDLLTK 948



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 193/409 (47%), Gaps = 13/409 (3%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYA 207
            E ++ +   ++++   +GR+ E  S++I+M + G+ P I +  + + G   E G    A
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE-GNQLAA 620

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-SAMLDRGAILDNATLTLLIT 266
             +  EM  + +  D  +Y  ++    R+G+     R++ S M++ G   D  T   +I 
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP--RYVCSRMIELGLAPDCITYNTIIN 678

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C    +G  + A ++L EM   G  PN  T+ +LI GLCK G  EKA     +++  +
Sbjct: 679 TYC---IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            + P   T+  ++  Y + EK ++   + E++   GL  +   Y +LI   C++G   +A
Sbjct: 736 -FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 794

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL-- 444
             ++D M K G + ++  YNA+I G C    V++A +   + F   +  +  TY  LL  
Sbjct: 795 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 854

Query: 445 --SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
             +  L +   ++   L   M + GL P+   Y  L++ + R    K++     E IT G
Sbjct: 855 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 914

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             PT +TY  +I  Y + G +  A +    +   G  P++ TY  L  G
Sbjct: 915 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 176/350 (50%), Gaps = 22/350 (6%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + Q   +  +M+  G  P+V++  VL+  LCK G  + A      L  +D    +  T
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGY---LRNNDVVDIDNVT 164

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G+C++  +++   LL  M ++GL  ++ T   L+ G+C++G  + A  +M  + 
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G T ++   N +IDG C+ G + +A EL++ +++ +++ D +TY  LL    K  +  
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284

Query: 455 QALGLFCRMVK-------------------AGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           +A  LF  ++                      L P +  YTTLIAA+C+   ++ES   +
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++ I  G+ P   T +S++ G+ R G ++ A   F+ M ++G  P++++Y  +I+ L K 
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            ++ EA      M+ +GIS   VT  T+     K G +  A  + E++ K
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 200/495 (40%), Gaps = 79/495 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G+++    ++ +M    +P    T + ++    + G++  A +V  EM  R 
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y +++  Y + G    AD +   M  R     N    +L+         G + 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL---KRVGRMD 583

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+ +M  KG  P++  +  LIDG  K+G    A  +  ++ +  N + +V  Y A+
Sbjct: 584 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-KEKNIRFDVVAYNAL 642

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  +  K +    +  RM E GL P+  TY ++I  +C  G  E A D+++ M   G 
Sbjct: 643 IKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 399 TPNIYAYNAIIDGLCKKGRVQEA------------------YELLKKAFQRELQADKI-- 438
            PN   YN +I GLCK G V++A                  ++ L KA+ R  +ADKI  
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 439 ---------------TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
                           Y  L++   +   T++A  +   MVK G++ D+  Y  LI  +C
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 821

Query: 484 R----QKKMKESEKFFQEAITA-----------------------------------GLF 504
                +K +K   + F + I                                     GL 
Sbjct: 822 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 881

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY  ++ GY R GN    +     M   G  P   TY  LIS   K  K+ EA + 
Sbjct: 882 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 941

Query: 565 YESMIGKGISPCEVT 579
              ++ KG  P   T
Sbjct: 942 LNDLLTKGRIPNSFT 956



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 43/315 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM---- 214
           +++++   G+ ++   ++ EM + G+     T N ++G  C+ G VE AE   DEM    
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735

Query: 215 -------------------------------CARGVCADASSYKLMVVAYCRMGRVTEAD 243
                                           A G+    + Y  ++  +CR+G   +A 
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVL 302
             L  M+ RG   D  T   LI  +C     GS +++A +   +M   G  PN+ T+  L
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYC----TGSHVEKALKTYSQMFVDGIAPNITTYNTL 851

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYK---PNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           + GL   G  E+      KLV   N +   PN  TY  ++SGY +     +  +L   M 
Sbjct: 852 LGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMI 911

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G +P   TY  LI  + K G    A +L++ +  +G  PN + Y+ +  G        
Sbjct: 912 TKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEP 971

Query: 420 EAYELLKKAFQRELQ 434
           E    LK++++ E++
Sbjct: 972 EIDRSLKRSYEIEVK 986



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 29/368 (7%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  +  +I  Y   ++ + A      M+  GL+P    + +L+Y     G   +   +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  P++++ N ++  LCK G +  A   L+      +  D +TY  ++    ++ 
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKG 176

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              Q  GL   MVK GL  D      L+  +CR   ++ +E      +  G+        
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG- 570
           ++I GY   G +S A +  +   +     D +TY  L+   CK   L  A   +  ++G 
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 571 ------------------KGISPCEVTRVTLAYEYCK-----QGDSATAMIILESLDKKL 607
                             K + P  VT  TL   YCK     +  S    +I+  +    
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD- 355

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY-ALFSDL 666
            + T ++++   C   ++  AA+ F ++     + + VS A + N+ ++S +    F+  
Sbjct: 356 -VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 667 SQRIAEGI 674
           SQ +  GI
Sbjct: 415 SQMVVRGI 422


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 226/490 (46%), Gaps = 48/490 (9%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G    A  V     A G   D  +Y  +V  YCR GR+  A R +++M       D 
Sbjct: 85  CRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDA 141

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T T +I   CD   RG +  A  LL++M+++G +P+V T+TVL++ +CK     +A  +
Sbjct: 142 YTYTPIIRGLCD---RGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 198

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG-- 376
            L  +R+    PN+ TY  +I+G C+E +++ A+ +L R+   G  P+  +YT+++ G  
Sbjct: 199 -LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 257

Query: 377 ---------------------------------HCKVGNFERAYDLMDLMGKEGCTPNIY 403
                                             C+ G  ERA  ++  M + GCTPN  
Sbjct: 258 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 317

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
             N +I+ +CK+GRV +AY+ L          D I+YT +L    +    + A  L   M
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 377

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V+    P+   + T I   C++  ++++ K  +     G      TY +++ G+   G +
Sbjct: 378 VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 437

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            SA++ F   N + C P+ ITY  L++GLC   +LD A +    MI K      VT   L
Sbjct: 438 DSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVL 494

Query: 584 AYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              +C++G    AM ++  + +      + T NTL+  +  +     A    H L+ K  
Sbjct: 495 VSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGV 554

Query: 641 NVDRVSLAAL 650
           ++D ++ +++
Sbjct: 555 SLDTITYSSV 564



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 177/396 (44%), Gaps = 34/396 (8%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-------------- 319
           R  + +A  L+E    +G  P+VY  T LI  LC++G T  A R+               
Sbjct: 52  RDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFA 111

Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                             +L+ S    P+ +TYT +I G C   ++  A  LL+ M ++G
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TYT L+   CK   F  A +++D M  +GCTPNI  YN II+G+C++GRV +A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           E+L +      Q D ++YT +L              LF  MV     P+   +  L+  F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           CR   ++ + +  Q+    G  P       +I    + G +  A  +   M   GC PD 
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           I+Y  ++ GLC+  + + A +    M+ K   P EVT  T     C++G    A+ ++E 
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411

Query: 603 LDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + +    + I T N L+   C + RV  A   F+ L
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL 447



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 220/480 (45%), Gaps = 13/480 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+ +   GRL     ++  M    +P    T   ++   C+ G V  A  + D+M  RG
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y +++ A C+     EA   L  M  +G   +  T  ++I   C +   G + 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE---GRVD 228

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+L  +   G++P++ ++T ++ GLC     +    LF ++V      PN  T+  +
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV-DKKCVPNEVTFDML 287

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +C+   + RA  +L++M + G  PNT     +I   CK G  + AYD ++ MG  GC
Sbjct: 288 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 347

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  +Y  ++ GLC+ GR + A ELL +  ++    +++T+   +    ++   +QA+ 
Sbjct: 348 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 407

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M + G +  I  Y  L+  FC Q ++  + + F         P   TYT+++ G  
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLC 464

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               + +A +    M Q  C  + +T+  L+S  C++  ++EA +    M+  G +P  +
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 524

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  TL     K  +S  A+ +L  L  K   L   T ++++  L  E R   A    H +
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 201/435 (46%), Gaps = 7/435 (1%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           +RG   D      ++   CR GR ++A R L      GA +D      L+  +C  G   
Sbjct: 67  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYG--- 123

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  A  L+  M      P+ YT+T +I GLC +G    A  L   +++    +P+V TY
Sbjct: 124 RLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR-GCQPSVVTY 179

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T ++   CK      A  +L+ M+ +G  PN  TY  +I G C+ G  + A ++++ +  
Sbjct: 180 TVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 239

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P+I +Y  ++ GLC   R  +   L  +   ++   +++T+ +L+    +    ++
Sbjct: 240 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ +  +M + G  P+      +I A C+Q ++ ++  F       G  P   +YT+++ 
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 359

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R G    A +    M +  C P+ +T+   I  LC++  +++A +  E M   G S 
Sbjct: 360 GLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSV 419

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             VT   L + +C QG   +A+ +  +L  +    T  TL+  LC  +R+  AA     +
Sbjct: 420 GIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGM 479

Query: 636 LGKDQNVDRVSLAAL 650
           + KD  ++ V+   L
Sbjct: 480 IQKDCPLNAVTFNVL 494



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 7/368 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F   G ++    ++ +M+ +G    T+  N V+   C+ G V+ A +  + M   G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++   CR GR   A   L  M+ +    +  T    I   C KG    I+
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL---IE 403

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L+E M   G    + T+  L+ G C +G  + A  LF  L      +PN  TYT +
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTL 459

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C  E+++ A  LL  M ++    N  T+  L+   C+ G  E A +L++ M + GC
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  +N ++DG+ K    +EA ELL     + +  D ITY+ ++    ++  T++A+ 
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 579

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   +   G+ P +  Y  ++ A C++ +  ++  FF   ++ G  P + TY  +I G  
Sbjct: 580 MLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLA 639

Query: 519 RDGNISSA 526
            +G +  A
Sbjct: 640 HEGLLKEA 647



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 36/468 (7%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  +++ EM   G      T N ++   C  G V+ A+E+ + + + G   D  SY  ++
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C   R  +     + M+D+  + +  T  +L+  FC  G    +++A ++L++M + 
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM---VERAIQVLQQMSQH 310

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PN     ++I+ +CK+G  + A+  FL  +      P+  +YT ++ G C+  +   
Sbjct: 311 GCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ LL  M  +   PN  T+ + I   C+ G  E+A  L++LM + GC+  I  YNA++ 
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 429

Query: 411 GLCKKGRVQEAYEL--------------------------------LKKAFQRELQADKI 438
           G C +GRV  A EL                                L    Q++   + +
Sbjct: 430 GFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAV 489

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+ +L+S   ++   ++A+ L  +M++ G  P++  + TL+    +    +E+ +     
Sbjct: 490 TFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGL 549

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           ++ G+     TY+S++    R+     A++    +  +G  P    Y  ++  LCK+ + 
Sbjct: 550 VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCET 609

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           D+A  F+  M+  G  P E T + L      +G    A  +L  L  K
Sbjct: 610 DQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + +V   C  G+VE A +V  +M   G   + +   +++ A C+ GRV +A  +L+ M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C  G     + A ELL EMVRK   PN  T    I  LC+K
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAG---RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 399

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A +L ++L+        + TY A++ G+C + +++ A  L   +  +   PNT T
Sbjct: 400 GLIEQAIKL-IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTIT 455

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M ++ C  N   +N ++   C+KG V+EA EL+ +  
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + IT+  LL    K   +++AL L   +V  G++ D   Y++++    R+ + +
Sbjct: 516 EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTE 575

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ +        G+ P    Y  ++    +      A+ +F  M   GC P+  TY  LI
Sbjct: 576 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L EA      +  KG+
Sbjct: 636 EGLAHEGLLKEARYVLSELYAKGV 659



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 213/474 (44%), Gaps = 42/474 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + GR+ +  +++ +M   G      T   ++   C+      A  V DEM A+G
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206

Query: 219 VCADASSYKLMVVAYCRMGRVTEAD-----------------------------RW---- 245
              +  +Y +++   CR GRV +A                              RW    
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266

Query: 246 --LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
              + M+D+  + +  T  +L+  FC  G    +++A ++L++M + G  PN     ++I
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGM---VERAIQVLQQMSQHGCTPNTTLCNIVI 323

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           + +CK+G  + A+  FL  +      P+  +YT ++ G C+  +   A+ LL  M  +  
Sbjct: 324 NAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 382

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN  T+ + I   C+ G  E+A  L++LM + GC+  I  YNA++ G C +GRV  A E
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L         + + ITYT LL+          A  L   M++     +   +  L++ FC
Sbjct: 443 LFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFC 499

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           ++  ++E+ +   + +  G  P   T+ +++ G  +D N   A++    +   G + D I
Sbjct: 500 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 559

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           TY +++  L ++ + +EA Q   ++   G+ P       + +  CK+ ++  A+
Sbjct: 560 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 6/304 (1%)

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + +  A  L+E    +G  P+    T LI   C+ G    A  ++      G   +++AY
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ G C+ GR+  A  L+       +  D  TYT ++     +     AL L   M++
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P +  YT L+ A C+     E+     E    G  P   TY  +I G  R+G +  
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +   R++  G  PD ++Y  ++ GLC   + D+    +  M+ K   P EVT   L  
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 289

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +C+ G    A+ +L+ + +          N +I  +C + RV  A  F + +     N 
Sbjct: 290 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349

Query: 643 DRVS 646
           D +S
Sbjct: 350 DTIS 353



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 9/267 (3%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           EQAI ++  +     S+  +++     GF      ++  +  A  L +N   E       
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFC-----VQGRVDSALELFNNLPCEPNTITYT 457

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            +++      RL     ++  M     PL   T N +V   C+ G VE A E+ ++M   
Sbjct: 458 TLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 517

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   +  ++  ++    +     EA   L  ++ +G  LD  T + ++     +      
Sbjct: 518 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED---RT 574

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A ++L  +   G +P V  +  ++  LCK+  T++A   F  +V S+   PN  TY  
Sbjct: 575 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV-SNGCMPNESTYII 633

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I G   E  +  A  +L  +  +G+L
Sbjct: 634 LIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 3/144 (2%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           RD +++ A +  +  +  G APD      LI  LC++ +  +A +   +    G +P +V
Sbjct: 52  RD-DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASG-APVDV 109

Query: 579 -TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
               TL   YC+ G    A  ++ S+       T   +IR LC   RVG A      +L 
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 638 KDQNVDRVSLAALKNACYESNKYA 661
           +      V+   L  A  +S+ + 
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFG 193


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 4/425 (0%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EMT+ G+          +   C    +E AE++F+ M   GV  +  +Y  M+  YC+ G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            V +A      +L    + +      L+  FC       +  A  L   MV+ G  PN+Y
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR---ELVTARSLFVHMVKFGVDPNLY 340

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            +  LI G CK G   +A  L L  + S N  P+V TYT +I+G C E+++  A  L ++
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGL-LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           MK + + P++ TY SLI+G+CK  N E+A DL   M   G  PNI  ++ +IDG C    
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++ A  L  +   + +  D +TYT L+  H K+A  K+AL L+  M++AG++P+ H +  
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+  F ++ ++  +  F+QE            +T +I G  ++G I  A ++F  M   G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD  +Y +++ G  ++ ++ +       MI  GI P  +    LA  Y   G   +A 
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639

Query: 598 IILES 602
            +  S
Sbjct: 640 FLTNS 644



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 191/374 (51%), Gaps = 4/374 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           GL    E++ DEM + G+  +   Y + ++  CR  ++ EA++    M   G + +  T 
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           + +I  +C  G   +++QA+ L +E++     PNV     L+DG CK      A  LF+ 
Sbjct: 273 SAMIDGYCKTG---NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +V+     PN++ Y  +I G+CK   M  A  LL  M+   L P+  TYT LI G C   
Sbjct: 330 MVKF-GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
               A  L   M  E   P+   YN++I G CK+  +++A +L  +     ++ + IT++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  +    + K A+GL+  M   G+ PD+  YT LI A  ++  MKE+ + + + + A
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   T+  ++ G+ ++G +S A+ ++Q  NQ     +++ +  LI GLC+   +  A
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568

Query: 562 CQFYESMIGKGISP 575
            +F+  M   GI+P
Sbjct: 569 SRFFSDMRSCGITP 582



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 214/440 (48%), Gaps = 12/440 (2%)

Query: 200 ELGLVEYAEEVFDEM-CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           E+GL E A  V  EM C+     D+ +   ++    R  R          M+ RG + D 
Sbjct: 144 EMGLFEEALWVSREMKCS----PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPD- 198

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             +  ++   C K  +G   +  +LL+EM   G KPNVY +T+ I  LC+    E+A ++
Sbjct: 199 VHIYFVLFQCCFK--QGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +L++     PN++TY+AMI GYCK   + +A  L + +    LLPN   + +L+ G C
Sbjct: 257 F-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      A  L   M K G  PN+Y YN +I G CK G + EA  LL +     L  D  
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL++    + +  +A  LF +M    + P    Y +LI  +C++  M+++     E 
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
             +G+ P   T++++I GY    +I +A+  +  M   G  PD +TY ALI    K++ +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--LWIRTVNT-L 615
            EA + Y  M+  GI P + T   L   + K+G  + A+   +  +++   W     T L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555

Query: 616 IRKLCSEKRVGMAALFFHKL 635
           I  LC    +  A+ FF  +
Sbjct: 556 IEGLCQNGYILRASRFFSDM 575



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 7/372 (1%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           + L+++ +  MG   EA  W+S  +      D+     ++     +    S+   ++L  
Sbjct: 135 FSLLIMEFLEMGLFEEA-LWVSREMKCSP--DSKACLSILNGLVRRRRFDSVWVDYQL-- 189

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+ +G  P+V+ + VL     K+G   K  +L L  + S   KPNV+ YT  I   C++
Sbjct: 190 -MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL-LDEMTSLGIKPNVYIYTIYILDLCRD 247

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            KM  AE + E MK+ G+LPN  TY+++I G+CK GN  +AY L   +      PN+  +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             ++DG CK   +  A  L     +  +  +   Y  L+  H K     +A+GL   M  
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             L+PD+  YT LI   C + ++ E+ + FQ+     +FP+  TY S+I GY ++ N+  
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+     M   G  P+ IT+  LI G C    +  A   Y  M  KGI P  VT   L  
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487

Query: 586 EYCKQGDSATAM 597
            + K+ +   A+
Sbjct: 488 AHFKEANMKEAL 499



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 166/368 (45%), Gaps = 4/368 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + G +++ + +  E+    L         +V   C+   +  A  +F  M   G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +   Y  ++  +C+ G + EA   LS M       D  T T+LI   C       + 
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC---IEDQVA 391

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L ++M  +   P+  T+  LI G CK+   E+A  L  ++  S   +PN+ T++ +
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTL 450

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC    +  A  L   M  +G++P+  TYT+LI  H K  N + A  L   M + G 
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + +  ++DG  K+GR+  A +  ++  Q+    + + +T L+    +     +A  
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M   G+ PDI +Y +++    ++K++ ++     + I  G+ P       +   Y 
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQ 630

Query: 519 RDGNISSA 526
            +G + SA
Sbjct: 631 ANGYVKSA 638



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 29/349 (8%)

Query: 313 EKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRA----EMLLERMKEQGLLPNT 367
           E+AF+LF    RS   K N + +++A+I       K   A    + L+ER+K      N 
Sbjct: 55  EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114

Query: 368 N------------------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +                   ++ LI    ++G FE A  +   M    C+P+  A  +I+
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSIL 171

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           +GL ++ R    +   +    R L  D   Y +L     KQ    +   L   M   G+ 
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+++ YT  I   CR  KM+E+EK F+     G+ P   TY++MI GY + GN+  A   
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           ++ +      P+ + +G L+ G CK  +L  A   +  M+  G+ P       L + +CK
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351

Query: 590 QGDSATAMIIL---ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            G+   A+ +L   ESL+    + T   LI  LC E +V  A   F K+
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 233/497 (46%), Gaps = 36/497 (7%)

Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
           VA +FF WA     F+H      V   + +     E AH +++       E+  L     
Sbjct: 58  VAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLK------EELEPLCFPNE 111

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           ++     NG               C+ G V+ A E+ DEM  RGV  D   +  ++   C
Sbjct: 112 IMYTTVINGF--------------CKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLC 157

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK---- 290
           R GR+ EA     +M +  +  +  T   ++   C       I +A EL ++M ++    
Sbjct: 158 RKGRIDEALEQFKSMGEECSP-NVITYNTVVNGLCKAN---RIDEALELFDDMEKRYEAS 213

Query: 291 -GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G +P+V +++ +ID LCK    +KA+  F K +R+    PNV TY+++I G CK ++ +
Sbjct: 214 HGCEPDVISYSTVIDALCKAQRVDKAYEYF-KRMRAVGCAPNVVTYSSLIDGLCKVDRPS 272

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
               LL  MKE+G   N   + ++++   K    E+A    + + K G  PN+  YN  +
Sbjct: 273 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 332

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GLCK GRV EAY +L +  + ++  D ITY+ ++    K     +A  +F RM+     
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM---ICGYLRDGNISSA 526
           P    + TL+  F   KK +E+ +  ++ + AG  P  +TY  +   +CG     ++ SA
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGA---DSVESA 449

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ + +M +    PD  TY  LI  LC+  ++DEA +F + M    + P       L   
Sbjct: 450 LEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 509

Query: 587 YCKQGDSATAMIILESL 603
            CKQG+   A  +L+++
Sbjct: 510 LCKQGEVDEACSVLDNV 526



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 204/419 (48%), Gaps = 13/419 (3%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +A +  +++ A+ +  R  EA R L   L+     +    T +I  FC  G    + QAF
Sbjct: 75  NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAG---QVDQAF 131

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ELL+EM  +G K +V  H+ LI GLC+KG  ++A   F  +   +   PNV TY  +++G
Sbjct: 132 ELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM--GEECSPNVITYNTVVNG 189

Query: 342 YCKEEKMNRAEMLLERMKEQ-----GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            CK  +++ A  L + M+++     G  P+  +Y+++I   CK    ++AY+    M   
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC PN+  Y+++IDGLCK  R  E  ELL    ++    + I +  +L    K  E ++A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
              F R++K+G  P++  Y   +   C+  ++ E+ +   E + + + P   TY+S+I G
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + + G +  A   F RM    C P  +T+  L+ G  +  K  EA + +E M+  G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFF 632
             T   L    C      +A+ I   + +K      NT   LI+ LC  +RV  A  F 
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFL 488



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 209/460 (45%), Gaps = 24/460 (5%)

Query: 129 FRHFMRLYIV-CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           + +F R+  V CA ++++  +          ++    ++ R  E   +++ M   G  + 
Sbjct: 240 YEYFKRMRAVGCAPNVVTYSS----------LIDGLCKVDRPSECLELLLHMKEKGFGIN 289

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
               N ++    +    E A + F+ +   G   +  +Y + V   C+ GRV EA R L 
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M++     D  T + +I  FC  G    + +A ++   M+     P+  T   L+ G  
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAG---RMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 406

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           +   + +AFR+   +V +  + P + TY  ++   C  + +  A  +  +MK +   P+ 
Sbjct: 407 EHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           NTY  LI   C+    + A + +D+M  +   PN    +A+++ LCK+G V EA  +L  
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +   Q    T+ IL+ E   + + + A  L   +   G   D   Y+  +A  C+  K
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGK 582

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMI---CGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             E+ +  ++ +  G+ P + TY +++   CG  R   + SA+  F++M   GCAP  +T
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDR---VESAIAEFEKMASRGCAPGLVT 639

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           Y  LI   C     DEA + +E+M+  G +P   T  TL+
Sbjct: 640 YTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLS 679



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N  V   C+ G V+ A  +  EM    V  D  +Y  ++  +C+ GR+ +AD   + M
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 386

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +    I    T   L+  F +       ++AF + E+MV  G+ P + T+ VL+D +C  
Sbjct: 387 MVHECIPHPVTFMTLLHGFSE---HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGA 443

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              E A  ++ K+ R    +P+ +TY  +I   C+  +++ A+  L+ M+   ++PN   
Sbjct: 444 DSVESALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 502

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             +L+   CK G  + A  ++D + + GC P    +  +++ L  + + + A +LL+   
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSP- 561

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
                AD  TY++ ++E  K  +  +A+ +  +MV  G+ PD   Y  ++ + C   +++
Sbjct: 562 --GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVE 619

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   F++  + G  P   TYT +I           A + F+ M   G  P   T   L 
Sbjct: 620 SAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLS 679

Query: 550 SGL 552
           S L
Sbjct: 680 SCL 682



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 57/143 (39%)

Query: 132 FMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           ++R     A+ L+ +  F          V+   + G+  E   ++ +M   G+     T 
Sbjct: 546 YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTY 605

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
             V+   C L  VE A   F++M +RG      +Y L++   C      EA R   AM+ 
Sbjct: 606 VAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVA 665

Query: 252 RGAILDNATLTLLITAFCDKGFR 274
            G      T+  L +   D G++
Sbjct: 666 AGFTPQAQTMRTLSSCLRDAGYQ 688


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 245/553 (44%), Gaps = 45/553 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPL-ITSTLNRVVGIACELGLVEYAEEV-FDEMCA 216
           ++  F  +GRLK GF+    +   G  +  T   ++++   C+   V+ A ++    M  
Sbjct: 98  LIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPE 157

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA---ILDNATLTLLITAFC---- 269
            G   D  SY +++  +C   R  EA   LS M D G      +  T T +I   C    
Sbjct: 158 FGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQM 217

Query: 270 ------------DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTV 301
                       DKG R                G  K+  ++L+EM   G +P+ Y + V
Sbjct: 218 VDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAV 277

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+D LCK G   +A  +F  ++R    KPNV  Y  ++ GY  E  ++     L+ M   
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRK-GIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN 336

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G+ P+ + +  +   + K    + A  + D M ++  +PNI  Y A+ID LCK GRV +A
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDA 396

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                +     +  D   ++ L+       + ++A  LF  ++  G+  D   + TL+  
Sbjct: 397 VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            CR+ ++ E+++     +  G+ P   +Y +++ G+   G I  A K    +  IG  PD
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  L+ G CK  ++D+A   +  M+ KG++P  VT  T+ +   + G  + A  +  
Sbjct: 517 KVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576

Query: 602 SL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD----RVSLAALKNAC 654
           S+     ++ I T N +I  LC    V  A   FH L  KD  +D     + + AL    
Sbjct: 577 SMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGG 636

Query: 655 YESNKYALFSDLS 667
            + +   LF+ +S
Sbjct: 637 RKEDAMDLFATIS 649



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 225/492 (45%), Gaps = 21/492 (4%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  +  IG+ KE   M+ EM+ +GL         ++   C+ G    A  +FD +  +
Sbjct: 242 CLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRK 301

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  + + Y +++  Y   G ++E   +L  M+  G   D+    ++  A+  K     I
Sbjct: 302 GIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAM---I 358

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  + ++M ++   PN+ T+  LID LCK G  + A   F +++  +   P++  +++
Sbjct: 359 DEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI-DEGMTPDIFVFSS 417

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C  +K  +AE L   + +QG+  +T  + +L+   C+ G    A  L+DLM + G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++ +YN ++DG C  GR+ EA +LL       L+ DK+TY  LL  + K      A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M+  GL PD+  Y T++    +  +  E+++ +   I +       TY  +I G 
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++  +  A K F  +       D  T   +I  L K  + ++A   + ++   G+ P  
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI----------RTVNTLIRKLCSEKRVGM 627
            T   +A    K+G        LE LD+              R +N L+R L     +  
Sbjct: 658 ETYCLIAENLIKEGS-------LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINR 710

Query: 628 AALFFHKLLGKD 639
           A  +  KL  K+
Sbjct: 711 AGAYLSKLDEKN 722



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 230/478 (48%), Gaps = 21/478 (4%)

Query: 205 EYAEEVFDEM---CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG-AILDNAT 260
           E    +F+ M   C+  V   + +Y +++  +CRMGR+         +L  G  + D   
Sbjct: 71  ELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI 130

Query: 261 LTLLITAFCDKGFRGSIKQAFE-LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
            + L+   CD      + +A + LL  M   G  P+V+++++L+ G C +   E+A  L 
Sbjct: 131 FSQLLKGLCDAK---RVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALEL- 186

Query: 320 LKLVRSD---NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           L ++  D   ++ PNV TYT +I G CK + ++RA+ + + M ++G+ PN +TYT LI+G
Sbjct: 187 LSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +  +G ++    ++  M   G  P+ Y Y  ++D LCK GR  EA  +     ++ ++ +
Sbjct: 247 YLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
              Y ILL  +  +    +       MV  G++PD H +  +  A+ ++  + E+   F 
Sbjct: 307 VTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +     L P   TY ++I    + G +  AV  F +M   G  PD   + +L+ GLC   
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TV 612
           K ++A + +  ++ +GI    V   TL    C++G    A  +++ L  ++ +R    + 
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLID-LMLRVGVRPDVISY 485

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSDL 666
           NTL+   C   R+  AA     ++      D+V+   L +   ++ +    Y+LF ++
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 147/330 (44%), Gaps = 4/330 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V     + + ++   +  E+ + G+ L T   N ++   C  G V  A+ + D M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLM 473

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  D  SY  +V  +C  GR+ EA + L  ++  G   D  T   L+  +C K  R
Sbjct: 474 LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC-KARR 532

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A+ L  EM+ KG  P+V T+  ++ GL + G   +A  L+L ++ S   + N++T
Sbjct: 533 --IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT-QMNIYT 589

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+G CK   ++ A  +   +  + L  +  T   +I    K G  E A DL   + 
Sbjct: 590 YNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATIS 649

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  P++  Y  I + L K+G ++E  EL     +     +      L+   L + +  
Sbjct: 650 AYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIN 709

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           +A     ++ +   + +    + LI+ + R
Sbjct: 710 RAGAYLSKLDEKNFSLEASTTSMLISIYSR 739


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 228/477 (47%), Gaps = 4/477 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+ A++ + +   S+  +M   G+     T +  +   C    +  A  V  +M   G
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +   ++  YC   R+++A   +  M++ G   D  T T LI             
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF---LHNKAS 205

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L+++MV++G +P++ T+  +++GLCK+G  + A  L  K+  +   K NV  +  +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTI 264

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK   +  A  L   M+ +G+ PN  TY SLI   C  G +  A  L+  M ++  
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  +NA+ID   K+G++ EA +L ++  QR +  D ITY +L++         +A  
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  MV     P+I  Y TLI  FC+ K++++  + F+E    GL     TYT++I G+ 
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+  SA   F++M       D +TY  L+ GLC   KLD A   ++ +    +     
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
              T+    CK G    A  +  SL  K  + T NT+I  LCS++ +  A   F K+
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 7/448 (1%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N+++    ++   E    + ++M   G+  D  +Y + +  +CR  +++ A   L+ M+
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   D  TL+ L+  +C       I  A  L+++MV  G+KP+ +T T LI GL    
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSK---RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
              +A  L  ++V+    +P++ TY  +++G CK   ++ A  LL +M+   +  N   +
Sbjct: 203 KASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            ++I   CK  + E A DL   M  +G  PN+  YN++I+ LC  GR  +A  LL    +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +++  + +T+  L+    K+ +  +A  L   M++  ++PD   Y  LI  FC   ++ E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +++ F+  ++    P  +TY ++I G+ +   +   V+ F+ M+Q G   + +TY  +I 
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KL 607
           G  +    D A   ++ M+   +    +T   L +  C  G   TA++I + L K   +L
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            I   NT+I  +C   +VG A   F  L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL 529



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 192/371 (51%), Gaps = 8/371 (2%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++   C+   VE A ++F EM  +G+  +  +Y  ++   C  GR ++A R LS ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           ++    +  T   LI AF  +G    + +A +L EEM+++   P+  T+ +LI+G C   
Sbjct: 321 EKKINPNVVTFNALIDAFFKEG---KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             ++A ++F K + S +  PN+ TY  +I+G+CK +++     L   M ++GL+ NT TY
Sbjct: 378 RLDEAKQMF-KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           T++I G  + G+ + A  +   M       +I  Y+ ++ GLC  G++  A  + K   +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            E++ +   Y  ++    K  +  +A  LFC +    + PD+  Y T+I+  C ++ ++E
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQE 553

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           ++  F++    G  P   TY ++I   LRD + +++ +  + M   G   D  T  +L++
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVT 612

Query: 551 GLCKQSKLDEA 561
            +    +LD++
Sbjct: 613 NMLHDGRLDKS 623



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 205/460 (44%), Gaps = 7/460 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ +    R+ +  ++V +M   G    T T   ++           A  + D+M 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG   D  +Y  +V   C+ G +  A   L+ M       +      +I + C   +R 
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK--YR- 272

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A +L  EM  KG +PNV T+  LI+ LC  G    A RL   ++      PNV T+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTF 331

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+I  + KE K+  AE L E M ++ + P+T TY  LI G C     + A  +   M  
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           + C PNI  YN +I+G CK  RV++  EL ++  QR L  + +TYT ++    +  +   
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +F +MV   +  DI  Y+ L+   C   K+  +   F+    + +      Y +MI 
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  + G +  A   F     +   PD +TY  +ISGLC +  L EA   +  M   G  P
Sbjct: 512 GMCKAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
              T  TL     +  D A +  +++ +    ++   +T+
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI 608



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 206/435 (47%), Gaps = 7/435 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A ++F +M           +  ++ A  +M +          M   G   D  T ++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            I  FC    R  +  A  +L +M++ G++P++ T + L++G C       A  L  ++V
Sbjct: 124 FINCFCR---RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
               YKP+  T+T +I G     K + A  L+++M ++G  P+  TY +++ G CK G+ 
Sbjct: 181 EM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + A +L++ M       N+  +N IID LCK   V+ A +L  +   + ++ + +TY  L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++          A  L   M++  +NP++  +  LI AF ++ K+ E+EK  +E I   +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY  +I G+     +  A + F+ M    C P+  TY  LI+G CK  ++++  +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
            +  M  +G+    VT  T+   + + GD  +A ++ + +        I T + L+  LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479

Query: 621 SEKRVGMAALFFHKL 635
           S  ++  A + F  L
Sbjct: 480 SYGKLDTALVIFKYL 494



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 3/310 (0%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K++ A  L   M +    P+   +  L+    K+  FE    L + M   G + ++Y Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
             I+  C++ ++  A  +L K  +   + D +T + LL+ +        A+ L  +MV+ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G  PD   +TTLI       K  E+     + +  G  P   TY +++ G  + G+I  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +    +M       + + +  +I  LCK   ++ A   +  M  KGI P  VT  +L   
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 587 YCKQGDSATAMIILES-LDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
            C  G  + A  +L + L+KK+   + T N LI     E ++  A     +++ +  + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 644 RVSLAALKNA 653
            ++   L N 
Sbjct: 363 TITYNLLING 372



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 10/265 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++ F    RL E   M   M + + LP I  T N ++   C+   VE   E+F EM  R
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNI-QTYNTLINGFCKCKRVEDGVELFREMSQR 427

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +  +Y  ++  + + G    A      M+      D  T ++L+   C     G +
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS---YGKL 484

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  + + + +   + N++ +  +I+G+CK G   +A+ LF  L    + KP+V TY  
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNT 540

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MISG C +  +  A+ L  +MKE G LPN+ TY +LI  + +  +   + +L+  M   G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAY 422
              +     +++  +   GR+ +++
Sbjct: 601 FVGDASTI-SLVTNMLHDGRLDKSF 624



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 8/259 (3%)

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +V +A +L     +       + +  LLS   K  + +  + L  +M   G++ D++ Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
             I  FCR+ ++  +     + +  G  P   T +S++ GY     IS AV    +M ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD  T+  LI GL   +K  EA    + M+ +G  P  VT  T+    CK+GD   A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 597 MIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           + +L  ++    K  +   NT+I  LC  + V +A   F ++  K    + V+  +L N 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 654 -CYESNKYALFSDLSQRIA 671
            C     Y  +SD S+ ++
Sbjct: 303 LC----NYGRWSDASRLLS 317


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 235/502 (46%), Gaps = 32/502 (6%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++ F + G  +    ++ EM   GL +     N V+    + GLV  A E+   
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D ++Y +M+   C+ GR+ EAD  L    +RG + +  + T L+ A+C KG 
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKG- 394

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +A  +L  +   G K ++ ++   I G+   G  + A  +  K++    + P+  
Sbjct: 395 --DYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVF-PDAQ 451

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK+ ++   ++LL  M ++ + P+   + +LI G  + G  + A  +  ++
Sbjct: 452 IYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVI 511

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P I  YNA+I G CK G++ +A   L +        D+ TY+ ++  ++KQ + 
Sbjct: 512 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDM 571

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL +F +M+K    P++  YT+LI  FC++  M  +EK F    +  L P   TYT++
Sbjct: 572 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTL 631

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G+ + G    A   F+ M   GC P++ T+  LI+GL   +                 
Sbjct: 632 VGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTA----------------T 675

Query: 574 SPCEVTRVTLAYEYCKQGDSAT-----AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           SP     V +  +  K+ + +       M++L+  D+   I   N++I  LC    V  A
Sbjct: 676 SP-----VLIEEKDSKENERSLILDFFTMMLLDGWDQ--VIAAYNSVIVCLCKHGTVDTA 728

Query: 629 ALFFHKLLGKDQNVDRVSLAAL 650
            L   K+L K   +D V   AL
Sbjct: 729 QLLLTKMLTKGFLIDSVCFTAL 750



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 273/636 (42%), Gaps = 122/636 (19%)

Query: 81  SSPPRLN------LQIDIDSLTHE----------QAITVVASLANEAGSMV-----ALSF 119
           S PPR+N      +QI   S TH+          ++  VV+ +A+     V      L F
Sbjct: 21  SLPPRINHLVSDVIQILRTSKTHQWQDPLESRFAESKVVVSDVAHFVIDRVHDAELGLKF 80

Query: 120 FYWAIG------------------FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
           F WA                     A +R F  + +V     +   + +   E    ++ 
Sbjct: 81  FDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLEN--MKAQHLKPTREAFSALIL 138

Query: 162 SFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC--- 215
           ++AE G L      F  V EM +N  P   ++ N ++    + G V+ A +++D+M    
Sbjct: 139 AYAESGSLDRALQLFHTVREM-HNCFPTFVAS-NLLLNGLVKSGKVDVALQLYDKMLQTD 196

Query: 216 -ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D  +  +MV   C +G++ E  R +     +  +       ++I  +C KG  
Sbjct: 197 DGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKG-- 254

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL------------ 322
             ++ A   L E+  KG  P V T+  LI+G CK G  E   +L  ++            
Sbjct: 255 -DLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVF 313

Query: 323 --VRSDNYK--------------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
             V    YK                    P++ TY  MI+  CK  ++  A+ LLE+ KE
Sbjct: 314 NNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKE 373

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLM----------DL------------------ 392
           +GLLPN  +YT L++ +CK G++ +A  ++          DL                  
Sbjct: 374 RGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDV 433

Query: 393 -------MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
                  M ++G  P+   YN ++ GLCKKGR+     LL +   R +Q D   +  L+ 
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLID 493

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
             ++  E  +A+ +F  +++ G++P I  Y  +I  FC+  KM ++     E  +    P
Sbjct: 494 GFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAP 553

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
            + TY+++I GY++  ++SSA+K F +M +    P+ ITY +LI+G CK++ +  A + +
Sbjct: 554 DEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 613

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             M    + P  VT  TL   + K G    A  I E
Sbjct: 614 SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFE 649



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 6/348 (1%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A+ + G      Q F  + EM      P      +L++GL K G  + A +L+ K++
Sbjct: 136 LILAYAESGSLDRALQLFHTVREM--HNCFPTFVASNLLLNGLVKSGKVDVALQLYDKML 193

Query: 324 RSDNYKPNV---HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++D+    V   +T + M+ G C   K+     L++    +  +P+   Y  +I G+CK 
Sbjct: 194 QTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKK 253

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G+ + A   ++ +  +G  P +  Y A+I+G CK G  +   +LL +   R L  +   +
Sbjct: 254 GDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVF 313

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             ++    K     +A  +  RM + G  PDI  Y  +I   C+  +++E+++  ++A  
Sbjct: 314 NNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKE 373

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL P K +YT ++  Y + G+   A     R+ +IG   D ++YGA I G+    ++D 
Sbjct: 374 RGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDV 433

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL 607
           A    E M+ KG+ P       L    CK+G   A  +++ E LD+ +
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNV 481



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 155/364 (42%), Gaps = 56/364 (15%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++  G F  A ++   ++S   + GR+     ++ EM +  +         ++      G
Sbjct: 441 MMEKGVFPDA-QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNG 499

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A ++F  +  +GV      Y  M+  +C+ G++T+A   L+ M       D  T +
Sbjct: 500 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYS 559

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I  +     +  +  A ++  +M++  +KPNV T+T LI+G CKK    +A ++F  +
Sbjct: 560 TVIDGYVK---QHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM 616

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN-----------TNT-- 369
            +S +  PNV TYT ++ G+ K  K  RA  + E M   G LPN           TNT  
Sbjct: 617 -KSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTAT 675

Query: 370 ------------------------------------YTSLIYGHCKVGNFERAYDLMDLM 393
                                               Y S+I   CK G  + A  L+  M
Sbjct: 676 SPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKM 735

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQADKITYTILLSEHLKQAE 452
             +G   +   + A++ GLC KG+ +E   ++     + ELQ   + Y++ L ++L Q  
Sbjct: 736 LTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQT-AVKYSLTLDKYLYQGR 794

Query: 453 TKQA 456
             +A
Sbjct: 795 LSEA 798



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 14/216 (6%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA-GLFPTKETYTSMICGYLRDGNISSA 526
           L P   A++ LI A+     +  + + F         FPT      ++ G ++ G +  A
Sbjct: 126 LKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVA 185

Query: 527 VKYFQRMNQI----GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           ++ + +M Q     G   DN T   ++ GLC   K++E  +  +   GK   P  V    
Sbjct: 186 LQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNM 245

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKD 639
           +   YCK+GD   A   L  L  K  + TV T   LI   C             ++  + 
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 640 QNVDRVSLAALKNACYESNKYALFSDLSQ---RIAE 672
            N++   +    N      KY L ++ ++   R+AE
Sbjct: 306 LNMN---VKVFNNVIDAEYKYGLVTEAAEMLRRMAE 338


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 226/481 (46%), Gaps = 23/481 (4%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A+  F+  +   + +  ++ +      +I+ G + R  E    +V+S           +M
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS-----------NM 179

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            + ++ NGL     + N V+   C+LG V+ A EVF  M  +    D  +Y  ++   C+
Sbjct: 180 NMNISPNGL-----SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCK 234

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
             R+ EA   L  M   G         +LI   C KG    + +  +L++ M  KG  PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG---DLSRVTKLVDNMFLKGCFPN 291

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
             T+  LI GLC KG  +KA  L  ++V S    PN  TY  +I+G  K+ +      LL
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRAMDGARLL 350

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+E+G   N + Y+ LI G  K G  E A  L   M ++GC PNI  Y+A+IDGLC++
Sbjct: 351 ISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCRE 410

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G+  EA E+L          +  TY+ L+    K   +++A+ ++  M + G + +   Y
Sbjct: 411 GKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCY 470

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-- 533
           + LI   C   ++KE+   + + +T G+ P    Y+SMI G    G++ +A+K +  M  
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLC 530

Query: 534 -NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
             +    PD +TY  L+ GLC Q  +  A      M+ +G  P  +T  T      ++ D
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD 590

Query: 593 S 593
           S
Sbjct: 591 S 591



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 10/403 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +  L+I A C  GF   + +A E+   M  K   P+ YT+  L+DGLCK+   ++A  L 
Sbjct: 189 SFNLVIKALCKLGF---VDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV-LL 244

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++S+   P+   Y  +I G CK+  ++R   L++ M  +G  PN  TY +LI+G C 
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L++ M    C PN   Y  +I+GL K+ R  +   LL    +R  + ++  
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y++L+S   K+ + ++A+ L+ +M + G  P+I  Y+ +I   CR+ K  E+++     I
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           ++G  P   TY+S++ G+ + G    A++ ++ M++ GC+ +   Y  LI GLC   ++ 
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA------MIILESLDKKLWIRTVN 613
           EA   +  M+  GI P  V   ++    C  G    A      M+  E    +  + T N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            L+  LC +K V  A    + +L +  + D ++     N   E
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSE 587



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 8/223 (3%)

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ++ ++   + K    ++A+ LF RMV        + ++ +++     +       +F+  
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 498 AITAGL----FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            + + +     P   ++  +I    + G +  A++ F+ M +  C PD  TY  L+ GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++DEA    + M  +G SP  V    L    CK+GD +    +++++  K       
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           T NTLI  LC + ++  A     +++      + V+   L N 
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 41/260 (15%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFS 174
           R  + +Y      L   G    A E++  M+SS               F + G  +E   
Sbjct: 394 RPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQ 453

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +  EM   G        + ++   C +G V+ A  V+ +M   G+  D  +Y  M+   C
Sbjct: 454 VWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513

Query: 235 RMGRVTEADRWLSAML---DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +G +  A +    ML   +  +  D  T  +L+   C    +  + +A +LL  M+ +G
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC---MQKDVSRAVDLLNCMLDRG 570

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--------------------PN 331
             P+V T    ++ L +K  + +  R FL+ + +   K                    P 
Sbjct: 571 CDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPK 630

Query: 332 VHTYTAMISGYCKEEKMNRA 351
             T+  ++   CK +K+N A
Sbjct: 631 TSTWAMIVPEICKPKKINAA 650


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 207/418 (49%), Gaps = 14/418 (3%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           DA ++ +++   CR  ++ +A + L  M + G + D+A    LI+ +      G   QAF
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG---QAF 65

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           + L EMV+    P V T+T ++DGLCK G T+ A +L L  +R     PN++TY  ++ G
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKL-LDEMRDKGCSPNIYTYNVIVEG 124

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C+E K++ A+ +LE M  +G  P+  TY S I G CK    + A   +  M     TP+
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPD 181

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           + +Y  +I+GLCK G +  A  +L +   R    D +TY+ L+    K  E ++A+GL  
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+K G  P++ AY +L+ A  R   + ++E    E    G  P   +Y + I G  +  
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A   F RM + GC P+  +Y  L+  LCK+ +LD+A    E    K      +   
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYT 361

Query: 582 TLAYEYCKQG--DSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHK 634
            L    CK G  D A A+   + LD+K+    V   N ++   C  +++   AL  HK
Sbjct: 362 VLLDGLCKGGRFDEACALFS-KVLDEKICEPDVFFYNVMLDSHCKRRQID-KALQIHK 417



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 218/451 (48%), Gaps = 9/451 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR K+   ++ EM + G      T N +V   CE   ++ A+++ +EM  RG
Sbjct: 86  IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y   +   C+  RV EA ++L+ M       D  + T +I   C     G + 
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS---GDLD 199

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L++M  +G  P+V T++ LIDG CK G  E+A  L   +++    +PN+  Y ++
Sbjct: 200 SASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL-GCRPNMVAYNSL 258

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +    +   + +AE +L  M+ +G  P+  +Y + I G CK    ++A  + D M + GC
Sbjct: 259 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 318

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN  +Y+ +++ LCKK  + +A  L+++A ++    D + YT+LL    K     +A  
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378

Query: 459 LFCRMVKAGL-NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           LF +++   +  PD+  Y  ++ + C+++++ ++ +  ++ +         T+  ++ G 
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNILVHGL 437

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             D  +S A      M   G  PD +TYG L+  +CK  K   A + +E  +  G  P  
Sbjct: 438 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           VT   L      +  +  A ++   LD  LW
Sbjct: 498 VTYSALITGLVHENMAEEAYLLFTKLDVALW 528



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 179/388 (46%), Gaps = 42/388 (10%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ K  +P+ +T  +L+ GLC+    EKA R  L  ++     P+   Y A+ISGY K +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKA-RQLLGRMKEMGCVPDDAIYNALISGYSKAK 59

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
              +A   L  M +   LP   TYT+++ G CK G  + A  L+D M  +GC+PNIY YN
Sbjct: 60  DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            I++GLC++ ++ EA ++L++   R    D +TY   +    K     +A     RM   
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM--- 176

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            + PD+ +YTT+I   C+   +  + +   +    G  P   TY+S+I G+ + G +  A
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 527 VKYFQRMNQIGC-----------------------------------APDNITYGALISG 551
           +     M ++GC                                    PD ++Y A I G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           LCK  ++ +A   ++ M+ +G +P   +   L  E CK+ +   A+ ++E   +K  I  
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356

Query: 612 V---NTLIRKLCSEKRVGMAALFFHKLL 636
           +     L+  LC   R   A   F K+L
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVL 384



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 183/379 (48%), Gaps = 14/379 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G + +   M++EM   G      + N  +   C+   V+ A+ VFD M  RG
Sbjct: 258 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +ASSY ++V   C+   + +A   +    ++  I+D    T+L+   C KG  G   
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC-KG--GRFD 374

Query: 279 QAFELLEEMV-RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A  L  +++  K  +P+V+ + V++D  CK+   +KA ++  +++  +    NV T+  
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC--NVVTWNI 432

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C +++++ AE +L  M ++G +P+  TY +L+   CK G    A +L +   K G
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 492

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P++  Y+A+I GL  +   +EAY L  K        D   +  ++  + +       L
Sbjct: 493 CVPDVVTYSALITGLVHENMAEEAYLLFTK-------LDVALWNAMILGYAENGSGDLGL 545

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAA-FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            LF  ++++ + P+   +   I+    + + + ++   F  A+  G FP      ++I  
Sbjct: 546 KLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDV 605

Query: 517 YLRDGNISSAVKYFQRMNQ 535
           + + G++  A + F  M Q
Sbjct: 606 FAKCGDLEEARRIFYSMKQ 624



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C PD  T+  L+ GLC+ ++L++A Q    M   G  P +     L   Y K  D   A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 598 IILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGK 638
             L  + K   + TV T   ++  LC   R   A     ++  K
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDK 109


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 169/329 (51%), Gaps = 1/329 (0%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +++ F  LE MV +G  P++   T LI G CK G T KA R+ ++++      P+V T
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRI-MEIIEDSGAVPDVIT 156

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +ISG C   +   AE LL  M  +G  P+  T+  LI   C+ G   RA D+++ M 
Sbjct: 157 YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMP 216

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K GCTPN  +YN ++ G CK+ +++ A E L K   R    D +TY  LL+   K  +  
Sbjct: 217 KHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVD 276

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ L  ++   G +P +  Y T+I    +  K  ++ K   E    GL P   TY+S++
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R+G +  A+K+F  +  +G  P+ ITY A++ GLCK  K D A  F   M+ +G  
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCK 396

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
           P E +   L      +G +  A+ +L  L
Sbjct: 397 PTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 169/339 (49%), Gaps = 4/339 (1%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R G + E  R+L +M+ RG I D    T LI  FC  G     ++A  ++E +   G  P
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIG---KTRKATRIMEIIEDSGAVP 152

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+ VLI G+C  G    A +L   +VR     P+V T+  +I+  C++  + RA  +
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRR-GCSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           LE+M + G  PN+ +Y  L++G CK    ERA + +  M   GC P+I  YN ++  LCK
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G+V  A ELL +   +      ITY  ++    K  +T QA  L   M   GL PDI  
Sbjct: 272 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIIT 331

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y++L+    R+ K+ E+ KFF +    G+ P   TY +++ G  +      A+ +   M 
Sbjct: 332 YSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           Q GC P   +Y  LI GL  +    EA +    +  +G+
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 6/345 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +S     G L+EGF  +  M   G +P I    + + G  C++G    A  + + +   G
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGF-CKIGKTRKATRIMEIIEDSG 149

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y +++   C  GR  +A++ L+ M+ RG      T  +LI   C KG  G   
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG--- 206

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE+M + G  PN  ++  L+ G CK+   E+A     K+     Y P++ TY  +
Sbjct: 207 RAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCY-PDIVTYNTL 265

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++  CK+ K++ A  LL ++  +G  P   TY ++I G  KVG  ++A  L+D M  +G 
Sbjct: 266 LTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y++++ GL ++G+V EA +         ++ + ITY  ++    K  +T +A+ 
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
               MV+ G  P   +YT LI     +   KE+ +   E    G+
Sbjct: 386 FLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 145/282 (51%), Gaps = 3/282 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
            LE M  +G +P+    TSLI G CK+G   +A  +M+++   G  P++  YN +I G+C
Sbjct: 106 FLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC 165

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             GR  +A +LL    +R      +T+ IL++   ++    +A+ +  +M K G  P+  
Sbjct: 166 STGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           +Y  L+  FC++KKM+ + ++  +  + G +P   TY +++    +DG + +AV+   ++
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL 285

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
           +  GC+P  ITY  +I GL K  K D+A +  + M  KG+ P  +T  +L     ++G  
Sbjct: 286 SSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKV 345

Query: 594 ATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             A+     LE L  K    T N ++  LC  ++   A  F 
Sbjct: 346 DEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 138/269 (51%), Gaps = 4/269 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S     GR  +   ++ +M   G      T N ++   C  GL+  A +V ++M   G
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ SY  ++  +C+  ++  A  +L  M  RG   D  T   L+TA C     G + 
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD---GKVD 276

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ELL ++  KG  P + T+  +IDGL K G T++A +L L  +R+   KP++ TY+++
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL-LDEMRAKGLKPDIITYSSL 335

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G  +E K++ A      ++  G+ PN  TY +++ G CK    +RA D +  M + GC
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGC 395

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            P   +Y  +I+GL  +G  +EA ELL +
Sbjct: 396 KPTEASYTILIEGLAYEGLAKEALELLNE 424



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 3/248 (1%)

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N  +  L + G ++E +  L+    R    D I  T L+    K  +T++A  +   +  
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
           +G  PD+  Y  LI+  C   +  ++EK   + +  G  P+  T+  +I    R G +  
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+   ++M + GC P++++Y  L+ G CK+ K++ A ++   M  +G  P  VT  TL  
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 586 EYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             CK G    A+ +L  L  K     + T NT+I  L    +   AA    ++  K    
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327

Query: 643 DRVSLAAL 650
           D ++ ++L
Sbjct: 328 DIITYSSL 335


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 258/572 (45%), Gaps = 35/572 (6%)

Query: 51  TSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANE 110
           +SS P  P   V  + +++  S   + +L S   +  +++  + +T      V+ S+   
Sbjct: 73  SSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTF-----VLQSVELR 127

Query: 111 AGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER------------------- 151
               VA+ FF+WA    K+ H     I C  SLI    F                     
Sbjct: 128 EKPEVAVRFFFWAGKQKKYVH----KIECHVSLIELLTFSADLVKIRLVFFELKDRGLLM 183

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
                  ++ SF  +G ++E   +   M  NG+     T N +V        +E AE+VF
Sbjct: 184 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 243

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT-LTLLITAFCD 270
           + M    +  D  +Y +M+  YC+ G++ +A      M  +    D  T +TL+   + +
Sbjct: 244 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 303

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           + F         L  EM  +G +   ++++++I GLCK+    +A+ +F + +     + 
Sbjct: 304 RDF----DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVF-ETMNQKGCRA 358

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV  YTA+I  Y K   M  A  L ERMK +G  P+  TY+ L+ G CK G  +   +L 
Sbjct: 359 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D    +G   N   Y ++IDGL K GR+++A  L ++  ++    D   Y  ++    K 
Sbjct: 419 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 478

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            +  QAL LF RM + G +  ++ +T LI    ++ K +E+ KF+ + I  G+ PT  ++
Sbjct: 479 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 538

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++  G    G ++ A K    +  +G  P+   +  +I+ LCK  ++ EAC+  + ++ 
Sbjct: 539 RALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVD 597

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +G       R  L     K G+S   + ++ S
Sbjct: 598 RGREIPGRIRTVLINALRKAGNSDLVIKLMHS 629



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 5/291 (1%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           RMKE G+ P+  TY  L+ G       E A  + ++M      P+   YN +I G CK G
Sbjct: 210 RMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAG 269

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++Q+A E  +    + ++ DKITY  L+     + +    L L+  M + GL    H+Y+
Sbjct: 270 KLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYS 329

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I   C+Q+K  E+   F+     G       YT++I  Y ++G++  A++ F+RM   
Sbjct: 330 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE 389

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD +TY  L++GLCK  +LD+  + ++    KG++   +   +L     K G    A
Sbjct: 390 GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDA 449

Query: 597 MIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL--LGKDQNV 642
             + E + +K   R     N +I  L    ++  A   F ++   G DQ V
Sbjct: 450 ENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTV 500



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 34/329 (10%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S+ +EM   GL +   + + V+G  C+      A  VF+ M  +G  A+ + Y  ++ +
Sbjct: 310 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 369

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKGFR------------- 274
           Y + G + EA R    M + G   D  T ++L+   C     D G               
Sbjct: 370 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 429

Query: 275 --------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
                         G I+ A  L EEM  KG   + Y +  +ID L K G  ++A  LF 
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++   +     V+T+T +I G  KE K   A    ++M ++G+ P   ++ +L  G C  
Sbjct: 490 RM-EEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLC 548

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G   RA  ++D +   G  P   A+  +I+ LCK  R++EA +L      R  +      
Sbjct: 549 GKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIR 607

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLN 469
           T+L++   K   +   + L    +  G +
Sbjct: 608 TVLINALRKAGNSDLVIKLMHSKIGIGYD 636


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +    S++ +M    +         ++   C    V  A  +F EM  +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A R LS M++R    +  T + LI AF  +G    + 
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLV 342

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   P+++T++ LI+G C     ++A  +F  ++  D + PNV TY  +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 401

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M ++GL+ NT TY +LI G  + G+ + A  +   M  +G 
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLCK G++++A  + +   + +++ D  TY I++    K  + +    
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YTT+I+ FCR+   +E++  F+E    G  P   TY ++I   L
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           RDG+ +++ +  + M   G   D  T   +I+ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 227/462 (49%), Gaps = 9/462 (1%)

Query: 168 RLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           +L +   +  EM  +  LP I    N+++    ++   +    + + M    +  D  SY
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +CR  ++  A   L  M+  G   D  TL+ L+  +C  G R  I +A  L+++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC-HGKR--ISEAVALVDQ 175

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M    ++PN  T   LI GL       +A  L  ++V +   +P++ TY  +++G CK  
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 234

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  LL++M++  +  +   YT++I   C   N   A +L   M  +G  PN+  YN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  LC  GR  +A  LL    +R++  + +T++ L+   +K+ +  +A  L+  M+K 
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++PDI  Y++LI  FC   ++ E++  F+  I+   FP   TY ++I G+ +   +   
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  G+ P  +T   L   
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 587 YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
            CK G    A+++ E L K      I T N +I  +C   +V
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 192/398 (48%), Gaps = 6/398 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLI 265
           A  + D M ARG   D  +Y  +V   C+ G +  A   L  M ++G I  D    T +I
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTII 262

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            A C+     ++  A  L  EM  KG +PNV T+  LI  LC  G    A RL   ++  
Sbjct: 263 DALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               PNV T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + 
Sbjct: 320 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  + +LM  + C PN+  YN +I G CK  RV+E  EL ++  QR L  + +TY  L+ 
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              +  +   A  +F +MV  G+ PDI  Y+ L+   C+  K++++   F+    + + P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY  MI G  + G +      F  ++  G  P+ I Y  +ISG C++   +EA   +
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             M   G  P   T  TL     + GD A +  +++ +
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 4/359 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++Y++ +LI+  C++     A  +  K+++   Y+P++ T +++++GYC  ++++ A  L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVAL 172

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +++M      PNT T+ +LI+G         A  L+D M   GC P+++ Y  +++GLCK
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G +  A  LLKK  + +++AD + YT ++           AL LF  M   G+ P++  
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI   C   +  ++ +   + I   + P   T++++I  ++++G +  A K +  M 
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +    PD  TY +LI+G C   +LDEA   +E MI K   P  VT  TL   +CK     
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             M +   + ++  +    T NTLI+ L       MA   F K++      D ++ + L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 5/281 (1%)

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A DL   M +    P+I  +N ++  + K  +      L ++     +  D  +Y I
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L++   ++++   AL +  +M+K G  PDI   ++L+  +C  K++ E+     +     
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   T+ ++I G       S AV    RM   GC PD  TYG +++GLCK+  +D A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRK 618
              + M    I    V   T+    C   +   A+ +   +D K  IR    T N+LIR 
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 299

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           LC+  R   A+     ++ +  N + V+ +AL +A  +  K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 46/367 (12%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K++ A  L   M +   LP+   +  L+    K+  F+    L + M     + ++Y+YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 407 AIIDGLCKKG-----------------------------------RVQEAYELLKKAFQR 431
            +I+  C++                                    R+ EA  L+ + F  
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           E Q + +T+  L+       +  +A+ L  RMV  G  PD+  Y T++   C++  +  +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               ++     +      YT++I       N++ A+  F  M+  G  P+ +TY +LI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKK 606
           LC   +  +A +    MI + I+P  VT   L   + K+G    A      +I  S+D  
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----AL 662
           ++  T ++LI   C   R+  A   F  ++ KD   + V+   L     ++ +      L
Sbjct: 360 IF--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 663 FSDLSQR 669
           F ++SQR
Sbjct: 418 FREMSQR 424


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 220/461 (47%), Gaps = 12/461 (2%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           LN +V       LV ++ EVF +    GV  + +++ +++  YC      EA R ++ M 
Sbjct: 180 LNALVRSNSSHSLV-FSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMG 238

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           + G   DN T   ++TA C    R  + Q  +LL +M   G  PN  T+ +L+ G CK  
Sbjct: 239 EYGCCPDNVTYNTVLTALCK---RSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLK 295

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
           W ++A  + ++L+      P+V TY  M+ G C E K++ A  L ++M+   L+P+  TY
Sbjct: 296 WLKEAAEV-IELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTY 354

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI G  +    + A+ L++ M   G   N   +N +I   C +G++ EA  ++ K  +
Sbjct: 355 NTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVE 414

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                D  TY  +++ + K  +  +A  +   M + GL  D     TL+   C +K++ +
Sbjct: 415 SGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDD 474

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +     +A   G    + TY ++I GY +D     A+K ++ M + G     ITY  +I 
Sbjct: 475 AYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIR 534

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDK 605
           GLC   K D+A      ++ KG+ P E T   + + YC +G    A      ++  SL  
Sbjct: 535 GLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKP 594

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            ++  T N L+R LC E  +      F+  + K + +D V+
Sbjct: 595 DIF--TCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVT 633



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 216/448 (48%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +      +E   ++ +M   G      T N V+   C+   +    ++  +M   G
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  + ++Y ++V  YC++  + EA   +  M  +G + D  T   ++   CD+G    I 
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG---KID 333

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L ++M      P+V T+  LIDG  +   ++ AF+L ++ +++   K N  T+  M
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKL-VEEMKARGVKENGVTHNIM 392

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +C E K++ A  ++ +M E G  P+  TY ++I G+CK G    AY +MD MG++G 
Sbjct: 393 IKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGL 452

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             + +  N ++  +C + ++ +AY L  KA +R    D++TY  L+  + K  +  +AL 
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALK 512

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M + G+   I  Y T+I   C   K  ++     E +  GL P + T   +I GY 
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +G +  A ++  +M +    PD  T   L+ GLC++  L++    + + I KG     V
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV 632

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +   +CK+     A  ++  ++ K
Sbjct: 633 TYNIIISSFCKERRLEDAFDLMTEMEGK 660



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 223/453 (49%), Gaps = 15/453 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV    + G++ E   +  +M +  L     T N ++    E    + A ++ +EM ARG
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  ++ +M+  +C  G++ EA   +  M++ G   D  T   +I  +C  G    + 
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG---KMA 438

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+++++EM RKG K + +T   L+  +C +   + A+ L +K  R   Y  +  TY  +
Sbjct: 439 EAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK-ARKRGYILDEVTYGTL 497

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K+E+ +RA  L E MKE G++    TY ++I G C  G  ++A D ++ + ++G 
Sbjct: 498 IMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGL 557

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N II G C +G V++A++   K  +  L+ D  T  ILL    ++   ++ L 
Sbjct: 558 VPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLT 617

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF   +  G   D   Y  +I++FC++++++++     E     L P + TY +++ G  
Sbjct: 618 LFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLT 677

Query: 519 RDGNISSA----VKYFQRMNQI---GCAPD----NITYGALISGLCKQSKLDEACQFYES 567
           + G    A    +K+ ++  Q+     +P+    ++ Y   IS LC Q K  +A + ++ 
Sbjct: 678 KAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQ 737

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
              KG+S  + T + L     K+  S T   +L
Sbjct: 738 AEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 163/340 (47%), Gaps = 7/340 (2%)

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR---AEMLLERMKEQGLLPNTNTYTSL 373
           ++F K+ R   ++PN+ T   +++   +    +    +  + +   + G+ PN NT+  L
Sbjct: 159 QIFNKMKRL-RFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNIL 217

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I+G+C   N E A  L++ MG+ GC P+   YN ++  LCK+ ++ +  +LL +     L
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             ++ TY IL+  + K    K+A  +   M   G+ PD+  Y T++   C + K+ E+ +
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              +  +  L P   TY ++I G        +A K  + M   G   + +T+  +I   C
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIR 610
            + K+DEA      M+  G SP   T  T+   YCK G  A A  +++ + +   KL   
Sbjct: 398 TEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTF 457

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           T+NTL+  +C EK++  A     K   +   +D V+   L
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTL 497



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 52/357 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE------------------ 200
           M++ + + G++ E + M+ EM   GL L T TLN ++   C                   
Sbjct: 427 MINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRG 486

Query: 201 --LGLVEY---------------AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
             L  V Y               A ++++EM   G+ A   +Y  ++   C  G+  +A 
Sbjct: 487 YILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAV 546

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L+ +L++G + D +T  ++I  +C   + G++++AF+   +MV    KP+++T  +L+
Sbjct: 547 DKLNELLEKGLVPDESTSNIIIHGYC---WEGAVEKAFQFHNKMVEHSLKPDIFTCNILL 603

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
            GLC++G  EK   LF   +     KP +  TY  +IS +CKE ++  A  L+  M+ + 
Sbjct: 604 RGLCREGMLEKGLTLFNTWISKG--KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-------CTPNI----YAYNAIIDG 411
           L P+  TY +++ G  K G  E A  L     ++G        +P +      Y+  I  
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISS 721

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           LC +G+ ++A +L ++A Q+ +  +K TY  L+   LK+ ++     L   MV A +
Sbjct: 722 LCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATI 778


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 200/416 (48%), Gaps = 26/416 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC------ELGLVEYAEEVFD 212
           +V S+         + ++  MT  G P      N  +G  C         L++ AE+++ 
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 411

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM A     +  +        C +G+  +A + +  M+ +G + D +T + +IT  C   
Sbjct: 412 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 471

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +++AF L +EM   G  P+VYT+T+LID  CK G  E+A  LF ++ RS    P V
Sbjct: 472 ---KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTV 527

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MD 391
            TYTA+I  Y K +++ +A  +  RM + G  PN  TY +L+ G CK GN  +A+++   
Sbjct: 528 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 587

Query: 392 LMG---------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           L+G               +    PN+  Y A++DGLCK  +V  A+ELL        + +
Sbjct: 588 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 647

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            I Y  L+    K  +   A  +F +M K G  P +H YT+LI    +  ++  + K   
Sbjct: 648 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 707

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + +     P   TYT+MI G  R G    A+K    M + GC+P+ +TY ALI GL
Sbjct: 708 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 204/443 (46%), Gaps = 33/443 (7%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           ++G  K   +M++    N  P   S  N +V   C      YA ++ + M   G      
Sbjct: 326 QLGWCKRIINMMMTEGCNPNP---SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 382

Query: 225 SYKLMVVAYCRMGRVTEAD------RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            Y + + + C   ++   D      +    ML    +L+   +       C  G      
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG---KFD 439

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--LKLVRSDNYKPNVHTYT 336
           +AF+L++EM+RKG+ P+  T++ +I  LC     EKAF LF  +K+V      P+V+TYT
Sbjct: 440 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV---GVTPDVYTYT 496

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I  +CK   + +A+ L E M+  G  P   TYT+LI+ + K     +A D+   M   
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK----------------ITY 440
           GC PN   Y A++DGLCK G + +A+E+  K       AD                 +TY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L+    K  +   A  L   M+ +G  P+   Y  LI  FC+  K+  +++ F +   
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G  P+  TYTS+I    +DG +  A+K   +M +  C P+ +TY A+I GLC+  + ++
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736

Query: 561 ACQFYESMIGKGISPCEVTRVTL 583
           A +    M  KG SP  VT   L
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTAL 759



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 212/466 (45%), Gaps = 56/466 (12%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR ++   ++ E+      ++   LN +V   C  G+   A E    +   G      +Y
Sbjct: 153 GRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY 212

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V      G+V    R    M + G  +D  T+     A C +G       A +++E 
Sbjct: 213 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG---RWADALDMIE- 268

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
             R+ +K +    T +I GL +  + ++A   FL  +R ++  PNV TY  ++SG+ K++
Sbjct: 269 --REDFKLDTVLCTHMISGLMEASYFDEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKK 325

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++   + ++  M  +G  PN + + SL++ +C   ++  AY L++ M   GC P    YN
Sbjct: 326 QLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 385

Query: 407 AIIDGLCKK-----------------------------------------GRVQEAYELL 425
             I  +C +                                         G+  +A++L+
Sbjct: 386 IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 445

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           K+  ++    D  TY+ +++      + ++A  LF  M   G+ PD++ YT LI +FC+ 
Sbjct: 446 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 505

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
             +++++  F+E  + G  PT  TYT++I  YL+   +  A   F RM   GC P+++TY
Sbjct: 506 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGIS-------PCEVTRVTLA 584
           GAL+ GLCK   + +A + Y  +IG   S       PCE  R TLA
Sbjct: 566 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE-DRHTLA 610



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 153/634 (24%), Positives = 255/634 (40%), Gaps = 95/634 (14%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           +  +  V     +A  + A  FF WA     + H    Y   A +L  +G    A  +++
Sbjct: 105 DSVVVAVLGAVRDAPELCA-RFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLR 163

Query: 158 CMVSSFAEI-GRL--------------KEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
            +     E+ GRL               E    +  + + G      T N +V +    G
Sbjct: 164 EIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAG 223

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA--MLDRGAI-LDNA 259
            V+    V  EM   G C D  +      A C+ GR      W  A  M++R    LD  
Sbjct: 224 QVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR------WADALDMIEREDFKLDTV 277

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK---GWTEKAF 316
             T +I+   +  +     +A   L  M      PNV T+  L+ G  KK   GW ++  
Sbjct: 278 LCTHMISGLMEASY---FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR-- 332

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI-- 374
              + ++ ++   PN   + +++  YC E+    A  LL RM   G  P    Y   I  
Sbjct: 333 --IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 390

Query: 375 -------------------YGH--------------------CKVGNFERAYDLMDLMGK 395
                              YG                     C VG F++A+ L+  M +
Sbjct: 391 ICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMR 450

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y+ +I  LC   +V++A+ L ++     +  D  TYTIL+    K    +Q
Sbjct: 451 KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 510

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  LF  M   G +P +  YT LI A+ + K++ ++   F   + AG  P   TY +++ 
Sbjct: 511 AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVD 570

Query: 516 GYLRDGNISSAVK----------------YFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           G  + GNIS A +                YF   ++   AP+ +TYGAL+ GLCK  K+D
Sbjct: 571 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 630

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LI 616
            A +  ++M+  G  P  +    L   +CK G   +A  +   + K  ++ +V+T   LI
Sbjct: 631 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 690

Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            ++  + R+ +A     ++L      + V+  A+
Sbjct: 691 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 724



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 211/508 (41%), Gaps = 40/508 (7%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C   +  + GR  +   M+         L T     ++    E    + A      M   
Sbjct: 249 CFAHALCKEGRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 305

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               +  +Y+ ++  + +  ++    R ++ M+  G   + +    L+ ++C++      
Sbjct: 306 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK---DY 362

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK------GWTEKAFRLFLKLVRSDNY--K 329
             A++LL  M   G  P    + + I  +C +         + A +++ +++ ++    K
Sbjct: 363 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 422

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            NV  +   +   C   K ++A  L++ M  +G +P+T+TY+ +I   C     E+A+ L
Sbjct: 423 VNVANFARCL---CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 479

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G TP++Y Y  +ID  CK G +++A  L ++          +TYT L+  +LK
Sbjct: 480 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 539

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG------- 502
             +  QA  +F RMV AG  P+   Y  L+   C+   + ++ + + + I          
Sbjct: 540 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 599

Query: 503 ---------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
                    L P   TY +++ G  +   +  A +    M   GC P++I Y ALI G C
Sbjct: 600 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 659

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
           K  K+D A + +  M   G  P   T  +L     K G    AM +L  + K      V 
Sbjct: 660 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 719

Query: 614 T---LIRKLC----SEKRVGMAALFFHK 634
           T   +I  LC    SEK + + +L   K
Sbjct: 720 TYTAMIDGLCRIGESEKALKLLSLMEEK 747


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 4/412 (0%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++  ++ A  V D M ++    D  +Y +M+ + C  G++  A + L+ +L 
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
                   T T+LI A       G + +A +L++EM+ +G KP+++T+  +I G+CK+G 
Sbjct: 222 DNCQPTVITYTILIEA---TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++AF +   L      +P+V +Y  ++     + K    E L+ +M  +   PN  TY+
Sbjct: 279 VDRAFEMVRNL-ELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A +L+ LM ++G TP+ Y+Y+ +I   C++GR+  A E L+     
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + Y  +L+   K  +  QAL +F ++ + G +P+  +Y T+ +A         +
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                E ++ G+ P + TY SMI    R+G +  A +    M      P  +TY  ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            CK  ++++A    ESM+G G  P E T   L       G  A AM +   L
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 233/476 (48%), Gaps = 12/476 (2%)

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           +C  G    +  + + M  +G   D      ++  +  +  + +A R +  +L++    D
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPD 157

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                 LI  FC       I  A  +L+ M  K + P+  T+ ++I  LC +G  + A +
Sbjct: 158 VFAYNALINGFCKMN---RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +  +L+ SDN +P V TYT +I     E  ++ A  L++ M  +GL P+  TY ++I G 
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  +RA++++  +  +G  P++ +YN ++  L  +G+ +E  +L+ K F  +   + 
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY+IL++   +  + ++A+ L   M + GL PD ++Y  LIAAFCR+ ++  + +F + 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I+ G  P    Y +++    ++G    A++ F ++ ++GC+P++ +Y  + S L     
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNT 614
              A      M+  GI P E+T  ++    C++G  D A  +++ + S +    + T N 
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAALKNACYESNKYALFSDL 666
           ++   C   R+  A      ++G     ++    V +  +  A Y +    L +DL
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 4/313 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ EM + GL     T N ++   C+ G+V+ A E+   +  +G   D  SY
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ A    G+  E ++ ++ M       +  T ++LIT  C     G I++A  LL+ 
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD---GKIEEAMNLLKL 358

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  P+ Y++  LI   C++G  + A   FL+ + SD   P++  Y  +++  CK  
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FLETMISDGCLPDIVNYNTVLATLCKNG 417

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K ++A  +  ++ E G  PN+++Y ++       G+  RA  ++  M   G  P+   YN
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  LC++G V EA+ELL      E     +TY I+L    K    + A+ +   MV  
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537

Query: 467 GLNPDIHAYTTLI 479
           G  P+   YT LI
Sbjct: 538 GCRPNETTYTVLI 550



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 4/258 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ +EG  ++ +M +        T + ++   C  G +E A  +   M  +G+  DA SY
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ A+CR GR+  A  +L  M+  G + D      ++   C     G   QA E+  +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN---GKADQALEIFGK 428

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  ++  +   L   G   +A  + L+++ S+   P+  TY +MIS  C+E 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM-SNGIDPDEITYNSMISCLCREG 487

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  LL  M+     P+  TY  ++ G CK    E A ++++ M   GC PN   Y 
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 407 AIIDGLCKKGRVQEAYEL 424
            +I+G+   G   EA EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 37/301 (12%)

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEG-------CT-------------------------- 399
           + +  C+ GN+  +  L++ M ++G       CT                          
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 400 -PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++AYNA+I+G CK  R+ +A  +L +   ++   D +TY I++     + +   AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++     P +  YT LI A   +  + E+ K   E ++ GL P   TY ++I G  
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A +  + +   G  PD I+Y  L+  L  Q K +E  +    M  +   P  V
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L    C+ G    AM +L+ + +K       + + LI   C E R+ +A  F   +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 636 L 636
           +
Sbjct: 395 I 395



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 49/239 (20%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +  T+L  +G  E A  +++ M               +++F   GRL      +  M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 181 NNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
           ++G LP I +  N V+   C+ G  + A E+F ++   G   ++SSY  M  A    G  
Sbjct: 396 SDGCLPDIVN-YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------FRGS------- 276
             A   +  M+  G   D  T   +I+  C +G                F  S       
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 277 ---------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                    I+ A  +LE MV  G +PN  T+TVLI+G+   G+  +A  L   LVR D
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 199/443 (44%), Gaps = 11/443 (2%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           +T N ++   C    + +A+     M   G   DA ++  +++ YCR  ++  A      
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M  RG   D  +   LI  FC+ G    I +A EL  EM     +P++YTH  L+ GLC 
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAG---RIDEALELFREMT----QPDMYTHAALVKGLCD 242

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G  E+   +  K+ +   ++P    Y A++  +C+E+K   AE +L  M + GL+P   
Sbjct: 243 AGRGEEGLCMLQKM-KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T T ++  +C+ G    A  + + M  +GC PN++ YNAI+ G C  G+V +A  LL + 
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +  ++ D +TY +L+           A  L   M   GL  D + Y  LI A C+  K+
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+   F      G+ P   T+ ++I G  + G    A  + + M   G APD  TY   
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-- 606
           I  LCK     E   F + M+ K + P  V    +      + +   A  I   +  +  
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 607 -LWIRTVNTLIRKLCSEKRVGMA 628
              + T  T +R  C+E R+  A
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEA 564



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR +EG  M+ +M   G    T     +V + C     E AE++ +EM   G
Sbjct: 236 LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +  ++V AYCR GR++ A R   +M  +G   +  T   ++  FC+ G    + 
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAG---KVY 352

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL++M   G +P+V T+ +LI G C  G    AFRL L+L+  +    + +TY  +
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL-LRLMEGNGLAADQYTYNVL 411

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK  K++ A  L + ++ +G+ PN+ T+ ++I G CK G F+ A   ++ M   G 
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+  I+ LCK    QE    + +  Q++++   + YTI+++    +     A  
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ +MV  G +PD+  YTT + A+C + ++ E+E    E            Y ++I G+ 
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITY 545
             G    AV   + M  +   P++ T+
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 202/444 (45%), Gaps = 17/444 (3%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G      T N ++   C    +E A ++F +M  RG   DA SY  ++  +C  GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA      M       D  T   L+   CD G RG  ++   +L++M   GW+P    
Sbjct: 215 IDEALELFREMTQP----DMYTHAALVKGLCDAG-RG--EEGLCMLQKMKELGWRPTTRA 267

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+D  C++   E+A ++  ++  S    P V T T +++ YC+E +M+ A  + E M
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDS-GLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           + +G  PN  TY +++ G C  G   +A  L+D M + G  P++  YN +I G C  G +
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A+ LL+      L AD+ TY +L+    K  +  +A  LF  +   G+ P+   + T+
Sbjct: 387 GSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C+  K   +  F +  I+AG  P   TY+  I    +       + +   M Q   
Sbjct: 447 INGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDV 506

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P  + Y  +I+ L  +     A + +  M+ +G SP  VT  T    YC +G    A  
Sbjct: 507 KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAEN 566

Query: 599 ILESLDKKLWIRTV------NTLI 616
           ++  + K    RT+      NTLI
Sbjct: 567 VVTEMKK---CRTIVDAMAYNTLI 587



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 164/362 (45%), Gaps = 7/362 (1%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+    +   T    RLF  + R     P   TY A+I   C+   +  A+  L  M   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P+  T+ SLI G+C+    E A+DL   M   G + +  +Y A+I+G C+ GR+ EA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            EL    F+   Q D  T+  L+         ++ L +  +M + G  P   AY  L+  
Sbjct: 219 LEL----FREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           +CR++K +E+EK   E   +GL P   T T ++  Y R+G +S AV+ F+ M   GC P+
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             TY A++ G C   K+ +A    + M   G+ P  VT   L    C  G   +A  +L 
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 602 SLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            ++         T N LI  LC   +V  A   F  L  +    + V+   + N   ++ 
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 659 KY 660
           K+
Sbjct: 455 KF 456



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 36/415 (8%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P   T+  LI  LC++     A R    +VRS  ++P+  T+ ++I GYC+ +++  A  
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRS-GWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-------------------- 393
           L  +M  +G   +  +Y +LI G C+ G  + A +L   M                    
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGR 245

Query: 394 GKEGC-----------TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           G+EG             P   AY A++D  C++ + +EA ++L + F   L    +T TI
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI 305

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++ + ++     A+ +F  M   G  P++  Y  ++  FC   K+ ++     +    G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY  +I G   DG+I SA +  + M   G A D  TY  LI  LCK  K+DEAC
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKL 619
             ++ +  +GI P  VT  T+    CK G    A   LE++    +     T +  I  L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL-SQRIAEG 673
           C  K       F  ++L KD     V+   + N  +    Y L + +  Q +++G
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 182/437 (41%), Gaps = 55/437 (12%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +   F ++  M  NGL     T N ++   C+ G V+ A  +FD +  RG+  ++ ++
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G+   A  +L  M+  G   D  T +  I   C    +GS +  F  ++E
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKT--KGSQEGLF-FIDE 500

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M++K  KP+   +T++I+ L  +     A R++ ++V S    P+V TYT  +  YC E 
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV-SQGCSPDVVTYTTSVRAYCNEG 559

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA-------------------- 386
           +++ AE ++  MK+   + +   Y +LI GH  +G  +RA                    
Sbjct: 560 RLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFF 619

Query: 387 -------------------------------YDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
                                          ++L +LM K     +   Y +I++G  ++
Sbjct: 620 ILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEE 679

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
            R+ E   L+    +  L  ++  Y  L++   K      A  L C M+  G  P++  Y
Sbjct: 680 RRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFY 739

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             L++    + +   +++ F+ +        +  +  +I G++R G+          + Q
Sbjct: 740 QYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQ 799

Query: 536 IGCAPDNITYGALISGL 552
           + C P + TY  L   L
Sbjct: 800 MKCKPSDETYAMLTEEL 816


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 4/412 (0%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++  ++ A  V D M ++    D  +Y +M+ + C  G++  A + L  +L 
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
                   T T+LI A       G + +A +LL+EM+ +G KP+++T+  +I G+CK+G 
Sbjct: 218 DNCQPTVITYTILIEA---TMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++AF +   L      +P+V +Y  ++     + K    E L+ +M  +   PN  TY+
Sbjct: 275 VDRAFEMIRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A +L+ LM ++G TP+ Y+Y+ +I   C++GR+  A E L+     
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + Y  +L+   K  +  QAL +F ++ + G +P+  +Y T+ +A         +
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                E ++ G+ P + TY SMI    R+G +  A +    M      P  +TY  ++ G
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            CK  ++++A    +SM+G G  P E T   L       G  A AM +   L
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 234/476 (49%), Gaps = 12/476 (2%)

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           +C  G    +  + + M  +G   D      ++  +  +  V +A R +  +L++    D
Sbjct: 95  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKFGQPD 153

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                 LI  FC       I  A  +L+ M  K + P+  T+ ++I  LC +G  + A +
Sbjct: 154 VFAYNALINGFCKMN---RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +  +L+ SDN +P V TYT +I     E  ++ A  LL+ M  +GL P+  TY ++I G 
Sbjct: 211 VLDQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  +RA++++  +  +GC P++ +YN ++  L  +G+ +E  +L+ K F  +   + 
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY+IL++   +  + ++A+ L   M + GL PD ++Y  LIAAFCR+ ++  + +F + 
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I+ G  P    Y +++    ++G    A++ F ++ ++GC+P++ +Y  + S L     
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNT 614
              A      M+  GI P E+T  ++    C++G  D A  +++ + S +    + T N 
Sbjct: 450 KIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNI 509

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAALKNACYESNKYALFSDL 666
           ++   C   R+  A      ++G     ++    V +  +  A Y +    L +DL
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 4/313 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ EM + GL     T N ++   C+ G+V+ A E+   +  +G   D  SY
Sbjct: 238 GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ A    G+  E ++ ++ M       +  T ++LIT  C     G I++A  LL+ 
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD---GKIEEAMNLLKL 354

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  P+ Y++  LI   C++G  + A   FL+ + SD   P++  Y  +++  CK  
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FLETMISDGCLPDIVNYNTVLATLCKNG 413

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K ++A  +  ++ E G  PN+++Y ++       G+  RA  ++  M   G  P+   YN
Sbjct: 414 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYN 473

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  LC++G V +A+ELL      E     +TY I+L    K    + A+ +   MV  
Sbjct: 474 SMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533

Query: 467 GLNPDIHAYTTLI 479
           G  P+   YT LI
Sbjct: 534 GCRPNETTYTVLI 546



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 4/258 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ +EG  ++ +M +        T + ++   C  G +E A  +   M  +G+  DA SY
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ A+CR GR+  A  +L  M+  G + D      ++   C     G   QA E+  +
Sbjct: 368 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN---GKADQALEIFGK 424

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  ++  +   L   G   +A  + L++V S+   P+  TY +MIS  C+E 
Sbjct: 425 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV-SNGIDPDEITYNSMISCLCREG 483

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +++A  LL  M+     P+  TY  ++ G CK    E A D++D M   GC PN   Y 
Sbjct: 484 MVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYT 543

Query: 407 AIIDGLCKKGRVQEAYEL 424
            +I+G+   G   EA EL
Sbjct: 544 VLIEGIGFAGYRAEAMEL 561



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 37/301 (12%)

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEG-------CT-------------------------- 399
           + +  C+ GN+  +  L++ M ++G       CT                          
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 400 -PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++AYNA+I+G CK  R+ +A  +L +   ++   D +TY I++     + +   AL 
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++     P +  YT LI A   +  + E+ K   E ++ GL P   TY ++I G  
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A +  + +   GC PD I+Y  L+  L  Q K +E  +    M  +   P  V
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L    C+ G    AM +L+ + +K       + + LI   C E R+ +A  F   +
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 636 L 636
           +
Sbjct: 391 I 391



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 19/202 (9%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVM------ 156
           ++A+   E    VA+ F    I        +    V AT L  NG  ++A E+       
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT-LCKNGKADQALEIFGKLGEV 428

Query: 157 ---------QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
                      M S+    G       M++EM +NG+     T N ++   C  G+V+ A
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            E+  +M +        +Y ++++ +C+  R+ +A   L +M+  G   +  T T+LI  
Sbjct: 489 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548

Query: 268 FCDKGFRGSIKQAFELLEEMVR 289
               GF G   +A EL  ++VR
Sbjct: 549 I---GFAGYRAEAMELANDLVR 567


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 233/502 (46%), Gaps = 14/502 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+ +   G+L+    +   +    +P    T   VV   C  G +  A  V DEM  RG
Sbjct: 133 MVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                  Y +++ A CR G    A R L  +  RG  LD     L++ A CD+G   S+ 
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG---SVD 246

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL ++   G +P+V ++  ++ GLC          L  ++VR     PN+ T+  +
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM-ACPPNIVTFNTL 305

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C+     R   +L +M E G  P+   Y ++I G CK G+ E A+++++ M   G 
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN ++ GLC   R +E  ELL + F ++   D +T+ IL+    +     + + 
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  PD+  YTT+I  FC++  + E+    +     G  P   +YT ++ G  
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
                  A     +M Q GC  + IT+  LI+ LCK+  +++A +  + M+  G SP  +
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 579 TRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
           +  T+     K G +  A+ +L  + +K +   T+  +++   L  E R+      F  +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 636 LGKDQNVDRVSLAALKNACYES 657
               Q+    S A L NA   S
Sbjct: 606 ----QDTTIRSDAVLYNAVISS 623



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 200/405 (49%), Gaps = 28/405 (6%)

Query: 137 IVCATSLIS----NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           IV   +LIS    NG FER HEV+  MV         + G +  I M             
Sbjct: 299 IVTFNTLISYLCRNGLFERVHEVLAQMV---------EHGCTPDIRMYAT---------- 339

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            ++   C+ G +E A E+ + M + G+  +   Y  ++   C   R  E +  L+ M D+
Sbjct: 340 -IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 398

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
              LD+ T  +L+  FC  G    + +  ELLE+M+  G  P+V T+T +I+G CK+G  
Sbjct: 399 DCPLDDVTFNILVDFFCQNGL---VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++A  + LK + +   KPN  +YT ++ G C  E+   AE L+ +M +QG   N  T+ +
Sbjct: 456 DEAV-MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 514

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   CK G  E+A +L+  M   GC+P++ +Y+ +IDGL K G+  EA ELL     + 
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  + I Y+ + S   ++    + + +F  +    +  D   Y  +I++ C++ + + + 
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +F    +++G  P + TYT +I G   +G +  A +    +   G
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 220/522 (42%), Gaps = 74/522 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +    GR+ +  +++ EM   G   I    + ++  AC  G    A  V +++ ARG
Sbjct: 165 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 224

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-----------------------------DRW---- 245
              D  +  L++ A C  G V EA                              RW    
Sbjct: 225 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 284

Query: 246 --LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             +  M+      +  T   LI+  C  G     ++  E+L +MV  G  P++  +  +I
Sbjct: 285 ELMEEMVRMACPPNIVTFNTLISYLCRNGL---FERVHEVLAQMVEHGCTPDIRMYATII 341

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK---------------- 347
           DG+CK+G  E A  + L  + S   KPNV  Y  ++ G C  E+                
Sbjct: 342 DGICKEGHLEVAHEI-LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400

Query: 348 -------------------MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
                              ++R   LLE+M E G +P+  TYT++I G CK G  + A  
Sbjct: 401 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 460

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M   GC PN  +Y  ++ GLC   R  +A +L+ +  Q+    + IT+  L++   
Sbjct: 461 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 520

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K  E+ +     +  G+ P   
Sbjct: 521 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 580

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+S+     R+G I+  ++ F  +       D + Y A+IS LCK+ + + A +F   M
Sbjct: 581 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           +  G  P E T   L      +G    A  +L  L  K  +R
Sbjct: 641 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 682



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 189/415 (45%), Gaps = 10/415 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM   +  +  L E      EM     P    T N ++   C  GL E   EV  +M   
Sbjct: 275 CMAKRWGCVQELME------EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 328

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y  ++   C+ G +  A   L+ M   G   +      L+   C        
Sbjct: 329 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE---RW 385

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++  ELL EM  K    +  T  +L+D  C+ G  ++   L  +++      P+V TYT 
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH-GCMPDVITYTT 444

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CKE  ++ A MLL+ M   G  PNT +YT ++ G C    +  A DLM  M ++G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   +N +I+ LCKKG V++A ELLK+        D I+Y+ ++    K  +T +AL
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   MV  G++P+   Y+++ +A  R+ ++ +  + F       +      Y ++I   
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G    A+++   M   GC P+  TY  LI GL  +  + EA +    +  KG
Sbjct: 625 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 47/472 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G +E A  +     A  V  +A +Y  +V A C  GR+ +A   L  M  
Sbjct: 131 NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 252 RGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           RG         +++ A C   GFR +++    +LE++  +G   +V    ++++ +C +G
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVR----VLEDLHARGCALDVGNCNLVLNAICDQG 243

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             ++A  L L+ + S   +P+V +Y A++ G C  ++    + L+E M      PN  T+
Sbjct: 244 SVDEALHL-LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 302

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI   C+ G FER ++++  M + GCTP+I  Y  IIDG+CK+G ++ A+E+L     
Sbjct: 303 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN---- 358

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                                          RM   GL P++  Y TL+   C  ++ +E
Sbjct: 359 -------------------------------RMPSYGLKPNVVCYNTLLKGLCSAERWEE 387

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +E+   E           T+  ++  + ++G +   ++  ++M + GC PD ITY  +I+
Sbjct: 388 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 447

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           G CK+  +DEA    +SM   G  P  ++   +    C       A  ++  + ++   L
Sbjct: 448 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 507

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T NTLI  LC +  V  A     ++L    + D +S + + +   ++ K
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 185/441 (41%), Gaps = 72/441 (16%)

Query: 229 MVVAYCRMGRVT-------------------------------EADRWLSAMLDRGAILD 257
           ++ + C  GR                                 E+ R L+A +    +  
Sbjct: 101 LIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PVPP 157

Query: 258 NA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           NA T   ++ A C    RG I  A  +L+EM R+G  P    + V+++  C+ G    A 
Sbjct: 158 NAYTYFPVVRALC---ARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 317 RLF-------------------------------LKLVR---SDNYKPNVHTYTAMISGY 342
           R+                                L L+R   S   +P+V +Y A++ G 
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++    + L+E M      PN  T+ +LI   C+ G FER ++++  M + GCTP+I
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  IIDG+CK+G ++ A+E+L +     L+ + + Y  LL         ++   L   
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M       D   +  L+  FC+   +    +  ++ +  G  P   TYT++I G+ ++G 
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 454

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           I  AV   + M   GC P+ I+Y  ++ GLC   +  +A      MI +G     +T  T
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 514

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L    CK+G    A+ +L+ +
Sbjct: 515 LINFLCKKGLVEQAIELLKQM 535



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 54/345 (15%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVI 177
           +R+Y      +   G+ E AHE++  M S                     R +E   ++ 
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM +   PL   T N +V   C+ GLV+   E+ ++M   G   D  +Y  ++  +C+ G
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453

Query: 238 RVTE-----------------------------ADRWLSA------MLDRGAILDNATLT 262
            + E                             A+RW+ A      M+ +G  L+  T  
Sbjct: 454 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 513

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C KG    ++QA ELL++M+  G  P++ +++ +IDGL K G T++A  L L +
Sbjct: 514 TLINFLCKKGL---VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL-LNV 569

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PN   Y+++ S   +E ++N+   + + +++  +  +   Y ++I   CK G 
Sbjct: 570 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 629

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            ERA + +  M   GC PN   Y  +I GL  +G V+EA E+L +
Sbjct: 630 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 674



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 131/322 (40%), Gaps = 6/322 (1%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y AM++GYC+  ++  A  L   +    + PN  TY  ++   C  G    A  ++D M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P    Y+ I++  C+ G  + A  +L+    R    D     ++L+    Q    
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   +   G  PD+ +Y  ++   C  K+    ++  +E +     P   T+ ++I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R+G      +   +M + GC PD   Y  +I G+CK+  L+ A +    M   G+ 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 575 PCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALF 631
           P  V   TL    C       T  ++ E  DK   +   T N L+   C    V      
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
             ++L      D ++   + N 
Sbjct: 427 LEQMLEHGCMPDVITYTTVING 448


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 258/581 (44%), Gaps = 53/581 (9%)

Query: 51  TSSSPSPPQSLVKTVCSMV---------LESYYQQFHLRSSPPRLNLQIDIDSLTHEQAI 101
           +SS P  P   V  + +++         L+S+ ++F ++ SP  +               
Sbjct: 71  SSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTF------------- 117

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFER---------- 151
            V+ S+       VA+ FF+WA    K+ H     I C  SLI    F            
Sbjct: 118 -VLQSVELREKPEVAVRFFFWAGKQKKYVH----KIECHVSLIELLTFSADLVKIRLVFF 172

Query: 152 ---------AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
                           ++ SF  +G ++E   +   M  NG+     T N +V       
Sbjct: 173 ELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSM 232

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT-L 261
            +E AE+VF+ M    +  D  +Y +M+  YC+ G++ +A      M  +    D  T +
Sbjct: 233 FIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYM 292

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           TL+   + ++ F         L  EM  +G +   ++++++I GLCK+    +A+ +F +
Sbjct: 293 TLIQACYSERDF----DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVF-E 347

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            +     + NV  YTA+I  Y K   M  A  L ERMK +G  P+  TY+ L+ G CK G
Sbjct: 348 TMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSG 407

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +   +L D    +G   N   Y ++IDGL K GR+++A  L ++  ++    D   Y 
Sbjct: 408 RLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYN 467

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++    K  +  QAL LF RM + G +  ++ +T LI    ++ K +E+ KF+ + I  
Sbjct: 468 AIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDK 527

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ PT  ++ ++  G    G ++ A K    +  +G  P+   +  +I+ LCK  ++ EA
Sbjct: 528 GITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEA 586

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           C+  + ++ +G       R  L     K G+S   + ++ S
Sbjct: 587 CKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHS 627



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 5/291 (1%)

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           RMKE G+ P+  TY  L+ G       E A  + ++M      P+   YN +I G CK G
Sbjct: 208 RMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAG 267

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++Q+A E  +    + ++ DKITY  L+     + +    L L+  M + GL    H+Y+
Sbjct: 268 KLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYS 327

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I   C+Q+K  E+   F+     G       YT++I  Y ++G++  A++ F+RM   
Sbjct: 328 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE 387

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD +TY  L++GLCK  +LD+  + ++    KG++   +   +L     K G    A
Sbjct: 388 GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDA 447

Query: 597 MIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL--LGKDQNV 642
             + E + +K   R     N +I  L    ++  A   F ++   G DQ V
Sbjct: 448 ENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTV 498



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 34/329 (10%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            S+ +EM   GL +   + + V+G  C+      A  VF+ M  +G  A+ + Y  ++ +
Sbjct: 308 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 367

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKGFR------------- 274
           Y + G + EA R    M + G   D  T ++L+   C     D G               
Sbjct: 368 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 427

Query: 275 --------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
                         G I+ A  L EEM  KG   + Y +  +ID L K G  ++A  LF 
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++   +     V+T+T +I G  KE K   A    ++M ++G+ P   ++ +L  G C  
Sbjct: 488 RM-EEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLC 546

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G   RA  ++D +   G  P   A+  +I+ LCK  R++EA +L      R  +      
Sbjct: 547 GKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIR 605

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLN 469
           T+L++   K   +   + L    +  G +
Sbjct: 606 TVLINALRKAGNSDLVIKLMHSKIGIGYD 634


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +    S++ +M    +         ++   C    V  A  +F EM  +G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A R LS M++R    +  T + LI AF  +G    + 
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLV 326

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   P+++T++ LI+G C     ++A  +F  ++  D + PNV TY  +
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 385

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M ++GL+ NT TY +LI G  + G+ + A  +   M  +G 
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLCK G++++A  + +   + +++ D  TY I++    K  + +    
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YTT+I+ FCR+   +E++  F+E    G  P   TY ++I   L
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           RDG+ +++ +  + M   G   D  T   +I+ L
Sbjct: 566 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 227/462 (49%), Gaps = 9/462 (1%)

Query: 168 RLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           +L +   +  EM  +  LP I    N+++    ++   +    + + M    +  D  SY
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 102

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  +CR  ++  A   L  M+  G   D  TL+ L+  +C  G R  I +A  L+++
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC-HGKR--ISEAVALVDQ 159

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M    ++PN  T   LI GL       +A  L  ++V +   +P++ TY  +++G CK  
Sbjct: 160 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 218

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  LL++M++  +  +   YT++I   C   N   A +L   M  +G  PN+  YN
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  LC  GR  +A  LL    +R++  + +T++ L+   +K+ +  +A  L+  M+K 
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            ++PDI  Y++LI  FC   ++ E++  F+  I+   FP   TY ++I G+ +   +   
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           ++ F+ M+Q G   + +TY  LI GL +    D A + ++ M+  G+ P  +T   L   
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458

Query: 587 YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
            CK G    A+++ E L K      I T N +I  +C   +V
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 192/398 (48%), Gaps = 6/398 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLI 265
           A  + D M ARG   D  +Y  +V   C+ G +  A   L  M ++G I  D    T +I
Sbjct: 188 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTII 246

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            A C+     ++  A  L  EM  KG +PNV T+  LI  LC  G    A RL   ++  
Sbjct: 247 DALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               PNV T++A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + 
Sbjct: 304 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  + +LM  + C PN+  YN +I G CK  RV+E  EL ++  QR L  + +TY  L+ 
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              +  +   A  +F +MV  G+ PDI  Y+ L+   C+  K++++   F+    + + P
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY  MI G  + G +      F  ++  G  P+ I Y  +ISG C++   +EA   +
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             M   G  P   T  TL     + GD A +  +++ +
Sbjct: 543 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 4/359 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++Y++ +LI+  C++     A  +  K+++   Y+P++ T +++++GYC  ++++ A  L
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVAL 156

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +++M      PNT T+ +LI+G         A  L+D M   GC P+++ Y  +++GLCK
Sbjct: 157 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G +  A  LLKK  + +++AD + YT ++           AL LF  M   G+ P++  
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y +LI   C   +  ++ +   + I   + P   T++++I  ++++G +  A K +  M 
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           +    PD  TY +LI+G C   +LDEA   +E MI K   P  VT  TL   +CK     
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396

Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             M +   + ++  +    T NTLI+ L       MA   F K++      D ++ + L
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 455



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 5/281 (1%)

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A DL   M +    P+I  +N ++  + K  +      L ++     +  D  +Y I
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L++   ++++   AL +  +M+K G  PDI   ++L+  +C  K++ E+     +     
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   T+ ++I G       S AV    RM   GC PD  TYG +++GLCK+  +D A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRK 618
              + M    I    V   T+    C   +   A+ +   +D K  IR    T N+LIR 
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 283

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           LC+  R   A+     ++ +  N + V+ +AL +A  +  K
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 46/367 (12%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K++ A  L   M +   LP+   +  L+    K+  F+    L + M     + ++Y+YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 407 AIIDGLCKKG-----------------------------------RVQEAYELLKKAFQR 431
            +I+  C++                                    R+ EA  L+ + F  
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           E Q + +T+  L+       +  +A+ L  RMV  G  PD+  Y T++   C++  +  +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               ++     +      YT++I       N++ A+  F  M+  G  P+ +TY +LI  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKK 606
           LC   +  +A +    MI + I+P  VT   L   + K+G    A      +I  S+D  
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----AL 662
           ++  T ++LI   C   R+  A   F  ++ KD   + V+   L     ++ +      L
Sbjct: 344 IF--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 663 FSDLSQR 669
           F ++SQR
Sbjct: 402 FREMSQR 408


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 232/478 (48%), Gaps = 7/478 (1%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV 176
            +FF +     +FR  +  Y V A  L  +  F  A  +++ +VS   +       F  +
Sbjct: 102 FAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGK-NSASSVFISL 160

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           +EM   G P+    ++ ++    +LG +    + F                 ++    ++
Sbjct: 161 VEM--RGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKL 218

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
                   +   +LD G  L+     +L+  FC +G   +I  A ++ +E+ ++  +P V
Sbjct: 219 NPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEG---NICDAQKVFDEITKRSLRPTV 275

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            +   LI+G CK G  +  FRL   + +S   +P+V TY+A+I+  CKE KM+ A  L  
Sbjct: 276 VSFNTLINGYCKVGNLDVGFRLKHHMEKS-RTRPDVFTYSALINALCKENKMDGAHRLFY 334

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M E+GL+PN   +T+LI+GH + G  +   +    M  +G  P+I  YN +++G CK G
Sbjct: 335 EMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            +  A  ++    +R L+ DK+TYT L+    +  +   AL +   M + G+  D   ++
Sbjct: 395 DLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFS 454

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI   C++ ++ ++E+  +E + AG+ P   TYT M+  + + G+  +  K  + M   
Sbjct: 455 ALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           G  P+ +TY  L++GLCK  ++  A    ++M+  G+ P ++T  TL   + +  +++
Sbjct: 515 GHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANAS 572



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 208/412 (50%), Gaps = 7/412 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           L+ +   R G+ + +  ++S +  RG  + +  +  L+  + D GF   + Q F L    
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSR-- 197

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            +  +   +     L+D + K   T   +  +++++ +  +  NV+ +  +++ +CKE  
Sbjct: 198 -KHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDA-GFPLNVYVFNILMNKFCKEGN 255

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A+ + + + ++ L P   ++ +LI G+CKVGN +  + L   M K    P+++ Y+A
Sbjct: 256 ICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSA 315

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+ LCK+ ++  A+ L  +  +R L  + + +T L+  H +  +       + +M+  G
Sbjct: 316 LINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKG 375

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           L PDI  Y TL+  FC+   +  +       I  GL P K TYT++I G+ R G++ +A+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTAL 435

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  + M+Q G   D + + ALI G+CK+ ++ +A +    M+  G+ P +VT   +   +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAF 495

Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
           CK+GD+ T   +L+ +     I  V   N L+  LC   ++  A +    +L
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAML 547



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 191/386 (49%), Gaps = 9/386 (2%)

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
           GF M  E+ + G PL     N ++   C+ G +  A++VFDE+  R +     S+  ++ 
Sbjct: 226 GFYM--EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLIN 283

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            YC++G +    R    M       D  T + LI A C +     +  A  L  EM  +G
Sbjct: 284 GYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKEN---KMDGAHRLFYEMCERG 340

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PN    T LI G  + G  +     + K++ S   +P++  Y  +++G+CK   +  A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGQIDLMKESYQKML-SKGLQPDIVLYNTLVNGFCKNGDLVAA 399

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +++ M  +GL P+  TYT+LI G C+ G+ + A ++   M + G   +   ++A+I G
Sbjct: 400 RNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICG 459

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           +CK+GRV +A   L++  +  ++ D +TYT+++    K+ + +    L   M   G  P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y  L+   C+  +MK ++      +  G+ P   TY +++ G+ R  N   A K+++
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASKHYK 576

Query: 532 RMNQIGCAPDNITYGALISGLCKQSK 557
           +  +IG   D  +Y +L++ L + SK
Sbjct: 577 QKPEIGIVADLASYKSLVNELYRASK 602


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 229/487 (47%), Gaps = 20/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+ +  +G+++    +   +    +P    T   VV   C  G +  A  V DEM +R 
Sbjct: 90  MVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS 146

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                  Y +++ + CR G  + A R L A+  +G+ LD     L+I A CD+G    + 
Sbjct: 147 CVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG---CVD 203

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGW--TEKAFRLFLKL------VRSDNYK 329
           +  E+L ++   G + ++ ++  ++ GLC  K W   E+     +K+      +      
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++  Y  +I G CKE     A  +L RM   GL PN   Y +++ G C    +E+A +L
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M ++ C  +   +N ++D  C+ G V    ELL++  +     D ITYT +++   K
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           +    +A+ L   M   G  P+  +YT ++   C  ++  ++E+     I  G  P   T
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           + ++I    + G +  A++  ++M   GC PD I+Y  +I GL K  K +EA +    MI
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRV 625
            KGI+P  +T  ++A+   ++G     + + +++ +   IR+     N +I  LC  +  
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNI-QDATIRSDAVLYNAVISSLCKRRET 562

Query: 626 GMAALFF 632
            +A  F 
Sbjct: 563 DLAIDFL 569



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 189/455 (41%), Gaps = 51/455 (11%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFR 274
           A G  A    Y  MV  YCR+G+V  A R  +A+     +  NA T   ++   C    R
Sbjct: 77  AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV----PVPPNAYTYFPVVRGLCG---R 129

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  +L+EM  +   P    + V+I+  C+ G    A R+ L+ + +     +   
Sbjct: 130 GRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV-LEALHAKGSTLDTGN 188

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD--- 391
              +I+  C +  ++    +L ++   G   +  +Y +++ G C    +    +LMD   
Sbjct: 189 CNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMV 248

Query: 392 -------LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
                   M + GCTP+I  Y  IIDG+CK+G  + A E+L +     L+ + + Y  +L
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                    ++A  L   M +     D   +  L+  FC+   +    +  ++ +  G  
Sbjct: 309 KGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 368

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TYT++I G+ ++G I  AV   + M   GC P+ I+Y  ++ GLC   +  +A + 
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
              MI +G  P  VT                                 NT+I  LC +  
Sbjct: 429 MSRMIQQGCLPNPVT--------------------------------FNTIINFLCKKGL 456

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           V  A     ++L    N D +S + + +   ++ K
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGK 491



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 54/349 (15%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVI 177
           +R+Y      +   G+ E A+E++  M S                     R ++   ++ 
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM     PL   T N +V   C+ GLV+   E+ ++M   G   D  +Y  ++  +C+ G
Sbjct: 326 EMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 385

Query: 238 RVTEA-----------------------------DRWLSA------MLDRGAILDNATLT 262
            + EA                             +RW+ A      M+ +G + +  T  
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   C KG    ++QA ELL++M+  G  P++ +++ +IDGL K G TE+A  L L +
Sbjct: 446 TIINFLCKKGL---VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALEL-LNV 501

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PNV TY++M     +E ++++   + + +++  +  +   Y ++I   CK   
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE 561

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            + A D +  M   GC PN   Y A+I GL  +G + EA +LL +   R
Sbjct: 562 TDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 4/412 (0%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++  ++ A  V D M ++    D  +Y +M+ + C  G++  A + L+ +L 
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
                   T T+LI A       G + +A +L++EM+ +G KP+++T+  +I G+CK+G 
Sbjct: 222 DNCQPTVITYTILIEA---TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++AF +   L      +P+V +Y  ++     + K    E L+ +M  +   PN  TY+
Sbjct: 279 VDRAFEMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C+ G  E A +L+ LM ++G TP+ Y+Y+ +I   C++GR+  A E L+     
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + Y  +L+   K  +  QAL +F ++ + G +P+  +Y T+ +A         +
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
                E ++ G+ P + TY SMI    R+G +  A +    M      P  +TY  ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            CK  ++++A    ESM+G G  P E T   L       G  A AM +   L
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 234/476 (49%), Gaps = 12/476 (2%)

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           +C  G    +  + + M  +G   D      ++  +  +  + +A R +  +L++    D
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPD 157

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                 LI  FC       I  A  +L+ M  K + P+  T+ ++I  LC +G  + A +
Sbjct: 158 VFAYNALINGFCKMN---RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +  +L+ SDN +P V TYT +I     E  ++ A  L++ M  +GL P+  TY ++I G 
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  +RA++++  +  +GC P++ +YN ++  L  +G+ +E  +L+ K F  +   + 
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY+IL++   +  + ++A+ L   M + GL PD ++Y  LIAAFCR+ ++  + +F + 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I+ G  P    Y +++    ++G    A++ F ++ ++GC+P++ +Y  + S L     
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNT 614
              A      M+  GI P E+T  ++    C++G  D A  +++ + S +    + T N 
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 615 LIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAALKNACYESNKYALFSDL 666
           ++   C   R+  A      ++G     ++    V +  +  A Y +    L +DL
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 153/316 (48%), Gaps = 4/316 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G + E   ++ EM + GL     T N ++   C+ G+V+ A E+   +  +G   D  SY
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ A    G+  E ++ ++ M       +  T ++LIT  C     G I++A  LL+ 
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD---GKIEEAMNLLKL 358

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  KG  P+ Y++  LI   C++G  + A   FL+ + SD   P++  Y  +++  CK  
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FLETMISDGCLPDIVNYNTVLATLCKNG 417

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K ++A  +  ++ E G  PN+++Y ++       G+  RA  ++  M   G  P+   YN
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           ++I  LC++G V EA+ELL      E     +TY I+L    K    + A+ +   MV  
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537

Query: 467 GLNPDIHAYTTLIAAF 482
           G  P+   YT LI   
Sbjct: 538 GCRPNETTYTVLIEGI 553



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 37/301 (12%)

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEG-------CT-------------------------- 399
           + +  C+ GN+  +  L++ M ++G       CT                          
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 400 -PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++AYNA+I+G CK  R+ +A  +L +   ++   D +TY I++     + +   AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++     P +  YT LI A   +  + E+ K   E ++ GL P   TY ++I G  
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A +  + +   GC PD I+Y  L+  L  Q K +E  +    M  +   P  V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L    C+ G    AM +L+ + +K       + + LI   C E R+ +A  F   +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 636 L 636
           +
Sbjct: 395 I 395



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 4/258 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ +EG  ++ +M +        T + ++   C  G +E A  +   M  +G+  DA SY
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ A+CR GR+  A  +L  M+  G + D      ++   C     G   QA E+  +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN---GKADQALEIFGK 428

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  ++  +   L   G   +A  + L+++ S+   P+  TY +MIS  C+E 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM-SNGIDPDEITYNSMISCLCREG 487

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++ A  LL  M+     P+  TY  ++ G CK    E A ++++ M   GC PN   Y 
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 407 AIIDGLCKKGRVQEAYEL 424
            +I+G+   G   EA EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 49/239 (20%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +  T+L  +G  E A  +++ M               +++F   GRL      +  M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 181 NNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
           ++G LP I +  N V+   C+ G  + A E+F ++   G   ++SSY  M  A    G  
Sbjct: 396 SDGCLPDIVN-YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------FRGS------- 276
             A   +  M+  G   D  T   +I+  C +G                F  S       
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 277 ---------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                    I+ A  +LE MV  G +PN  T+TVLI+G+   G+  +A  L   LVR D
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 145/582 (24%), Positives = 266/582 (45%), Gaps = 62/582 (10%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV 176
            SFF ++I         R Y     S+   GNF  ++E        F  +  L + FS+ 
Sbjct: 16  FSFFAYSIA-------PRHYSTNTRSISVKGNFGVSNE--------FENVKCLDDAFSLF 60

Query: 177 IEMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
            +M     LP + S  ++++     +        +F E+    +        ++V + C 
Sbjct: 61  RQMVRTKPLPSVVS-FSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCL 119

Query: 236 MGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGW-K 293
           M R       L+    +G   +     TLL   F +      +K A  L +++VR+   +
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAE----NKVKDAVHLFKKLVRENICE 175

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           PN   +  +++GLCKKG T+KAF L L+L+   + KPN   Y+ +I  +CK+  ++ A  
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDL-LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATS 234

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL  MK++ + P+  TY++LI   CK+  +E    L   M      PN+  +N++IDGLC
Sbjct: 235 LLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLC 294

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K+G+V++A E+++   ++ +  D ITY +++  +  + +  +A  +F  M+   + P+I 
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNII 354

Query: 474 AYTTLIAAFCRQKKMKE-----------------------------------SEKFFQEA 498
           +Y  LI  + RQKK+ E                                   ++ FF E 
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           ++AG  P   T+ +++ GY ++G +  A+ +F ++ +     +   Y A+I GLCK  KL
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTL 615
           D+A   +E +   G+ P  +T   +   YC++G    A  +L  ++    +   RT N +
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           +R      +V     F  ++ GK  + +  ++  L +   E 
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 229/486 (47%), Gaps = 46/486 (9%)

Query: 152 AHE-VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEE 209
            HE ++  +V+S   + R   GFS++      G+P      N ++ G+  E   V+ A  
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAE-NKVKDAVH 163

Query: 210 VFDEMCARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITA 267
           +F ++    +C  +   Y  ++   C+ G   +A   L  M ++G+   N  + +++I A
Sbjct: 164 LFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM-EQGSTKPNTCIYSIVIDA 222

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FC  G    +  A  LL EM +K   P+++T++ LID LCK    E    LFL+++  + 
Sbjct: 223 FCKDGM---LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y PNV T+ ++I G CKE K+  AE ++  M E+G+ P+  TY  +I G+   G  +RA 
Sbjct: 280 Y-PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAR 338

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           ++ D M  +   PNI +YN +I+G  ++ ++ EA ++ ++  Q+ L+   +T  +LL   
Sbjct: 339 EIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398

Query: 448 LKQAETKQALGLFCRMVKAGLNPD-----------------------------------I 472
            +   TK A   F  M+ AG  PD                                   I
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YT +I   C+  K+ ++   F++    GL P   TYT+MI GY ++G +  A    ++
Sbjct: 459 QIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC  DN TY  ++ G  + +K+ E   F E + GK  S  E   V L  +   +  
Sbjct: 519 MEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS-FEAATVELLMDIIAEDP 577

Query: 593 SATAMI 598
           S   MI
Sbjct: 578 SLLNMI 583


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 4/437 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ SF E G L +   +   M + GL L +ST N ++   C+ G  + AE +  EM
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            + G   +  S+  ++   C       A R++  ML R        LT LI+  C     
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK---H 496

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A EL  + + KG+  +  T   L+ GLC+ G  ++AFR+  +++        V +
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-S 555

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +ISG C ++K++ A M L+ M ++GL P+  TY+ LI G   +   E A    D   
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 615

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P++Y Y+ +IDG CK  R +E  E   +   + +Q + + Y  L+  + +     
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M   G++P+   YT+LI       +++E++  F+E    GL P    YT++I
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY + G +       + M+     P+ ITY  +I G  +   + EA +    M  KGI 
Sbjct: 736 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795

Query: 575 PCEVTRVTLAYEYCKQG 591
           P  +T     Y Y KQG
Sbjct: 796 PDSITYKEFIYGYLKQG 812



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 219/484 (45%), Gaps = 43/484 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCA 216
           +++F + G+++E   +  +M   G+     T N V+     LG+    +E F   ++M  
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVE 336

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+     +Y ++V    R  R+ +A   L  M  +G   +      LI +F + G   S
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---S 393

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------ 318
           + +A E+ + MV KG      T+  LI G CK G  + A RL                  
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453

Query: 319 ----------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                           F+  +   N  P     T +ISG CK  K ++A  L  +   +G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            + +T T  +L++G C+ G  + A+ +   +   GC  +  +YN +I G C K ++ EA+
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             L +  +R L+ D  TY+IL+       + ++A+  +    + G+ PD++ Y+ +I   
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+ ++ +E ++FF E ++  + P    Y  +I  Y R G +S A++  + M   G +P++
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY +LI G+   S+++EA   +E M  +G+ P       L   Y K G       +L  
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753

Query: 603 LDKK 606
           +  K
Sbjct: 754 MHSK 757



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V       R+ + + ++ EMT  G P      N ++    E G +  A E+ D M ++G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   +S+Y  ++  YC+ G+   A+R L  ML  G  ++  + T +I   C      S  
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-- 466

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   + EM+ +   P     T LI GLCK G   KA  L+ + + +  +  +  T  A+
Sbjct: 467 -ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNAL 524

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  K++ A  + + +  +G + +  +Y +LI G C     + A+  +D M K G 
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+ +I GL    +V+EA +      +  +  D  TY++++    K   T++   
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M+   + P+   Y  LI A+CR  ++  + +  ++    G+ P   TYTS+I G  
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A   F+ M   G  P+   Y ALI G  K  ++ +       M  K + P ++
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +   Y + G+   A  +L  + +K
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREK 792



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 14/361 (3%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L  ++   C+ G    A E++ +   +G   D  +   ++   C  G++ EA R    +L
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG ++D  +   LI+  C K     + +AF  L+EMV++G KP+ YT+++LI GL    
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 602

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             E+A + F    + +   P+V+TY+ MI G CK E+    +   + M  + + PNT  Y
Sbjct: 603 KVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI  +C+ G    A +L + M  +G +PN   Y ++I G+    RV+EA  L ++   
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L+ +   YT L+  + K  +  +   L   M    ++P+   YT +I  + R   + E
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +   E    G+ P   TY   I GYL+ G +  A K            D   Y A+I 
Sbjct: 782 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIE 831

Query: 551 G 551
           G
Sbjct: 832 G 832



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 193/431 (44%), Gaps = 11/431 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  RV  AD   S  L     +      LLI  +C +  R     A ++   +  KG  P
Sbjct: 178 RDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFP 237

Query: 295 NVYTHTVLIDGLCKKGWTEK---AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  T  +L+  L +    +K   AF +  K V      P+V+ +T  I+ +CK  K+  A
Sbjct: 238 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGV-----SPDVYLFTTAINAFCKGGKVEEA 292

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L  +M+E G+ PN  T+ ++I G    G ++ A+   + M + G  P +  Y+ ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L +  R+ +AY +LK+  ++    + I Y  L+   ++     +A+ +   MV  GL+  
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y TLI  +C+  +   +E+  +E ++ G    + ++TS+IC         SA+++  
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M     +P       LISGLCK  K  +A + +   + KG      T   L +  C+ G
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532

Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
               A  I + +  +  +    + NTLI   C +K++  A +F  +++ +    D  + +
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592

Query: 649 ALKNACYESNK 659
            L    +  NK
Sbjct: 593 ILICGLFNMNK 603


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 220/477 (46%), Gaps = 44/477 (9%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +   E +   M       +A +Y +++ A C  GR ++A  W + M++RG     
Sbjct: 67  CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 126

Query: 259 ATLTLLITAFCDKG--------FRG------------------------SIKQAFELLEE 286
            T   +I AFC +G        F G                         I QA  L EE
Sbjct: 127 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 186

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +KG  P+  T  +L+ G  K G  E   RL LK +      P+   +   +SG C   
Sbjct: 187 MRKKGIAPDGITFNILVSGHYKYGREEDGDRL-LKDISVLGLLPDRSLFDISVSGLCWAG 245

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A   L  M E+GL P+   + S+I  + + G  ++A++   LM   G TP+    +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +++ GL   GR+QEA EL+ +  ++ L  + + +T+LL +  K+ +   A  L+  M + 
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+ A++  I    +Q  ++E+   F E +  GL P    Y S+ICG+ + G ++ A
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +K  + M   G  PD  T   +I GLCKQ ++  A   +  M   G+SP  +T  TL   
Sbjct: 426 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 485

Query: 587 YCKQGDSATAMIILESLDKKLW-------IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           YCK  D   A    ++L  +++       + T N  I   CS +R+  A L   +L+
Sbjct: 486 YCKAFDMVNA----DNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 178/370 (48%), Gaps = 4/370 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +++EM  +G+  D  ++ ++V  + + GR  + DR L  +   G + D +   +
Sbjct: 177 IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDI 236

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            ++  C   + G + +A E L +M+ KG  P++     +I    + G  +KAF  + KL+
Sbjct: 237 SVSGLC---WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY-KLM 292

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                 P+  T ++++ G     ++  A  L+ +M E+GL  N   +T L+    K G+ 
Sbjct: 293 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 352

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  L   M + G  P++ A++A IDGL K+G V+EAY +  +  ++ L  +   Y  L
Sbjct: 353 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K  +  +AL L   M   GL PDI     +I   C+Q +M+ +   F +    GL
Sbjct: 413 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 472

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY ++I GY +  ++ +A     RM   G  PD  TY   I G C   +++ A  
Sbjct: 473 SPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVL 532

Query: 564 FYESMIGKGI 573
             + ++  GI
Sbjct: 533 MLDELVSAGI 542



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 1/332 (0%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G     ++L ++++R+G +P  YT + +I G C+KG       L L L+   + +PN   
Sbjct: 35  GDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESL-LHLMPKFHCEPNAFA 93

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+  C   + + A      M E+G  P   T+ ++I   CK GN   A  L D + 
Sbjct: 94  YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 153

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G +PN   YN +++G  K   + +A  L ++  ++ +  D IT+ IL+S H K    +
Sbjct: 154 EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 213

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
               L   +   GL PD   +   ++  C   ++ E+ +F  + +  GL P+   + S+I
Sbjct: 214 DGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 273

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G    A + ++ M   G  P   T  +L+ GL    +L EA +    MI KG+S
Sbjct: 274 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLS 333

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
              +    L  ++ K+GD   A  +   ++++
Sbjct: 334 VNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 143/301 (47%), Gaps = 1/301 (0%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA E+L  M   G +P+     +L   L + G     ++LF  ++R    +P  +T++ +
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGP-QPCKYTFSGI 62

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C++  ++  E LL  M +    PN   Y  +I   C  G    A    +LM + GC
Sbjct: 63  ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  +N +I+  CK+G V EA +L     +     + I Y  L++ ++K  E  QA  
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M K G+ PD   +  L++   +  + ++ ++  ++    GL P +  +   + G  
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A+++   M + G +P  I + ++I+   +    D+A + Y+ M+  G++P   
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 579 T 579
           T
Sbjct: 303 T 303



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 39/326 (11%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           VS     GRL E    +++M   GL       N V+    + GL + A E +  M   G+
Sbjct: 238 VSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGL 297

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
               S+   +++     GR+ EA   +  M+++G  ++N   T+L+  F     RG +  
Sbjct: 298 TPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK---RGDVVG 354

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L  EM R+G  P+V   +  IDGL K+G  E+A+ +FL+++R     PN   Y ++I
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK-GLIPNNFAYNSLI 413

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPN---TN---------------------------- 368
            G+CK  K+N A  L + M+ +GLLP+   TN                            
Sbjct: 414 CGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 473

Query: 369 ----TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
               TY +LI G+CK  +   A +L++ M   G  P++  YN  I G C   R+  A  +
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLM 533

Query: 425 LKKAFQRELQADKITYTILLSEHLKQ 450
           L +     + +        L+ H K 
Sbjct: 534 LDELVSAGILSFSFACPPTLNAHTKH 559



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 46/292 (15%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L RM+E G+ P+ +    L     +VG++   + L   + + G  P  Y ++ II G C
Sbjct: 8   ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 67

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           +KG +     LL                     HL              M K    P+  
Sbjct: 68  RKGCIHLGESLL---------------------HL--------------MPKFHCEPNAF 92

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           AY  +I A C + +  ++  +F   I  G  PT  T+ ++I  + ++GN+  A K F  +
Sbjct: 93  AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 152

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT---RVTLAYEYCKQ 590
            ++G +P+ I Y  L++G  K  ++D+A   YE M  KGI+P  +T    V+  Y+Y ++
Sbjct: 153 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 212

Query: 591 GDSATAMIILESL----DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            D    +  +  L    D+ L+    +  +  LC   R+  A  F   +L K
Sbjct: 213 EDGDRLLKDISVLGLLPDRSLF----DISVSGLCWAGRLDEAMEFLMDMLEK 260



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 7/220 (3%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           QAL +  RM + G+ P       L     R        K F++ I  G  P K T++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ R G I         M +  C P+   Y  +I+  C + +  +A  ++  MI +G +
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P  VT  T+   +CK+G+   A  + + L +  +       NTL+      + +  A + 
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 632 FHKLLGKDQNVDRVSLAALKNACY----ESNKYALFSDLS 667
           + ++  K    D ++   L +  Y    E +   L  D+S
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 220/477 (46%), Gaps = 44/477 (9%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G +   E +   M       +A +Y +++ A C  GR ++A  W + M++RG     
Sbjct: 277 CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 336

Query: 259 ATLTLLITAFCDKG--------FRG------------------------SIKQAFELLEE 286
            T   +I AFC +G        F G                         I QA  L EE
Sbjct: 337 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 396

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +KG  P+  T  +L+ G  K G  E   RL LK +      P+   +   +SG C   
Sbjct: 397 MRKKGIAPDGITFNILVSGHYKYGREEDGDRL-LKDISVLGLLPDRSLFDISVSGLCWAG 455

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A   L  M E+GL P+   + S+I  + + G  ++A++   LM   G TP+    +
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +++ GL   GR+QEA EL+ +  ++ L  + + +T+LL +  K+ +   A  L+  M + 
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+ A++  I    +Q  ++E+   F E +  GL P    Y S+ICG+ + G ++ A
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +K  + M   G  PD  T   +I GLCKQ ++  A   +  M   G+SP  +T  TL   
Sbjct: 636 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 695

Query: 587 YCKQGDSATAMIILESLDKKLW-------IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           YCK  D   A    ++L  +++       + T N  I   CS +R+  A L   +L+
Sbjct: 696 YCKAFDMVNA----DNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 748



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 203/435 (46%), Gaps = 8/435 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +++EM  +G+  D  ++ ++V  + + GR  + DR L  +   G + D +   +
Sbjct: 387 IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDI 446

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            ++  C   + G + +A E L +M+ KG  P++     +I    + G  +KAF  + KL+
Sbjct: 447 SVSGLC---WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY-KLM 502

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                 P+  T ++++ G     ++  A  L+ +M E+GL  N   +T L+    K G+ 
Sbjct: 503 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 562

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A  L   M + G  P++ A++A IDGL K+G V+EAY +  +  ++ L  +   Y  L
Sbjct: 563 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 622

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K  +  +AL L   M   GL PDI     +I   C+Q +M+ +   F +    GL
Sbjct: 623 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 682

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   TY ++I GY +  ++ +A     RM   G  PD  TY   I G C   +++ A  
Sbjct: 683 SPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVL 742

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLC 620
             + ++  GI P  VT  ++    C       AMI+   L K  ++    T N L+ +  
Sbjct: 743 MLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFY 801

Query: 621 SEKRVGMAALFFHKL 635
            +       ++ HKL
Sbjct: 802 KQGMPERTLMWGHKL 816



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 188/397 (47%), Gaps = 5/397 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +VS   + GR ++G  ++ +++  GL    S  +  V   C  G ++ A E   +M  +G
Sbjct: 412 LVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG 471

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     ++  ++ AY + G   +A      M+  G     +T + L+         G ++
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL---SINGRLQ 528

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ +M+ KG   N    TVL+D   K+G    A  L+ ++ R   + P+V  ++A 
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF-PDVVAFSAF 587

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K+  +  A  +   M  +GL+PN   Y SLI G CK G    A  L  +M   G 
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I+  N II GLCK+GR++ A  +     Q  L  D ITY  L++ + K  +   A  
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  RM  +G NPD+  Y   I  FC  ++M  +     E ++AG+ P   TY SM+ G  
Sbjct: 708 LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC 767

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            D  +  A+    R+ ++   P+ +T   L+S   KQ
Sbjct: 768 SD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 1/332 (0%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G     ++L ++++R+G +P  YT + +I G C+KG       L L L+   + +PN   
Sbjct: 245 GDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESL-LHLMPKFHCEPNAFA 303

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+  C   + + A      M E+G  P   T+ ++I   CK GN   A  L D + 
Sbjct: 304 YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 363

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G +PN   YN +++G  K   + +A  L ++  ++ +  D IT+ IL+S H K    +
Sbjct: 364 EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 423

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
               L   +   GL PD   +   ++  C   ++ E+ +F  + +  GL P+   + S+I
Sbjct: 424 DGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 483

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G    A + ++ M   G  P   T  +L+ GL    +L EA +    MI KG+S
Sbjct: 484 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLS 543

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
              +    L  ++ K+GD   A  +   ++++
Sbjct: 544 VNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 153/325 (47%), Gaps = 8/325 (2%)

Query: 257 DNATLTLLITAFCDK--GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
           D + L  L+ AF +   GF     QA E+L  M   G +P+     +L   L + G    
Sbjct: 195 DFSVLDSLMRAFVNAEMGF-----QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGN 249

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
            ++LF  ++R    +P  +T++ +I G+C++  ++  E LL  M +    PN   Y  +I
Sbjct: 250 VWKLFKDVIRR-GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVI 308

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              C  G    A    +LM + GC P +  +N +I+  CK+G V EA +L     +    
Sbjct: 309 NACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFS 368

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            + I Y  L++ ++K  E  QA  L+  M K G+ PD   +  L++   +  + ++ ++ 
Sbjct: 369 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRL 428

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            ++    GL P +  +   + G    G +  A+++   M + G +P  I + ++I+   +
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 488

Query: 555 QSKLDEACQFYESMIGKGISPCEVT 579
               D+A + Y+ M+  G++P   T
Sbjct: 489 AGLEDKAFEAYKLMVHFGLTPSPST 513



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 51/365 (13%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GRL+E   ++ +M   GL +       ++    + G V  A+ ++ EM  RG+  D  ++
Sbjct: 525 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF 584

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
              +    + G V EA      ML +G I +N     LI  FC  G    + +A +L + 
Sbjct: 585 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG---KLNEALKLEKV 641

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G  P+++T  ++I GLCK+G    A  +F+ + ++    P++ TY  +I+GYCK  
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT-GLSPDIITYNTLINGYCKAF 700

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M  A+ L+ RM   G  P+  TY   I+G C      RA  ++D +   G  PN   YN
Sbjct: 701 DMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYN 760

Query: 407 AIIDGLC----KKGRVQEAYELLKKAF--------------------QRELQA------- 435
           ++++G+C     +  +  A  LLK AF                    +R L         
Sbjct: 761 SMLNGVCSDILDRAMILTA-RLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEI 819

Query: 436 ----DKITYTILLSEH--LKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKM 488
               D+ITY I+   H  L+ A+       F R+  A  L  D   Y T    FCR +  
Sbjct: 820 PYAFDEITYKIMDKAHHILEDAD-------FSRVTSAKSLFLDFLMYITY-DYFCRYRPH 871

Query: 489 KESEK 493
            E+ +
Sbjct: 872 SETTQ 876



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 35/299 (11%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y+ +     +++  +   E   +A  +L RM+E G+ P+ +    L     +VG++   +
Sbjct: 192 YESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVW 251

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L   + + G  P  Y ++ II G C+KG +     LL    +   + +   Y I+++  
Sbjct: 252 KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 311

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             +  T  AL  F  M++ G NP +  + T+I AFC++  + E+ K F      G  P  
Sbjct: 312 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL------------------- 548
             Y +++ GY++   I  A   ++ M + G APD IT+  L                   
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 431

Query: 549 ----------------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
                           +SGLC   +LDEA +F   M+ KG+SP  +   ++   Y + G
Sbjct: 432 ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAG 490



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 7/220 (3%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           QAL +  RM + G+ P       L     R        K F++ I  G  P K T++ +I
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G+ R G I         M +  C P+   Y  +I+  C + +  +A  ++  MI +G +
Sbjct: 274 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 333

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALF 631
           P  VT  T+   +CK+G+   A  + + L +  +       NTL+      + +  A + 
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393

Query: 632 FHKLLGKDQNVDRVSLAALKNACY----ESNKYALFSDLS 667
           + ++  K    D ++   L +  Y    E +   L  D+S
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 227/485 (46%), Gaps = 43/485 (8%)

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEM---CARGVCADASSYKLMVVAYCRMGRVTEAD 243
           + + ++RV G        E    +F+ M   C   V  D  +Y +++  +CRMGR+    
Sbjct: 55  LLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGF 114

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCD-------------------------------KG 272
                +L  G  ++N  +  L+   CD                               KG
Sbjct: 115 ATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKG 174

Query: 273 F--RGSIKQAFELLEEMVR---KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           F      ++A ELL  M     +   PNV ++ ++I+G   +G  +KA+ LFL+++    
Sbjct: 175 FCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM-DRG 233

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            +PNV TYT +I G CK + ++RAE + ++M ++G+ P+ +TY  LI+G+  +G ++   
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVV 293

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            +++ M   G  P+ Y Y ++++ LC  GR +EA  L     ++ ++ +   Y IL+  +
Sbjct: 294 RMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGY 353

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             +    +   L   MV+ GL+PD H +  +  A+ ++  + E+   F +    GL P  
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y ++I    + G +  AV  F +M   G AP+   + +L+ GLC   K ++A +FY  
Sbjct: 414 VNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATA---MIILESLDKKLWIRTVNTLIRKLCSEKR 624
           M+ +GI P  V   T+    C +G    A   + ++E +  +  + +  TLI   C   R
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533

Query: 625 VGMAA 629
           +  AA
Sbjct: 534 IDEAA 538



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 249/558 (44%), Gaps = 52/558 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG-LVEYAEEVFDEMCAR 217
           ++  F  +GRL+ GF+    +  +G  +    +N+++   C+   L E  + +   M   
Sbjct: 100 LIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPEL 159

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD---RGAILDNATLTLLITAFCDKGFR 274
           G   D  SY  ++  +C   R  EA   L  M D   R    +  +  ++I  F  +   
Sbjct: 160 GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTE--- 216

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A+ L  EM+ +G +PNV T+T +IDGLCK    ++A  +F +++     KP+  T
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVKPDNDT 275

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GY    K      +LE M   GL P+  TY SL+   C  G    A  L D M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  PN+  Y  +I G   KG + E ++LL    +  L  D   + I+ + + K+A   
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------------------------ 484
           +A+ +F +M + GL+PD+  Y  LI A C+                              
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 485 -----QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
                  K +++++F+ E +  G+ P    + +++C     G +  A +    M ++G  
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P  I+Y  LI G C   ++DEA +  + M+  G+ P E T  TL + YC+ G    A  +
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQN--VDRVSLAAL-K 651
              + +      + T +T++  L + +R   A   +  ++  GK  N  +  + L  L K
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635

Query: 652 NACYESNKYALFSDLSQR 669
           N C +   + LF  L  +
Sbjct: 636 NNCVDE-AFKLFQSLCSK 652



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 233/501 (46%), Gaps = 7/501 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           ++   C++  +  IG+ KE   M+ EM+ +GL     T   ++   C  G    A  +FD
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M  +G+  + + Y +++  Y   G ++E    L+ M++ G   D+    ++ TA+  K 
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I +A  +  +M ++G  P+V  +  LID LCK G  + A   F +++ ++   PN+
Sbjct: 393 M---IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM-NEGVAPNI 448

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             + +++ G C  +K  +A+     M  QG+ P+   + +++   C  G   +A  L+DL
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P + +Y  +I G C  GR+ EA + L       L+ D+ TY  LL  + +   
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A G+F  M++ G+ P +  Y+T++      ++  E+++ +   IT+G       Y  
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G  ++  +  A K FQ +       +  T+  +I  L K  + ++A   + ++   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAA 629
           + P   T   +A    ++G       +  +++K       R +N L+R+L     +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
            +  KL  K+ +++  + A L
Sbjct: 749 AYLCKLDEKNFSLEASTTAML 769



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 189/413 (45%), Gaps = 5/413 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H +   + +++A+   + E   +  +M   GL         ++   C+LG
Sbjct: 369 MVENG-LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   GV  +   +  +V   C + +  +A  +   ML++G   D     
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++   C KG    + +A  L++ M R G +P V ++T LI G C  G  ++A +  L +
Sbjct: 488 TILCNLCTKG---QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAK-SLDV 543

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S   KP+  TY  ++ GYC+  +++ A  +   M   G+ P   TY+++++G      
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M   G   NI+ YN I++GL K   V EA++L +    ++ Q +  T+ I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K    + A+ LF  +   GL PD+  Y  +      +  ++E +  F     +G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
             P      +++   L  G+I+ A  Y  ++++   + +  T   LIS L + 
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRD 776


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 210/442 (47%), Gaps = 9/442 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++ SF + GR  +   ++ EM   G   LP   +    + G+A +  L E AE V     
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL 302

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ++   A + +Y  ++      G V +AD     M + G +    T   +I      G   
Sbjct: 303 SKK--ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSG--- 357

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A     EM   G +P+V T+  L++G CK G  ++A  LF  L R     P V TY
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL-RHAGLAPTVLTY 416

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I GYC+   +  A  L E M EQG LP+  TYT L+ G     +   A +  D M  
Sbjct: 417 NILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLS 476

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+ +AYN  I      G + +A+ L +      + +D +TY IL+    K      
Sbjct: 477 KGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLND 536

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L  +MV  GL PD   YT LI A C +  ++E+ KFF++ I+ GL P+  TYT  I 
Sbjct: 537 AKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIH 596

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y R GN+ SA  +F++M + G  P+ ITY  LI  LC+  +   A + +  M+ +G+ P
Sbjct: 597 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVP 656

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
            + T   L    CK+G+   AM
Sbjct: 657 NKYTYTLLIDGNCKEGNWEDAM 678



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 208/446 (46%), Gaps = 25/446 (5%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
           V  T L   G+ E A E+++ M        RL +  S     T N  PLIT  L +    
Sbjct: 279 VVITGLARKGDLEEAAEMVEGM--------RLSKKAS---SFTYN--PLITGLLAK---- 321

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
               G V+ A+++  EM   G+     +Y  M+    + G+V  A      M   G   D
Sbjct: 322 ----GFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T   L+  +C  G   S+K+A  L  ++   G  P V T+ +LIDG C+ G  E+A R
Sbjct: 378 VITYNSLLNGYCKAG---SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARR 434

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  ++V      P+V TYT ++ G      +  A    + M  +GL P+   Y + I   
Sbjct: 435 LKEEMVEQ-GCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAE 493

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
             +G   +A+ L ++M  EG + +   YN +IDGLCK G + +A +L  K     LQ D 
Sbjct: 494 LTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDC 553

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITYT L+  H ++   ++A   F  M+  GL P    YT  I A+CR+  +  +  +F++
Sbjct: 554 ITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRK 613

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  G+ P + TY  +I    R G    A ++F  M + G  P+  TY  LI G CK+  
Sbjct: 614 MLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGN 673

Query: 558 LDEACQFYESMIGKGISPCEVTRVTL 583
            ++A +FY  M   GI P  +T   L
Sbjct: 674 WEDAMRFYFEMHQNGIHPDYLTHKAL 699



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 234/489 (47%), Gaps = 15/489 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM ++G+       NRV+ +  +    +    V  EM   G+     +Y  ++ ++ + G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 238 RVTEADRWLSAMLDRGA--ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           R  +    L  M  RG+  + ++ T  ++IT    KG    +++A E++E M R   K +
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKG---DLEEAAEMVEGM-RLSKKAS 307

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            +T+  LI GL  KG+ +KA  L L++  ++   P V TY AMI G  +  ++  A++  
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEM-ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+  GL P+  TY SL+ G+CK G+ + A  L   +   G  P +  YN +IDG C+ 
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G ++EA  L ++  ++    D  TYTIL+           A   F  M+  GL PD  AY
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            T I A      + ++ +  +  +  G+     TY  +I G  + GN++ A     +M  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G  PD ITY  LI   C++  L EA +F++ MI  G++P  VT     + YC++G+  +
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 596 AM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           A      ++ E ++      T N LI  LC   R  +A   FH++L +    ++ +   L
Sbjct: 607 AYGWFRKMLEEGVEPNEI--TYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLL 664

Query: 651 KNA-CYESN 658
            +  C E N
Sbjct: 665 IDGNCKEGN 673


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 253/585 (43%), Gaps = 39/585 (6%)

Query: 51  TSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSP----------PRLNLQIDIDSLTHEQA 100
           TS+S  PP+ +   V    + S   Q  L+ SP             N++ ++D+  H   
Sbjct: 45  TSNSLPPPEWIDPFVDLSDVASRTHQ-DLKPSPWVNQILALLDGSSNMESNLDTFCHMFL 103

Query: 101 ITVVASLAN--------EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
           I +  S  +        +    VA+ FF WA    K+ H +  Y+     L +NG  +  
Sbjct: 104 IKLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSV 163

Query: 153 HEVM---------------QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
             V                  ++ SF  +G ++E   +   M  NG+     + N +V  
Sbjct: 164 KSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNG 223

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
                 +E AE VF+ M    +  D  +Y  M+  YC +G+  +A   L AM  R    D
Sbjct: 224 LVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPD 283

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T   LI A C     G       L  EM  KG +   + ++++I GLCK G   + + 
Sbjct: 284 KITYMTLIQA-CYA--EGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYT 340

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +F  ++ S   K NV  YTA+I    K   M  A +L +RMK++GL P+  TY  ++   
Sbjct: 341 VFENMI-SKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSL 399

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CK G  + A + M+    +G   N   Y+++IDGL K GRV EA  +  +  ++    D 
Sbjct: 400 CKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDS 459

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
             Y  L+    K  +  +AL L  RM   G +  ++ YT LI    R+ + +E+   +  
Sbjct: 460 YCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDL 519

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I  G+ PT   + ++  G    G ++ A K    M  +G  P+   +  +I+ LCK  +
Sbjct: 520 MIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGR 578

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           + EAC+  + ++ +G       R  L     K G++  A+ ++ S
Sbjct: 579 IKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRS 623



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 203/467 (43%), Gaps = 42/467 (8%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            S   + G I+   +   LI +F   G  G +++   +   M   G +P+++++  L++G
Sbjct: 167 FSKFKEMGLIMTVYSSNSLIKSF---GNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNG 223

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L    + E A R+F +++ +    P+V TY  MI GYC+  K  +A   L+ M+ + + P
Sbjct: 224 LVNSKFIESAERVF-EVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAP 282

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY +LI      G+F+    L   M ++G     + Y+ +I GLCK G+  E Y + 
Sbjct: 283 DKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVF 342

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +    +  +A+   YT L+  + K     +A+ LF RM K GL PD   Y  ++ + C+ 
Sbjct: 343 ENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKS 402

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++ E+ ++ +     G+      Y+S+I G  + G +  A + F  M + GC PD+  Y
Sbjct: 403 GRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCY 462

Query: 546 GALISGLCKQSKLDEA-----------CQ------------------------FYESMIG 570
            ALI  L K  K+DEA           C                          ++ MI 
Sbjct: 463 NALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMID 522

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI--RTVNTLIRKLCSEKRVGMA 628
           KGI+P       L+   C  G  A A  IL+ +     I     + +I  LC   R+  A
Sbjct: 523 KGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAGRIKEA 582

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
                 ++ + + +       L NA  ++    L   L  R   GIG
Sbjct: 583 CKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKL-MRSKIGIG 628



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 142/364 (39%), Gaps = 59/364 (16%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A R F    +   Y  N+  Y ++I        ++  + +  + KE GL+    +  SLI
Sbjct: 127 AIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLI 186

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
                +G  E    +   M + G  P++++YN +++GL                      
Sbjct: 187 KSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVN-------------------- 226

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                     S+ ++ AE      +F  M    + PD+  Y T+I  +C   K +++ + 
Sbjct: 227 ----------SKFIESAER-----VFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEK 271

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            +      + P K TY ++I     +G+  S +  +  M++ G       Y  +I GLCK
Sbjct: 272 LKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCK 331

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-------DKKL 607
             K  E    +E+MI KG          L     K G+   AM++ + +       D+  
Sbjct: 332 DGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVT 391

Query: 608 WIRTVNTLIR-----------KLCSEKRVGMAALFFHKL---LGKDQNVD---RVSLAAL 650
           +   VN+L +           + CS K V + A+F+  L   LGK   VD   R+    +
Sbjct: 392 YGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMV 451

Query: 651 KNAC 654
           K  C
Sbjct: 452 KKGC 455


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 211/417 (50%), Gaps = 7/417 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  +++ A   L  M+  G      TL+ L+  +C  
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC-H 167

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I  A  L+++MV  G++P+  T T LI GL       +A  L  ++V+    +PN
Sbjct: 168 GKR--ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPN 224

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY  +++G CK   ++ A  LL +M+   +  N   Y+++I   CK  + + A +L  
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  Y+++I  LC   R  +A  LL    +R++  + +T+  L+   +K+ 
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  L+  M+K  ++PDI  Y++LI  FC   ++ E++  F+  I+   FP   TY 
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   I   V+ F+ M+Q G   + +TY  LI G  +    D A   ++ M+  
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
           G+ P  +T  TL    CK G    AM++ E L +   +  I T N +I  +C   +V
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 6/428 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E +   +  +++ +    R+ +  ++V +M   G    T T   ++           A 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITA 267
            + D M  RG   +  +Y ++V   C+ G +  A   L+ M +   I  N  + + +I +
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDS 269

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C   +R     A  L  EM  KG +PNV T++ LI  LC       A RL   ++    
Sbjct: 270 LCK--YRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-K 325

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             PNV T+ A+I  + KE K+  AE L + M ++ + P+  TY+SLI G C     + A 
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            + +LM  + C PN+  YN +I+G CK  R+ E  EL ++  QR L  + +TYT L+   
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +  +   A  +F +MV  G++P+I  Y TL+   C+  K++++   F+    + + PT 
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY  MI G  + G +      F  ++  G  PD I Y  +ISG C++   +EA   +  
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565

Query: 568 MIGKGISP 575
           M   G  P
Sbjct: 566 MREDGPLP 573



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 39/391 (9%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M R G   N+YT+ +LI+  C++     A  L  K+++   Y+P++ T +++++GY
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGY 165

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C  ++++ A  L+++M E G  P+T T+T+LI+G         A  L+D M + GC PN+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y  +++GLCK+G +  A+ LL K    +++A+ + Y+ ++    K      AL LF  
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285

Query: 463 MVKAGLNPDIHAYTTLIA-----------------------------------AFCRQKK 487
           M   G+ P++  Y++LI+                                   AF ++ K
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+EK + E I   + P   TY+S+I G+     +  A   F+ M    C P+ +TY  
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK- 606
           LI+G CK  ++DE  + +  M  +G+    VT  TL + + +  D   A ++ + +    
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465

Query: 607 --LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               I T NTL+  LC   ++  A + F  L
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 207/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F    ++    +++ +M   G      TL+ ++   C    +  A  + D+M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++       + +EA   +  M+ RG   +  T  +++   C    RG I 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---RGDID 242

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF LL +M     + NV  ++ +ID LCK    + A  LF ++  +   +PNV TY+++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 301

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C  E+ + A  LL  M E+ + PN  T+ +LI    K G    A  L D M K   
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I+ Y+++I+G C   R+ EA  + +    ++   + +TY  L++   K     + + 
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + GL  +   YTTLI  F + +    ++  F++ ++ G+ P   TY +++ G  
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A+  F+ + +    P   TY  +I G+CK  K+++    + S+  KG+ P  +
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 579 TRVTLAYEYCKQG 591
              T+   +C++G
Sbjct: 542 IYNTMISGFCRKG 554



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 185/351 (52%), Gaps = 4/351 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +   F+++ +M    +       + V+   C+    + A  +F EM  +G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++   C   R ++A R LS M++R    +  T   LI AF  +G    + 
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG---KLV 347

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+++   P+++T++ LI+G C     ++A  +F  ++  D + PNV TY  +
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 406

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK ++++    L   M ++GL+ NT TYT+LI+G  +  + + A  +   M  +G 
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  YN ++DGLCK G++++A  + +   + +++    TY I++    K  + +    
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           LFC +   G+ PD+  Y T+I+ FCR+   +E++  F++    G  P   T
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 176/374 (47%), Gaps = 4/374 (1%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  ++V  M   G      T   VV   C+ G ++ A  + ++M A  + A+   Y  ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            + C+     +A    + M ++G   +  T + LI+  C+   R S   A  LL +M+ +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE-RWS--DASRLLSDMIER 324

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              PNV T   LID   K+G   +A +L+ ++++  +  P++ TY+++I+G+C  ++++ 
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDE 383

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ + E M  +   PN  TY +LI G CK    +   +L   M + G   N   Y  +I 
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G  +      A  + K+     +  + +TY  LL    K  + ++A+ +F  + ++ + P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
            I+ Y  +I   C+  K+++    F      G+ P    Y +MI G+ R G    A   F
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563

Query: 531 QRMNQIGCAPDNIT 544
           ++M + G  PD+ T
Sbjct: 564 RKMREDGPLPDSGT 577



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 12/366 (3%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  +V+S    P++  +  ++S   K +K +    L E+M+  G+  N  TY  
Sbjct: 67  DDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  L+  M K G  P+I   +++++G C   R+ +A  L+ +  +  
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D IT+T L+       +  +A+ L  RMV+ G  P++  Y  ++   C++  +  + 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               +   A +      Y+++I    +  +   A+  F  M   G  P+ ITY +LIS L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKL 607
           C   +  +A +    MI + I+P  VT   L   + K+G    A      +I  S+D  +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALF 663
           +  T ++LI   C   R+  A   F  ++ KD   + V+   L N   ++ +      LF
Sbjct: 366 F--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 664 SDLSQR 669
            ++SQR
Sbjct: 424 REMSQR 429



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 42/281 (14%)

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKA------------------------ 466
           R   +    Y  +L   L   +   A+GLF  MVK+                        
Sbjct: 44  RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103

Query: 467 -----------GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
                      G++ +++ Y  LI  FCR+ ++  +     + +  G  P+  T +S++ 
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           GY     IS AV    +M ++G  PD IT+  LI GL   +K  EA    + M+ +G  P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLD-KKLWIRTV--NTLIRKLCSEKRVGMAALFF 632
             VT   +    CK+GD   A  +L  ++  K+    V  +T+I  LC  +    A   F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 633 HKLLGKDQNVDRVSLAALKNAC--YE--SNKYALFSDLSQR 669
            ++  K    + ++ ++L +    YE  S+   L SD+ +R
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 4/437 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ SF E G L +   +   M + GL L +ST N ++   C+ G  + AE +  EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            + G   +  S+  ++   C       A R++  ML R        LT LI+  C     
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK---H 483

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A EL  + + KG+  +  T   L+ GLC+ G  ++AFR+  +++        V +
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-S 542

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +ISG C ++K++ A M L+ M ++GL P+  TY+ LI G   +   E A    D   
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P++Y Y+ +IDG CK  R +E  E   +   + +Q + + Y  L+  + +     
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M   G++P+   YT+LI       +++E++  F+E    GL P    YT++I
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY + G +       + M+     P+ ITY  +I G  +   + EA +    M  KGI 
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782

Query: 575 PCEVTRVTLAYEYCKQG 591
           P  +T     Y Y KQG
Sbjct: 783 PDSITYKEFIYGYLKQG 799



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 219/484 (45%), Gaps = 43/484 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCA 216
           +++F + G+++E   +  +M   G+     T N V+     LG+    +E F   ++M  
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVE 323

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+     +Y ++V    R  R+ +A   L  M  +G   +      LI +F + G   S
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---S 380

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------ 318
           + +A E+ + MV KG      T+  LI G CK G  + A RL                  
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440

Query: 319 ----------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                           F+  +   N  P     T +ISG CK  K ++A  L  +   +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            + +T T  +L++G C+ G  + A+ +   +   GC  +  +YN +I G C K ++ EA+
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             L +  +R L+ D  TY+IL+       + ++A+  +    + G+ PD++ Y+ +I   
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+ ++ +E ++FF E ++  + P    Y  +I  Y R G +S A++  + M   G +P++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY +LI G+   S+++EA   +E M  +G+ P       L   Y K G       +L  
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740

Query: 603 LDKK 606
           +  K
Sbjct: 741 MHSK 744



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V       R+ + + ++ EMT  G P      N ++    E G +  A E+ D M ++G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   +S+Y  ++  YC+ G+   A+R L  ML  G  ++  + T +I   C      S  
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-- 453

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   + EM+ +   P     T LI GLCK G   KA  L+ + + +  +  +  T  A+
Sbjct: 454 -ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNAL 511

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  K++ A  + + +  +G + +  +Y +LI G C     + A+  +D M K G 
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+ +I GL    +V+EA +      +  +  D  TY++++    K   T++   
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M+   + P+   Y  LI A+CR  ++  + +  ++    G+ P   TYTS+I G  
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A   F+ M   G  P+   Y ALI G  K  ++ +       M  K + P ++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +   Y + G+   A  +L  + +K
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREK 779



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 14/361 (3%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L  ++   C+ G    A E++ +   +G   D  +   ++   C  G++ EA R    +L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG ++D  +   LI+  C K     + +AF  L+EMV++G KP+ YT+++LI GL    
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             E+A + F    + +   P+V+TY+ MI G CK E+    +   + M  + + PNT  Y
Sbjct: 590 KVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI  +C+ G    A +L + M  +G +PN   Y ++I G+    RV+EA  L ++   
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L+ +   YT L+  + K  +  +   L   M    ++P+   YT +I  + R   + E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +   E    G+ P   TY   I GYL+ G +  A K            D   Y A+I 
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIE 818

Query: 551 G 551
           G
Sbjct: 819 G 819



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 193/431 (44%), Gaps = 11/431 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  RV  AD   S  L     +      LLI  +C +  R     A ++   +  KG  P
Sbjct: 165 RDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFP 224

Query: 295 NVYTHTVLIDGLCKKGWTEK---AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  T  +L+  L +    +K   AF +  K V      P+V+ +T  I+ +CK  K+  A
Sbjct: 225 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGV-----SPDVYLFTTAINAFCKGGKVEEA 279

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L  +M+E G+ PN  T+ ++I G    G ++ A+   + M + G  P +  Y+ ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L +  R+ +AY +LK+  ++    + I Y  L+   ++     +A+ +   MV  GL+  
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y TLI  +C+  +   +E+  +E ++ G    + ++TS+IC         SA+++  
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M     +P       LISGLCK  K  +A + +   + KG      T   L +  C+ G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519

Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
               A  I + +  +  +    + NTLI   C +K++  A +F  +++ +    D  + +
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579

Query: 649 ALKNACYESNK 659
            L    +  NK
Sbjct: 580 ILICGLFNMNK 590


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 225/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T N VV   C+   ++ AE    +M  + 
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y   G+  EA R    M     + D  TL++L+ + C  G    IK
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG---KIK 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++ ++++G   KG       LF  L+  D   P+ +T+  +
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDFYTFNVL 413

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAYN +I G C  G + +A EL+ +     +  D + ++ +++   K      A  
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+PD   Y+ L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 593

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS--PC 576
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+   C
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDIC 653

Query: 577 EVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
               V       +  D A  +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 654 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 202/433 (46%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+     T N ++      G+++ A  +F+EM   G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y+ ++ A CR+G++ +A    + M+D+G   D      LI  FC     GS+ 
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT---HGSLL 494

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G   ++   + +I+ LCK G    A  +F  L  +    P+   Y+ +
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYSML 553

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M + G 
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ IIDGL + GR   A     +  +  +  D  TY I+L    K     +A+ 
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 673

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  +I    T+I    + ++++E++  F     + L P   TY+ MI   +
Sbjct: 674 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLI 733

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC P++     ++  L K++++  A  +   +  +  S   +
Sbjct: 734 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 793

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 794 TAMLLVDLFSSKG 806



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 207/483 (42%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM  + +     TL+ ++G  C+ G ++ A +VFD M  +G
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G   D  T  +LI A+ + G    + 
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM---LD 424

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 425 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYNCL 483

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y+ L+ G+C VG  E+A  + D M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 603

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  QR ++   I Y+I++    +   T  A   F  M ++G+  DI  Y  ++    
Sbjct: 604 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 663

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++    P+ +
Sbjct: 664 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVV 723

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 724 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783

Query: 604 DKK 606
           D++
Sbjct: 784 DER 786



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 219/479 (45%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 57  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSG-PALAVALFNRAASRAQ 115

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  ++      L+  FC+    
Sbjct: 116 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA--- 172

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 173 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 229

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY S+++  CK    ++A   
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +   PN + YN +I G    G+ +EA  + K+  +  +  D +T ++L+    K
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +Y  ++  +  +  + +    F   +  G+ P   T
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  PD +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G++P +     L   +C  G    A  +I E ++  + +  V  +++I  LC   RV
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 188/406 (46%), Gaps = 4/406 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++A  G L +   +  EM ++G+     T   V+   C +G ++ A E F++M  +G
Sbjct: 413 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  +C  G + +A   +S +++ G  LD    + +I   C  G     +
Sbjct: 473 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 532

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F+L    V  G  P+   +++L+DG C  G  EKA R+F  +V S   +PNV  Y  +
Sbjct: 533 NIFDL---TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVVYCTL 588

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GYCK  +++    L   M ++G+ P+T  Y+ +I G  + G    A      M + G 
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +I  YN ++ GL K     EA  L K+     ++ + IT   ++    +    ++A  
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + ++ L P++  Y+ +I    ++  ++E+E  F     AG  P       ++   L
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 768

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           +   I  A  Y  ++++   + +++T   L+     +    E  +F
Sbjct: 769 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 814



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L     + ++   C+LG V  A+ +FD    
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI---GR 597

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM+++G KP+   ++++IDGL + G T                        
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K N+ T   MI G  +  ++  A+ L   +   
Sbjct: 658 VLRGLFKNRCFDEAIFLF-KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            L+PN  TY+ +I    K G  E A D+   M   GC PN    N ++  L KK  +  A
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 777 GAYLSKIDERNFSLEHLTAMLLVD 800



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 6/277 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +  +G++++   +   M + G+         +V   C++G ++    +F EM
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGF 273
             RG+      Y +++    + GR   A      M + G  +D  T  +++   F ++ F
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCF 668

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +A  L +E+     K N+ T   +IDG+ +    E+A  LF  + RS    PNV 
Sbjct: 669 ----DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPNVV 723

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+ MI+   KE  +  AE +   M+  G  PN+     ++    K     RA   +  +
Sbjct: 724 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +   +        ++D    KG  +E    L   + 
Sbjct: 784 DERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAKYH 820


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 4/437 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ SF E G L +   +   M + GL L +ST N ++   C+ G  + AE +  EM
Sbjct: 356 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 415

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            + G   +  S+  ++   C       A R++  ML R        LT LI+  C     
Sbjct: 416 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK---H 472

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A EL  + + KG+  +  T   L+ GLC+ G  ++AFR+  +++        V +
Sbjct: 473 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-S 531

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +ISG C ++K++ A M L+ M ++GL P+  TY+ LI G   +   E A    D   
Sbjct: 532 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 591

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P++Y Y+ +IDG CK  R +E  E   +   + +Q + + Y  L+  + +     
Sbjct: 592 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 651

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M   G++P+   YT+LI       +++E++  F+E    GL P    YT++I
Sbjct: 652 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY + G +       + M+     P+ ITY  +I G  +   + EA +    M  KGI 
Sbjct: 712 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 771

Query: 575 PCEVTRVTLAYEYCKQG 591
           P  +T     Y Y KQG
Sbjct: 772 PDSITYKEFIYGYLKQG 788



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 219/484 (45%), Gaps = 43/484 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCA 216
           +++F + G+++E   +  +M   G+     T N V+     LG+    +E F   ++M  
Sbjct: 256 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVE 312

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG+     +Y ++V    R  R+ +A   L  M  +G   +      LI +F + G   S
Sbjct: 313 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---S 369

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------ 318
           + +A E+ + MV KG      T+  LI G CK G  + A RL                  
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429

Query: 319 ----------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                           F+  +   N  P     T +ISG CK  K ++A  L  +   +G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            + +T T  +L++G C+ G  + A+ +   +   GC  +  +YN +I G C K ++ EA+
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             L +  +R L+ D  TY+IL+       + ++A+  +    + G+ PD++ Y+ +I   
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+ ++ +E ++FF E ++  + P    Y  +I  Y R G +S A++  + M   G +P++
Sbjct: 610 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 669

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TY +LI G+   S+++EA   +E M  +G+ P       L   Y K G       +L  
Sbjct: 670 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 729

Query: 603 LDKK 606
           +  K
Sbjct: 730 MHSK 733



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V       R+ + + ++ EMT  G P      N ++    E G +  A E+ D M ++G
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   +S+Y  ++  YC+ G+   A+R L  ML  G  ++  + T +I   C      S  
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-- 442

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   + EM+ +   P     T LI GLCK G   KA  L+ + + +  +  +  T  A+
Sbjct: 443 -ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNAL 500

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  K++ A  + + +  +G + +  +Y +LI G C     + A+  +D M K G 
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+ +I GL    +V+EA +      +  +  D  TY++++    K   T++   
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  M+   + P+   Y  LI A+CR  ++  + +  ++    G+ P   TYTS+I G  
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A   F+ M   G  P+   Y ALI G  K  ++ +       M  K + P ++
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 740

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +   Y + G+   A  +L  + +K
Sbjct: 741 TYTVMIGGYARDGNVTEASRLLNEMREK 768



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 14/361 (3%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L  ++   C+ G    A E++ +   +G   D  +   ++   C  G++ EA R    +L
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 521

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG ++D  +   LI+  C K     + +AF  L+EMV++G KP+ YT+++LI GL    
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 578

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             E+A + F    + +   P+V+TY+ MI G CK E+    +   + M  + + PNT  Y
Sbjct: 579 KVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 637

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI  +C+ G    A +L + M  +G +PN   Y ++I G+    RV+EA  L ++   
Sbjct: 638 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 697

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L+ +   YT L+  + K  +  +   L   M    ++P+   YT +I  + R   + E
Sbjct: 698 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 757

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +   E    G+ P   TY   I GYL+ G +  A K            D   Y A+I 
Sbjct: 758 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIE 807

Query: 551 G 551
           G
Sbjct: 808 G 808



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 193/431 (44%), Gaps = 11/431 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  RV  AD   S  L     +      LLI  +C +  R     A ++   +  KG  P
Sbjct: 154 RDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFP 213

Query: 295 NVYTHTVLIDGLCKKGWTEK---AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  T  +L+  L +    +K   AF +  K V      P+V+ +T  I+ +CK  K+  A
Sbjct: 214 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGV-----SPDVYLFTTAINAFCKGGKVEEA 268

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L  +M+E G+ PN  T+ ++I G    G ++ A+   + M + G  P +  Y+ ++ G
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L +  R+ +AY +LK+  ++    + I Y  L+   ++     +A+ +   MV  GL+  
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y TLI  +C+  +   +E+  +E ++ G    + ++TS+IC         SA+++  
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M     +P       LISGLCK  K  +A + +   + KG      T   L +  C+ G
Sbjct: 449 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 508

Query: 592 DSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
               A  I  E L +   +  V  NTLI   C +K++  A +F  +++ +    D  + +
Sbjct: 509 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 568

Query: 649 ALKNACYESNK 659
            L    +  NK
Sbjct: 569 ILICGLFNMNK 579


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 201/393 (51%), Gaps = 18/393 (4%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D    T++I   C +     + +AF +LE  VR G +P+  T+ V IDGLCK    + AF
Sbjct: 6   DMVAFTVVINGLCREK---RLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 317 RLFLKLVRSDNYK--PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           +L  K+   D  K  P   TYTA++ G  K  +++ A  +LE+M E+G  P   TYT +I
Sbjct: 63  QLLKKM---DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119

Query: 375 YGHCKVGNFERAYDL-MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            G  K G  E A  + +D++G  GC P+ + Y A+I GLCK G+ +EAY L K+A  R+ 
Sbjct: 120 DGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178

Query: 434 QA----DKITYTILLSEHLKQAETKQALGLF-CRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            A    D +TYT L+    K     +A  +F    V+ G  PD   YT++I   C+  ++
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           +E  + F E    G  P   TY ++I G+++   I  A + +++M Q G     +TY  +
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL 607
           + GLCK  ++ EA   + +M  +G     VT   L   +C +G+ SA   +    LD+  
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358

Query: 608 WIRTV--NTLIRKLCSEKRVGMAALFFHKLLGK 638
               V  N +IR LC   ++  A  +F KLL +
Sbjct: 359 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 222/486 (45%), Gaps = 48/486 (9%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C    ++ A  V +     G   D  +Y + +   C+  RV +A + L  M ++ 
Sbjct: 13  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            +    T T L+      G    + +A  +LE+MV KG  P + T+TV+IDGL K G  E
Sbjct: 73  CLPTTVTYTALVDGLLKAG---RLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE----RMKEQGLLPNTNT 369
           +A R+F+ ++  +  +P+   YTA+I G CK  K   A  L +    R      +P+  T
Sbjct: 130 EARRIFVDML-GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           YTSLI G CK G    A  + D    E G  P+   Y +IIDGLCK GRV+E  E   + 
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
             R  + D +TY  L+   +K     +A  ++ +M+++G       Y  ++   C+  ++
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+   F      G   T  TY++++ G+  +GN+S+AV+ F+RM   GC P+ ++Y  +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 549 ISGLCKQSKLDEA--------------------------CQ----------FYESMIGKG 572
           I GLC+  KL +A                          CQ           +ESM+ +G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAA 629
            SP   +   L    C+ G    A+ I   +  +     V   NTLIR LC   RV  A 
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488

Query: 630 LFFHKL 635
             F +L
Sbjct: 489 EVFREL 494



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 13/388 (3%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P++   TV+I+GLC++   ++AF +  + VR+   +P+  TY   I G CK E+++ A  
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRA-GCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL++M E+  LP T TYT+L+ G  K G  + A  +++ M ++G +P +  Y  +IDGL 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF----CRMVKAGLN 469
           K GRV+EA  +         + D   YT L+    K  + ++A  L+     R   A   
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFF-QEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
           PD+  YT+LI   C+  ++ E+ + F  EA+  G  P   TYTS+I G  + G +    +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F  M   G  PD +TY ALI G  K   + +A + Y  M+  G     VT   +    C
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 589 KQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           K G  A A     +++++  + TV T   L+   CSE  V  A   F ++L +    + V
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 646 S----LAALKNACYESNKYALFSDLSQR 669
           S    +  L  A   +  Y  F  L QR
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQR 391



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 209/444 (47%), Gaps = 8/444 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ + F ++ +M        T T   +V    + G ++ A  V ++M  +G      +Y 
Sbjct: 57  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYT 116

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++    + GRV EA R    ML  G   D    T LI   C  G     ++A+ L +E 
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSG---KPEEAYALYKEA 173

Query: 288 -VRKGWK---PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
             RK      P+V T+T LIDGLCK G   +A ++F        + P+  TYT++I G C
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC 233

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K  ++         M+ +G  P+  TY +LI G  K     +A+ +   M + G   +  
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN I+DGLCK GRV EAY       +R   A  +TY+ L+     +     A+ LF RM
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL-RDGN 522
           +  G  P++ +Y  +I   CR  K+ ++  +F++ +   L P   T+ + + G   R   
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDT 413

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +S  V+ F+ M   G +P+  +Y  L+ G+C+   L+ A + +  M+ +G++P  V   T
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473

Query: 583 LAYEYCKQGDSATAMIILESLDKK 606
           L    C  G    A+ +   L+++
Sbjct: 474 LIRWLCIAGRVDEALEVFRELERR 497



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 218/461 (47%), Gaps = 26/461 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFSMVIEMT 180
           Y      L+  G  + A  V++ MV                  ++ GR++E   + ++M 
Sbjct: 80  YTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 139

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG----VCADASSYKLMVVAYCRM 236
            NG          ++   C+ G  E A  ++ E  AR        D  +Y  ++   C+ 
Sbjct: 140 GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKA 199

Query: 237 GRVTEADRWLS-AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           GR+ EA +      ++RG I D  T T +I   C  G    +++  E   EM  +G++P+
Sbjct: 200 GRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLG---RVEEGCERFHEMRNRGYEPD 256

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
             T+  LIDG  K     KA R++ ++++S      V TY  ++ G CK  ++  A    
Sbjct: 257 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV-TYNIILDGLCKAGRVAEAYATF 315

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+E+G +    TY++L+ G C  GN   A +L   M   GC PN+ +YN II GLC+ 
Sbjct: 316 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 375

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET-KQALGLFCRMVKAGLNPDIHA 474
           G++ +AY   +K  QR L  D  T+   L    ++ +T    + LF  MV  G +P++H+
Sbjct: 376 GKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHS 435

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+ L+   CR   ++ + + F+E ++ G+ P    + ++I      G +  A++ F+ + 
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           +   APD  +Y +L+ GL +  +++EA      M  +G +P
Sbjct: 496 RRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 8/261 (3%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+P++ A+  +I+GLC++ R+ EA+ +L++A +   + D +TY + +    K      A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  +M +    P    YT L+    +  ++ E+    ++ +  G  PT +TYT +I G 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG----I 573
            + G +  A + F  M   GC PD   Y ALI GLCK  K +EA   Y+    +      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIIL--ESLDKKLWIRTV--NTLIRKLCSEKRVGMAA 629
            P  VT  +L    CK G    A  +   E++++      V   ++I  LC   RV    
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
             FH++  +    D V+ AAL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAAL 263


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 227/493 (46%), Gaps = 30/493 (6%)

Query: 201 LGLVEYAEE-VFDEMC---ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           L L  +A+E +FD +    A G+ A +S++  +V A+   GR  +A +  S M +  +  
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRP 170

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                  ++ A  D G    I  A  L   MV  G  PN  T+ VL+DGLCK+G    A 
Sbjct: 171 TAFVYNTILKALVDSGV---ILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           ++F +++      PNV  YT ++S  C   K++ A  LL  MK++G LP+  TY + + G
Sbjct: 228 KMFDEML-DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CKVG    A+  + ++   G    +  Y+ +IDGL +  R  E +   K   +R +  D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            + YTI++    +    + AL     M K G  PD   Y T++   C    ++ +     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E +   L     T T MICG  + G +  A++ F  M + GC P  +TY ALI G  ++ 
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLA--------------YEYCKQGDSATAMIILES 602
           +L+EA   +  M   G +P    R+TL               ++ C+ G    A  +L S
Sbjct: 467 RLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 603 -LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACY 655
            +D  +   + T NTLI  LC  + +  A   F +L  K  + D ++   L +    A  
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 656 ESNKYALFSDLSQ 668
           E++   LF ++ Q
Sbjct: 586 ENDAMMLFQNILQ 598



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 244/554 (44%), Gaps = 51/554 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +  + G +    ++   M   G     +T N ++   C+ G+   A ++FDEM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----- 269
             RG+  +   Y +++ + C  G++ EA + L +M D+G + D  T    ++  C     
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 270 -----------DKGFRGSIK----------------QAFELLEEMVRKGWKPNVYTHTVL 302
                      D GF   +K                + F   + M+ +   P+V  +T++
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G  + G  E A   FL +++   + P+   Y  ++   C    + RA  L   M +  
Sbjct: 354 IRGCAEAGRIEDALS-FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+ ++ T T +I G CK G  + A  + D MG+ GC P +  YNA+IDG  ++GR++EA 
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEAR 472

Query: 423 ELLKKA---------FQRELQADKI----TYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            L  K           +  L A+++    +   L+ +  +  +  +A  L   ++ +G+ 
Sbjct: 473 MLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVV 532

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y TLI   C+ + +  + + F+E    G+ P + TY ++I G LR    + A+  
Sbjct: 533 PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMML 592

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYC 588
           FQ + Q G +P    Y +++  LC+  KL +A   +   + K  + P E   +  A++  
Sbjct: 593 FQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEI 652

Query: 589 KQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           + G     +  L  +D++    + N     +  LC  +R   A   FH L     ++   
Sbjct: 653 EDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPA 712

Query: 646 SLAALKN-ACYESN 658
             A L N  C++ N
Sbjct: 713 CCALLINYLCWDRN 726



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/554 (23%), Positives = 252/554 (45%), Gaps = 58/554 (10%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +++Y V  +SL + G  + A +++  M               +S   ++GR+ E F  ++
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 178 EMTNNGLPLITSTLNRVVGIACEL-GLVEYAEEVFDE-------MCARGVCADASSYKLM 229
            + + G  L       + G +C + GL  +    FDE       M  R +  D   Y +M
Sbjct: 302 MLQDGGFAL------GLKGYSCLIDGL--FQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +      GR+ +A  +L  M  +G + D      ++   CD    G +++A  L  EM++
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQ 410

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
                +  T T++I GLCK+G  ++A ++F ++       P V TY A+I G+ +E ++ 
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 350 RAEMLLERMKEQGLLP--------------NTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A ML  +M E G  P              ++ +   L++  C+ G   +AY L+  +  
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YN +I+GLCK   +  A  L K+   + +  D+ITY  L+   L+      
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKETYTSMI 514
           A+ LF  ++++G +P +  Y +++ + CR KK+ ++   + + +     FP +    +  
Sbjct: 589 AMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANA 648

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM--IGKG 572
              + DG++   V+   +++Q      +  Y   + GLC+  + D+A + + ++   G  
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGID 708

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKL--CSEKRVGMA 628
           I+P     + + Y    +  +A   I+L +L K + +     N L+R L  C  ++   A
Sbjct: 709 ITPA-CCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 629 ALFFHKLLGKDQNV 642
             +   L+G D +V
Sbjct: 768 LAWRMHLVGYDMDV 781


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 206/417 (49%), Gaps = 11/417 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFR 274
           A  V     +Y +++   CR GR+      L  ++ +G  ++  T T L+   C DK   
Sbjct: 80  AGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNV 332
            ++     +L  M      P+V++ T+L+ GLC +  +++A  L   +   R     P+V
Sbjct: 140 DAMDI---VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDV 196

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +YT +I+G+ KE   ++A      M ++ + P+  TY+S+I   CK    ++A +++  
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K G  PN   YN+I+ G C   + +EA   LKK     ++ D +TY  L+    K   
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
           + +A  +F  M K GL PDI  Y TL+  +  +  + E        +  G+ P    +  
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +IC Y +   +  A+  F +M Q G  P+ +TYGA+I  LCK   +D+A  ++E MI +G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 573 ISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
           ++P  +   +L +  C   + D A  + ILE LD+ + + T+  N++I   C E RV
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEEL-ILEMLDRGICLNTIFFNSIIHSHCKEGRV 492



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 222/477 (46%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM +  +     T + ++   C+   ++ A EV   M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  YC   +  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG---RST 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G +P++ T+  L+ G   KG   +   L   +VR +   P+ H +  +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR-NGIHPDHHVFNIL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+EK++ A ++  +M++ GL PN  TY ++I   CK G+ + A    + M  EG 
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPNI  Y ++I  LC   +  +A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ P++  Y+TLI  +C   KM E+ K      + G+ P   TY ++I GY 
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   +  A+  F+ M   G +P+ ITY  ++ GL    +   A + Y  +   G      
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS 617

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F
Sbjct: 618 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDR    D  T + +I A C KG   ++
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC-KG--QAM 247

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  PN  T+  ++ G C     ++A   FLK +RSD  +P+V TY +
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG-FLKKMRSDGVEPDVVTYNS 306

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK  +   A  + + M ++GL P+  TY +L+ G+   G     + L+DLM + G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + +N +I    K+ +V EA  +  K  Q  L  + +TY  ++    K      A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+  GL P+I  YT+LI + C   K  ++E+   E +  G+      + S+I  +
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G +  + K F  M +IG  P+ ITY  LI G C   K+DEA +   SM   G+ P  
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 578 VTRVTLAYEYCK--QGDSATAM 597
           VT  TL   YC+  + D A A+
Sbjct: 547 VTYNTLINGYCRVSRMDDALAL 568



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 209/439 (47%), Gaps = 11/439 (2%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           KE    + +M ++G+     T N ++   C+ G    A ++FD M  RG+  D ++Y  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +  Y   G + E    L  M+  G   D+    +LI A+  +     + +A  +  +M +
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE---KVDEAMLVFSKMRQ 399

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  PNV T+  +I  LCK G  + A   F +++  +   PN+  YT++I   C  +K +
Sbjct: 400 HGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI-DEGLTPNIIVYTSLIHSLCIFDKWD 458

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +AE L+  M ++G+  NT  + S+I+ HCK G    +  L DLM + G  PN+  Y+ +I
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DG C  G++ EA +LL   F   ++ D +TY  L++ + + +    AL LF  MV +G++
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+I  Y  ++      ++   +++ +     +G      TY  ++ G  ++     A++ 
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           FQ +       +  T+  +I  L K  + DEA   + +    G+ P   T   +A     
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698

Query: 590 QGDSATAMIILESLDKKLW 608
           QG       +LE LD+  +
Sbjct: 699 QG-------LLEELDQLFF 710



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 184/390 (47%), Gaps = 26/390 (6%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTY 335
           + A  + +E++R+G   ++Y     +  + +        R + ++ R+   K  P VHTY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL--- 392
             +I   C+  +++     L  + ++G      T+T L+ G C     +R  D MD+   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCAD---KRTSDAMDIVLR 147

Query: 393 -MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE---LQADKITYTILLSEHL 448
            M +  C P++++   ++ GLC + R QEA ELL             D ++YT +++   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+ ++ +A   +  M+   ++PD+  Y+++IAA C+ + M ++ +     +  G+ P   
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY S++ GY        A+ + ++M   G  PD +TY +L+  LCK  +  EA + ++SM
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--------TVNTLIRKLC 620
             +G+ P   T  TL   Y  +G    A++ + +L   L +R          N LI    
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKG----ALVEMHAL-LDLMVRNGIHPDHHVFNILICAYA 382

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +++V  A L F K+     N + V+  A+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 39/326 (11%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S     +  +   +++EM + G+ L T   N ++   C+ G V  +E++FD M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  +  +Y  ++  YC  G++ EA + LS+M   G   D  T   LI  +C     
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS-- 560

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL---------------------------- 306
             +  A  L +EMV  G  PN+ T+ +++ GL                            
Sbjct: 561 -RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 307 -------CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                  CK   T++A R+F  L  +D  +    T+  MI    K  + + A+ L     
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFVAFS 678

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             GL+PN  TY  +       G  E    L   M   GCT +    N I+  L ++G + 
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 420 EAYELLKKAFQRELQADKITYTILLS 445
            A   L    ++    +  T ++ + 
Sbjct: 739 RAGTYLSMIDEKHFSLEASTASLFID 764


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 225/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T N VV   C+   ++ AE    +M  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y   G+  EA R    M     + D  TL++L+ + C  G    IK
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG---KIK 341

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++ ++++G   KG       LF  L+  D   P+ +T+  +
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDFYTFNVL 400

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAYN +I G C  G + +A EL+ +     +  D + ++ +++   K      A  
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+PD   Y+ L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 521 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 580

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS--PC 576
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+   C
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDIC 640

Query: 577 EVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
               V       +  D A  +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 697



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 203/433 (46%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+     T N ++      G+++ A  +F+EM   G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y+ ++ A CR+G++ +A    + M+D+G   D      LI  FC     GS+ 
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT---HGSLL 481

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G   ++   + +I+ LCK G    A  +F  L  +    P+   Y+ +
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYSML 540

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M + G 
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ IIDGL + GR   A     +  +  +  D  TY I+L    K     +A+ 
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 660

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  +I    T+I    + ++++E++  F     + L P+  TY+ MI   +
Sbjct: 661 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 720

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC P++     ++  L K++++  A  +   +  +  S   +
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 780

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 781 TTMLLVDLFSSKG 793



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 206/483 (42%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM  + +     TL+ ++G  C+ G ++ A +VFD M  +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G   D  T  +LI A+ + G    + 
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM---LD 411

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYNCL 470

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y+ L+ G+C VG  E+A  + D M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  QR ++   I Y+I++    +   T  A   F  M ++G+  DI  Y  ++    
Sbjct: 591 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLF 650

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++    P  +
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVV 710

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 604 DKK 606
           D++
Sbjct: 771 DER 773



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 219/479 (45%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSG-PALAVALFNRAASRAQ 102

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  ++      L+  FC+    
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA--- 159

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 160 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY S+++  CK    ++A   
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +   PN + YN +I G    G+ +EA  + K+  +  +  D +T ++L+    K
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +Y  ++  +  +  + +    F   +  G+ P   T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  PD +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G++P +     L   +C  G    A  +I E ++  + +  V  +++I  LC   RV
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 9/402 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++A  G L +   +  EM ++G+     T   V+   C +G ++ A E F++M  +G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  +C  G + +A   +S +++ G  LD    + +I   C  G     +
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F+L    V  G  P+   +++L+DG C  G  EKA R+F  +V S   +PNV  Y  +
Sbjct: 520 NIFDL---TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVVYCTL 575

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GYCK  +++    L   M ++G+ P+T  Y+ +I G  + G    A      M + G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +I  YN ++ GL K     EA  L K+     ++ + IT   ++    +    ++A  
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + ++ L P +  Y+ +I    ++  ++E+E  F     AG  P       ++   L
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 755

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALIS-----GLCKQ 555
           +   I  A  Y  ++++   + +++T   L+      G C++
Sbjct: 756 KKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L     + ++   C+LG V  A+ +FD    
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI---GR 584

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM+++G KP+   ++++IDGL + G T                        
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K N+ T   MI G  +  ++  A+ L   +   
Sbjct: 645 VLRGLFKNRCFDEAIFLF-KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            L+P+  TY+ +I    K G  E A D+   M   GC PN    N ++  L KK  +  A
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVD 787



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 6/233 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +  +G++++   +   M + G+         +V   C++G ++    +F EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGF 273
             RG+      Y +++    + GR   A      M + G  +D  T  +++   F ++ F
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCF 655

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +A  L +E+     K N+ T   +IDG+ +    E+A  LF  + RS    P+V 
Sbjct: 656 ----DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPSVV 710

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           TY+ MI+   KE  +  AE +   M+  G  PN+     ++    K     RA
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 227/491 (46%), Gaps = 39/491 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G++ + +++ ++MT+ G+P    T   V+   C+  +V+ AE VF +M  +G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y  +G+  E  R L  M   G   D  T  LL+   C KG      
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG---KCT 326

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDG--------------------------------- 305
           +A +L + M+RKG KP+V  + +++ G                                 
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386

Query: 306 --LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               KK    +A  +F K+ R     PNV  Y  +I   CK  +++ AE+   +M  +G+
Sbjct: 387 CAFAKKAMIGEAMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   +TSL+YG C +  +E+A +L   M  +G  PN+  +N I+  LC +GRV +A  
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+    +   + D I+Y  L+  H    +T +A  L   M+  GL P+   Y TL+  +C
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R  ++ ++   FQE ++ G+ P   TY +++ G  +    S A + +  M   G      
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +++GL K + +DEA + ++S+  K +    +T   +     K G    AM +  ++
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 604 DKKLWIRTVNT 614
                +  V T
Sbjct: 686 SANGLVPDVTT 696



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 225/514 (43%), Gaps = 49/514 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV--GIACELGLVEYAEEVFDEMCA 216
           +V  F  +GRL+ GF+    +   G  +    +   +  G+     + E    +   M  
Sbjct: 100 LVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSE 159

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD---RGAILDNATLTLLITAFCDKGF 273
            G   +  SY  ++  +C   R  EA   L  M D   R    +  +   +I  F  +G 
Sbjct: 160 LGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEG- 218

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              + +A+ L  +M  +G  PNV T+T++IDGLCK    ++A  +F +++     +PN+ 
Sbjct: 219 --QVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI-DKGVRPNIV 275

Query: 334 TYTAMISGY-----------------------------------CKEEKMNRAEMLLERM 358
           TYT +I GY                                   CK+ K   A  L + M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G+ P+ + Y  +++G+   G     +  +DLM   G +PN Y +N +     KK  +
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA ++  K  Q+ L  + + Y  L+    K      A   F +M+  G+ P+I  +T+L
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +   C   K +++ + F E +  G+ P    + +++C    +G +  A +    M ++G 
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT 515

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATA 596
            PD I+Y ALI G C   K DEA +  + M+  G+ P E T  TL + YC+ G  D A +
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYS 575

Query: 597 MIILESLDKKLW--IRTVNTLIRKLCSEKRVGMA 628
            +  E L   +   + T NT++  L   +R   A
Sbjct: 576 -VFQEMLSNGITPVVVTYNTILHGLFKTRRFSEA 608



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 214/485 (44%), Gaps = 41/485 (8%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  +  IG+ KE   M+ EM+ +GL     T   ++   C+ G    A ++FD M  +
Sbjct: 279 CLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRK 338

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D S Y +++  Y   G ++E   +L  M+  G   ++    ++  AF  K   G  
Sbjct: 339 GIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIG-- 396

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG--------------------------- 310
            +A ++  +M ++G  PNV  +  LID LCK G                           
Sbjct: 397 -EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 311 ---------WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                    W EKA  LF ++V +    PNV  +  ++   C E ++ +A+ L++ M+  
Sbjct: 456 VYGLCTIDKW-EKAGELFFEMV-NQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERV 513

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P+  +Y +LI GHC VG  + A  L+D+M   G  PN   YN ++ G C+ GR+ +A
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           Y + ++     +    +TY  +L    K     +A  L+  M+ +G    I+ Y  ++  
Sbjct: 574 YSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNG 633

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             +   + E+ K FQ   +  L     T+  MI   L+DG    A+  F  ++  G  PD
Sbjct: 634 LSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPD 693

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             TY  +   L ++  L+E    +  M   G +P  +    L      +GD + A   L 
Sbjct: 694 VTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLS 753

Query: 602 SLDKK 606
            +D+K
Sbjct: 754 KIDEK 758



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 194/418 (46%), Gaps = 8/418 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A  G L E  S +  M  NG+       N V     +  ++  A ++F++M  +G
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG 409

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--DKGFRGS 276
           +  +  +Y  ++ A C++GRV +A+   + M++ G   +    T L+   C  DK     
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKW---- 465

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            ++A EL  EMV +G  PNV     ++  LC +G   KA RL + L+     +P++ +Y 
Sbjct: 466 -EKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL-IDLMERVGTRPDIISYN 523

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           A+I G+C   K + A  LL+ M   GL PN  TY +L++G+C+ G  + AY +   M   
Sbjct: 524 ALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSN 583

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G TP +  YN I+ GL K  R  EA EL         Q    TY I+L+   K     +A
Sbjct: 584 GITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEA 643

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L +F  +    L  DI  +  +I A  +  + +++   F      GL P   TY  +   
Sbjct: 644 LKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAEN 703

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            + +G++      F  M + GCAP+++    L+  L  +  +  A  +   +  K  S
Sbjct: 704 LIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFS 761



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 39/338 (11%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V     I + ++   +  EM N G+       N ++   C  G V  A+ + D M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D  SY  ++  +C +G+  EA + L  ML  G   +  T   L+  +C  G  
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDG-- 568

Query: 275 GSIKQAFELLEEMVRKGWKP-----------------------------------NVYTH 299
             I  A+ + +EM+  G  P                                   ++YT+
Sbjct: 569 -RIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY 627

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            ++++GL K    ++A ++F  L   D  + ++ T+  MI    K+ +   A  L   + 
Sbjct: 628 NIILNGLSKNNCVDEALKMFQSLCSKD-LQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             GL+P+  TY  +     + G+ E    +   M K GC PN    N ++  L  +G + 
Sbjct: 687 ANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDIS 746

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            A   L K  ++    +  T ++L+S   ++    ++L
Sbjct: 747 RAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSL 784


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 204/409 (49%), Gaps = 13/409 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFEL 283
           +Y +++   CR GR+      L  ++ +G  ++  T T L+   C DK        A ++
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADK----RTSDAMDI 144

Query: 284 -LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNVHTYTAMIS 340
            L  M      P+V++ T+L+ GLC +  +++A  L   +   R     P+V +YT +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G+ KE   ++A      M ++ + P+  TY+S+I   CK    ++A +++  M K G  P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N   YN+I+ G C   + +EA   LKK     ++ D +TY  L+    K   + +A  +F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M K GL PDI  Y TL+  +  +  + E        +  G+ P    +  +IC Y + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  A+  F +M Q G  P+ +TYGA+I  LCK   +D+A  ++E MI +G++P  +  
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 581 VTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +L +  C   + D A  + ILE LD+ + + T+  N++I   C E RV
Sbjct: 445 TSLIHSLCIFDKWDKAEEL-ILEMLDRGICLNTIFFNSIIHSHCKEGRV 492



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 221/466 (47%), Gaps = 7/466 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           KE    + +M ++G+     T N ++   C+ G    A ++FD M  RG+  D ++Y  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +  Y   G + E    L  M+  G   D+    +LI A+  +     + +A  +  +M +
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE---KVDEAMLVFSKMRQ 399

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G  PNV T+  +I  LCK G  + A   F +++  +   PN+  YT++I   C  +K +
Sbjct: 400 HGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI-DEGLTPNIIVYTSLIHSLCIFDKWD 458

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +AE L+  M ++G+  NT  + S+I+ HCK G    +  L DLM + G  PN+  Y+ +I
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DG C  G++ EA +LL   F   ++ D +TY  L++ + + +    AL LF  MV +G++
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+I  Y  ++      ++   +++ +     +G      TY  ++ G  ++     A++ 
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           FQ +       +  T+  +I  L K  + DEA   + ++   G+ P   T   +A    +
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 698

Query: 590 QGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFF 632
           QG       +  S+++       R +N+++RKL     +  A  + 
Sbjct: 699 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL 744



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 223/480 (46%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM +  +     T + ++   C+   ++ A EV   M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  YC   +  EA  +L  M   G   D  T   L+   C  G      
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS---T 318

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M ++G +P++ T+  L+ G   KG   +   L   +VR +   P+ H +  +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR-NGIHPDHHVFNIL 377

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K+EK++ A ++  +M++ GL PN  TY ++I   CK G+ + A    + M  EG 
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPNI  Y ++I  LC   +  +A EL+ +   R +  + I +  ++  H K+    ++  
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV+ G+ P++  Y+TLI  +C   KM E+ K      + G+ P   TY ++I GY 
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   +  A+  F+ M   G +P+ ITY  ++ GL    +   A + Y  +   G      
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS 617

Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    R   A   F  L
Sbjct: 618 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 677



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDR    D  T + +I A C KG   ++
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC-KG--QAM 247

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  PN  T+  ++ G C     ++A   FLK +RSD  +P+V TY +
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG-FLKKMRSDGVEPDVVTYNS 306

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CK  +   A  + + M ++GL P+  TY +L+ G+   G     + L+DLM + G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + +N +I    K+ +V EA  +  K  Q  L  + +TY  ++    K      A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+  GL P+I  YT+LI + C   K  ++E+   E +  G+      + S+I  +
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G +  + K F  M +IG  P+ ITY  LI G C   K+DEA +   SM   G+ P  
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 578 VTRVTLAYEYCK--QGDSATAM 597
           VT  TL   YC+  + D A A+
Sbjct: 547 VTYNTLINGYCRVSRMDDALAL 568



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 184/390 (47%), Gaps = 26/390 (6%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTY 335
           + A  + EE++R+G   ++Y     +  + +        R + ++ R+   K  P VHTY
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL--- 392
             +I   C+  +++     L  + ++G      T+T L+ G C     +R  D MD+   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA---DKRTSDAMDIVLR 147

Query: 393 -MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE---LQADKITYTILLSEHL 448
            M +  C P++++   ++ GLC + R QEA ELL             D ++YT +++   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+ ++ +A   +  M+   ++PD+  Y+++IAA C+ + M ++ +     +  G+ P   
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY S++ GY        A+ + ++M   G  PD +TY +L+  LCK  +  EA + ++SM
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--------TVNTLIRKLC 620
             +G+ P   T  TL   Y  +G    A++ + +L   L +R          N LI    
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKG----ALVEMHAL-LDLMVRNGIHPDHHVFNILICAYA 382

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            +++V  A L F K+     N + V+  A+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 39/324 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S     +  +   +++EM + G+ L T   N ++   C+ G V  +E++FD M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  +  +Y  ++  YC  G++ EA + LS+M   G   D  T   LI  +C     
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS-- 560

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL---------------------------- 306
             +  A  L +EMV  G  PN+ T+ +++ GL                            
Sbjct: 561 -RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 307 -------CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                  CK   T++A R+F  L  +D  +    T+  MI    K  + + A+ L   + 
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALS 678

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             GL+P+  TY+ +     + G  E   DL   M + GCT N    N+I+  L ++G + 
Sbjct: 679 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 738

Query: 420 EAYELLKKAFQRELQADKITYTIL 443
            A   L    ++    +  T ++L
Sbjct: 739 RAGTYLSMIDEKHFSLEASTASLL 762


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 229/477 (48%), Gaps = 16/477 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   V  A ++ DEM  +G   D  +Y  +V   C++ R+ EA   L+AM    A    
Sbjct: 147 CQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAA---- 202

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +   ++ A C + FR  +++ F ++ +MV +G +PNV T+T ++D  CK G    A  +
Sbjct: 203 -SYNAIVLALC-REFR--MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 258

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             ++V +    PNV T+TA++ G   + +++ A  +   M  +G  P+T +Y  LI G C
Sbjct: 259 LARMVIT-GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 317

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG+ + A  +++ M + GC PN+  Y+ +IDG  K G +  A  +     +   + + +
Sbjct: 318 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 377

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            YT ++    K+    QA  L  +M+     P+   + TLI + C  +++  +   F E 
Sbjct: 378 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 437

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   TY  +I G  R+GN   A+     M   G     +TY  ++SGLC+    
Sbjct: 438 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 497

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD-----KKLWIRTVN 613
            EA  F   MI +GI P   T   + + YCK+G+   A  +L +++     + + + T+ 
Sbjct: 498 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI- 556

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
            L+ +LC++ ++  A  +  K+L +    + V+   L    + +      SD  Q I
Sbjct: 557 -LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 612



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 199/447 (44%), Gaps = 44/447 (9%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+     M+ EM   G P    T   +V + C+L  ++ A EV   M        A+SY 
Sbjct: 151 RVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV-----AASYN 205

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V+A CR  R+ E    +S M+ RG   +  T T ++ AFC     G ++ A  +L  M
Sbjct: 206 AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA---GELRMACAILARM 262

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V  G  PNV T T L+ GL   G    A  ++  +V ++ + P+  +Y  +I G C    
Sbjct: 263 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV-AEGWAPSTVSYNILIRGLCSVGD 321

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A  +L  M++ G  PN  TY++LI G  K G+   A  + + M + GC PN+  Y  
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++D  CKK    +A  L+ K        + +T+  L+          +ALG+F  M + G
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441

Query: 468 LNPD-------IHA----------------------------YTTLIAAFCRQKKMKESE 492
             P+       IH                             Y T+++  C+ +  +E+ 
Sbjct: 442 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 501

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            F  + I  G+ P   T++++I  Y ++G +  A      MN + C  + + Y  L++ L
Sbjct: 502 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 561

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVT 579
           C Q KL +A  +   M+ +GI P  VT
Sbjct: 562 CNQDKLVDAMTYLLKMLYEGIYPNTVT 588



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 10/434 (2%)

Query: 93  DSLTHEQAITVVASLA--NEA----GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISN 146
           D +T+   ++V+  L   +EA     +M  ++  Y AI  A  R F    +    S +  
Sbjct: 170 DDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVG 229

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
              +        +V +F + G L+   +++  M   G      T   +V    + G V  
Sbjct: 230 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 289

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +++  M A G      SY +++   C +G +  A   L++M   G   +  T + LI 
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 349

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G  G    A  +  +M R G KPNV  +T ++D  CKK    +A  L  K++  +
Sbjct: 350 GFSKAGDLGG---AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL-E 405

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  PN  T+  +I   C   ++ RA  +   M+  G +PN  TY  LI+G  + GN   A
Sbjct: 406 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 465

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             ++  M   G   ++  YN ++ GLC+    +EA   + K   + +Q +  T++ ++  
Sbjct: 466 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 525

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K+ E + A  +   M     + +I  YT L+A  C Q K+ ++  +  + +  G++P 
Sbjct: 526 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 585

Query: 507 KETYTSMICGYLRD 520
             T+  ++ G  R+
Sbjct: 586 TVTWNVLVRGVFRN 599



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 213/519 (41%), Gaps = 57/519 (10%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVI-EMTNNGLPLITSTLNRVVGIACELGLVE 205
           G+  RAHE     V   A  G + +G  + + EM   G+P     L   VG     G  +
Sbjct: 52  GDAARAHEAA---VRRLAAAGDV-DGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPD 107

Query: 206 YAEEVF-----DEMCARGVCADA------SSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
            A + F     D  CAR   A A       +      A C+  RV  A + L  M  +G 
Sbjct: 108 RALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGC 167

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D+ T   +++  C       + +A E+L  M      P   ++  ++  LC++   ++
Sbjct: 168 PPDDVTYATIVSVLCKLD---RLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQE 219

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
            F +   +V     +PNV TYT ++  +CK  ++  A  +L RM   G  PN  T+T+L+
Sbjct: 220 VFSVVSDMV-GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 278

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G    G    A D+   M  EG  P+  +YN +I GLC  G ++ A  +L    Q    
Sbjct: 279 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 338

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY+ L+    K  +   A+ ++  M ++G  P++  YT ++  FC++    +++  
Sbjct: 339 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 398

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             + +     P   T+ ++I        +  A+  F  M + GC P+  TY  LI GL +
Sbjct: 399 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR 458

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           +    +A      M   GI                                +L + T NT
Sbjct: 459 EGNCGDALHMVTEMQSHGI--------------------------------ELSLVTYNT 486

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           ++  LC  +    A +F  K++ +    +  + +A+ +A
Sbjct: 487 VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 525


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 241/492 (48%), Gaps = 13/492 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEM--TNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           ++V+Q  V++    G L    +MV  M  +    P    + N V+      G    A +V
Sbjct: 161 NKVVQACVAA----GDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKV 216

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           FDEM   GV  +  +Y  M+  + + G +    R    ML  G   +  T  +L++  C 
Sbjct: 217 FDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCR 276

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            G    + +   L++EM      P+ +T+++L DGL + G +     LF + ++      
Sbjct: 277 AG---RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK-GVML 332

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
             +T + +++G CK+ K+ +AE +LE +   GL+P T  Y +LI G+C+V +   A+ + 
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M      P+   YNA+I+GLCK   V +A +L+ +  +  +     T+  L+  +   
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            + ++   +   M + G+  D+ ++ +++ AFC+  K+ E+     + I   + P  + Y
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S+I  Y+  G+   A    ++M   G +   +TY  L+ GLC+ S++DEA +   ++  
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGM 627
           +G+ P  V+  T+    C +GD+  A+ +L+ ++K   +  +RT +TL+  L S  RV  
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632

Query: 628 AALFFHKLLGKD 639
               + ++L K+
Sbjct: 633 MECLYQQMLHKN 644



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 214/450 (47%), Gaps = 5/450 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G L+ GF +  +M ++G      T N ++   C  G ++    + DEM +  
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y ++     R G         +  L +G +L   T ++L+   C  G    + 
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG---KVA 351

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE +V  G  P    +  LI+G C+      AF +F ++ +S + +P+  TY A+
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNAL 410

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK E + +AE L+  M++ G+ P+  T+ +LI  +   G  E+ + ++  M ++G 
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++ ++ +++   CK G++ EA  +L     +++  +   Y  ++  +++  +T+QA  
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M  +G++  I  Y  L+   CR  ++ E+E+        GL P   +Y ++I    
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G+   A++  Q MN+ G  P   TY  L+S L    ++ +    Y+ M+ K + P   
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 579 TRVTLAYEYCK-QGDSATAMIILESLDKKL 607
               +   Y + + DS  A +  E  +K +
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 4/383 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G    A ++ +EMV  G  PN  T+  +IDG  K G  E  FRL  +++  D  KPN+ T
Sbjct: 208 GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH-DGPKPNIVT 266

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++SG C+  +M+   +L++ M    + P+  TY+ L  G  + G       L     
Sbjct: 267 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 326

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+G     Y  + +++GLCK G+V +A ++L+      L    + Y  L++ + +  + +
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +M    + PD   Y  LI   C+ + + ++E    E   +G+ P+ ET+ ++I
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y   G +         M Q G   D I++G+++   CK  K+ EA    + MI K ++
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P      ++   Y + GD+  A +++E +        I T N L++ LC   ++  A   
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 632 FHKLLGKDQNVDRVSLAALKNAC 654
            + L  +    D VS   + +AC
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISAC 589



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 181/385 (47%), Gaps = 7/385 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           ++  LL+ +    G    ++ AF LL   V  G +P+ +    ++      G  + A  +
Sbjct: 123 SSCNLLLESLLFVGRHADVRAAFGLL---VAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 319 FLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
             ++ RS+   P +  +Y  +I+G  +  K + A  + + M + G++PN  TY ++I GH
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K G+ E  + L D M  +G  PNI  YN ++ GLC+ GR+ E   L+ +     +  D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY+IL     +  E++  L LF   +K G+    +  + L+   C+  K+ ++E+  + 
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL PT   Y ++I GY +  ++  A   F++M      PD+ITY ALI+GLCK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
           + +A      M   G+ P   T  TL   Y   G       +L  + +K     + +  +
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKD 639
           +++  C   ++  A      ++ KD
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKD 504



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 180/384 (46%), Gaps = 4/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +       G  +   S+  E    G+ L   T + ++   C+ G V  AE+V + +   G
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +      Y  ++  YC++  +  A      M  R    D+ T   LI   C       + 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM---VT 421

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L+ EM + G  P+V T   LID     G  EK F + L  ++    K +V ++ ++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV-LSDMQQKGIKSDVISFGSV 480

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +CK  K+  A  +L+ M  + + PN   Y S+I  + + G+ E+A+ L++ M   G 
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 540

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +I  YN ++ GLC+  ++ EA EL+     + L+ D ++Y  ++S    + +T +AL 
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M K G+ P +  Y TL++A     ++ + E  +Q+ +   + P+   Y  M+  Y+
Sbjct: 601 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 519 RDGNISSAVKYFQRMNQIGCAPDN 542
           R  N S      + M++ G A D+
Sbjct: 661 RCENDSKVASLKKEMSEKGIAFDD 684



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++ + ++  L+  F +  +M +  +     T N ++   C+L +V  AE++  EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV     ++  ++ AY   G++ +    LS M  +G   D  +   ++ AFC     
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN--- 487

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I +A  +L++M+ K   PN   +  +ID   + G TE+AF L  K+ ++     ++ T
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVT 546

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++ G C+  +++ AE L+  ++ QGL P+  +Y ++I   C  G+ ++A +L+  M 
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K G  P +  Y+ ++  L   GRV +   L ++   + ++     Y I++  +++     
Sbjct: 607 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 666

Query: 455 QALGLFCRMVKAGL 468
           +   L   M + G+
Sbjct: 667 KVASLKKEMSEKGI 680



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 4/258 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++   ++  + +   +V+EM  +G+     T N ++      G +E    V  
Sbjct: 404 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+ +D  S+  +V A+C+ G++ EA   L  M+ +    +      +I A+ +  
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES- 522

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G  +QAF L+E+M   G   ++ T+ +L+ GLC+    ++A  L   L R+   +P+V
Sbjct: 523 --GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDV 579

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y  +IS  C +   ++A  LL+ M + G+ P   TY +L+      G       L   
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 393 MGKEGCTPNIYAYNAIID 410
           M  +   P+   Y  ++D
Sbjct: 640 MLHKNVEPSSSIYGIMVD 657


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 8/506 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           +F+    +   +++S+ +  +L +       +  + +      LN ++    +  ++  A
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEA 228

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
            EV+++M  +GV  D  +  +M+ A  +     EA ++      RG  LD A  +++I A
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FC       ++ A  LL++M  KGW P+  T T +I    K+G   +A RL  ++V S  
Sbjct: 289 FCK---NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV-SCG 344

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            + NV   T ++ GYCK++K+  A    ++M E G  PN  TY  LI   CK GN  +AY
Sbjct: 345 VQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAY 404

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           DL   M  +   P ++  N++I G  K    +EA +L  +A   ++ A+  TY  LLS  
Sbjct: 405 DLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWL 463

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+ +  +A  L+ +M+  GL P   +Y ++I   CRQ  +  +   F + +  GL P  
Sbjct: 464 CKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNV 523

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+ ++ GY ++G+   A   F RM      P + TY   I+GLCK  +  EA    + 
Sbjct: 524 ITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKK 583

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKR 624
            + KG  P  +T  ++   + K+G  ++A+     +        + T  TLI   C    
Sbjct: 584 FVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNN 643

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAAL 650
             +A    +++  K   +D  +  AL
Sbjct: 644 TDLALKMRNEMRNKGLELDIAAYGAL 669



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 233/527 (44%), Gaps = 14/527 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +V  + +  +L        +M  NG      T   ++   C+ G +  A +++ +M
Sbjct: 351 VATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQM 410

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA---TLTLLITAFCDK 271
             + +C        ++  + ++    EA    S + D     D A   T   L++  C +
Sbjct: 411 KNKNICPTVFIVNSLIRGFLKVESREEA----SKLFDEAVACDIANIFTYNSLLSWLCKE 466

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    + +A  L ++M+ KG  P   ++  +I G C++G  + A  +F  ++     KPN
Sbjct: 467 G---KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC-GLKPN 522

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY+ ++ GY K      A  + +RM ++ ++P+  TY   I G CKVG    A D++ 
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
              ++G  P    YN+I+DG  K+G V  A    ++  +  +  + ITYT L++   K  
Sbjct: 583 KFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
            T  AL +   M   GL  DI AY  LI  FC+++ ++ +   F E +  GL P    Y 
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYN 702

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S+I GY    N+ +A+   +RM   G + D  TY  LI GL K+ +L  A   Y  M  K
Sbjct: 703 SLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAK 762

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMA 628
           GI P  +    L    C +G    A  IL  +++      V   N LI        +  A
Sbjct: 763 GIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEA 822

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
               +++L K    +  +   L N   +    AL S LS +  +G G
Sbjct: 823 FRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKFKDGKG 869



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 171/406 (42%), Gaps = 40/406 (9%)

Query: 276 SIKQAFELLEEMVR--KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           ++KQA  LL   +    G  PN+     L+D              F+   +  ++  ++ 
Sbjct: 134 TLKQAQNLLNRFISGDSGPMPNI-----LVDH-------------FIGSTKRFDFDSDIR 175

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  +++ Y K  K+N A     R+ E  ++P       L+    K      A ++ + M
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G   + +  + ++    K    +EA +   +A  R ++ D   Y+I++    K  + 
Sbjct: 236 VLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDV 295

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A GL   M   G  P    +T++I A  +Q  M E+ +   E ++ G+       T++
Sbjct: 296 ELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTL 355

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + GY +   + SA+++F +MN+ G +P+ +TY  LI   CK   + +A   Y  M  K I
Sbjct: 356 VKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI 415

Query: 574 SPCEVT---------RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
            P             +V    E  K  D A A  I         I T N+L+  LC E +
Sbjct: 416 CPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIAN-------IFTYNSLLSWLCKEGK 468

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESN---KYALFSDL 666
           +  A   + K+L K     +VS  ++    C + N     ++FSD+
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 201/415 (48%), Gaps = 20/415 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+G   +   V+     F EM A  V  + +++ +++ A C  G+   A   L  M
Sbjct: 146 TCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKM 205

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            + G      T   L+  +C K   G  K A EL++ M  KG   +V T+ VLID LC+K
Sbjct: 206 DETGHFPTAVTYNTLLNWYCKK---GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRK 262

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
             + K + L L+ +R +   PN  TY  +I+G  KE K+  A  + E M    LLPN+ T
Sbjct: 263 SRSAKGY-LILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVT 321

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +LI+GHC  GN E A  L D+M   G  PN   Y A+++G+ K  +      +L++  
Sbjct: 322 YNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMR 381

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              ++   I+YT ++    K    ++A+ L   M+K  ++PDI  ++ L+  F +     
Sbjct: 382 MDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLK----- 436

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
                       GL P +  ++++I  Y + GN+  A+  +  MNQ G   D+ T   L+
Sbjct: 437 -----------TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLV 485

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +  C+  +L+EA  F + M   G++P  VT   +   Y   GD+  A  + + ++
Sbjct: 486 ASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMN 540



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 229/529 (43%), Gaps = 49/529 (9%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +V+SF   GRL+E    V  M+  GL   + T + ++      G    A  VFD
Sbjct: 478 HFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFD 537

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWL----SAMLDRGAILDNATLTLLITAF 268
           +M + G      +Y+ ++      G + EA  ++    S     G+   N  LTL   + 
Sbjct: 538 KMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRS- 596

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                 G++  A  LL+EMV   + P+ +T+T LI GLC+KG    A  L  + +     
Sbjct: 597 ------GNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLL 650

Query: 329 KPNVHTYTAMISG-----------------------------------YCKEEKMNRAEM 353
            PN   YT+++ G                                   Y ++ KM++   
Sbjct: 651 SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVND 710

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L  M+ + L  N  TY  L++G+ K     R   L + M   G  P+   ++++I G C
Sbjct: 711 ILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC 770

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G +  A + L+K      + D  T  +L+S+  ++ E K A  L  ++   G+ P++ 
Sbjct: 771 KSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVD 830

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y +L   F R     E+       +  G  PT + +T++I G  R GN+  A++    M
Sbjct: 831 TYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 890

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +G +   +   A+I GL +  K DEA +    M+   I P   T  TL + YCK+G+ 
Sbjct: 891 KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNV 950

Query: 594 ATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           A A+    ++E    KL +   N LI  LC++  +  A   + ++  +D
Sbjct: 951 AKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRD 999



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 171/358 (47%), Gaps = 23/358 (6%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A   LLI     +   G   +AF L   M  +G+ P+V+T  +++  L K    +  F  
Sbjct: 110 AVFDLLIRVCLRENMVGDAVEAFRL---MGFRGFSPSVFTCNMVLGSLVKDREVD-LFWS 165

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F K + ++   PNV T+  +++  C+  K   A +LL +M E G  P   TY +L+  +C
Sbjct: 166 FFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYC 225

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G ++ A +L+D M  +G   ++  YN +ID LC+K R  + Y +L++  +  +  ++I
Sbjct: 226 KKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEI 285

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L++  +K+ +   A  +F  M    L P+   Y TLI   C    ++E+ +     
Sbjct: 286 TYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVM 345

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           ++ GL P + TY +++ G  +           +RM   G    +I+Y  +I GLCK   L
Sbjct: 346 VSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLL 405

Query: 559 DEACQFYESMIGKGISPCEVT----------------RV---TLAYEYCKQGDSATAM 597
           +EA Q  + M+   +SP  VT                RV   TL Y YCK G+   A+
Sbjct: 406 EEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEAL 463



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 168/361 (46%), Gaps = 9/361 (2%)

Query: 167  GRLKEGFS-----MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            G LKEG S     M  +M N G+       N ++      G +    ++   M +R +C 
Sbjct: 663  GLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCF 722

Query: 222  DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
            + ++Y +++  Y +   +    +  + M+  G   D  T   LI  +C  G   S+  A 
Sbjct: 723  NLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSG---SLDVAV 779

Query: 282  ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            + L ++  +G+K + +T  VL+  LC++   + AF L +K +      PNV TY ++ +G
Sbjct: 780  KFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDL-VKQLNMLGVTPNVDTYNSLFNG 838

Query: 342  YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            + +    + A  +L  + E G  P    +T+LI G C++GN + A +L D M   G +  
Sbjct: 839  FVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQ 898

Query: 402  IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              A +AII GL +  +  EA  +L    + ++     T+T L+  + K+    +AL L  
Sbjct: 899  GVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRS 958

Query: 462  RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
             M +  +  D+ AY  LI+  C    ++ + K ++E     ++P    Y  +I  +L  G
Sbjct: 959  VMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTG 1018

Query: 522  N 522
            N
Sbjct: 1019 N 1019



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 134/278 (48%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P+V T   ++    K+ +++      + M    + PN  T+  L+   C+ G F+ A 
Sbjct: 140 FSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAG 199

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+  M + G  P    YN +++  CKKGR + A EL+     + + AD  TY +L+ + 
Sbjct: 200 VLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDL 259

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +++ + +   +  RM K  + P+   Y TLI    ++ K+  + K F+E     L P  
Sbjct: 260 CRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNS 319

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY ++I G+  +GNI  A++    M   G  P+ +TYGAL++G+ K ++        E 
Sbjct: 320 VTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLER 379

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           M   G+    ++  T+    CK G    A+ +L+ + K
Sbjct: 380 MRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLK 417



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 178/437 (40%), Gaps = 40/437 (9%)

Query: 192  NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
            N ++ +    G +  A  + DEM       D+ +Y  ++   CR G++  A       ++
Sbjct: 587  NTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIE 646

Query: 252  RGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            +G +  N A  T L+     +G     K A  + E+M+ +G +P+     VL+D   +KG
Sbjct: 647  KGLLSPNPAMYTSLVDGLLKEGHS---KAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKG 703

Query: 311  WTEKAFRLFLKLVRSDN-----------------------------------YKPNVHTY 335
               K   + L  +RS +                                   + P+  T+
Sbjct: 704  KMSKVNDI-LSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTW 762

Query: 336  TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++I GYCK   ++ A   L ++  +G   +  T   L+   C+    + A+DL+  +  
Sbjct: 763  HSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNM 822

Query: 396  EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
             G TPN+  YN++ +G  +     EA  +L    +         +T L+    +    K 
Sbjct: 823  LGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKG 882

Query: 456  ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
            A+ L   M   G++    A + +I    R +K  E+ +     +   + PT  T+T+++ 
Sbjct: 883  AMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMH 942

Query: 516  GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             Y ++GN++ A++    M Q     D   Y  LISGLC    +  A + YE M  + I P
Sbjct: 943  TYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWP 1002

Query: 576  CEVTRVTLAYEYCKQGD 592
                 + L   +   G+
Sbjct: 1003 NTSIYIVLIDSFLCTGN 1019



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 3/258 (1%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN+  +N +++ LC++G+ + A  LL+K  +       +TY  LL+ + K+   K A  
Sbjct: 176 SPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASE 235

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G+  D+  Y  LI   CR+ +  +     +      ++P + TY ++I G +
Sbjct: 236 LIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLV 295

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G I  A K F+ M+     P+++TY  LI G C    ++EA +  + M+  G+ P EV
Sbjct: 296 KEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEV 355

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   L     K         +LE +     ++   +  T+I  LC    +  A      +
Sbjct: 356 TYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDM 415

Query: 636 LGKDQNVDRVSLAALKNA 653
           L    + D V+ + L N 
Sbjct: 416 LKVSVSPDIVTFSVLVNG 433



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 3/276 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   ++ +I    ++  V +A E  +    R       T  ++L   +K  E     
Sbjct: 105 CNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFW 164

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M+   ++P++  +  L+ A C + K K +    ++    G FPT  TY +++  Y
Sbjct: 165 SFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWY 224

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G   +A +    M   G A D  TY  LI  LC++S+  +       M    + P E
Sbjct: 225 CKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNE 284

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK-KLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
           +T  TL     K+G    A  + E +    L   +V  NTLI   CS   +  A      
Sbjct: 285 ITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDV 344

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
           ++      + V+  AL N   +  ++ L S + +R+
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERM 380



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 41/319 (12%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
              ++  + + G L      + ++T  G  +   TLN +V   CE   ++ A ++  ++  
Sbjct: 763  HSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNM 822

Query: 217  RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
             GV  +  +Y  +   + R     EA   L A+L+ G        T LI   C  G   +
Sbjct: 823  LGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMG---N 879

Query: 277  IKQAFELLEEMVRKGWK-----------------------------------PNVYTHTV 301
            +K A EL +EM   G                                     P V T T 
Sbjct: 880  VKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTT 939

Query: 302  LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
            L+   CK+G   KA  L   ++   + K +V  Y  +ISG C +  +  A  L E M+++
Sbjct: 940  LMHTYCKEGNVAKALEL-RSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQR 998

Query: 362  GLLPNTNTYTSLIYGHCKVGNF--ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             + PNT+ Y  LI      GN+  E    L DL  +E  + +++    I++ L    R +
Sbjct: 999  DIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIEILNELLMIARKE 1058

Query: 420  EAYELLKKAFQRELQADKI 438
              +  L    Q     +K+
Sbjct: 1059 LIHTRLTSHEQSPCSQNKV 1077


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 227/493 (46%), Gaps = 30/493 (6%)

Query: 201 LGLVEYAEE-VFDEMC---ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           L L  +A+E +FD +    A G+ A +S++  +V A+   GR  +A +  S M +  +  
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRP 170

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                  ++ A  D G    I  A  L   MV  G  PN  T+ VL+DGLCK+G    A 
Sbjct: 171 TAFVYNTILKALVDSGV---ILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           ++F +++      PNV  YT ++S  C   K++ A  LL  MK++G LP+  TY + + G
Sbjct: 228 KMFDEML-DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CKVG    A+  + ++   G    +  Y+ +IDGL +  R  E +   K   +R +  D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            + YTI++    +    + AL     M K G  PD   Y T++   C    ++ +     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E +   L     T T MICG  + G +  A++ F  M + GC P  +TY ALI G  ++ 
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLA--------------YEYCKQGDSATAMIILES 602
           +L+EA   +  M   G +P    R+TL               ++ C+ G    A  +L S
Sbjct: 467 RLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 603 -LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACY 655
            +D  +   + T NTLI  LC  + +  A   F +L  K  + D ++   L +    A  
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 656 ESNKYALFSDLSQ 668
           E++   LF ++ Q
Sbjct: 586 ENDAMMLFQNILQ 598



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 244/554 (44%), Gaps = 51/554 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +  + G +    ++   M   G     +T N ++   C+ G+   A ++FDEM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----- 269
             RG+  +   Y +++ + C  G++ EA + L +M D+G + D  T    ++  C     
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 270 -----------DKGFRGSIK----------------QAFELLEEMVRKGWKPNVYTHTVL 302
                      D GF   +K                + F   + M+ +   P+V  +T++
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G  + G  E A   FL +++   + P+   Y  ++   C    + RA  L   M +  
Sbjct: 354 IRGCAEAGRIEDALS-FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+ ++ T T +I G CK G  + A  + D MG+ GC P +  YNA+IDG  ++GR++EA 
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEAR 472

Query: 423 ELLKKA---------FQRELQADKI----TYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            L  K           +  L A+++    +   L+ +  +  +  +A  L   ++ +G+ 
Sbjct: 473 MLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVV 532

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y TLI   C+ + +  + + F+E    G+ P + TY ++I G LR    + A+  
Sbjct: 533 PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMML 592

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYC 588
           FQ + Q G +P    Y +++  LC+  KL +A   +   + K  + P E   +  A++  
Sbjct: 593 FQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEI 652

Query: 589 KQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           + G     +  L  +D++    + N     +  LC  +R   A   FH L     ++   
Sbjct: 653 EDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPA 712

Query: 646 SLAALKN-ACYESN 658
             A L N  C++ N
Sbjct: 713 CCALLINYLCWDRN 726



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 130/554 (23%), Positives = 253/554 (45%), Gaps = 58/554 (10%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +++Y V  +SL + G  + A +++  M               +S   ++GR+ E F  ++
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 178 EMTNNGLPLITSTLNRVVGIACEL-GLVEYAEEVFDE-------MCARGVCADASSYKLM 229
            + + G  L       + G +C + GL  +    FDE       M  R +  D   Y +M
Sbjct: 302 MLQDGGFAL------GLKGYSCLIDGL--FQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +      GR+ +A  +L  M  +G + D      ++   CD    G +++A  L  EM++
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQ 410

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
                +  T T++I GLCK+G  ++A ++F ++       P V TY A+I G+ +E ++ 
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 350 RAEMLLERMKEQGLLP--------------NTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A ML  +M E G  P              ++ +   L++  C+ G   +AY L+  +  
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YN +I+GLCK   +  A  L K+   + +  D+ITY  L+   L+      
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKETYTSMI 514
           A+ LF  ++++G +P +  Y +++ + CR KK+ ++   + + +     FP +    +  
Sbjct: 589 AMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANA 648

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM--IGKG 572
              + DG++   V+   +++Q   +  +  Y   + GLC+  + D+A + + ++   G  
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGID 708

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKL--CSEKRVGMA 628
           I+P     + + Y    +  +A   I+L +L K + +     N L+R L  C  ++   A
Sbjct: 709 ITPA-CCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 629 ALFFHKLLGKDQNV 642
             +   L+G D +V
Sbjct: 768 LAWRMHLVGYDMDV 781


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 227/493 (46%), Gaps = 30/493 (6%)

Query: 201 LGLVEYAEE-VFDEMC---ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
           L L  +A+E +FD +    A G+ A +S++  +V A+   GR  +A +  S M +  +  
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRP 170

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
                  ++ A  D G    I  A  L   MV  G  PN  T+ VL+DGLCK+G    A 
Sbjct: 171 TAFVYNTILKALVDSGV---ILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           ++F +++      PNV  YT ++S  C   K++ A  LL  MK++G LP+  TY + + G
Sbjct: 228 KMFDEML-DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            CKVG    A+  + ++   G    +  Y+ +IDGL +  R  E +   K   +R +  D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            + YTI++    +    + AL     M K G  PD   Y T++   C    ++ +     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E +   L     T T MICG  + G +  A++ F  M + GC P  +TY ALI G  ++ 
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLA--------------YEYCKQGDSATAMIILES 602
           +L+EA   +  M   G +P    R+TL               ++ C+ G    A  +L S
Sbjct: 467 RLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 603 -LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN----ACY 655
            +D  +   + T NTLI  LC  + +  A   F +L  K  + D ++   L +    A  
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 656 ESNKYALFSDLSQ 668
           E++   LF ++ Q
Sbjct: 586 ENDAMMLFQNILQ 598



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 244/554 (44%), Gaps = 51/554 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +  + G +    ++   M   G     +T N ++   C+ G+   A ++FDEM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC----- 269
             RG+  +   Y +++ + C  G++ EA + L +M D+G + D  T    ++  C     
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 270 -----------DKGFRGSIK----------------QAFELLEEMVRKGWKPNVYTHTVL 302
                      D GF   +K                + F   + M+ +   P+V  +T++
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G  + G  E A   FL +++   + P+   Y  ++   C    + RA  L   M +  
Sbjct: 354 IRGCAEAGRIEDALS-FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L+ ++ T T +I G CK G  + A  + D MG+ GC P +  YNA+IDG  ++GR++EA 
Sbjct: 413 LVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEAR 472

Query: 423 ELLKKA---------FQRELQADKI----TYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            L  K           +  L A+++    +   L+ +  +  +  +A  L   ++ +G+ 
Sbjct: 473 MLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVV 532

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD+  Y TLI   C+ + +  + + F+E    G+ P + TY ++I G LR    + A+  
Sbjct: 533 PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMML 592

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYC 588
           FQ + Q G +P    Y +++  LC+  KL +A   +   + K  + P E   +  A++  
Sbjct: 593 FQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEI 652

Query: 589 KQGDSATAMIILESLDKKLWIRTVN---TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           + G     +  L  +D++    + N     +  LC  +R   A   FH L     ++   
Sbjct: 653 EDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPA 712

Query: 646 SLAALKN-ACYESN 658
             A L N  C++ N
Sbjct: 713 CCALLINYLCWDRN 726



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/554 (23%), Positives = 252/554 (45%), Gaps = 58/554 (10%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +++Y V  +SL + G  + A +++  M               +S   ++GR+ E F  ++
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 178 EMTNNGLPLITSTLNRVVGIACEL-GLVEYAEEVFDE-------MCARGVCADASSYKLM 229
            + + G  L       + G +C + GL  +    FDE       M  R +  D   Y +M
Sbjct: 302 MLQDGGFAL------GLKGYSCLIDGL--FQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +      GR+ +A  +L  M  +G + D      ++   CD    G +++A  L  EM++
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD---HGDLERAHTLRSEMLQ 410

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
                +  T T++I GLCK+G  ++A ++F ++       P V TY A+I G+ +E ++ 
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 350 RAEMLLERMKEQGLLP--------------NTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A ML  +M E G  P              ++ +   L++  C+ G   +AY L+  +  
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YN +I+GLCK   +  A  L K+   + +  D+ITY  L+   L+      
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKETYTSMI 514
           A+ LF  ++++G +P +  Y +++ + CR KK+ ++   + + +     FP +    +  
Sbjct: 589 AMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANA 648

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM--IGKG 572
              + DG++   V+   +++Q      +  Y   + GLC+  + D+A + + ++   G  
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGID 708

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKL--CSEKRVGMA 628
           I+P     + + Y    +  +A   I+L +L K + +     N L+R L  C  ++   A
Sbjct: 709 ITPA-CCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 629 ALFFHKLLGKDQNV 642
             +   L+G D +V
Sbjct: 768 LAWRMHLVGYDMDV 781


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 209/438 (47%), Gaps = 5/438 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   + S   ++G ++E      +M    +   T + N ++    +LG  +  +  F +M
Sbjct: 27  VFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 86

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G      +Y +M+   C+ G V  A      M  RG I D  T   +I  F   G  
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF---GKV 143

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +       EEM     +P+V T+  LI+  CK G   K    F ++ R +  KPNV +
Sbjct: 144 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR-NGLKPNVVS 202

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ ++  +CKE  M +A      M+  GL+PN  TYTSLI  +CK+GN   A+ L + M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G   N+  Y A+IDGLC      E   LL +  + +++   +T+ +L+    K     
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 455 QALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +A+  F R+    GL  +   YT +I   C+  +++ +   F++    GL P +  YTS+
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + G  + GN+  A+    +M + G   D + Y +L+ GL   ++L +A  F E MIG+GI
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442

Query: 574 SPCEVTRVTLAYEYCKQG 591
            P EV  +++  ++ + G
Sbjct: 443 HPDEVLCISVLKKHYELG 460



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 185/406 (45%), Gaps = 40/406 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  FA++G+         +M   G      T N ++   C+ G VE A  +F+EM  RG
Sbjct: 66  LLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 125

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  M+  + ++GR+ +   +   M D     D  T   LI  FC     G + 
Sbjct: 126 LIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK---FGKLP 182

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +  E   EM R G KPNV +++ L+D  CK+G  ++A + ++ + R     PN +TYT++
Sbjct: 183 KGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSL 241

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM----- 393
           I  YCK   ++ A  L   M + G+  N  TYT+LI G C   N      L+D M     
Sbjct: 242 IDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDI 301

Query: 394 -------------------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
                                             G   N   Y A+IDGLCK  +V+ A 
Sbjct: 302 KVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAAT 361

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L ++  Q+ L  D+  YT L+  + KQ    +AL L  +MV+ G+  D+ AYT+L+   
Sbjct: 362 TLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGL 421

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
               +++++  F +E I  G+ P +    S++  +   G I+ AV+
Sbjct: 422 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVE 467



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 209/454 (46%), Gaps = 10/454 (2%)

Query: 209 EVFDEMCA-RGVCADA-SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +VFD + + R VC      +  +      +G V EA +  S M          +   L+ 
Sbjct: 9   DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLH 68

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            F   G    +K+ F+   +M+  G KP V+T+ ++ID +CK+G  E A  LF ++ +  
Sbjct: 69  KFAKLGKTDGVKRFFK---DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFR 124

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+  TY +MI G+ K  +++      E MK+    P+  TY +LI   CK G   + 
Sbjct: 125 GLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKG 184

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +    M + G  PN+ +Y+ ++D  CK+G +Q+A +      +  L  ++ TYT L+  
Sbjct: 185 LEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 244

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K      A  L   M++ G+  ++  YT LI   C  +   E      E +   +  T
Sbjct: 245 YCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVT 304

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
             T+  +I G  ++  +S A+ YF R+ N  G   +   Y A+I GLCK ++++ A   +
Sbjct: 305 VVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLF 364

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
           E M  KG+ P      +L     KQG+   A+ + + + +   KL +    +L+  L   
Sbjct: 365 EQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHC 424

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
            ++  A  F  +++G+  + D V   ++    YE
Sbjct: 425 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 458



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 3/310 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G+L +G     EM  NGL     + + +V   C+ G+++ A + + +M   G
Sbjct: 171 LINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 230

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++ AYC++G +++A R  + ML  G   +  T T LI   C  G+     
Sbjct: 231 LVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC--GWENPT- 287

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +   LL+EMV    K  V T  VLIDGLCK     KA   F ++      + N   YTAM
Sbjct: 288 EGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAM 347

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A  L E+M ++GL+P+   YTSL+ G+ K GN   A  L D M + G 
Sbjct: 348 IDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++ AY +++ GL    ++Q+A   L++     +  D++    +L +H +     +A+ 
Sbjct: 408 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVE 467

Query: 459 LFCRMVKAGL 468
           L   ++K  L
Sbjct: 468 LQSYLMKHQL 477



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 3/315 (0%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P    + +L      +G  E A      M +    P   + N ++    K G+      
Sbjct: 22  VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
             K       +    TY I++    K+ + + A GLF  M   GL PD   Y ++I  F 
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ ++  FF+E       P   TY ++I  + + G +   +++F+ M + G  P+ +
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +Y  L+   CK+  + +A +FY  M   G+ P E T  +L   YCK G+ + A  +   +
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 604 DK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            +   +  + T   LI  LC  +          +++  D  V  V+   L +   ++   
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 661 ALFSDLSQRIAEGIG 675
           +   D   RI+   G
Sbjct: 322 SKAIDYFGRISNDFG 336


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 231/480 (48%), Gaps = 7/480 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T + VV   C+   +  AE    +M  +G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  Y   G+  EA R    M     + D  TL +L+ + C     G IK
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK---YGKIK 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++ ++++G   KG       LF  L+  D   P+++T++ +
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDIYTFSVL 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TYT++I   C++G  + A +  + M  +G 
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAY+ +I G C  G + +A EL+ +     ++ D + ++ +++   K      A  
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  G +PD   Y+ L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC 584

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA-CQFYE-SMIGKGISPC 576
           + G I   +  F+ M Q G  P  I Y  +I GL    +   A  +F+E +  G  I+ C
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644

Query: 577 EVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               V   +   +  D A  +   L +++ K+ I T+NT+I  +   +RV  A   F  +
Sbjct: 645 TYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 201/421 (47%), Gaps = 4/421 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM  + +     TLN ++G  C+ G ++ A +VFD M  +G
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SYK+M+  Y   G + +       ML  G   D  T ++LI A+ + G    + 
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM---LD 415

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+T +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYHCL 474

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C    + +A+ L+  +   G+  +   ++S+I   CK+G    A ++ DL    G 
Sbjct: 475 IQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQ 534

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ ++DG C  G++++A  +        ++ + + Y  L++ + K     + L 
Sbjct: 535 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLS 594

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M++ G+ P    Y  +I       +   ++  F E   +G+   K TY  ++ G+ 
Sbjct: 595 LFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFF 654

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++     A+  F+ +  +    D IT   +I+G+ +  +++EA   + S+   G+ PC V
Sbjct: 655 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVV 714

Query: 579 T 579
           T
Sbjct: 715 T 715



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 231/507 (45%), Gaps = 28/507 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R ++   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 48  RPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSG-PALAVALFNRAASRAQ 106

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  +D      L+  FC+    
Sbjct: 107 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA--- 163

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 164 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 220

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  YT +I  + KE  +N+A  L + M ++G+ P+  TY+S+++  CK     +A   
Sbjct: 221 PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAF 280

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +G  P+ + YN +I G    G+ +EA  + K+  +  +  D +T  +L+    K
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +Y  ++  +  +  + +    F   +  G+ P   T
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           ++ +I  Y   G +  A+  F  M   G  PD +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVG 626
            +G++P +     L   +C  G    A  +ILE ++  + +  V  +++I  LC   R+ 
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA 653
            A   F   +   Q+ D V  + L + 
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDG 547



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 4/244 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   +++E+ NNG+ L     + ++   C+LG +  A+ +FD    
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 532 VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI---GR 588

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I +   L  EM++KG KP+   + ++IDGL   G T  A   F ++  S     N  TY 
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES-GIAINKCTYN 647

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+ K    + A  L + ++   +  +  T  ++I G  +    E A DL   + + 
Sbjct: 648 IVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 707

Query: 397 GCTP 400
           G  P
Sbjct: 708 GLVP 711



 Score = 42.7 bits (99), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 24/213 (11%)

Query: 133 MRLYIVCATSLISN----GNFERAHEVMQCMVS---------------SFAEIGRLKEGF 173
           MRL IV  +S+I+N    G    A  +    V+                +  +G++++  
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
            +   M + G+         +V   C++G ++    +F EM  +G+      Y +++   
Sbjct: 559 RVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-IKQAFELLEEMVRKGW 292
              GR   A      M + G  ++  T  +++  F    F+     +A  L +E+     
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGF----FKNRCFDEAIFLFKELRAMNV 674

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
           K ++ T   +I G+ +    E+A  LF  + RS
Sbjct: 675 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 707


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 169/313 (53%), Gaps = 1/313 (0%)

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           L EM   G  P+   +T++I G C+ G    A R+  ++V      P+V TY  +++G C
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNGLC 62

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           KE ++  AE LL  M+E+G+ P+  T+T+LI+G+C  G  ++A  L D M  +   P+I 
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN +IDG+C++G + +A +L      RE+  + +TY+IL+  H ++ + + A G    M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  G+ P+I  Y ++I  +CR   + + +KF Q+ +   + P   TY ++I GY+++  +
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A K    M +    PD +TY  LI+G      + EA   +E M  KGI P   T +++
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302

Query: 584 AYEYCKQGDSATA 596
              +   G+S  A
Sbjct: 303 INGHVTAGNSKEA 315



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 4/330 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM   G+  D   Y +++  +CR G +++A R    M+  G + D  T   L+   C + 
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +  A  LL EM  +G  P++ T T LI G C +G  +KA +LF  ++ +   +P++
Sbjct: 66  ---RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML-NQRLRPDI 121

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G C++  +++A  L + M  + + PN  TY+ LI  HC+ G  E A+  +D 
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  PNI  YN+II G C+ G V +  + L+K    ++  D ITY  L+  ++K+ +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A  L   M K  + PD+  Y  LI  F     ++E+   F++    G+ P + TY S
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           MI G++  GN   A +    M Q G APD+
Sbjct: 302 MINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 167/331 (50%), Gaps = 4/331 (1%)

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           +L  M   G + D    T++I  FC  G    +  A  + +EMV  G  P+V T+  L++
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGL---MSDALRVRDEMVGCGCLPDVVTYNTLLN 59

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK+     A  L L  +R     P++ T+T +I GYC E K+++A  L + M  Q L 
Sbjct: 60  GLCKERRLLDAEGL-LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY +LI G C+ G+ ++A DL D M      PN   Y+ +ID  C+KG+V++A+  
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 178

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +   + +  + +TY  ++  + +     +      +M+   ++PD+  Y TLI  + +
Sbjct: 179 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 238

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + KM ++ K         + P   TY  +I G+   GN+  A   F++M   G  PD  T
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y ++I+G        EA Q ++ M+ +G +P
Sbjct: 299 YMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 163/315 (51%), Gaps = 4/315 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+G  C  GL+  A  V DEM   G   D  +Y  ++   C+  R+ +A+  L+ M +RG
Sbjct: 22  VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 81

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D  T T LI  +C     G + +A +L + M+ +  +P++ T+  LIDG+C++G  +
Sbjct: 82  VPPDLCTFTTLIHGYC---IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 138

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA  L+  +  S    PN  TY+ +I  +C++ ++  A   L+ M  +G+LPN  TY S+
Sbjct: 139 KANDLWDDM-HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 197

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+C+ GN  +    +  M     +P++  YN +I G  K+ ++ +A++LL    + ++
Sbjct: 198 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 257

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           Q D +TY +L++        ++A  +F +M   G+ PD + Y ++I         KE+ +
Sbjct: 258 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 317

Query: 494 FFQEAITAGLFPTKE 508
              E +  G  P  +
Sbjct: 318 LHDEMLQRGFAPDDK 332



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 164/314 (52%), Gaps = 6/314 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F   G + +   +  EM   G LP + +    + G+  E  L++ AE + +EM  R
Sbjct: 22  VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD-AEGLLNEMRER 80

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           GV  D  ++  ++  YC  G++ +A +    ML++    D  T   LI   C +   G +
Sbjct: 81  GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ---GDL 137

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A +L ++M  +   PN  T+++LID  C+KG  E AF  FL  + +    PN+ TY +
Sbjct: 138 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG-FLDEMINKGILPNIMTYNS 196

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYC+   +++ +  L++M    + P+  TY +LI+G+ K      A+ L+++M KE 
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  YN +I+G    G VQEA  + +K   + ++ D+ TY  +++ H+    +K+A 
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316

Query: 458 GLFCRMVKAGLNPD 471
            L   M++ G  PD
Sbjct: 317 QLHDEMLQRGFAPD 330



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 141/285 (49%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           +L+ +R     P+   YT +I G+C+   M+ A  + + M   G LP+  TY +L+ G C
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      A  L++ M + G  P++  +  +I G C +G++ +A +L      + L+ D +
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L+    +Q +  +A  L+  M    + P+   Y+ LI + C + +++++  F  E 
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           I  G+ P   TY S+I GY R GN+S   K+ Q+M     +PD ITY  LI G  K+ K+
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            +A +    M  + + P  VT   L   +   G+   A  I E +
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 287


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 39/389 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G    A E++  +  +G  A   +   ++   C  G++ EA R +  ML+RG  +D 
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 523

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI  FC++G    ++  F L EEM ++G +P++YT+  L+ GLC  G  + A +L
Sbjct: 524 ITYNALILGFCNEG---KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 580

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + +  ++     N+HTY  M+ GYCK  ++   E L   +  + +  N+  Y  +I  HC
Sbjct: 581 WDEF-KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 639

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + GN   A  L++ M  +G  PN   Y+++I G+C  G V++A  L+ +           
Sbjct: 640 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE----------- 688

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                                   M K G  P++  YT LI  +C+  +M  +E  + E 
Sbjct: 689 ------------------------MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           I+  + P K TYT MI GY + GN+  A     +M + G  PD +TY  L +G CK + +
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 784

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEY 587
           D A +  + M  +G+   E+T  TL + +
Sbjct: 785 DNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/540 (24%), Positives = 234/540 (43%), Gaps = 39/540 (7%)

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE 154
           L+  Q   +  S+  +A  M  L+FFY+A    KFR  +  Y      LI          
Sbjct: 71  LSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIR--------- 121

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
                 S F    RL     ++I + +  LP        V+ +  E   +E A  +F   
Sbjct: 122 ------SKFIPPARL-----LLIRLIDGNLP--------VLNLDSEKFHIEIANALFGLT 162

Query: 215 CARGVCADASSYKLMVVAYCRMGR---VTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
              G      ++ L++  Y    R    + A      +  +G      T   L+++    
Sbjct: 163 SVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKA 222

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                  + F ++ E    G  P+V++ T +I+ LCK G  E A  LF+K+ +     PN
Sbjct: 223 NEFEKCCEVFRVMSE----GACPDVFSFTNVINALCKGGKMENAIELFMKMEKL-GISPN 277

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY  +I+G C+  +++ A  L E+M  +G+ PN  TY +LI G  K+  F++   ++D
Sbjct: 278 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLD 337

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  PN+  +N +IDG CK G ++ A ++      + +    +T   L+    K  
Sbjct: 338 EMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 397

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           + + A      ++ +GL+       +++   C++ +   + +F +  ++    P+    T
Sbjct: 398 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 457

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++CG  +DG    A + + R+ + G     +T  ALI GLC   KL EA +  + M+ +
Sbjct: 458 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 517

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G+    +T   L   +C +G       + E + K+     I T N L+R LC+  ++  A
Sbjct: 518 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 577



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 220/537 (40%), Gaps = 50/537 (9%)

Query: 120 FYWAIGFAKFRH-----FMRLYIVCATS----LISNGNFERAHEVMQCMVSSFAEIGRLK 170
           F W   F    H     F  L   CA      L   G F  + +    ++SS  +    +
Sbjct: 168 FEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFP-SLKTCNFLLSSLVKANEFE 226

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +   +   M+    P + S  N V+   C+ G +E A E+F +M   G+  +  +Y  ++
Sbjct: 227 KCCEVFRVMSEGACPDVFSFTN-VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCII 285

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C+ GR+  A      M  +G   +  T   LI       F   +     +L+EM+  
Sbjct: 286 NGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNH---VLDEMIGS 342

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+ PNV     LIDG CK G  E A ++   ++ S N  P   T  +++ G+CK +++  
Sbjct: 343 GFNPNVVVFNNLIDGYCKMGNIEGALKI-KDVMISKNITPTSVTLYSLMQGFCKSDQIEH 401

Query: 351 AEMLLERMKEQGL-----------------------------------LPNTNTYTSLIY 375
           AE  LE +   GL                                    P+    T L+ 
Sbjct: 402 AENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVC 461

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G CK G    A +L   + ++G   +    NA+I GLC  G++ EA  ++K+  +R L  
Sbjct: 462 GLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPM 521

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D+ITY  L+     + + +    L   M K G+ PDI+ Y  L+   C   K+ ++ K +
Sbjct: 522 DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLW 581

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            E   +GL     TY  M+ GY +   I      F  +       ++I Y  +I   C+ 
Sbjct: 582 DEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQN 641

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
             +  A Q  E+M  KGI P   T  +L +  C  G    A  +++ + K+ ++  V
Sbjct: 642 GNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 25/349 (7%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  +F  L R   + P++ T   ++S   K  +  +   +   M E G  P+  ++T++I
Sbjct: 193 AVDVFYLLARKGTF-PSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVI 250

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              CK G  E A +L   M K G +PN+  YN II+GLC+ GR+  A+EL +K   + +Q
Sbjct: 251 NALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 310

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY  L++  +K     +   +   M+ +G NP++  +  LI  +C+   ++ + K 
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALISGL 552
               I+  + PT  T  S++ G+ +   I  A    + +   G +  PDN    +++  L
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWL 428

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
           CK+ +   A +F + M+ +   P ++    L    CK G    A         +LW R  
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA--------TELWFRLL 480

Query: 611 ---------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                    T N LI  LC   ++  A+    ++L +   +DR++  AL
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 529


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 183/358 (51%), Gaps = 4/358 (1%)

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L   L++    D  T T+LI A C +   G   QA +LL+EM  +G KP+V T+ VL++G
Sbjct: 4   LDRQLEKECYPDVITYTILIEATCAESGVG---QAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           +CK+G  ++A + FL  + S   +PNV T+  ++   C   +   AE LL  M  +G  P
Sbjct: 61  MCKEGRLDEAIK-FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  T+  LI   C+ G   RA D+++ M   GCTPN  +YN ++ G CK+ ++  A + L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           +    R    D +TY  +L+   K  +   A+ L  ++   G +P +  Y T+I    + 
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K  ++ +   E    GL P   TY+S+I G  R+G +  A+K+F  +   G  P+  TY
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            +++ GLCK  + D A  F   MI KG  P EV+   L      +G +  A+ +L  L
Sbjct: 300 NSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 180/365 (49%), Gaps = 4/365 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           EV D    +    D  +Y +++ A C    V +A + L  M  RG   D  T  +L+   
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +G    + +A + L  M   G +PNV TH +++  +C  G    A +L  ++VR    
Sbjct: 62  CKEG---RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK-GC 117

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+V T+  +I+  C++  + RA  +LE+M   G  PN+ +Y  L++G CK    +RA  
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ 177

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
            +++M   GC P+I  YN ++  LCK G+V  A ELL +   +      ITY  ++    
Sbjct: 178 YLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 237

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  +T QA+ L   M   GL PD+  Y++LIA   R+ K++E+ KFF +    G+ P   
Sbjct: 238 KVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAF 297

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY S++ G  +      A+ +   M   GC P  ++Y  LI G+  +    EA +    +
Sbjct: 298 TYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357

Query: 569 IGKGI 573
             +G+
Sbjct: 358 CSRGV 362



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
           +IT T+  ++   C    V  A ++ DEM +RG   D  +Y ++V   C+ GR+ EA ++
Sbjct: 16  VITYTI--LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           L++M   G+  +  T  +++ + C     G    A +LL EMVRKG  P+V T  +LI+ 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCST---GRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+KG   +A  +  K+  +    PN  +Y  ++ G+CKE+KM+RA   LE M  +G  P
Sbjct: 131 LCRKGLLGRAIDILEKM-PTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  TY +++   CK G  + A +L++ +  +GC+P +  YN +IDGL K G+  +A ELL
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +   + L+ D ITY+ L++   ++ + ++A+  F  +   G+ P+   Y +++   C+ 
Sbjct: 250 HEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKA 309

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++   +  F    I+ G  PT+ +YT +I G   +G    A++    +
Sbjct: 310 QQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 165/320 (51%), Gaps = 1/320 (0%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            E+L+  + K   P+V T+T+LI+  C +    +A +L L  + S   KP+V TY  +++
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKL-LDEMGSRGCKPDVVTYNVLVN 59

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G CKE +++ A   L  M   G  PN  T+  ++   C  G +  A  L+  M ++GC+P
Sbjct: 60  GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++  +N +I+ LC+KG +  A ++L+K        + ++Y  LL    K+ +  +A+   
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV  G  PDI  Y T++ A C+  K+  + +   +  + G  P   TY ++I G  + 
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G    AV+    M   G  PD ITY +LI+GL ++ K++EA +F+  + G G+ P   T 
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299

Query: 581 VTLAYEYCKQGDSATAMIIL 600
            ++ +  CK   +  A+  L
Sbjct: 300 NSIMFGLCKAQQTDRAIDFL 319



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 3/324 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V TYT +I   C E  + +A  LL+ M  +G  P+  TY  L+ G CK G  + A   
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M   G  PN+  +N I+  +C  GR  +A +LL +  ++      +T+ IL++   +
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           +    +A+ +  +M   G  P+  +Y  L+  FC++KKM  + ++ +  ++ G +P   T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y +M+    +DG + +AV+   +++  GC+P  ITY  +I GL K  K D+A +    M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVG 626
           GKG+ P  +T  +L     ++G    A+     +E    K    T N+++  LC  ++  
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 627 MAALFFHKLLGKDQNVDRVSLAAL 650
            A  F   ++ K      VS   L
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTIL 337



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 4/273 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++ EM   G      T N ++   C  GL+  A ++ ++M   G
Sbjct: 92  ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ SY  ++  +C+  ++  A ++L  M+ RG   D  T   ++TA C     G + 
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKD---GKVD 208

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ELL ++  KG  P + T+  +IDGL K G T++A  L  ++ R    KP+V TY+++
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM-RGKGLKPDVITYSSL 267

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G  +E K+  A      ++  G+ PN  TY S+++G CK    +RA D +  M  +GC
Sbjct: 268 IAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGC 327

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            P   +Y  +I+G+  +G  +EA ELL +   R
Sbjct: 328 KPTEVSYTILIEGIANEGLAKEALELLNELCSR 360



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + GRL E    +  M + G      T N ++   C  G    AE++  EM  +G
Sbjct: 57  LVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG 116

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++ +++   CR G +  A   L  M   G   ++ +   L+  FC +     + 
Sbjct: 117 CSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKE---KKMD 173

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A + LE MV +G  P++ T+  ++  LCK G  + A  L  +L  S    P + TY  +
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL-SSKGCSPVLITYNTV 232

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K  K ++A  LL  M+ +GL P+  TY+SLI G  + G  E A      +   G 
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + YN+I+ GLCK  +   A + L     +  +  +++YTIL+     +   K+AL 
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352

Query: 459 LFCRMVKAGL 468
           L   +   G+
Sbjct: 353 LLNELCSRGV 362


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A ++
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCS---RGRVQAALDI 167

Query: 284 LEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  PN YT+  +I G CK G  ++A ++F +++     KP    Y A+I GY
Sbjct: 168 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 227

Query: 343 CKEEKMNRAEMLLERMKE-----------------------------------QGLLPNT 367
           C + K++ A +  +RM E                                   +GL P+ 
Sbjct: 228 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 287

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI GHCK GN ++A ++ + M + G    +  Y A+I  L KKG+VQE  +L  +
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A +R ++ D + Y  L++ H       +A  +   M K  + PD   Y TL+   C   +
Sbjct: 348 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 407

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E    G+ P   TY ++I GY   G++  A++    M   G  P  +TY A
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+  GI+P + T ++L
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +++   C  G      +A ELL +M R    PN  T+  +I G C +G  + A  + 
Sbjct: 116 TFNIMLRHLCSAG---KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 168

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHC 378
            ++       PN +TY  +ISG+CK  +++ A  + + M  +G + P    Y +LI G+C
Sbjct: 169 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 228

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  + A    D M + G    +  YN ++  L   GR  EAYEL+++   + L  D  
Sbjct: 229 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL++ H K+   K+AL +F  M + G+   +  YT LI A  ++ +++E++K F EA
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P    Y ++I  +   GNI  A +    M +   APD++TY  L+ GLC   ++
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 408

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +  + M  +GI P  VT  TL   Y  +GD   A+ I   +  K +   + T N L
Sbjct: 409 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 468

Query: 616 IRKLC 620
           I+ LC
Sbjct: 469 IQGLC 473



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 205/451 (45%), Gaps = 38/451 (8%)

Query: 117 LSFFYWAIGFAKFRHFMRLYI-VCATS-------LISNGNFERAHEVMQCMVSSFAEIGR 168
           LS    A  FA F    RL + +C T+       L S G   RA E+++ M    A    
Sbjct: 90  LSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA---- 145

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG-VCADASSYK 227
                                T N V+   C  G V+ A ++  EM  RG +  +  +Y 
Sbjct: 146 --------------------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 185

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEE 286
            ++  +C++GRV EA +    ML +G +   A +   LI  +CD+G    +  A    + 
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG---KLDTALLYRDR 242

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +G    V T+ +L+  L   G   +A+ L  ++       P+V TY  +I+G+CKE 
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEG 301

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + +A  + E M  +G+     TYT+LIY   K G  +    L D   + G  P++  YN
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 361

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           A+I+     G +  A+E++ +  ++ +  D +TY  L+          +A  L   M + 
Sbjct: 362 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 421

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+  Y TLI+ +  +  +K++ +   E +  G  PT  TY ++I G  ++G    A
Sbjct: 422 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 481

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               + M + G  PD+ TY +LI GL  + +
Sbjct: 482 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 157/336 (46%), Gaps = 17/336 (5%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           FRL L L  +        T+  M+   C   K  RA  LL +M      PN  TY ++I 
Sbjct: 106 FRLRLPLCTT--------TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 376 GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-EL 433
           G C  G  + A D+M ++  + G  PN Y Y  +I G CK GRV EA ++  +   + E+
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + + Y  L+  +  Q +   AL    RMV+ G+   +  Y  L+ A     +  E+ +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL P   TY  +I G+ ++GN+  A++ F+ M++ G     +TY ALI  L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++ E  + ++  + +GI P  V    L   +   G+   A  I+  ++KK       
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           T NTL+R LC   RV  A     ++  +    D V+
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 217/478 (45%), Gaps = 8/478 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +    GR+ +  +++ +M   G        +  +  AC       A  V  ++  RG
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNATLTLLITAFCDKGFRGSI 277
              D  +  L++ A C  G V EA R L  +L   G   D  +   ++   C     G +
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +   +L+EEMV  G  PN+ T + LI  LC+ G  E+   +  ++       P+V  Y  
Sbjct: 237 Q---DLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH-GCAPDVRMYAT 292

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CKEE++  A  +L RM   GL PN   Y +L+ G C    +E A  L+  M  + 
Sbjct: 293 IIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  +   +N ++D LC+ G V    E+L++  +     D ITYT +++   K+    +A+
Sbjct: 353 CPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 412

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   G  P+  +YT ++   C  ++  ++E+   + I  G  P   T+ ++I   
Sbjct: 413 MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL 472

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G +  A++  ++M   GC+PD I+Y  +I GL K    DEA +    M+ KG+SP  
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFF 632
           +   ++A     +G     + + E++ D  +    V  N +I  LC       A  F 
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFL 590



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 192/415 (46%), Gaps = 10/415 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM   +  +  L E      EM   G P    T + ++G  C  GL E   EV  +M   
Sbjct: 228 CMARRWGHVQDLME------EMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH 281

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y  ++   C+  R+  A   L+ M   G   +      L+   C        
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSAD---RW 338

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  LL EM  K    +  T  +L+D LC+ G  ++   +  +++      P+V TYT 
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEH-GCMPDVITYTT 397

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CKE  ++ A MLL  M   G  PNT +YT ++ G C    +  A +LM  M ++G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN   +N +I+ LCKKG V++A ELLK+        D I+Y+ ++    K   T +AL
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   MVK G++P+   Y+++ +A   + ++ +  + F+      +      Y ++I   
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSL 577

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G    A+++   M   GC P+  TY  LI GL  +  + EA +    +  KG
Sbjct: 578 CKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 188/395 (47%), Gaps = 24/395 (6%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L  NG FER HEV                      +M  +G          ++   C+  
Sbjct: 262 LCRNGLFERVHEVHA--------------------QMAEHGCAPDVRMYATIIDGVCKEE 301

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            +E A  + + M + G+  +   Y  ++   C   R  EA+  L+ M D+   LD+ T  
Sbjct: 302 RLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFN 361

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +L+   C  G    + +  E+LE+M+  G  P+V T+T +I+G CK+G  ++A  + L+ 
Sbjct: 362 ILVDFLCQNGL---VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV-MLLRS 417

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +   +PN  +YT ++ G C  E+   AE L+ +M +QG  PN  T+ +LI   CK G 
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E+A +L+  M   GC+P++ +Y+ +IDGL K G   EA ELL    ++ +  + I Y+ 
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           + S    +    + + +F  +    +  D   Y  +I++ C++ +   + +F    +++G
Sbjct: 538 IASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG 597

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
             P + TYT +I G   +G +  A +    +   G
Sbjct: 598 CVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 185/386 (47%), Gaps = 5/386 (1%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-KGFRGSI 277
           V  +A +Y  +V A C  GR+ +A   L  M  RG         + + A C   GFRG++
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
                +L ++  +G   +V    +++  +C +G  ++A RL   L+ S   +P+V +Y A
Sbjct: 167 G----VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNA 222

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G C   +    + L+E M   G  PN  T+++LI   C+ G FER +++   M + G
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG 282

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C P++  Y  IIDG+CK+ R++ A  +L +     L  + + Y  LL         ++A 
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           GL   M       D   +  L+   C+   +    +  ++ +  G  P   TYT++I G+
Sbjct: 343 GLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I  AV   + M   GC P+ ++Y  ++ GLC   +  +A +    MI +G  P  
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
           VT  TL    CK+G    A+ +L+ +
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQM 488



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 199/469 (42%), Gaps = 40/469 (8%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCARGVCADASSYKLMVVAYCRM 236
           ++   G  L     N V+   C+ G V+ A  +  D + + G   D  SY  ++   C  
Sbjct: 171 DLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMA 230

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
            R       +  M+  G   +  T + LI   C  G     ++  E+  +M   G  P+V
Sbjct: 231 RRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL---FERVHEVHAQMAEHGCAPDV 287

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL- 355
             +  +IDG+CK+   E A R  L  + S    PNV  Y  ++ G C  ++   AE LL 
Sbjct: 288 RMYATIIDGVCKEERLEVA-RGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 356 ----------------------------------ERMKEQGLLPNTNTYTSLIYGHCKVG 381
                                             E+M E G +P+  TYT++I G CK G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A  L+  M   GC PN  +Y  ++ GLC   R  +A EL+ +  Q+    + +T+ 
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L++   K+   +QA+ L  +M+  G +PD+ +Y+T+I    +     E+ +     +  
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P    Y+S+      +G I+  ++ F+ +       D + Y A+IS LCK+ + D A
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRA 586

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
            +F   M+  G  P E T   L      +G    A  IL  L  K  +R
Sbjct: 587 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALR 635



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 36/317 (11%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y AM++GYC+  ++  A  L   +    + PN  TY  L+   C  G    A  ++D M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P    Y+  ++  C+    + A  +L+    R    D     ++L     Q    
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 455 QALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           +A+ L   ++ + G  PD+ +Y  ++   C  ++    +   +E + AG  P   T++++
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I    R+G      +   +M + GCAPD   Y  +I G+CK+ +L+ A      M   G+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           SP                                 +   NTL++ LCS  R   A     
Sbjct: 319 SP--------------------------------NVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 634 KLLGKDQNVDRVSLAAL 650
           ++  KD  +D V+   L
Sbjct: 347 EMFDKDCPLDDVTFNIL 363



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 4/197 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  +   ++ +M   G P    T N ++   C+ GLVE A E+  +M   G   D  SY 
Sbjct: 442 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 501

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++    + G   EA   L+ M+ +G   +    + + +A   +G    + Q FE +++ 
Sbjct: 502 TVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDT 561

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +    +   +  +I  LCK+G T++A   FL  + S    PN  TYT +I G   E  
Sbjct: 562 TVRS---DAVLYNAVISSLCKRGETDRAIE-FLAYMVSSGCVPNESTYTILIRGLASEGF 617

Query: 348 MNRAEMLLERMKEQGLL 364
           +  A+ +L  +  +G L
Sbjct: 618 VKEAQEILTELCSKGAL 634


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+ G ++ A E+  +M +RG+  +  SY  +++A+CR   +  A    S ML+
Sbjct: 446 NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLE 505

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQ-AFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           +G   +N T ++LI    D  F+   +Q   E++ +M     + N   +  +I+GLCK G
Sbjct: 506 KGLKPNNYTYSILI----DGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVG 561

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            T KA  L   ++    +  +  +Y ++I G+ KE +M+ A    E M   G+ PN  TY
Sbjct: 562 QTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITY 621

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           TSL+ G CK    ++A ++ D M  +G   +I AY A+I G CKK  ++ A  L  +  +
Sbjct: 622 TSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLE 681

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L   +  Y  L+S          AL L+ +M+K GL  D+  YTTLI    ++  +  
Sbjct: 682 EGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLIL 741

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   + E    GL P +  YT ++ G  + G     VK F+ M +    P+ + Y A+I+
Sbjct: 742 ASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 801

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
           G  ++  LDEA + ++ M+ KGI P
Sbjct: 802 GHYREGNLDEAFRLHDEMLDKGILP 826



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 234/533 (43%), Gaps = 45/533 (8%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        +++++++  +      +V +M   G+      +NR +    +   +  A+
Sbjct: 158 FEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAK 217

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E++  M A GV  D  + +L++ A  R  +  EA    S  ++RGA  D+   +L + A 
Sbjct: 218 ELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQAC 277

Query: 269 CDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           C      ++  A  LL EM  K    P+  T+T +I    K+G  E A R   ++V SD 
Sbjct: 278 CKT---LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMV-SDG 333

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              NV   T++I+G+CK   +  A  L  +M+ +G  PN+ T++ LI    K G  E+A 
Sbjct: 334 ISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKAL 393

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +    M   G TP+++  + II G  K  + +EA +L  ++F+  L    I  TI LS  
Sbjct: 394 EFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTI-LSWL 452

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            KQ +  +A  L  +M   G+ P++ +Y  ++ A CR+K M  +   F   +  GL P  
Sbjct: 453 CKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNN 512

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC-------------- 553
            TY+ +I G  ++ +  + ++   +M       + + Y  +I+GLC              
Sbjct: 513 YTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 572

Query: 554 ----------------------KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
                                 K+ ++D A   YE M   GISP  +T  +L    CK  
Sbjct: 573 MIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNN 632

Query: 592 DSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
               A+ + + +     KL I     LI   C +  +  A+  F +LL +  N
Sbjct: 633 RMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLN 685



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 207/487 (42%), Gaps = 76/487 (15%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   V+  + + G +E A    DEM + G+  +  +   ++  +C+   +  A      M
Sbjct: 305 TYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM 364

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY-THTVL------ 302
            + G   ++ T ++LI  F   G    +++A E  ++M   G  P+V+  HT++      
Sbjct: 365 ENEGPSPNSVTFSVLIERFSKNG---EMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKG 421

Query: 303 ---------------------------IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                                      +  LCK+G  +KA  L  K+  S    PNV +Y
Sbjct: 422 QKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKM-ESRGIGPNVVSY 480

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT------------------------ 371
             ++  +C+++ M+ A  +   M E+GL PN  TY+                        
Sbjct: 481 NNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTS 540

Query: 372 -----------SLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAIIDGLCKKGRV 418
                      ++I G CKVG   +A +L+  M +E   C  +  +YN+IIDG  K+G +
Sbjct: 541 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEM 599

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A    ++     +  + ITYT L+    K     QAL +   M   G+  DI AY  L
Sbjct: 600 DYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 659

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  FC++  M+ +   F E +  GL P++  Y S+I G+   GN+ +A+  +++M + G 
Sbjct: 660 IHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGL 719

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             D  TY  LI GL K+  L  A   Y  M   G+ P E+    +     K+G     + 
Sbjct: 720 RCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVK 779

Query: 599 ILESLDK 605
           + E + K
Sbjct: 780 MFEEMKK 786



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 185/413 (44%), Gaps = 21/413 (5%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI----LDNATLTLLITAFCDKGF 273
           G   ++ ++  ++ AY +  +   A   ++ ML+ G I      N TL+ L+        
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQ------- 209

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R SI +A EL   MV  G   +  T  +L+    ++    +A  +F + +     +P+  
Sbjct: 210 RNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIER-GAEPDSL 268

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            Y+  +   CK   +  A  LL  MKE+ L +P+  TYTS+I    K GN E A    D 
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE 328

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G + N+ A  ++I G CK   +  A +L  K        + +T+++L+    K  E
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGE 388

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK--ETY 510
            ++AL  + +M   GL P +    T+I  + + +K +E+ K F E+   GL       T 
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTI 448

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S +C   + G I  A +  ++M   G  P+ ++Y  ++   C++  +D A   + +M+ 
Sbjct: 449 LSWLC---KQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLE 505

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLC 620
           KG+ P   T   L     K  D    + ++  +    + +  V   T+I  LC
Sbjct: 506 KGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLC 558



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 159/332 (47%), Gaps = 5/332 (1%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           F++     ++   + +++ N E    V Q +++   ++G+  +   ++  M       ++
Sbjct: 523 FKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVS 582

Query: 189 -STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             + N ++    + G ++YA   ++EMCA G+  +  +Y  ++   C+  R+ +A     
Sbjct: 583 CMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRD 642

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M ++G  LD      LI  FC K    +++ A  L  E++ +G  P+   +  LI G  
Sbjct: 643 EMKNKGVKLDIPAYGALIHGFCKKS---NMESASALFSELLEEGLNPSQPVYNSLISGFR 699

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
             G    A  L+ K+++ D  + ++ TYT +I G  KE  +  A  L   M+  GL+P+ 
Sbjct: 700 NLGNMVAALDLYKKMLK-DGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDE 758

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             YT ++ G  K G F +   + + M K   TPN+  YNA+I G  ++G + EA+ L  +
Sbjct: 759 IMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 818

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGL 459
              + +  D  T+ IL+S  + + +  +A  L
Sbjct: 819 MLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 4/268 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L++  K  G   N+  +  L+  + K    + A D+++ M + G  P +   N  +  L 
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALV 208

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++  + EA EL  +     +  D  T  +L+   L++ +  +AL +F R ++ G  PD  
Sbjct: 209 QRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSL 268

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKETYTSMICGYLRDGNISSAVKYFQR 532
            Y+  + A C+   +  +    +E     L  P++ETYTS+I   ++ GN+  A+++   
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE 328

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G + + +   +LI+G CK + L  A   +  M  +G SP  VT   L   + K G+
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGE 388

Query: 593 SATAMII---LESLDKKLWIRTVNTLIR 617
              A+     +ESL     +  V+T+I+
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQ 416


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 39/389 (10%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G    A E++  +  +G  A   +   ++   C  G++ EA R +  ML+RG  +D 
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 500

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   LI  FC++G    ++  F L EEM ++G +P++YT+  L+ GLC  G  + A +L
Sbjct: 501 ITYNALILGFCNEG---KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + +  ++     N+HTY  M+ GYCK  ++   E L   +  + +  N+  Y  +I  HC
Sbjct: 558 WDEF-KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 616

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + GN   A  L++ M  +G  PN   Y+++I G+C  G V++A  L+ +           
Sbjct: 617 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE----------- 665

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                                   M K G  P++  YT LI  +C+  +M  +E  + E 
Sbjct: 666 ------------------------MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           I+  + P K TYT MI GY + GN+  A     +M + G  PD +TY  L +G CK + +
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 761

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEY 587
           D A +  + M  +G+   E+T  TL + +
Sbjct: 762 DNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 199/469 (42%), Gaps = 40/469 (8%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M+    P + S  N V+   C+ G +E A E+F +M   G+  +  +Y  ++   C+ GR
Sbjct: 212 MSEGACPDVFSFTN-VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A      M  +G   +  T   LI       F   +     +L+EM+  G+ PNV  
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNH---ILDEMIGAGFNPNVVV 327

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
              LIDG CK G  E A ++   ++ S N  P   T  +++ G+CK +++  AE  LE +
Sbjct: 328 FNNLIDGYCKMGNIEGALKI-KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 386

Query: 359 KEQGL-----------------------------------LPNTNTYTSLIYGHCKVGNF 383
              GL                                    P+    T L+ G CK G  
Sbjct: 387 LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 446

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A +L   + ++G   +    NA+I GLC  G++ EA  ++K+  +R L  D+ITY  L
Sbjct: 447 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +     + + +    L   M K G+ PDI+ Y  L+   C   K+ ++ K + E   +GL
Sbjct: 507 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
                TY  M+ GY +   I      F  +       ++I Y  +I   C+   +  A Q
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 626

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
             E+M  KGI P   T  +L +  C  G    A  +++ + K+ ++  V
Sbjct: 627 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 171/345 (49%), Gaps = 4/345 (1%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           ++ +G  P+V++ T +I+ LCK G  E A  LF+K+ +     PNV TY  +I+G C+  
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKL-GISPNVVTYNCIINGLCQNG 269

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  L E+M  +G+ PN  TY +LI G  K+  F++   ++D M   G  PN+  +N
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFN 329

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG CK G ++ A ++      + +    +T   L+    K  + + A      ++ +
Sbjct: 330 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 389

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GL+       +++   C++ +   + +F +  ++    P+    T ++CG  +DG    A
Sbjct: 390 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 449

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            + + R+ + G     +T  ALI GLC   KL EA +  + M+ +G+    +T   L   
Sbjct: 450 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 509

Query: 587 YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           +C +G       + E + K+     I T N L+R LC+  ++  A
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 159/349 (45%), Gaps = 25/349 (7%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  +F  L R   + P++ T    +S   K  +  +   +   M E G  P+  ++T++I
Sbjct: 170 AVDVFYLLARKGTF-PSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVI 227

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              CK G  E A +L   M K G +PN+  YN II+GLC+ GR+  A+EL +K   + +Q
Sbjct: 228 NALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 287

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY  L++  +K     +   +   M+ AG NP++  +  LI  +C+   ++ + K 
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA--PDNITYGALISGL 552
               I+  + PT  T  S++ G+ +   I  A    + +   G +  PDN    +++  L
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWL 405

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
           CK+ +   A +F + M+ +   P ++    L    CK G    A         +LW R  
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA--------TELWFRLL 457

Query: 611 ---------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                    T N LI  LC   ++  A+    ++L +   +DR++  AL
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 226/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T + VV   C+   ++ AE    +M  +G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  Y   G+  EA R    M  +  + D   L  L+ + C  G    IK
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG---KIK 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++T++++G   KG       LF  L+  D   P+++T+  +
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDIYTFNVL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAY+ +I G C  G + +A EL+ +     ++ D + +  +++   K      A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+PD   Y  L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+  + 
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 579 TRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   +     K      A+ +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+     T N ++      G+++ A  +F+EM   G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  ++ A CR+G++ +A    + M+D+G + D      LI  FC     GS+ 
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT---HGSLL 483

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G + ++     +I+ LCK G    A  +F  L  +    P+   Y  +
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNML 542

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M ++G 
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN IIDGL + GR   A     +  +  +  +K TY+I+L    K     +A+ 
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  DI    T+IA   + ++++E++  F     +GL P   TY+ MI   L
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLL 722

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC PD+     ++  L K++++  A  +   +  +  S   +
Sbjct: 723 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 782

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 783 TAMLLVDLFSSKG 795



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 234/543 (43%), Gaps = 86/543 (15%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTL 263
           E A   F ++   G+  DA     ++  +C   R  EA D  L    + G + D  +  +
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           L+ + C++G  G   QA +LL  M   G    P+V  +  +IDG  K+G   KA  LF +
Sbjct: 190 LLKSLCNQGKSG---QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 246

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +V+     P++ TY++++   CK   M++AE  L +M  +G+LP+  TY +LIYG+   G
Sbjct: 247 MVQR-GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
            ++ A  +   M ++   P++ A N ++  LCK G+++EA ++      +    D  +YT
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIH---------------------------- 473
           I+L+ +  +        LF  M+  G+ PDI+                            
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425

Query: 474 -------AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN---- 522
                   Y T+IAA CR  KM ++ + F + I  G+ P K  Y  +I G+   G+    
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485

Query: 523 -------------------------------ISSAVKYFQRMNQIGCAPDNITYGALISG 551
                                          +  A   F     +G  PD + Y  L+ G
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIR 610
            C   K+++A + +++M+  GI P  V   TL   YCK G     + +  E L K +   
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605

Query: 611 TV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALF 663
           T+  N +I  L    R   A + FH++      +++ + + +     KN C++   + LF
Sbjct: 606 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF-LF 664

Query: 664 SDL 666
            +L
Sbjct: 665 KEL 667



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 203/483 (42%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM    +      LN ++G  C+ G ++ A +VFD M  +G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G   D  T  +LI A+ + G    + 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM---LD 413

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI-DQGVVPDKYAYHCL 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y  L+ G+C VG  E+A  + D M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  Q+ ++   I Y I++    +   T  A   F  M ++G+  +   Y+ ++    
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 652

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++ G  P  +
Sbjct: 653 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAV 712

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 713 TYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772

Query: 604 DKK 606
           D++
Sbjct: 773 DER 775



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 217/479 (45%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 46  RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSG-PALAVALFNRAASRAQ 104

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  +D    + L+  FC+    
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA--- 161

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++ +L+  LC +G + +A  L   +        
Sbjct: 162 ---KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCS 218

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY+S+++  CK    ++A   
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +G  P+ + YN +I G    G+ +EA  + K+  ++ +  D +    L+    K
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +YT ++  +  +  + +    F   +  G+ P   T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 398

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  P  +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G+ P +     L   +C  G    A  +I E ++  + +  V   ++I  LC   RV
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L       ++   C+LG V  A+ +FD    
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI---GR 586

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM++KG KP+   + ++IDGL + G T                        
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K ++ T   MI+G  +  ++  A+ L   +   
Sbjct: 647 VLRGLFKNRCFDEAIFLF-KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL+P   TY+ +I    K G  E A D+   M   GC P+    N ++  L KK  +  A
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 6/266 (2%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           G    +P  Y Y  ++D   +  R + A     +  +  L+ D I  + LL    +   T
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 454 KQALG-LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF--PTKETY 510
            +AL  L  R  + G  PD+ +Y  L+ + C Q K  +++   +     G    P    Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I G+ ++G+++ A   F+ M Q G  PD +TY +++  LCK   +D+A  F   M+ 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGM 627
           KG+ P   T   L Y Y   G    A+ + + + ++  +  V   NTL+  LC   ++  
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
           A   F  +  K QN D  S   + N 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNG 370


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 8/415 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGR-VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           G   D  SY  ++    R GR +  A      MLD+G   D  T   +I+A        +
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKAR---A 253

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  +L  MV+ G  PN  TH  L+ G C  G    A  +F ++ R D  +P+V TY 
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCR-DGVEPDVFTYN 312

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++   CK  +   A  + + M ++G  PN+ TY +L++G+   G+  + + L+D+M + 
Sbjct: 313 TLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRN 372

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ Y +N +I    K G+V +A  L  K  ++ L  D +TY I++       +   A
Sbjct: 373 GIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDA 432

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +  F R++  GL PD   +  LI   C + K  ++E+   E I  G+ P    + +++  
Sbjct: 433 MAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNH 492

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             ++G ++ A   F  M ++    D ITY  LI G C   K+DEA +  E M+  G+ P 
Sbjct: 493 LCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMA 628
           EVT  T+   YCK G    A  +   +  K     I T +T+++ L   +R   A
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 230/486 (47%), Gaps = 10/486 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +   G+  +   +   M  +G+     T N ++G  C+ G    A ++FD M  RG
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++++Y  ++  Y   G + +    L  M+  G   D+    +LI  +      G + 
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK---HGKVD 395

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L  +M R+G  P+  T+ +++D LC  G  + A   F +L+ S+   P+   +  +
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI-SEGLTPDAVVFRNL 454

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C  +K ++AE L   M  +G+ PN   + +L+   CK G   RA ++ DLM +   
Sbjct: 455 IHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDV 514

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++  YN +IDG C  G+V EA +LL+      ++ +++TY  +++ + K    + A  
Sbjct: 515 QRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFS 574

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +M   G+NP I  Y+T++    + ++   +++ +   I +G+     TY  ++ G  
Sbjct: 575 LFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLC 634

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++     A++ FQ +  I    +N T+  +I  L K  + DEA   + S++ +G+ P  V
Sbjct: 635 QNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 694

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   +     +QG       +  SL+K       R +N L+ KL  +  V  A ++  K+
Sbjct: 695 TYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKI 754

Query: 636 LGKDQN 641
              D+N
Sbjct: 755 ---DEN 757



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 225/503 (44%), Gaps = 43/503 (8%)

Query: 175 MVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           MV + T  G P    + N V+ G+  E   ++ A  +FD+M  +G+  D  +Y  ++ A 
Sbjct: 189 MVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISAL 248

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
            +   + +A   L  M+  GA+ +  T   L+  +C     G    A  + + M R G +
Sbjct: 249 SKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSS---GKPNDAIGVFKRMCRDGVE 305

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC---------- 343
           P+V+T+  L+  LCK G + +A ++F  +V+   +KPN  TY  ++ GY           
Sbjct: 306 PDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR-GHKPNSATYGTLLHGYATEGSLVKMHH 364

Query: 344 -------------------------KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
                                    K  K++ A +L  +M+ QGL P+T TY  ++   C
Sbjct: 365 LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC 424

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG  + A      +  EG TP+   +  +I GLC + +  +A EL  +   R +  + I
Sbjct: 425 MVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            +  LL+   K+    +A  +F  MV+  +  D+  Y TLI  +C   K+ E+ K  +  
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P + TY +MI GY ++G I  A   F++M   G  P  +TY  ++ GL +  + 
Sbjct: 545 VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRT 604

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTL 615
             A + Y  MI  GI     T   +    C+   +  A+ I ++L   D  L  RT N +
Sbjct: 605 AAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIM 664

Query: 616 IRKLCSEKRVGMAALFFHKLLGK 638
           I  L    R   A   F  LL +
Sbjct: 665 IDALLKGGRHDEAKDLFASLLAR 687



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 227/510 (44%), Gaps = 55/510 (10%)

Query: 214 MCARG-VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           M AR  V  +  +Y +++    R+G +  A   L  ++  G   +  T + L+ A CDK 
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDK- 139

Query: 273 FRGSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                K+  E ++  +R+    G  PNV+++T+L+ GLC +  +++A  L   ++ +D+ 
Sbjct: 140 -----KRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDT 194

Query: 329 K----------------------------------------PNVHTYTAMISGYCKEEKM 348
           +                                        P+V TY ++IS   K   M
Sbjct: 195 RGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAM 254

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           ++A ++L RM + G +PN  T+ SL++G+C  G    A  +   M ++G  P+++ YN +
Sbjct: 255 DKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTL 314

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +  LCK GR  EA ++     +R  + +  TY  LL  +  +    +   L   MV+ G+
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PD + +  LI  + +  K+ ++   F +    GL P   TY  ++      G +  A+ 
Sbjct: 375 QPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F R+   G  PD + +  LI GLC + K D+A +    MIG+GI P  +   TL    C
Sbjct: 435 QFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLC 494

Query: 589 KQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           K+G  A A  I +    +D +  + T NTLI   C   +V  AA     ++      + V
Sbjct: 495 KEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554

Query: 646 SLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           +   + N  C        FS   Q  ++G+
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGV 584



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 188/460 (40%), Gaps = 84/460 (18%)

Query: 274 RGSIKQAFELLEEMV---RKGWKPNVYTHTVLID-------------------------- 304
           R S   A  L   MV   R    PN+ T++V+ID                          
Sbjct: 66  RHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAE 125

Query: 305 ---------GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
                     LC K  T +A  + L+ +      PNV +YT ++ G C E +  +A  LL
Sbjct: 126 AITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLL 185

Query: 356 ERM-----KEQGLLPNTNTYTSLIYGHCKVG-NFERAYDLMDLMGKEGCTPNIYAYNAII 409
             M        G  P+  +Y ++I G  + G   + AY L D M  +G +P++  YN+II
Sbjct: 186 HTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSII 245

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             L K   + +A  +L +  +     ++IT+  LL  +    +   A+G+F RM + G+ 
Sbjct: 246 SALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVE 305

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG------------- 516
           PD+  Y TL+   C+  +  E+ K F   +  G  P   TY +++ G             
Sbjct: 306 PDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHL 365

Query: 517 ----------------------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
                                 Y + G +  A+  F +M + G  PD +TYG ++  LC 
Sbjct: 366 LDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCM 425

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLWIRTV 612
             K+D+A   +  +I +G++P  V    L +  C +   D A  + + E + + +    +
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV-EMIGRGICPNNI 484

Query: 613 --NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             NTL+  LC E  V  A   F  ++  D   D ++   L
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTL 524


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 198/372 (53%), Gaps = 17/372 (4%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + GV  +  +  +++ ++C + RV  A   L+ +L  G   D  T T LI   C   
Sbjct: 70  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC--- 126

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +A  L ++M+ +G++PNV T+  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 127 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL-LRSMEQGNCQPDV 185

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             YT++I   CK+ ++  A  L  +M  QG+ P+  TYTSL++  C +  ++    L++ 
Sbjct: 186 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 245

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M      P++  ++ ++D LCK+G+V EA+E++    QR ++ D +TYT L+  H  Q+E
Sbjct: 246 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 305

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ +F  MV+ G  PD+ +YTTLI A    KK        QE I  GL   KET  +
Sbjct: 306 MDEAVKVFDMMVRKGFAPDVISYTTLINA---GKKDGGGLVSLQEVI--GL--VKETPDA 358

Query: 513 MICG---YLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGLCKQSKLDEACQFYE 566
           +  G    +R   +    K    +N++      P+ + +  ++  LCK+ K+ EA    +
Sbjct: 359 VKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVD 418

Query: 567 SMIGKGISPCEV 578
            MI +G+ P  V
Sbjct: 419 MMIKRGVEPNAV 430



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 1/272 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  PNVYT  +LI+  C       AF +  K+++   ++P+  T+T +I
Sbjct: 64  VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL-GHQPDPTTFTTLI 122

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+  A  L ++M ++G  PN  TY +LI G CKVGN   A  L+  M +  C 
Sbjct: 123 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 182

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V EA+ L  +   + +  D  TYT L+       E K    L
Sbjct: 183 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 242

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +MV + + PD+  ++T++ A C++ K+ E+ +     I  G+ P   TYT+++ G+  
Sbjct: 243 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 302

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              +  AVK F  M + G APD I+Y  LI+ 
Sbjct: 303 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINA 334



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 135/262 (51%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV+T   +I+ +C   ++  A  +L ++ + G  P+  T+T+LI G C  G    A  L
Sbjct: 78  PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 137

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            D M  EG  PN+  Y  +I+GLCK G    A  LL+   Q   Q D + YT ++    K
Sbjct: 138 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 197

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +  +A  LF +MV  G++PDI  YT+L+ A C   + K       + + + + P    
Sbjct: 198 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 257

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +++++    ++G ++ A +    M Q G  PD +TY  L+ G C QS++DEA + ++ M+
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 317

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            KG +P  ++  TL     K G
Sbjct: 318 RKGFAPDVISYTTLINAGKKDG 339



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 190/407 (46%), Gaps = 22/407 (5%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV 176
           + F       AK +H+  + +  +T + S G     +  +  +++SF  + R+   FS++
Sbjct: 46  VDFAKLLTSIAKMKHYSTV-LSLSTQMDSFGVPPNVY-TLNILINSFCHLNRVGFAFSVL 103

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            ++   G     +T   ++   C  G +  A  +FD+M   G   +  +Y  ++   C++
Sbjct: 104 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 163

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G  + A R L +M       D    T +I + C       + +AF L  +MV +G  P++
Sbjct: 164 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD---RQVTEAFNLFSQMVGQGISPDI 220

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           +T+T L+  LC     +    L  ++V S    P+V  ++ ++   CKE K+  A  +++
Sbjct: 221 FTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVDALCKEGKVTEAHEIVD 279

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M ++G+ P+  TYT+L+ GHC     + A  + D+M ++G  P++ +Y  +I+   K G
Sbjct: 280 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339

Query: 417 ----RVQEAYELLKKAFQRELQADKI---TYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
                +QE   L+K+        D +      ++  + +K  E  +   L   MV + + 
Sbjct: 340 GGLVSLQEVIGLVKET------PDAVKGGAVEVIRKDKMKLFEKGRT--LLNEMVNSKIM 391

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK-ETYTSMIC 515
           P++  ++T++ A C++ K+ E+       I  G+ P   + + +M C
Sbjct: 392 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTMKC 438



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 140/308 (45%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++  +  +++   K +  +    L  +M   G+ PN  T   LI   C +     A+ +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  + K G  P+   +  +I GLC +G++ EA  L  K      Q + +TY  L++   K
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              T  A+ L   M +    PD+  YT++I + C+ +++ E+   F + +  G+ P   T
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YTS++                 +M      PD + +  ++  LCK+ K+ EA +  + MI
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
            +G+ P  VT  TL   +C Q +   A+ + + + +K +   V +    + + K+ G   
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGL 342

Query: 630 LFFHKLLG 637
           +   +++G
Sbjct: 343 VSLQEVIG 350



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 39/297 (13%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   +  L+    K+ ++     L   M   G  PN+Y  N +I+  C   RV  A+ +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L K  +   Q D  T+T L+     + +  +AL LF +M+  G  P++  Y TLI   C+
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
                                               GN S+A++  + M Q  C PD + 
Sbjct: 163 V-----------------------------------GNTSAAIRLLRSMEQGNCQPDVVI 187

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL- 603
           Y ++I  LCK  ++ EA   +  M+G+GISP   T  +L +  C   +      +L  + 
Sbjct: 188 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 247

Query: 604 DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYES 657
           + K+    V  +T++  LC E +V  A      ++ +    D V+   L +  C +S
Sbjct: 248 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 304



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 3/202 (1%)

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL  F R++     P I  +  L+ +  + K          +  + G+ P   T   +I
Sbjct: 28  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 87

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +     +  A     ++ ++G  PD  T+  LI GLC + K+ EA   ++ MI +G  
Sbjct: 88  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 147

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL    CK G+++ A+ +L S+++   +  +    ++I  LC +++V  A   
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 207

Query: 632 FHKLLGKDQNVDRVSLAALKNA 653
           F +++G+  + D  +  +L +A
Sbjct: 208 FSQMVGQGISPDIFTYTSLVHA 229


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 197/394 (50%), Gaps = 13/394 (3%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM---GRVTE 241
           PL  S    VV   C+ G V+ A  + D+M   GV  +A  Y  ++  Y R    GRV E
Sbjct: 177 PLAASV---VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 233

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
               L  M + G      T T+L+ +         I +   L  EM       +VY +T 
Sbjct: 234 ---ILEIMENEGIEATVGTYTILVDSLSTAR---DISKVEALFNEMKANNVVGDVYLYTA 287

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I+  C+ G   +A ++  + V  +  +PN  TY  +I+G+CK  +M  AEMLL  M+ Q
Sbjct: 288 VINAYCRAGNMRRAAKVLDECV-GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 346

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G+  N   + ++I G+C+ G  + A  +   M K G   +IY YN +  GLC+  R+ EA
Sbjct: 347 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             LL    +  +  + +TYT L+S H K  +  +A  LF  M + G  P +  Y  +I  
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           + ++  ++E+E+F +E    G  P   TY S++ G+  +G +  A+K F+ M Q G  P+
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 526

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            + Y ALISGL K+ + + A Q Y+ M+  G+ P
Sbjct: 527 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIP 560



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 188/382 (49%), Gaps = 4/382 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V   C+ GRV +A R L  M   G  L+      L+  +  +   G +++  E++E  
Sbjct: 182 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN- 240

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G +  V T+T+L+D L       K   LF ++ +++N   +V+ YTA+I+ YC+   
Sbjct: 241 --EGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCRAGN 297

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M RA  +L+     G+ PN  TY  LI G CK+G  E A  L+  M  +G   N   +N 
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +IDG C+KG V +A ++     +  ++ D  TY  L     +     +A  L   M++ G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + P+   YTTLI+  C+   M E+ + F+E    G  P+  TY  MI GY + G+I  A 
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           ++ + M + G  PD  TY +L+ G C   K+D A + +E M  +G  P  V    L    
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 537

Query: 588 CKQGDSATAMIILESLDKKLWI 609
            K+G S  A  + + + K   I
Sbjct: 538 AKEGRSEAAFQLYDDMLKAGLI 559



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 7/401 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           ++++   C  G    +  A  LL++M R G   N   +  L+D   ++   +   +  L+
Sbjct: 181 SVVVDGLCKSG---RVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQ-KDDGRVQEILE 236

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++ ++  +  V TYT ++        +++ E L   MK   ++ +   YT++I  +C+ G
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N  RA  ++D     G  PN   Y  +I+G CK G+++ A  LL     + +  ++I + 
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            ++  + ++     AL +   M K G+  DI+ Y TL    CR  ++ E++      I  
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P   TYT++I  + +DG++  A + F+ M + G  P  +TY  +I G  K+  + EA
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRK 618
            +F + M  KG  P   T  +L + +C  G    A+ + E + ++     V     LI  
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           L  E R   A   +  +L      D    +AL  + +  N+
Sbjct: 537 LAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 189/401 (47%), Gaps = 4/401 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR+ +   ++ +M  +G+ L     N ++            +E+ + M   G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A   +Y ++V +      +++ +   + M     + D    T +I A+C  G   +++
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG---NMR 299

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L+E V  G +PN  T+ VLI+G CK G  E A  + L  ++      N   +  M
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAA-EMLLADMQGQGVGLNQIIFNTM 358

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYC++  ++ A  +   M++ G+  +  TY +L  G C+V   + A  L+ +M + G 
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 418

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  +I   CK G + EA  L ++  ++      +TY +++  + K+   ++A  
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M K G  PD++ Y +L+   C   K+  + K F+E    G  P    YT++I G  
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           ++G   +A + +  M + G  PD+  Y AL+  L   ++ D
Sbjct: 539 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 23/372 (6%)

Query: 130 RHFMRLYIVCATSLIS-------NGNFERAHEVMQ------------CMVSSFAEIGRLK 170
           RH + L  +C  SL+        +G  +   E+M+             +V S +    + 
Sbjct: 205 RHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDIS 264

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           +  ++  EM  N +         V+   C  G +  A +V DE    GV  +  +Y +++
Sbjct: 265 KVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLI 324

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
             +C++G++  A+  L+ M  +G  L+      +I  +C KG    +  A ++   M + 
Sbjct: 325 NGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGM---VDDALKIKAAMEKM 381

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G + ++YT+  L  GLC+    ++A +  L ++      PN  TYT +IS +CK+  M  
Sbjct: 382 GVELDIYTYNTLACGLCRVNRLDEA-KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVE 440

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L   M E+G  P+  TY  +I G+ K G+   A      M K+G  P++Y Y +++ 
Sbjct: 441 ARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVH 500

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G C  G+V  A +L ++  QR  + + + YT L+S   K+  ++ A  L+  M+KAGL P
Sbjct: 501 GHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIP 560

Query: 471 DIHAYTTLIAAF 482
           D   Y+ L+ + 
Sbjct: 561 DDSLYSALVGSL 572


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 223/483 (46%), Gaps = 8/483 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  ++ +GR KE   M  EMT  GL     T N ++   C+    + A E+F  +  +G
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +++  Y   GR  + +    +M D G + D+    +LI A      RG + 
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAK---RGMMD 464

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM  +G  PNV T+  +I  LC+ G    A     +++ S   KPN   Y ++
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI-SIGLKPNTVVYHSL 523

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           I G+C    + +A+ L+  M +QG+  PN   ++S+I+  C  G    A D+ +L+   G
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I+ +N++IDG C  G++ +A+ +L        + D +TY+ L++ + K       L
Sbjct: 584 DRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M+   + P    Y+ ++    R  +   ++K F E I +G   +  TYT ++ G 
Sbjct: 644 ILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGL 703

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R+     A+  F ++  +    +      +I  L K  + +EA   + S+   G+ P  
Sbjct: 704 CRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNA 763

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHK 634
            T   +     K+G    A I+  S++K       R +N +IR L  +  +  A  +  K
Sbjct: 764 STYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSK 823

Query: 635 LLG 637
           + G
Sbjct: 824 VDG 826



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 237/519 (45%), Gaps = 15/519 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ S     R +E   M++ MT      P + S    + G+  E G +  A  +F+EM  
Sbjct: 242 VIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFME-GEISKACNLFNEMVQ 300

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +GV  +  +Y  +V A C+   + +A+  L  M D     D  T T +I  +      G 
Sbjct: 301 KGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY---SCLGR 357

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            K+A ++ +EM R+G  P++ T   L+D LCK   +++A  +F  +  +  +KP++ +Y+
Sbjct: 358 WKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA-TKGHKPDIISYS 416

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ GY  E +      L   M + G++ +++ +  LI  H K G  + A  +   M  +
Sbjct: 417 ILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G +PN+  Y  +I  LC+ GR+ +A E L +     L+ + + Y  L+       +  +A
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536

Query: 457 LGLFCRMVKAGL-NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
             L   M+  G+  P+I  ++++I + C + ++  ++  F   I  G  P   T+ S+I 
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           GY   G +  A      M   G  PD +TY  LI+G  K  ++D+    +  M+ K + P
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
             VT   +     + G ++ A  +   +      + I T   +++ LC       A   F
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLF 716

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLS 667
           HKL   +   +   L  + +A Y+  +    + LF+ +S
Sbjct: 717 HKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 204/417 (48%), Gaps = 5/417 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A  GR  +  ++   MT+NG+   +   N ++    + G+++ A  +F EM  +G
Sbjct: 418 LLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG 477

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++ A CRMGR+ +A   LS M+  G   +      LI  FC     G + 
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT---HGDLI 534

Query: 279 QAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A EL+ EM+ +G  +PN+   + +I  LC +G    A  +F  LV     +P++ T+ +
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVF-NLVIHIGDRPDIFTFNS 593

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I GYC   KM++A  +L+ M   G  P+  TY++LI G+ K G  +    L   M  + 
Sbjct: 594 LIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR 653

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P    Y+ ++DGL + GR   A ++  +  +        TYTI+L    +   T +A+
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF ++    L  +I    T+I A  + K+ +E+   F     +GL P   TY  MI   
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           L++G++  A   F  M + GCAP +     +I  L ++ ++ +A  +   + G  IS
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIIS 830



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 201/440 (45%), Gaps = 13/440 (2%)

Query: 207 AEEVFDEMC-----ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           A  +F+ +C      R V     +Y +++   CR  R      + + +L  G   D    
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 262 TLLITAFCDKGFRGSIKQAFE-LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
              +   C   +     +A   LL  M   G  P+ +++  +I  LC    +++A  + L
Sbjct: 204 NTFLKCLC---YAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLL 260

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           ++ + D   P+V +YT +I G   E ++++A  L   M ++G++PN  TY S+++  CK 
Sbjct: 261 RMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKA 320

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              ++A  ++  M      P+   Y A+I G    GR +EA ++ K+  +  L  D +T+
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L+    K   +K+A  +F  +   G  PDI +Y+ L+  +  + +  +    F     
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G+      +  +I  + + G +  A+  F  M   G +P+ +TY  +I+ LC+  +L +
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLW---IRTVNTLI 616
           A +    MI  G+ P  V   +L   +C  GD   A  ++ E +D+ +    I   +++I
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560

Query: 617 RKLCSEKRVGMAALFFHKLL 636
             LC+E RV  A   F+ ++
Sbjct: 561 HSLCNEGRVMNAQDVFNLVI 580


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 185/367 (50%), Gaps = 5/367 (1%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++ +E+    +     ++ +++ AY + G   +A      M D G   D  T   ++   
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
             K        A  +  +M++  + PN  T  +L++GLCK G T+ A ++F ++ +    
Sbjct: 177 VQKEV---FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK-GI 232

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN   YT ++SG C+ ++ +    LL  MK  G  P++ T  +L+ G CK+G  + A+ 
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+ L  KEG    I  Y+++IDGL +  R  E  E  +K F+  ++ D + YTIL+    
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +      AL +   M + GL+PD + Y  LI  FC    + ++     E      FPT  
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ-FYES 567
           TYT +ICG  R+G +  A + F +M  +GC+P  +T+ ALI GLCK  +L+EA   FY+ 
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 568 MIGKGIS 574
            IGK  S
Sbjct: 473 EIGKNPS 479



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 229/516 (44%), Gaps = 33/516 (6%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           N N  RA  V+  +++   + G+  +   M  EMT  G+P  T     ++   C+    +
Sbjct: 196 NYNPNRATFVI--LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
               + + M   G C D+ +   ++  +C++G++ EA   L      G +L     + LI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 266 TAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
               D  FR     +  E   +M + G +P+V  +T+LI G C+ G  + A  +   + +
Sbjct: 314 ----DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                P+ + Y A+I G+C    +++A  L   + +    P + TYT LI G C+ G  +
Sbjct: 370 R-GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--------FQRELQ-A 435
            A  + + M   GC+P+I  +NA+IDGLCK G ++EA  L  K         F R  Q A
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D++  T      + + E   A  +  +MVK G  P    Y  L+   CR+ K+  +   +
Sbjct: 489 DRVMDTANGFHRVDREE--DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 546

Query: 496 QEAITAGLFPTKETYTSMIC-GYLRDGNISSAVKYFQRM----NQIGCAPDNITYGALIS 550
            + + +   P++E  T  +   +   G +  AV+    M    N    AP    Y   + 
Sbjct: 547 LKYLRS--LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAP----YTIWLI 600

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWI 609
           GLC+  + +EA + +  +    +     + V L    CK G+   A+ I L +L+K   +
Sbjct: 601 GLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFML 660

Query: 610 --RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             R  N L+R L  + ++  A    +++     ++D
Sbjct: 661 MPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLD 696



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 17/355 (4%)

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +GA + N  LT++ T          ++ A E L   +         +  ++ D + ++  
Sbjct: 33  QGAAISNEVLTVMETV-------NPMEDALEKLAPFL---------SSEIVNDVMREQRR 76

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E  FR F+   R  +++  V T+  +I    K++  +    +LE +K   +     T++
Sbjct: 77  PELGFRFFIWTTRRRSFRSWV-THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFS 135

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI  + K G  E+A +    M   GC P+++ YN+I+  + +K     A  +  +  + 
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               ++ T+ ILL+   K  +T  AL +F  M + G+ P+   YT +++  C+ K+  + 
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +       +G  P   T  +++ G+ + G I  A    Q   + G       Y +LI G
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           L +  + DE  ++   M   GI P  V    L   +C+ G    A+ +L  + ++
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 7/272 (2%)

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N +ID L K       +++L++     +Q    T+++L++ + K    ++A+  F +M 
Sbjct: 99  HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G  PD+  Y +++    +++    +   + + +     P + T+  ++ G  ++G   
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K F  M Q G  P+ + Y  ++SGLC+  + D+  +   +M   G  P  +T   L 
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 585 YEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             +CK G    A  +L+  +K+   L I+  ++LI  L   KR      +  K+      
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 642 VDRVSLAALKNACYESN--KYAL--FSDLSQR 669
            D V    L     E     YAL   +D++QR
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 14/270 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM---TNNGLPL-ITSTLNRVVGIACELGLVEYAEEVF--- 211
           ++    + G L+E   +  +M    N  L L ++   +RV+  A     V+  E+ F   
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVL 511

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCD 270
           D+M   G    ++ YK ++   CR G+++ A   WL  +    +  ++ TL L    F  
Sbjct: 512 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPS-QEDETLKLAEEHF-- 568

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
              +G +++A   L EM  K     +  +T+ + GLC+   +E+A ++FL +++      
Sbjct: 569 --EKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFL-VLKECQMDV 625

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  +   +I+G CK+  +  A  +     E+G +        L+         + A DL+
Sbjct: 626 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLL 685

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           + M   G   + Y ++ I   L    + QE
Sbjct: 686 NRMNSAGYDLDEYLHHRIKSYLLSVWKAQE 715


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 224/477 (46%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T N VV   C+   ++ AE    +M  + 
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y   G+  EA R    M     + D  TL++L+ + C  G    IK
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG---KIK 344

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++ ++++G   KG       LF  L+  D   P+ +T+  +
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDFYTFNVL 403

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAYN +I G C  G + +A EL+ +     +  D + ++ +++   K      A  
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+PD   Y  L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 524 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 583

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS--PC 576
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+   C
Sbjct: 584 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDIC 643

Query: 577 EVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
               V       +  D A  +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 644 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 700



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 205/483 (42%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM  + +     TL+ ++G  C+ G ++ A +VFD M  +G
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G   D  T  +LI A+ + G    + 
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM---LD 414

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 415 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYNCL 473

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y  L+ G+C VG  E+A  + D M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  QR ++   I Y+I++    +   T  A   F  M ++G+  DI  Y  ++    
Sbjct: 594 LFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 653

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++    P  +
Sbjct: 654 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVV 713

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 714 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773

Query: 604 DKK 606
           D++
Sbjct: 774 DER 776



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 202/433 (46%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+     T N ++      G+++ A  +F+EM   G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y+ ++ A CR+G++ +A    + M+D+G   D      LI  FC     GS+ 
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT---HGSLL 484

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G   ++   + +I+ LCK G    A  +F  L  +    P+   Y  +
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNML 543

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M + G 
Sbjct: 544 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI 603

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   Y+ IIDGL + GR   A     +  +  +  D  TY I+L    K     +A+ 
Sbjct: 604 KPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 663

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  +I    T+I    + ++++E++  F     + L P+  TY+ MI   +
Sbjct: 664 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 723

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC P++     ++  L K++++  A  +   +  +  S   +
Sbjct: 724 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 783

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 784 TAMLLVDLFSSKG 796



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 219/479 (45%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 47  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSG-PALAVALFNRAASRAQ 105

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  ++      L+  FC+    
Sbjct: 106 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEA--- 162

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 163 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 219

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY S+++  CK    ++A   
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +   PN + YN +I G    G+ +EA  + K+  +  +  D +T ++L+    K
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +Y  ++  +  +  + +    F   +  G+ P   T
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  PD +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G++P +     L   +C  G    A  +I E ++  + +  V  +++I  LC   RV
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 186/406 (45%), Gaps = 4/406 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ ++A  G L +   +  EM ++G+     T   V+   C +G ++ A E F++M  +G
Sbjct: 403 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 462

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  +C  G + +A   +S +++ G  LD    + +I   C  G     +
Sbjct: 463 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 522

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F+L    V  G  P+   + +L+DG C  G  EKA R+F  +V S   +PNV  Y  +
Sbjct: 523 NIFDL---TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVGYGTL 578

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++GYCK  +++    L   M ++G+ P+T  Y+ +I G  + G    A      M + G 
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +I  YN ++ GL K     EA  L K+     ++ + IT   ++    +    ++A  
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  + ++ L P +  Y+ +I    ++  ++E+E  F     AG  P       ++   L
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 758

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           +   I  A  Y  ++++   + +++T   L+     +    E  +F
Sbjct: 759 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 804



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L     + ++   C+LG V  A+ +FD    
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI---GR 587

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM+++G KP+   ++++IDGL + G T                        
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K N+ T   MI G  +  ++  A+ L   +   
Sbjct: 648 VLRGLFKNRCFDEAIFLF-KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            L+P+  TY+ +I    K G  E A D+   M   GC PN    N ++  L KK  +  A
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 767 GAYLSKIDERNFSLEHLTAMLLVD 790



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 113/277 (40%), Gaps = 6/277 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  +  +G++++   +   M + G+         +V   C++G ++    +F EM
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGF 273
             RG+      Y +++      GR   A      M + G  +D  T  +++   F ++ F
Sbjct: 599 LQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCF 658

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
                +A  L +E+     K N+ T   +IDG+ +    E+A  LF  + RS    P+V 
Sbjct: 659 ----DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPSVV 713

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+ MI+   KE  +  AE +   M+  G  PN+     ++    K     RA   +  +
Sbjct: 714 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +   +        ++D    KG  +E    L   + 
Sbjct: 774 DERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAKYH 810


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 230/494 (46%), Gaps = 44/494 (8%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E   +  EM        + T + ++   C+ G VE    + +EM   G+  D   Y 
Sbjct: 179 RLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYS 238

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  +C  G +       + ML +    +  T + L+ A C K      K+A ++L+ M
Sbjct: 239 ALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQ---KWKEAAQMLDTM 295

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                +P+V  +TVL DGL K G    A ++ L L+     +PN  TY A+I+G CKE +
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKV-LDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL-MGKE---------- 396
           ++ A  +LE M ++G  P+  TY++L+ G C VG  + A DL++L M KE          
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 397 --------------------------GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
                                     G   NI  YN +IDG    G++ +A EL K A  
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             +  +  TYT+L++   K      A GLF +   +G  P +  Y TL+A+ CR+  +++
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   FQE   A   P   ++  +I G L+ G++ SA +    M  +   PDNIT+  LI+
Sbjct: 535 ARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILIN 594

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI 609
              K  +LDEA   YE M+  G  P  V   +L   Y  +G +   + +L+ + DK + +
Sbjct: 595 RFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVL 654

Query: 610 --RTVNTLIRKLCS 621
             +  +T++  LC+
Sbjct: 655 DSKLTSTILACLCN 668



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 3/313 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF +L  ++++G+  NVY   +L+ G C+ G + KA  LF  +++ +   P+  +Y  +I
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFC-MMKRNCLIPDCVSYNTVI 171

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G CK +++  A+ L + MK     PN+ T+++LI G CK G+ E  + L++ M K G  
Sbjct: 172 NGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLE 231

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +++ Y+A+I G C KG ++   EL  +  ++ +  + +TY+ L++   K+ + K+A  +
Sbjct: 232 GDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQM 291

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M    + PD+ AYT L     +  +  ++ K     +  G  P   TY ++I G  +
Sbjct: 292 LDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCK 351

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK--GISPCE 577
           +G +  A+   + M + G  PD +TY  L+ GLC   K+DEA      ++ K   I P  
Sbjct: 352 EGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDV 411

Query: 578 VTRVTLAYEYCKQ 590
                +  E CKQ
Sbjct: 412 FAFNLVIQELCKQ 424



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 5/322 (1%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L L+    +  NV+ +  ++ G+C+    ++A  L   MK   L+P+  +Y ++I G CK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                 A +L   M    C PN   ++A+IDG CK G V+E + LL++  +  L+ D   
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S    + + ++   LF  M++  + P++  Y+ L+ A C+++K KE+ +      
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
              + P    YT +  G  ++G  S A+K    M + G  P+N+TY A+I+GLCK+ ++D
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIR----TVNT 614
           +A    E+M  KG  P  VT  TL    C  G    A+ +L  L  K+  I+      N 
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 615 LIRKLCSEKRVGMAALFFHKLL 636
           +I++LC ++R+  A   ++ ++
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMV 438



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 195/471 (41%), Gaps = 76/471 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G ++EGF ++ EM   GL       + ++   C  G +E  +E+F+EM  + 
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264

Query: 219 VCADASSYKLMVVAYCRM-----------------------------------GRVTEAD 243
           V  +  +Y  ++ A C+                                    GR ++A 
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           + L  M+ RG   +N T   +I   C +G    +  A  +LE M +KG KP+V T++ L+
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEG---RVDDALGILETMAKKGKKPDVVTYSTLV 381

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNY--KP------------------------------- 330
            GLC  G  ++A  L L L+ S  +  KP                               
Sbjct: 382 KGLCGVGKIDEAVDL-LNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER 440

Query: 331 ----NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
               N+ TY  +I GY    K+ +A  L +   + G+ PN  TYT LI G CK+     A
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIA 500

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L +     G  P +  YN ++  LC++  V++A  L ++        D +++ I++  
Sbjct: 501 KGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDG 560

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
            LK  + + A  L   M+   L PD   ++ LI  F +  ++ E+   ++  ++ G  P 
Sbjct: 561 TLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPD 620

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
              + S++ GY   G     V   Q+M       D+     +++ LC  SK
Sbjct: 621 AVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 174/407 (42%), Gaps = 61/407 (14%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           K R  +  Y V A  L  NG    A +V+  MV         K G     E  NN     
Sbjct: 299 KVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV---------KRG-----EEPNN----- 339

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C+ G V+ A  + + M  +G   D  +Y  +V   C +G++ EA   L+
Sbjct: 340 -VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398

Query: 248 AMLDRGAIL--DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            ++ +   +  D     L+I   C    +  ++ A  +   MV +G+  N+ T+ +LIDG
Sbjct: 399 LLMSKEFHIKPDVFAFNLVIQELCK---QRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
               G   KA  L+   V S    PN  TYT +I+G CK + ++ A+ L  + +  G  P
Sbjct: 456 YLSAGKLTKALELWKDAVDS-GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
             + Y +L+   C+  + E+A +L   M      P++ ++N IIDG  K G V+ A ELL
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD-------IHAYT-- 476
            +     L  D IT++IL++  LK  +  +A  L+ RMV  G  PD       +  Y+  
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634

Query: 477 --------------------------TLIAAFCRQKKMKESEKFFQE 497
                                     T++A  C   K  + EK   +
Sbjct: 635 GKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPK 681



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 3/327 (0%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+  +   +I    K +  +    +  +M    + P   + ++LI           A
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + ++ L+ K G   N+Y +N ++ G C+ G   +A +L     +  L  D ++Y  +++ 
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K     +A  LF  M      P+   ++ LI  FC+   ++E     +E    GL   
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y+++I G+   G+I    + F  M +    P+ +TY  L++ LCK+ K  EA Q  +
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEK 623
           +M G  + P  V    LA    K G ++ A+ +L+ + K+       T N +I  LC E 
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
           RV  A      +  K +  D V+ + L
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTL 380


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 198/431 (45%), Gaps = 8/431 (1%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           + A  G + E  S+  +M   GL  +  T N ++   C  G V  A  + ++M  +G+  
Sbjct: 195 ALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 254

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  +Y  +V   C+MG    A   LS M +     D    + +I   C  G     +  F
Sbjct: 255 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 314

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
               EM+ KG  PNV+T+  +IDG C  G    A RL   ++  +   P+V T+ A+IS 
Sbjct: 315 S---EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISA 370

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             KE K+  AE L + M  + + P+T TY S+IYG CK   F+ A  + DLM     +P+
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPD 426

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N IID  C+  RV E  +LL++  +R L A+  TY  L+    +      A  LF 
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+  G+ PD      L+  FC  +K++E+ + F+    + +      Y  +I G  +  
Sbjct: 487 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 546

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A   F  +   G  PD  TY  +ISG C +S + +A   +  M   G  P   T  
Sbjct: 547 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 606

Query: 582 TLAYEYCKQGD 592
           TL     K G+
Sbjct: 607 TLIRGCLKAGE 617



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 9/403 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   ++G  K   +++ +M    +       + ++   C+ G    A+ +F EM  +G
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  +C  GR ++A R L  M++R    D  T   LI+A   +G    + 
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLF 378

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+ +   P+  T+  +I G CK    + A  +F  L+ S    P+V T+  +
Sbjct: 379 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTI 433

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC+ ++++    LL  +  +GL+ NT TY +LI+G C+V N   A DL   M   G 
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N ++ G C+  +++EA EL +     ++  D + Y I++    K ++  +A  
Sbjct: 494 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 553

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+  Y  +I+ FC +  + ++   F +    G  P   TY ++I G L
Sbjct: 554 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 613

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           + G I  +++    M   G + D  T   +++ L    +LD++
Sbjct: 614 KAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKS 655



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 226/546 (41%), Gaps = 85/546 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  + R     S+  +M    +PL   + N ++   C+   + ++   F ++   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA----------TLTLLITAF 268
              D  ++  ++   C   R++EA      M++ G++ D            T   LI   
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C     G + +A  L+ +MV KG   +V T+  +++G+CK G T+ A  L  K+  + + 
Sbjct: 232 C---LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET-HI 287

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KP+V  Y+A+I   CK+   + A+ L   M E+G+ PN  TY  +I G C  G +  A  
Sbjct: 288 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M +    P++  +NA+I    K+G++ EA +L  +   R +  D +TY  ++    
Sbjct: 348 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 407

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K      A  +F  M     +PD+  + T+I  +CR K++ E  +  +E    GL     
Sbjct: 408 KHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT------------------------ 544
           TY ++I G+    N+++A   FQ M   G  PD IT                        
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523

Query: 545 -----------YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                      Y  +I G+CK SK+DEA   + S+   G+ P                  
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP------------------ 565

Query: 594 ATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                          ++T N +I   C +  +  A + FHK+       D  +   L   
Sbjct: 566 --------------DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 611

Query: 654 CYESNK 659
           C ++ +
Sbjct: 612 CLKAGE 617



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 10/325 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR  +   ++ +M    +     T N ++  + + G +  AE++ DEM  
Sbjct: 330 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 389

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           R +  D  +Y  M+  +C+  R  +A      M D  A  D  T   +I  +C       
Sbjct: 390 RCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYCRA---KR 442

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +  +LL E+ R+G   N  T+  LI G C+      A  LF +++ S    P+  T  
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCN 501

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+C+ EK+  A  L E ++   +  +T  Y  +I+G CK    + A+DL   +   
Sbjct: 502 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 561

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN +I G C K  + +A  L  K      + D  TY  L+   LK  E  ++
Sbjct: 562 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 621

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAA 481
           + L   M   G + D  A+T  + A
Sbjct: 622 IELISEMRSNGFSGD--AFTIKMVA 644


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 246/555 (44%), Gaps = 74/555 (13%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++ + ++GR+++   ++ EM ++ L +     N ++   C+LG +  A  +  EM
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  D  SY  +V  YC+ G + +A    + ML  G      T   L+  FC     
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS---L 467

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           GSI  A  L   M++KG  PN  + + L+DG  K G TEKA  L+ K   +     N  T
Sbjct: 468 GSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLW-KETLARGLAKNTTT 526

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY------- 387
           +  +I+G CK E+M  AE L+++MK+    P+  TY +L  G+CK+G+ +RA        
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586

Query: 388 ----------------------------DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                                       D++  M   G +PN  AY A+I G CK+G + 
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA----- 474
            AY L  +  ++ L  +    + L+S   ++ +  +A  +   +V   + PDI A     
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEI 706

Query: 475 ---------------------YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
                                +  +I   C+  ++++++    +    G      TY+S+
Sbjct: 707 GKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSL 766

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I G    G +  A      M  +G  P+ +TY +LI GLCK  +L  A   ++ +  KGI
Sbjct: 767 IHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGI 826

Query: 574 SPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
           SP  +T  TL  ++CK G    A      +I E +   ++  T + LI  LC++  +  A
Sbjct: 827 SPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVF--TYSILINGLCTQGYMEEA 884

Query: 629 ALFFHKLLGKDQNVD 643
                +++  + NVD
Sbjct: 885 IKLLDQMI--ENNVD 897



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 235/523 (44%), Gaps = 41/523 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ + A  G+L     +  EM   G  L   + N ++    + G +     VF++M   G
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +  +M  AYC++  V  A  ++  M   G  ++      ++  +C+ G      
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVG---QTN 295

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  +L+ +  +G+ PN+ T+T+L+ G C +   E+A  +  ++ ++     +   + A+
Sbjct: 296 DARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAV 355

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+  +M  A  LL  M +  L  N   Y  +I G+CK+G    A++++  M   G 
Sbjct: 356 INGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGV 415

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y+YN+++DG CKKG + +A+E      +    A  +TY  LL           AL 
Sbjct: 416 RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALR 475

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M+K G+ P+  + +TL+  F +  K +++   ++E +  GL     T+ ++I G  
Sbjct: 476 LWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC---------------Q 563
           +   +  A +   +M Q  C PD ITY  L SG CK   +D A                +
Sbjct: 536 KIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIE 595

Query: 564 FYESMI--------------------GKGISPCEVTRVTLAYEYCKQGDSATAM-IILES 602
           F+ S+I                     +G+SP  V    L   +CK+GD  TA  + LE 
Sbjct: 596 FFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           ++K L   +   ++L+     + +   A L    L+G D   D
Sbjct: 656 IEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD 698



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 222/532 (41%), Gaps = 102/532 (19%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   M++ + ++GR+ E  +++ EMT  G+   T + N +V   C+ GL+  A E ++ M
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G  A   +Y  ++  +C +G + +A R    ML +G   +  + + L+  F   G  
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSG-- 503

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              ++A  L +E + +G   N  T   +I+GLCK     +A  L  K+ +     P++ T
Sbjct: 504 -KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM-KQWRCPPDIIT 561

Query: 335 YTAMISGYCKEEKMNRAEMLLER-----------------------------------MK 359
           Y  + SGYCK   M+RA  +L                                     M 
Sbjct: 562 YRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMS 621

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYD------------------------------- 388
            +GL PNT  Y +LI G CK G+   AY+                               
Sbjct: 622 NRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFD 681

Query: 389 -----LMDLMGKEGCTPNIYA--------------------------YNAIIDGLCKKGR 417
                L +L+G +   P+I A                          +N +I GLCK GR
Sbjct: 682 EANLVLQNLVGTD-MIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGR 740

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +++A  LL     +   AD  TY+ L+           A  L   M+  GL P+I  Y +
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+  ++  +   F++  T G+ P   TY ++I  + +DG I+ A K  QRM + G
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
             P   TY  LI+GLC Q  ++EA +  + MI   + P  VT  TL   Y +
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 111/214 (51%), Gaps = 4/214 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           ++ GN   A  +   ++    ++GR+++  +++ ++ + G      T + ++      G 
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A ++ D M + G+  +  +Y  ++   C+ G ++ A      +  +G   +  T   
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C  G+   I +AF+L + M+ +G  P V+T+++LI+GLC +G+ E+A +L  +++
Sbjct: 836 LIDKHCKDGY---ITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMI 892

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
             +N  PN  TY  +I GY + E ++   M L++
Sbjct: 893 E-NNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 210/445 (47%), Gaps = 4/445 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+++ + GR+ E F+ V EM  +       T N ++     LG V  A++V   M  +G
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  ++ +Y L++  YC+ G++ +A++ +  M+++   +D     +LI A+C  G    + 
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAG---RVD 378

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  + + M++ G K N      LI+G CK G   KA  + + + +  N KP+ + Y  +
Sbjct: 379 DALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM-KDWNLKPDSYGYNTL 437

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+CK+E   +A  L + M  +G+     TY +L+     VG+ E A  + +LM K G 
Sbjct: 438 LDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGV 497

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++D   K G    A  + K A  +        Y  ++    K  +  QA  
Sbjct: 498 APNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQE 557

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F +M + G  PD   Y TLI  +C+   + E+ K    +   G+  + E Y S+I G  
Sbjct: 558 IFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVF 617

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   +         M     +P+ +TYG+LI+G C +  +D+A   Y  MI KGI+P  +
Sbjct: 618 RSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
               +     + G    A +IL  +
Sbjct: 678 IGSKIVSSLYRHGKIDEANLILHQI 702



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 201/426 (47%), Gaps = 4/426 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F  +  V   ++  FAE G  K    +   M   G      + N ++    + G    A 
Sbjct: 182 FSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKAL 241

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            V+++M A G+  D  SY +MV AYC+ GRV EA  ++  M       +  T   LI  +
Sbjct: 242 LVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGY 301

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G     K+   L+ E   KG   N  T+T+LI G CK+G  E+A +L +  +   N 
Sbjct: 302 VSLGDVCGAKKVLALMSE---KGIPENSRTYTLLIKGYCKRGQMEQAEKL-IGCMMEKNL 357

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             + H Y  +I  YC   +++ A  + + M + GL  NT    SLI G+CK+G+  +A +
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           ++  M      P+ Y YN ++DG CK+    +A++L  +   + +    +TY  LL    
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLF 477

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
                + AL ++  M K G+ P+   Y TL+ AF +      +   +++A++ G   +  
Sbjct: 478 HVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSIT 537

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y +MICG+ +   +  A + F +M ++G  PD ITY  LI G CK   L EA +  +  
Sbjct: 538 LYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMS 597

Query: 569 IGKGIS 574
              GIS
Sbjct: 598 ERDGIS 603



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 208/482 (43%), Gaps = 39/482 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +     + F +  EM N G+     T N ++     +G VE+A  +++ M  RG
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++ A+ ++G    A       L +G          +I  FC       + 
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCK---MEKLV 553

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA E+  +M   G+ P+  T+  LIDG CK G   +A +L   +   D    +   Y ++
Sbjct: 554 QAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDGISSSTEMYNSL 612

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G  + E++ +   LL  MK + L PN  TY SLI G C  G  ++AY+    M  +G 
Sbjct: 613 ITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGI 672

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELL------------------KKAFQRELQADKIT- 439
            PNI   + I+  L + G++ EA  +L                   K+  R L+  KI  
Sbjct: 673 APNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVD 732

Query: 440 ----------------YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
                           Y I ++   K         +   ++  G  PD + Y +LI A  
Sbjct: 733 SFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACS 792

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              K+ E+     + I AGL P    Y ++I G  + GN+  A + F ++ + G +P  +
Sbjct: 793 AVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVV 852

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI G CK  +  EA +  + M  +GI P  +T  TL +    +G S  ++ +L  +
Sbjct: 853 TYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912

Query: 604 DK 605
            K
Sbjct: 913 MK 914



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 226/550 (41%), Gaps = 91/550 (16%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           R Y +        G  E+A +++ CM               + ++   GR+ +   +   
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL + T   N ++   C+LG V  A EV   M    +  D+  Y  ++  +C+   
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
             +A +    M ++G    N T+    T   +    G ++ A  +   M ++G  PN  T
Sbjct: 447 FIKAFKLCDEMHNKGV---NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVT 503

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+D   K G  ++A  ++ K   S  +  ++  Y  MI G+CK EK+ +A+ +  +M
Sbjct: 504 YCTLLDAFFKVGTFDRAMMIW-KDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           KE G  P+  TY +LI G+CKVGN   A  L D+  ++G + +   YN++I G+ +   +
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           Q+   LL +   REL  + +TY  L++    +    +A   + +M+  G+ P+I   + +
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKI 682

Query: 479 IAAFCRQKKMKES------------------------------------EKFFQEAITAG 502
           +++  R  K+ E+                                    + F ++A++  
Sbjct: 683 VSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIP 742

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT------------------ 544
           +      Y   I G  +  NI    +    +   G  PDN T                  
Sbjct: 743 I-SNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAF 801

Query: 545 -----------------YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
                            Y ALI+GLCK   LD A + +  +  KG+SP  VT  TL   Y
Sbjct: 802 CLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGY 861

Query: 588 CKQGDSATAM 597
           CK G +  A+
Sbjct: 862 CKGGRTTEAL 871



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/532 (22%), Positives = 219/532 (41%), Gaps = 36/532 (6%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           +L+S             ++  + + G++++   ++  M    L +       ++   C  
Sbjct: 315 ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTA 374

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V+ A  + D M   G+  +      ++  YC++G V +A   L +M D     D+   
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434

Query: 262 TLLITAFCD-----KGFR---------------------------GSIKQAFELLEEMVR 289
             L+  FC      K F+                           G ++ A  +   M +
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           +G  PN  T+  L+D   K G  ++A  ++ K   S  +  ++  Y  MI G+CK EK+ 
Sbjct: 495 RGVAPNEVTYCTLLDAFFKVGTFDRAMMIW-KDALSKGFTKSITLYNTMICGFCKMEKLV 553

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A+ +  +MKE G  P+  TY +LI G+CKVGN   A  L D+  ++G + +   YN++I
Sbjct: 554 QAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI 613

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G+ +   +Q+   LL +   REL  + +TY  L++    +    +A   + +M+  G+ 
Sbjct: 614 TGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIA 673

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+I   + ++++  R  K+ E+     +               +    LR       V  
Sbjct: 674 PNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDS 733

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F +        +NI Y   I+GLCK   +D+  +    ++ KG  P   T  +L +    
Sbjct: 734 FGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSA 793

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGK 638
            G    A  + + +     +  +   N LI  LC    +  A   F+KL  K
Sbjct: 794 VGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 203/450 (45%), Gaps = 18/450 (4%)

Query: 153 HEVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +EV  C ++ +F ++G       +  +  + G     +  N ++   C++  +  A+E+F
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            +M   G   D  +Y+ ++  YC++G + EA + L  M +R  I   ++ T +  +    
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALK-LKDMSERDGI---SSSTEMYNSLITG 615

Query: 272 GFRGSIKQAFE-LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            FR    Q    LL EM  +   PNV T+  LI G C KG  +KA+  + K++      P
Sbjct: 616 VFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMI-DKGIAP 674

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+   + ++S   +  K++ A ++L ++ +  + P      S+      + + E    ++
Sbjct: 675 NIIIGSKIVSSLYRHGKIDEANLILHQIAD--IDPIAAHAHSVELPKSDLRHLE-TQKIV 731

Query: 391 DLMGKEGCT---PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           D  GK+  +    N   YN  I GLCK   + +   +L     +    D  TY  L+   
Sbjct: 732 DSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHAC 791

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
               +  +A  L   M+ AGL P+I  Y  LI   C+   +  + + F +    GL PT 
Sbjct: 792 SAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTV 851

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY ++I GY + G  + A++   +M + G  P +ITY  LI GL  + K +++      
Sbjct: 852 VTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNE 911

Query: 568 MI--GKGISPCEVTRVTLAYEYCKQGDSAT 595
           M+  GKG S   V    +A  Y K  D  +
Sbjct: 912 MMKAGKGSS---VMDPLVARAYVKWRDKQS 938



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 179/376 (47%), Gaps = 7/376 (1%)

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +++  F +KG     K A  + + M + G  P++ +   L+  L + G   KA  ++ ++
Sbjct: 191 MILKVFAEKGM---TKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    P++ +YT M++ YCKE +++ A   ++ M+     PN  TY SLI G+  +G+
Sbjct: 248 I-ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A  ++ LM ++G   N   Y  +I G CK+G++++A +L+    ++ L  D+  Y +
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGV 366

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  +        AL +   M+K GL  +     +LI  +C+   + ++ +         
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P    Y +++ G+ +  +   A K    M+  G     +TY  L+  L     ++ A 
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKL 619
             +  M  +G++P EVT  TL   + K G    AM+I +    K + +++   NT+I   
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546

Query: 620 CSEKRVGMAALFFHKL 635
           C  +++  A   F K+
Sbjct: 547 CKMEKLVQAQEIFLKM 562



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 175/412 (42%), Gaps = 39/412 (9%)

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
            F K   F R  ++   +L S G F ++  +   M+  F ++ +L +   + ++M   G 
Sbjct: 510 AFFKVGTFDRAMMIWKDAL-SKG-FTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P    T   ++   C++G +  A ++ D     G+ +    Y  ++    R   + + + 
Sbjct: 568 PPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L+ M +R    +  T   LI  +CDKG    + +A+    +M+ KG  PN+   + ++ 
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGM---MDKAYNAYFKMIDKGIAPNIIIGSKIVS 684

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHT------------------------------ 334
            L + G  ++A  +  ++   D    + H+                              
Sbjct: 685 SLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPIS 744

Query: 335 ----YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
               Y   I+G CK + ++    +L  +  +G  P+  TY SLI+    VG    A+ L 
Sbjct: 745 NNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLR 804

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D M   G  PNI  YNA+I+GLCK G +  A  L  K  ++ L    +TY  L+  + K 
Sbjct: 805 DDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKG 864

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
             T +AL L  +M + G+ P    Y+TLI     + K ++S     E + AG
Sbjct: 865 GRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 210/448 (46%), Gaps = 30/448 (6%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M  RG   D+ T ++++   C  G    + +A ELL ++   G K NV T++V+IDG CK
Sbjct: 64  MQRRGYPPDDFTYSIVLRGLCKAG---ELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               + A  +F  +       P+V T+ +++ G C  E+M+ A +L E M + G  PN  
Sbjct: 121 ASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +Y++L+ G CK G  + A  L + M ++ C P++ AY + + GLCK  RV EA +  +K 
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 429 FQRELQADKITYTILLS----------------EHL-KQAETKQALGLFCRMVKAGLNPD 471
             +  +AD + ++ ++                 EHL +     +A   F  M+     P 
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF---PTKETYTSMICGYLRDGNISSAVK 528
              + TLI A C+ K++ +    FQ   +   F   P  ETY  M+    +   +  A +
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
               M   G +PD +TY AL+ GLCK  KLD AC   E M  +G+ P   T  ++     
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420

Query: 589 KQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           K G    A+  LE++  +     + T NTL+  LC   R+  A  F  K++      D  
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 646 S----LAALKNACYESNKYALFSDLSQR 669
           S    + AL  +   +  +A+F ++ +R
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKR 508



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 199/433 (45%), Gaps = 21/433 (4%)

Query: 168 RLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           R+ E F +   M   G  P + S    + G+ C+ G ++ A  +++EM  +    D  +Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGL-CKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------- 273
              V   C+  RV EA      M+ +G+  D    + +I   C KG              
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 274 -RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY--KP 330
             G + +A +  EEM+ +   P+      LI  +CK         LF ++     +   P
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+ TY  M+   CK ++++ A+ L+  M   GL P+  TY++L+ G CK+G  +RA DL+
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M KEG  P+ +   +I++ L K G+V  A   L+    R    D +TY  LL    K 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A+    +MV A   PD+ +YT +I A CR  +   +   FQE +  G+ P    Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S++ G  R+G    A++  +      C PD + +  ++ GLCK  K ++AC+  E M  
Sbjct: 518 HSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574

Query: 571 KGISPCEVTRVTL 583
            G      T +++
Sbjct: 575 AGFPADAFTYISV 587



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 7/286 (2%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    MV +  +  +L E   +V EM N GL     T + +V   C+LG ++ A ++ +E
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV  D+ +   ++ A  + G+V  A   L  M  RG+  D  T   L+   C    
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA-- 457

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G I +A   L +MV     P+V+++T++I  LC+ G    A  +F ++V+     P+  
Sbjct: 458 -GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR-GVLPDTV 515

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y +++ G  +       ++ LE +K     P+   +  ++ G CK G  E A ++++ M
Sbjct: 516 LYHSLLDGLARN---GLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERM 572

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
              G   + + Y +++ GL K G+V +A +L+  A +     ++++
Sbjct: 573 ADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERLS 618


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 244/535 (45%), Gaps = 47/535 (8%)

Query: 142 SLISNGNFERAHEVMQCMVS----SFAEIGR--LKEGFSMVIEMTNNGLPLITSTL-NRV 194
           +L   G  E A  V   M +    SF  + R   + G S+      +G+P +   + N V
Sbjct: 154 ALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTV 213

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----- 249
           V   C+ GLVE AE + + M  +G+  +  ++   + A C+ GRV +A R    M     
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQ 273

Query: 250 --LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             L R    D  T  ++++ FCD GF   + +A  L++ M   G+   V ++   + GL 
Sbjct: 274 HGLPRP---DQVTFDVMLSGFCDAGF---VDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G   +A  L L+ +  +  +PN +TY  ++SG CKE K   A  +   ++   + P+ 
Sbjct: 328 RNGRVGEAQEL-LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDV 386

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYTSL++ +C  GN   A  ++D M ++GC PN + YN ++  L + GR  EA  LL++
Sbjct: 387 VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLER 446

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN------------------ 469
             ++    D     I++    + +    A+ +   M + G                    
Sbjct: 447 MNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSI 506

Query: 470 -----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
                PD   Y+ LI+A C++ +  E++K   E I   + P    Y + I GY + G  S
Sbjct: 507 SQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K  + M + GC P   TY  LI G  ++ K +E  +    M  KGISP  +T  +L 
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLI 626

Query: 585 YEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +C+QG    AM +L E L  +L   I + + LI+  C       A + F   L
Sbjct: 627 KSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAAL 681



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 206/457 (45%), Gaps = 40/457 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +E A+ VFD M AR    +  S+ ++   YCR GR  +A + L  M
Sbjct: 147 TRNLLLQALCDAGRMELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGM 202

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                ++ N     ++  FC +G    +++A  L+E M  +G  PNV T    I  LCK 
Sbjct: 203 PSMNLVVCNT----VVAGFCKEGL---VEEAERLVERMRVQGLAPNVVTFNARISALCKA 255

Query: 310 GWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           G    A+R+F  +     +   +P+  T+  M+SG+C    ++ A +L++ M+  G L  
Sbjct: 256 GRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRR 315

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             +Y   + G  + G    A +L+  M  EG  PN Y YN I+ GLCK+G+  +A  +  
Sbjct: 316 VESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVEN 375

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 +  D +TYT LL  +  +     A  +   M + G  P+   Y  L+ +  R  
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG--------- 537
           +  E+E+  +     G          +I G  R+  +  A+     M + G         
Sbjct: 436 RTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGN 495

Query: 538 --------------CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                         C PD ITY  LIS LCK+ + DEA +    MI K ISP  V   T 
Sbjct: 496 SFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
            + YCK G ++ A+ +L  ++KK      RT N LIR
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 30/449 (6%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F R  E     +S     GR+ E   ++ EM + G+   + T N +V   C+ G    
Sbjct: 310 GGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFD 369

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  V + + +  +  D  +Y  ++ AYC  G +  A+R L  M  +G   ++ T  +L+ 
Sbjct: 370 ARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQ 429

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG------------WTEK 314
           +    G      +A  LLE M  KG+  +     ++IDGLC+              W E 
Sbjct: 430 SLWRAG---RTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEG 486

Query: 315 AFRL------FLKLVRSDNYK----PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           +  L      FL +V   +      P+  TY+ +IS  CKE + + A+  L  M  + + 
Sbjct: 487 SGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDIS 546

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P++  Y + I+G+CK G    A  ++  M K+GC P+   YN +I G  +K + +E  +L
Sbjct: 547 PDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKL 606

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           + +  ++ +  + +TY  L+    +Q    +A+ L   M++  L P+I ++  LI A+C+
Sbjct: 607 MSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666

Query: 485 QKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRD-GNISSAVKYFQRMNQIGCAPDN 542
                 ++  F  A+ T G    KE    ++C  L   G    A    +   ++  +  +
Sbjct: 667 ITDFPSAQMVFDAALRTCG---QKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQS 723

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGK 571
             Y  +ISGLC+  ++D A    + +I K
Sbjct: 724 FPYKQIISGLCEVGEVDHAHSLLKLLIAK 752



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 180/430 (41%), Gaps = 78/430 (18%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK------------- 329
           L ++++  G +P+V+T  +L+  LC  G  E A R+F  +   + +              
Sbjct: 132 LYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGR 191

Query: 330 -----------P--NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                      P  N+     +++G+CKE  +  AE L+ERM+ QGL PN  T+ + I  
Sbjct: 192 SIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISA 251

Query: 377 HCKVGNFERAYD---------------------------------------LMDLMGKEG 397
            CK G    AY                                        L+D+M   G
Sbjct: 252 LCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
               + +YN  + GL + GRV EA ELL++     +Q +  TY I++S   K+ +   A 
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDAR 371

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   +    ++PD+  YT+L+ A+C +  +  + +   E    G  P   TY  ++   
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G  + A +  +RMN+ G + D      +I GLC+ S+LD A    + M  +G     
Sbjct: 432 WRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEG----- 486

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKL 635
                 +    + G+S  +++   S+ ++      T + LI  LC E R   A     ++
Sbjct: 487 ------SGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEM 540

Query: 636 LGKDQNVDRV 645
           + KD + D V
Sbjct: 541 IVKDISPDSV 550



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 9/181 (4%)

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A+T+   PT   Y  +I   LR+  +      ++ +   G  PD  T   L+  LC   +
Sbjct: 101 ALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGR 160

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           ++ A + +++M  +     E +   LA  YC+ G S  A+ +L+ +   + +   NT++ 
Sbjct: 161 MELAQRVFDAMPARN----EFSFGILARGYCRAGRSIDALKVLDGM-PSMNLVVCNTVVA 215

Query: 618 KLCSEKRVGMAALFFHKL----LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 673
             C E  V  A     ++    L  +       ++AL  A    + Y +F D+ +    G
Sbjct: 216 GFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHG 275

Query: 674 I 674
           +
Sbjct: 276 L 276


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 168/345 (48%), Gaps = 4/345 (1%)

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           +ML  G   D  T   LI   C KG+   +  A EL+ EM  KG +PNV T+T+LID  C
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGY---LVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G  E+A R  L  +       N   Y  +IS  CK+EK+  A  +   M  +G  P+ 
Sbjct: 61  KEGRLEEA-RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 119

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+ SLI+G CKV  FE A  L   M  EG   N   YN +I    ++G +QEA +L+  
Sbjct: 120 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 179

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              R    D ITY  L+    +    ++ L LF  M+  GLNP+  +   LI   CR   
Sbjct: 180 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 239

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++ + +F ++ I  GL P   TY S+I G  + G    A+  F ++   G  PD ITY  
Sbjct: 240 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 299

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           LIS  CK+   D+A       +  G  P EVT   L   + K+GD
Sbjct: 300 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 168/316 (53%), Gaps = 1/316 (0%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E M+  G  P+++T+  LI GLCKKG+   A R  +  ++    +PNV TYT +I  +CK
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSA-RELMNEMQIKGCEPNVITYTILIDRFCK 61

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E ++  A  +L+ M  +GL  N   Y  LI   CK    + A ++   M  +GC P+I+ 
Sbjct: 62  EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +N++I GLCK  + +EA  L +      + A+ ITY  L+   L++   ++AL L   M+
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G   D   Y  LI A CR   +++    F++ ++ GL P   +   +I G  R GNI 
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+++ + M   G  PD +TY +LI+GLCK  +  EA   ++ +  +GI P  +T  TL 
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301

Query: 585 YEYCKQGDSATAMIIL 600
             +CK+G    A ++L
Sbjct: 302 SWHCKEGMFDDAHLLL 317



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 164/333 (49%), Gaps = 4/333 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +  A E+ +EM  +G   +  +Y +++  +C+ GR+ EA   L  M
Sbjct: 16  TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +G  L+      LI+A C       ++ A  +  +M  KG KP+++T   LI GLCK 
Sbjct: 76  SGKGLALNAVGYNCLISALCKD---EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              E+A  L+  ++  +    N  TY  +I  + +   M  A  L+  M  +G   +  T
Sbjct: 133 NKFEEALGLYQDMLL-EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y  LI   C+ GN E+   L + M  +G  PN  + N +I+GLC+ G +Q A E L+   
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            R L  D +TY  L++   K    ++AL LF ++   G+ PD   Y TLI+  C++    
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           ++       + +G  P + T+  ++  ++++G+
Sbjct: 312 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 141/283 (49%), Gaps = 3/283 (1%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           E M   G  P+  TY +LI G CK G    A +LM+ M  +GC PN+  Y  +ID  CK+
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           GR++EA  +L +   + L  + + Y  L+S   K  + + AL +F  M   G  PDI  +
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            +LI   C+  K +E+   +Q+ +  G+     TY ++I  +LR G +  A+K    M  
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            GC  D+ITY  LI  LC+   +++    +E M+ KG++P  ++   L    C+ G+   
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 596 AMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           A+  L  +  +     I T N+LI  LC   R   A   F KL
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 164/345 (47%), Gaps = 4/345 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           + M + G   D  +Y  +++  C+ G +  A   ++ M  +G   +  T T+LI  FC +
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
              G +++A  +L+EM  KG   N   +  LI  LCK    + A  +F  +  S   KP+
Sbjct: 63  ---GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPD 118

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + T+ ++I G CK  K   A  L + M  +G++ NT TY +LI+   + G  + A  L++
Sbjct: 119 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 178

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   GC  +   YN +I  LC+ G +++   L +    + L  + I+  IL++   +  
Sbjct: 179 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 238

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             + AL     M+  GL PDI  Y +LI   C+  + +E+   F +    G+ P   TY 
Sbjct: 239 NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           ++I  + ++G    A     R    G  P+ +T+  L+S   K+ 
Sbjct: 299 TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 149/308 (48%), Gaps = 3/308 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++ TY  +I G CK+  +  A  L+  M+ +G  PN  TYT LI   CK G  E A ++
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +D M  +G   N   YN +I  LCK  +VQ+A  +      +  + D  T+  L+    K
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + ++ALGL+  M+  G+  +   Y TLI AF R+  M+E+ K   + +  G      T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I    R GNI   +  F+ M   G  P+NI+   LI+GLC+   +  A +F   MI
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVG 626
            +G++P  VT  +L    CK G +  A+ + + L  +       T NTLI   C E    
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311

Query: 627 MAALFFHK 634
            A L   +
Sbjct: 312 DAHLLLSR 319



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + GRL+E  +++ EM+  GL L     N ++   C+   V+ A  +F +M ++G
Sbjct: 55  LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 114

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++   C++ +  EA      ML  G I +  T   LI AF     RG+++
Sbjct: 115 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR---RGAMQ 171

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L+ +M+ +G   +  T+  LI  LC+ G  EK   LF  ++ S    PN  +   +
Sbjct: 172 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM-SKGLNPNNISCNIL 230

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C+   +  A   L  M  +GL P+  TY SLI G CK G  + A +L D +  EG 
Sbjct: 231 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 290

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            P+   YN +I   CK+G   +A+ LL +        +++T+ IL+S  +K+ + +
Sbjct: 291 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 138/260 (53%), Gaps = 4/260 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++S+  +  ++++  +M  +M++ G      T N ++   C++   E A  ++ +M  
Sbjct: 88  NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 147

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            GV A+  +Y  ++ A+ R G + EA + ++ ML RG  LD+ T   LI A C     G+
Sbjct: 148 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA---GN 204

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I++   L E+M+ KG  PN  +  +LI+GLC+ G  + A   FL+ +      P++ TY 
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE-FLRDMIHRGLTPDIVTYN 263

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++I+G CK  +   A  L ++++ +G+ P+  TY +LI  HCK G F+ A+ L+      
Sbjct: 264 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 323

Query: 397 GCTPNIYAYNAIIDGLCKKG 416
           G  PN   +  ++    K+G
Sbjct: 324 GFIPNEVTWYILVSNFIKEG 343


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 192/364 (52%), Gaps = 11/364 (3%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G+  D  +  +++  +C MG++T     L+ +L RG      TL  LI   C    +G 
Sbjct: 87  KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLC---LKGQ 143

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    ++++ +G++ N   +  LI+G+CK G T  A +L LK +     KP+V  Y+
Sbjct: 144 VKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKL-LKKIDGRLTKPDVVMYS 202

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  +  TY +LIYG C VG  + A  L+++M  +
Sbjct: 203 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLK 262

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA-------YELLKKAFQRELQADKITYTILLSEHLK 449
              P++Y Y  ++D LCK+G+V+EA       ++L+ +   R   AD ITY+ L+    K
Sbjct: 263 TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 322

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +A+ LF +M   G+ P++  +T L+    +  ++K++++ FQ+ +T G      T
Sbjct: 323 NGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYT 382

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  MI G+ + G +  A+    +M   GC P+  T+  +I  L K+ + D+A +    MI
Sbjct: 383 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 442

Query: 570 GKGI 573
            +G+
Sbjct: 443 ARGL 446



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 181/356 (50%), Gaps = 11/356 (3%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F  +G++  GFS++ ++   G P  T TLN ++   C  G V+ A    D++ 
Sbjct: 96  LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 155

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   +   Y  ++   C++G    A + L  +  R    D    + +I A C      
Sbjct: 156 AQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQL-- 213

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A+ L  EM  KG   +V T+  LI G C  G  ++A  L L ++      P+V+TY
Sbjct: 214 -VSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGL-LNVMVLKTINPDVYTY 271

Query: 336 TAMISGYCKEEKMNRAEM-------LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           T ++   CKE K+  A+        L++ M+++G   +  TY+SLI G CK G+ +RA  
Sbjct: 272 TILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 331

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L + M  +G  PN++ +  ++DGL K GR+++A E+ +    +    +  TY ++++ H 
Sbjct: 332 LFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 391

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           KQ   ++AL +  +M   G  P+   + T+I A  ++ +  ++EK  ++ I  GL 
Sbjct: 392 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 162/322 (50%), Gaps = 8/322 (2%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           KG +P+++T  +LI+  C  G     F +  K+++   Y P+  T   +I G C + ++ 
Sbjct: 87  KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR-GYPPSTVTLNTLIKGLCLKGQVK 145

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A    +++  QG   N   Y +LI G CK+G+   A  L+  +      P++  Y+ II
Sbjct: 146 KALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTII 205

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           D LCK   V EAY L  +   + + AD +TY  L+       + K+A+GL   MV   +N
Sbjct: 206 DALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTIN 265

Query: 470 PDIHAYTTLIAAFCRQKKMKESEK-------FFQEAITAGLFPTKETYTSMICGYLRDGN 522
           PD++ YT L+ A C++ K+KE+++          E    G      TY+S+I G  ++G+
Sbjct: 266 PDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 325

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A+  F +M   G  P+  T+  L+ GL K  +L +A + ++ ++ KG      T   
Sbjct: 326 LDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 385

Query: 583 LAYEYCKQGDSATAMIILESLD 604
           +   +CKQG    A+ +L  ++
Sbjct: 386 MINGHCKQGLLEEALTMLSKME 407



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 165/359 (45%), Gaps = 11/359 (3%)

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +G   D  TL +LI  FC     G I   F +L +++++G+ P+  T   LI GLC KG 
Sbjct: 87  KGIQPDLFTLNILINCFCH---MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 143

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            +KA     KL+ +  ++ N   Y  +I+G CK      A  LL+++  +   P+   Y+
Sbjct: 144 VKKALHFHDKLL-AQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYS 202

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I   CK      AY L   M  +G + ++  YN +I G C  G+++EA  LL     +
Sbjct: 203 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLK 262

Query: 432 ELQADKITYTILLSEHLKQAETKQA-------LGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +  D  TYTIL+    K+ + K+A         L   M   G   D+  Y++LI   C+
Sbjct: 263 TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 322

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              +  +   F +    G+ P   T+T ++ G  + G +  A + FQ +   G   +  T
Sbjct: 323 NGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYT 382

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           Y  +I+G CKQ  L+EA      M   G  P   T  T+     K+ ++  A  +L  +
Sbjct: 383 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 135/340 (39%), Gaps = 46/340 (13%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +  +    L  R++ +G+ P+  T   LI   C +G     +
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTVS-LSHRLELKGIQPDLFTLNILINCFCHMGQITFGF 113

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY------------------------- 422
            ++  + K G  P+    N +I GLC KG+V++A                          
Sbjct: 114 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGV 173

Query: 423 ----------ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
                     +LLKK   R  + D + Y+ ++    K     +A GLF  M   G++ D+
Sbjct: 174 CKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 233

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK---- 528
             Y TLI  FC   K+KE+       +   + P   TYT ++    ++G +  A +    
Sbjct: 234 VTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISY 293

Query: 529 ---YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
                  M   G   D ITY +LI GLCK   LD A   +  M  +GI P   T   L  
Sbjct: 294 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLD 353

Query: 586 EYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
              K G    A  + + L  K   L + T N +I   C +
Sbjct: 354 GLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 393



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 4/135 (2%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  AV  F RM  +   P  I +  ++    K  K          +  KGI P   T  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKM-KHYSTVSLSHRLELKGIQPDLFTLN 97

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   +C  G       +L  + K+ +     T+NTLI+ LC + +V  A  F  KLL +
Sbjct: 98  ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 157

Query: 639 DQNVDRVSLAALKNA 653
              +++V    L N 
Sbjct: 158 GFQLNQVGYGTLING 172


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 221/460 (48%), Gaps = 19/460 (4%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS-----------FAEIGRLKEGFSMV 176
           KF  + + + +     + NG FE    V   MV             F    + +    + 
Sbjct: 130 KFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLC 189

Query: 177 IE----MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           +E    M ++G+ +   +L  VV   C  G VE ++++  E   +G+  +A +Y  ++ A
Sbjct: 190 LEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINA 249

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           Y +    +  ++ L  M   G + +  T TLLI      G    +++ F+   EM  +G 
Sbjct: 250 YLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFD---EMRERGI 306

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           + +++ +T LI   C+KG  ++AF LF +L       P+ HTY A+I G CK  +M  AE
Sbjct: 307 ESDIHVYTSLISWNCRKGNIKRAFLLFDELTEK-GLLPSSHTYGALIDGVCKVGEMGAAE 365

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           +L+  M+ +G+      + +LI G+C+ G  + A  + D+M K+G   +++  N I    
Sbjct: 366 ILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCF 425

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            +  R  EA + L +  +  ++   ++YT L+  + K+   ++A  LF  M    + P+ 
Sbjct: 426 NRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNA 485

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y  +I A+C+Q K+KE+ K +      G+ P   TYTS+I G     N+  A++ F  
Sbjct: 486 ITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 545

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           M   G   +++TY  +ISGL K  K DEA   Y+ +  KG
Sbjct: 546 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKG 585



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 158/612 (25%), Positives = 268/612 (43%), Gaps = 85/612 (13%)

Query: 40  LANSKQPAFSSTS-------SSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDI 92
           L N KQP  S  +       S+PS   +L   V  +VL           S P L  Q  I
Sbjct: 13  LFNVKQPEESRRAWWIGKLQSNPSLLFNLNSNVTRLVL-----------SDPSLATQSCI 61

Query: 93  DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHF--MRLYIVCATSLISNGNFE 150
           D     +     ++L  +  ++V LS   ++      R F  MRL +    S++++G +E
Sbjct: 62  DFFKFLREFE--SNLKPDLTAVVTLSHRLYS-----NRRFSEMRLLL---NSVVNDGFYE 111

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMV-IEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           R  E +               G +MV  +++           + V  +  + G+ E    
Sbjct: 112 RPVEGL---------------GSAMVDCDISEEKFEFWEKFFDLVFRVYVDNGMFEEGLR 156

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           VFD M  +G+  D  S  + +VA  +  R+     +   M+D G  +   +LT+++   C
Sbjct: 157 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLC 216

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI---------------------DGLC- 307
               RG ++++ +L++E   KG KP  YT+  +I                     DG+  
Sbjct: 217 R---RGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVY 273

Query: 308 -------------KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
                        K G      +LF ++ R    + ++H YT++IS  C++  + RA +L
Sbjct: 274 NKVTYTLLIELSVKNGKMNDVEKLFDEM-RERGIESDIHVYTSLISWNCRKGNIKRAFLL 332

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            + + E+GLLP+++TY +LI G CKVG    A  LM+ M  +G       +N +I+G C+
Sbjct: 333 FDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCR 392

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG + EA  +     ++  QAD  T   + S   +     +A     RM++ G+     +
Sbjct: 393 KGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVS 452

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT LI  +C++  ++E+++ F E  +  + P   TY  MI  Y + G +  A K +  M 
Sbjct: 453 YTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMK 512

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  PD+ TY +LI G C    +DEA + +  M  KG+    VT   +     K G S 
Sbjct: 513 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 572

Query: 595 TAMIILESLDKK 606
            A  + + + +K
Sbjct: 573 EAFGLYDEIKRK 584


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 209/417 (50%), Gaps = 8/417 (1%)

Query: 140 ATSLISN---GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
           A SL+ N     F+    ++  ++      GR+ E  S++ E  + G          ++ 
Sbjct: 124 AFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIIN 183

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
             C++G    A ++F +M    V  +   Y  ++   C+ G V EA    + M++ G  L
Sbjct: 184 GLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIEL 243

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKA 315
           D  +   +I  FC  G     + A +LL+EMV +G   P+VYT  +LIDGLCK G   +A
Sbjct: 244 DVYSYNSMIHGFCSVG---RFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA 300

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           + +   +++   +KP++ +Y A+++GYC    +  A+ + ++M E+  LPN  +Y +LI 
Sbjct: 301 YNVVAVMIKR-GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLIN 359

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G+CKV   + A  L+  M  +   P+   YN ++DGL K GR    ++L++        A
Sbjct: 360 GYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPA 419

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D ITY +LL ++ K  +  +AL LF  +++ G++P+I  Y  L+   C+  ++K +++ F
Sbjct: 420 DLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIF 479

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           Q     G  P   TY  MI G  ++G +  A     +M      P+ IT+  ++  +
Sbjct: 480 QLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 206/419 (49%), Gaps = 8/419 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++ A+ ++G++  A   L  +L  G  +D   LT L+   C    +G + +A  LL
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLC---LKGRVLEAVSLL 163

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            E V +G++ +   +  +I+GLCK G T  A ++F K+ +   Y PN+  Y  +I G CK
Sbjct: 164 HEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVY-PNLIMYNTVIDGLCK 222

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIY 403
           +  ++ A  L   M E G+  +  +Y S+I+G C VG F+ A  L+D M   G   P++Y
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N +IDGLCK GRV EAY ++    +R  + D ++Y  L++ +       +A  +F +M
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V+    P++ +Y TLI  +C+ + + E+     E     L P   TY  ++ G  + G  
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                  + M   G   D ITY  L+    K  K D+A   ++ +I  GISP   T   L
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
               CK G    A  I + L  K     IRT N +I  LC E  +  A    +K++  +
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 198/426 (46%), Gaps = 3/426 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++FA++G++   FS++  +   G  +    L  ++   C  G V  A  +  E   RG
Sbjct: 111 LINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRG 170

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   Y  ++   C++G+  +A +    M       +      +I   C +G    + 
Sbjct: 171 FRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGL---VD 227

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L  EMV  G + +VY++  +I G C  G  + A +L  ++V      P+V+T+  +
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNIL 287

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  +++ A  ++  M ++G  P+  +Y +L+ G+C  G+   A  + D M +   
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTA 347

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+ +Y  +I+G CK   V EA  LL +   + L  D +TY  LL    K   +     
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M  +G   D+  Y  L+  + + +K  ++   FQ  I  G+ P   TY  ++ G  
Sbjct: 408 LVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLC 467

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +  A + FQ ++  GC P+  TY  +I GLCK+  LDEA      M+     P  +
Sbjct: 468 KSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYI 527

Query: 579 TRVTLA 584
           T  T+ 
Sbjct: 528 TFDTIV 533



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 69/325 (21%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G + E   +  EM  NG+ L   + N ++   C +G  + A ++ DEM  RG
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRG 275

Query: 219 -VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            V  D  ++ +++   C++GRV+EA   ++ M+ RG   D  +   L+  +C  G  G  
Sbjct: 276 KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEA 335

Query: 278 KQAFE--------------------------------LLEEMVRKGWKPNVYTHTVLIDG 305
           KQ F+                                LL EM  K   P+  T+  L+DG
Sbjct: 336 KQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDG 395

Query: 306 LCKKG-----WT------------------------------EKAFRLFLKLVRSDNYKP 330
           L K G     W                               +KA  LF  ++      P
Sbjct: 396 LSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI-GISP 454

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+ TY  ++ G CK  ++  A+ + + +  +G  PN  TY  +I+G CK G  + A  L+
Sbjct: 455 NIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKK 415
             M      PN   ++ I+  +  K
Sbjct: 515 YKMVNNNYLPNYITFDTIVRAILVK 539



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 9/256 (3%)

Query: 405 YNAIIDGLCKKGR---VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +N ++  L K  R   V   Y +L+   +  ++   IT++IL++   +  +   A  L  
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQS--KPTIKPSLITFSILINAFAQLGQMGFAFSLLG 129

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            ++K G   D+   TTL+   C + ++ E+     E +  G    +  Y ++I G  + G
Sbjct: 130 NILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIG 189

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
               A++ F +M +I   P+ I Y  +I GLCKQ  +DEAC     M+  GI     +  
Sbjct: 190 KTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYN 249

Query: 582 TLAYEYCKQGDSATAMIILESL--DKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           ++ + +C  G    A+ +L+ +    K++  + T N LI  LC   RV  A      ++ 
Sbjct: 250 SMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIK 309

Query: 638 KDQNVDRVSLAALKNA 653
           +    D VS  AL N 
Sbjct: 310 RGWKPDIVSYNALMNG 325



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 10/273 (3%)

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           L  K    P++  ++ +I+   + G++  A+ LL    +   Q D    T L+     + 
Sbjct: 95  LQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKG 154

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A+ L    V  G   D   Y T+I   C+  K +++ + F +     ++P    Y 
Sbjct: 155 RVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYN 214

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G  + G +  A      M + G   D  +Y ++I G C   +   A +  + M+ +
Sbjct: 215 TVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVR 274

Query: 572 G-ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGM 627
           G + P   T   L    CK G  + A  ++  + K+ W   I + N L+   C    VG 
Sbjct: 275 GKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGE 334

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
           A   F K+      V+R +L  + + C   N Y
Sbjct: 335 AKQVFDKM------VERTALPNVISYCTLINGY 361


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 210/448 (46%), Gaps = 30/448 (6%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M  RG   D+ T ++++   C  G    + +A ELL ++   G K NV T++V+IDG CK
Sbjct: 64  MQRRGYPPDDFTYSIVLRGLCKAG---ELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               + A  +F  +       P+V T+ +++ G C  E+M+ A +L E M + G  PN  
Sbjct: 121 ASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           +Y++L+ G CK G  + A  L + M ++ C P++ AY + + GLCK  RV EA +  +K 
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 429 FQRELQADKITYTILLS----------------EHL-KQAETKQALGLFCRMVKAGLNPD 471
             +  +AD + ++ ++                 EHL +     +A   F  M+     P 
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF---PTKETYTSMICGYLRDGNISSAVK 528
              + TLI A C+ K++ +    FQ   +   F   P  ETY  M+    +   +  A +
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
               M   G +PD +TY AL+ GLCK  KLD AC   E M  +G+ P   T  ++     
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420

Query: 589 KQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           K G    A+  LE++  +     + T NTL+  LC   R+  A  F  K++      D  
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 646 S----LAALKNACYESNKYALFSDLSQR 669
           S    + AL  +   +  +A+F ++ +R
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKR 508



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 21/422 (4%)

Query: 168 RLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           R+ E F +   M   G  P + S    + G+ C+ G ++ A  +++EM  +    D  +Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGL-CKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------- 273
              V   C+  RV EA      M+ +G+  D    + +I   C KG              
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 274 -RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY--KP 330
             G + +A +  EEM+ +   P+      LI  +CK         LF ++     +   P
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+ TY  M+   CK ++++ A+ L+  M   GL P+  TY++L+ G CK+G  +RA DL+
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           + M KEG  P+ +   +I++ L K G+V  A   L+    R    D +TY  LL    K 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A+    +MV A   PD+ +YT +I A CR  +   +   FQE +  G+ P    Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            S++ G  R+G    A++  +      C PD + +  ++ GLCK  K ++AC+  E M  
Sbjct: 518 HSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574

Query: 571 KG 572
            G
Sbjct: 575 AG 576



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 7/286 (2%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    MV +  +  +L E   +V EM N GL     T + +V   C+LG ++ A ++ +E
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV  D+ +   ++ A  + G+V  A   L  M  RG+  D  T   L+   C    
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA-- 457

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G I +A   L +MV     P+V+++T++I  LC+ G    A  +F ++V+     P+  
Sbjct: 458 -GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKR-GVLPDTV 515

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y +++ G  +       ++ LE +K     P+   +  ++ G CK G  E A ++++ M
Sbjct: 516 LYHSLLDGLARN---GLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERM 572

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
              G   + + Y  ++ GL K G+V +A +L+  A +     ++++
Sbjct: 573 ADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLS 618


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 249/565 (44%), Gaps = 9/565 (1%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    +SL        L S+ +  H+   P   +    + S+T  +  +
Sbjct: 17  SLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYS 76

Query: 103 VVASLANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMV 160
            V SL+++  S  +  + +   I    F H  RL +     + I     +        ++
Sbjct: 77  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 136

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
                 G++ E   +  +M   G      T   ++   C++G    A  +   M  +G C
Sbjct: 137 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQGNC 195

Query: 221 -ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++ + C+  +VT+A    S M+ +G      T   LI A C+       K 
Sbjct: 196 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN---LCEWKH 252

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              LL EMV     PNV   + ++D LCK+G   +A  +   +++    +PNV TY A++
Sbjct: 253 VTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALM 311

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C   +M+ A  + + M  +G  P+  +Y++LI G+CK+   E+A  L + M ++   
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y+ ++ GLC  GR+Q+A  L  +   R    D ++Y ILL    K     +A+ L
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 431

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +  + ++PDI  YT +I   CR  +++ +   F    + GL P   TYT MI G  +
Sbjct: 432 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 491

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A K F  M + G +P+  TY  +  G  + ++     Q  + M+ +G S    T
Sbjct: 492 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 551

Query: 580 RVTLAYEYCKQG-DSATAMIILESL 603
              L       G D +   I+ E L
Sbjct: 552 STVLVEMLSDDGLDQSVKQILSEFL 576



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 203/429 (47%), Gaps = 39/429 (9%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  +  +  +++ ++C + R+  A   L+ +L  G   + AT   LI   C   
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC--- 140

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +   L ++M+ +G++PNV T+  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 141 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL-LRSMEQGNCQPDV 199

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG--------H------- 377
             YT++I   CK+ ++ +A  L   M  QG+ P+  TY SLI+         H       
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 259

Query: 378 --------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
                               CK G    A+D++D+M K G  PN+  YNA++DG C +  
Sbjct: 260 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 319

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA ++      +    D ++Y+ L++ + K    ++A+ LF  M +  L P+   Y+T
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+   C   +++++   F E +T G  P   +Y  ++    ++  +  A+   + +    
Sbjct: 380 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 439

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD   Y  +I G+C+  +L+ A   + ++  KG+ P   T   +    C+QG  A A 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 598 IILESLDKK 606
            +   + +K
Sbjct: 500 KLFGEMKRK 508



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 8/397 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  PN+YT  +LI+  C       AF +  K+++   ++PN+ T+  +I
Sbjct: 78  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL-GHQPNIATFNTLI 136

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+     L ++M  +G  PN  TY +LI G CKVG+   A  L+  M +  C 
Sbjct: 137 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 196

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V +A+ L  +   + +     TY  L+       E K    L
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              MV + + P++  ++T++ A C++ K+ E+       I  G+ P   TY +++ G+  
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M   G APD ++Y  LI+G CK  ++++A   +E M  K + P  VT
Sbjct: 317 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 376

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +  +  I    +   L+  LC  +R+  A      + 
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436

Query: 637 GKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
           G + + D ++    +   C      A   LFS+LS +
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 473



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 149/369 (40%), Gaps = 73/369 (19%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID---- 410
             RM      P+   +T L+    K+ ++     L   M   G  PNIY  N +I+    
Sbjct: 47  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 106

Query: 411 -------------------------------GLCKKGRVQEAYELLKKAFQRELQADKIT 439
                                          GLC +G++ E   L  K      Q + +T
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L++   K   T  A+ L   M +    PD+  YT++I + C+ +++ ++   F E I
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 500 TAGLFPTKETYTSMI------CGY-----------------------------LRDGNIS 524
             G+ P+  TY S+I      C +                              ++G + 
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A      M + G  P+ +TY AL+ G C +S++DEA + +++M+ KG +P  V+  TL 
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 585 YEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             YCK      AM + E + +K  I    T +TL+  LC   R+  A   FH+++ + Q 
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 642 VDRVSLAAL 650
            D VS   L
Sbjct: 407 PDFVSYCIL 415



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++  +E A  +F+EMC + +  +  +Y  ++   C +GR+ +A      M+ RG I D 
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +  +L+   C K  R  + +A  LL+ +      P++  +T++IDG+C+ G  E A  L
Sbjct: 410 VSYCILLDYLC-KNRR--LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L  S    PNV TYT MI+G C++  +  A  L   MK +G  PN  TY  +  G  
Sbjct: 467 FSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 525

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           +     R   L+  M   G + ++     +++ L   G  Q   ++L +  Q
Sbjct: 526 RNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+ L       AL  F RM+     P I  +T L+ +  + K          +  + G+ 
Sbjct: 32  SKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIP 91

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T   +I  +     +  A     ++ ++G  P+  T+  LI GLC + K+ E    
Sbjct: 92  PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 151

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           ++ MIG+G  P  VT  TL    CK G ++ A+ +L S+++   +  +    ++I  LC 
Sbjct: 152 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 211

Query: 622 EKRVGMAALFFHKLL 636
           +++V  A   F +++
Sbjct: 212 DRQVTQAFNLFSEMI 226


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 201/420 (47%), Gaps = 22/420 (5%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+LG ++ A + F EM  +    D  +Y  ++   C+  RV EA   L  M
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G + +  T  +LI A    G    + +A +L++ M  KG  PN  T+  LI GLC K
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNG---DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 316

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KA  L  K+V S    PN  TY  +I+G  K+ +      +L  M+E+G   N   
Sbjct: 317 GKLDKALSLLEKMV-SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI G  K G  E A  L   M ++GC PN+  Y A IDGLC+  +  EA ++L++  
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    +  TY+ L+    K+ ++++A+ ++  M+   +  ++   + L+   C   +++
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN--QIGCAPDNITYGA 547
           E+   +   +  GL P    Y+SMI G    G++   +K F  M   +    PD +TY  
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L + LC+Q  L  A     SM+ +G  P                DS T  I LE+L +++
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEGCDP----------------DSLTCNIFLETLRERI 599



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 11/394 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  L+I A C     G I +A +   EM  K   P+V+T++ L++GLCK+   ++A  L 
Sbjct: 200 TYNLIIKALCK---LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL- 255

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++++   PN  T+  +I    K   ++RA  L++ M  +G +PN  TY +LI+G C 
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L++ M    C PN   Y  II+GL K+ R ++   +L    +R  +A++  
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ +++ A+ L+  M + G  P++  Y   I   CR +K  E+E   QE +
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           + G  P   TY+S++ G+ + G+   A+  ++ M       + +    L++GLC+  +L 
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD-----KKLWIRTVNT 614
           EA   +  M+G+G+ P  V   ++    C  G     + +   +       +  + T N 
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
           L   LC +  +  A    + +L  D+  D  SL 
Sbjct: 556 LFNALCRQDNLTRAIDLLNSML--DEGCDPDSLT 587



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 207/439 (47%), Gaps = 16/439 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADR---WLSAMLDR----GAILDNATLTLLITAFCDKGFRGSI 277
           SYKL    + R+       R   ++  +LDR    G +L   T+ +LI   C K      
Sbjct: 84  SYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVL-TETIFILIFKACGKAHLPG- 141

Query: 278 KQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL--VRSDNYKPNVHT 334
            +A      M      K  V +   +++ + ++G    AF+ +L +    S  ++PN+ T
Sbjct: 142 -EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLT 200

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I   CK  +++RA      M  +   P+  TY++L+ G CK    + A  L+D M 
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            EGC PN   +N +ID L K G +  A +L+   F +    +++TY  L+     + +  
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L  +MV +   P+   Y T+I    +Q++ ++           G    +  Y+S+I
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  ++G   +AV+ ++ M + GC P+ + YGA I GLC+  K DEA    + M+ KG  
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 575 PCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
           P   T  +L   + K+GDS  A+++   + S D +  +   + L+  LC   R+  A   
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 500

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           +  +LG+    D V+ +++
Sbjct: 501 WTHMLGEGLKPDVVAYSSM 519



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 196/470 (41%), Gaps = 72/470 (15%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   ++ EM   G      T N ++    + G +  A ++ D M  +G   +  +Y 
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 307

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C  G++ +A   L  M+    + +  T   +I     +      +    +L  M
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ---RRAEDGVHILMSM 364

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G K N Y ++ LI GL K+G +E A RL+ K +     KPNV  Y A I G C++EK
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLW-KEMAEKGCKPNVVVYGAFIDGLCRDEK 423

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + AE +L+ M  +G LPN  TY+SL+ G  K G+ ++A  +   M  +    N+   + 
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +++GLC+ GR++E                                   AL ++  M+  G
Sbjct: 484 LLNGLCESGRLRE-----------------------------------ALTVWTHMLGEG 508

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQE--AITAGLFPTKETYTSMICGYLRDGNISS 525
           L PD+ AY+++I   C    + +  K F E         P   TY  +     R  N++ 
Sbjct: 509 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 568

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV---T 582
           A+     M   GC PD++T                 C  +   + + I+P +  R+    
Sbjct: 569 AIDLLNSMLDEGCDPDSLT-----------------CNIFLETLRERINPPQDGRLFLDE 611

Query: 583 LAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEKRV 625
           L     K+    +A+ I+E +       +   W R    +I++ C  KR+
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSR----VIQRTCKPKRI 657



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 17/211 (8%)

Query: 455 QALGLFCRMVKAGLNPDIH------AYTTLIAAFCRQKKMKESEKFFQEAITA---GLFP 505
           +A+  F RM       D+H      ++ +++    ++     + KF+     A   G  P
Sbjct: 142 EAVNFFHRMAN-----DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP 196

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY  +I    + G I  AV  F+ M    C PD  TY  L++GLCK+ ++DEA    
Sbjct: 197 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 256

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSE 622
           + M  +G  P  VT   L     K GD + A  +++++  K  +    T NTLI  LC +
Sbjct: 257 DEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 316

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++  A     K++      ++V+   + N 
Sbjct: 317 GKLDKALSLLEKMVSSKCVPNQVTYGTIING 347



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)

Query: 153 HEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEE 209
           H V+ C  +++   E GRL+E  ++   M   GL P + +  + + G+ C++G V+   +
Sbjct: 476 HNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL-CDVGSVDKGLK 534

Query: 210 VFDEM-CARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           +F EM C       D  +Y ++  A CR   +T A   L++MLD G   D+ T  + +  
Sbjct: 535 LFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 594

Query: 268 -------------FCDKGFRGSIKQ-----AFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
                        F D+     +K+     A  ++EEM+ +   P   T + +I   CK
Sbjct: 595 LRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 653


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 242/539 (44%), Gaps = 19/539 (3%)

Query: 38  NFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTH 97
           +FL N   P   S   S  P    V       L  +++   +R +PP +     +DS   
Sbjct: 20  SFLPNPSLPKLHSHFHSRPPSFENVDDA----LFQFHRMLCMRHTPPIIQFNKILDSFAK 75

Query: 98  EQAITVVASLANEAG-SMVALSFFYWAIGFAKFRHFMRLYIVCAT-SLISNGNFERAHEV 155
            +    V SL+       +   FF   I    F H  ++ +  +  S I    ++     
Sbjct: 76  MKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVT 135

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++      G++K+      ++   G  L   +   ++   C++G    A ++   + 
Sbjct: 136 LTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRID 195

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R    +   Y  ++   C+   V+EA    S M  +G   +  T + +I  FC     G
Sbjct: 196 GRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFC---IVG 252

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A   L EMV K   P+VY +  L+D L K+G  ++A  +   +V++   KPNV TY
Sbjct: 253 KLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKT-CLKPNVITY 311

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I GY K         +   +   G+ P+  +Y  +I   CK+   E A +L   M +
Sbjct: 312 NTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQ 363

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +   PN   YN++IDGLCK GR+  A++L+ +   R   A+ ITY  L++   K  +  +
Sbjct: 364 KNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDK 423

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLI-AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A+ L  +M   G+ PD++    L+    C+ K++K ++  FQ+ +  G  P   TY  +I
Sbjct: 424 AIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIII 483

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            G+ ++G +  A     +M   GC+P+ IT+  +I  L ++ + D+A +    MI +G+
Sbjct: 484 YGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 16/410 (3%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           + +  D  +  +++  +C +G++  A   LS +L  G   D  TLT LI   C    +G 
Sbjct: 92  KAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLC---LKGQ 148

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A    ++++ +G++ +  ++  LI+G+CK G T  A +L L+ +     +PNV  Y 
Sbjct: 149 VKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQL-LRRIDGRLTEPNVVMYN 207

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK + ++ A  L   M  +G+  N  TY+++I+G C VG    A   ++ M  +
Sbjct: 208 TIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
              P++Y YN ++D L K+G+V+EA  +L    +  L+ + ITY  L+  + K      A
Sbjct: 268 AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVF--NA 325

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +GL       G+ PD+ +Y  +I   C+ K+++E+   ++E     + P   TY S+I G
Sbjct: 326 VGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDG 379

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G IS A      M+  G   + ITY +LI+GLCK  +LD+A      M  +GI P 
Sbjct: 380 LCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPD 439

Query: 577 EVT-RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
             T  + L    CK      A  + + L  K +   + T N +I   C E
Sbjct: 440 MYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKE 489



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 175/356 (49%), Gaps = 14/356 (3%)

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
           K  +P+ +T  +LI+  C  G    AF +  K+++   Y+P+  T T +I G C + ++ 
Sbjct: 92  KAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKW-GYQPDTVTLTTLIKGLCLKGQVK 150

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A    +++  QG   +  +Y +LI G CK+G    A  L+  +      PN+  YN II
Sbjct: 151 KALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTII 210

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           D LCK+  V EA  L  +   + + A+ +TY+ ++       +  +ALG    MV   +N
Sbjct: 211 DCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAIN 270

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           PD++ Y TL+ A  ++ K+KE++      +   L P   TY ++I GY        A   
Sbjct: 271 PDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHV 322

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F  +  +G  PD  +Y  +I+ LCK  +++EA   Y+ M  K + P  VT  +L    CK
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCK 382

Query: 590 QGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            G  + A  +++ +  +     + T N+LI  LC   ++  A    +K+  KDQ +
Sbjct: 383 SGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKM--KDQGI 436



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 154/339 (45%), Gaps = 5/339 (1%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P +  +  ++  + K +       L  R++ + + P+  T   LI   C +G    A+
Sbjct: 59  HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            ++  + K G  P+      +I GLC KG+V++A     K   +  + D+++Y  L++  
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  ET+ A+ L  R+      P++  Y T+I   C++K + E+   F E    G+    
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANV 238

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+++I G+   G ++ A+ +   M      PD   Y  L+  L K+ K+ EA      
Sbjct: 239 VTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAV 298

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
           ++   + P  +T  TL   Y K   +A  ++    +   +W  + N +I +LC  KRV  
Sbjct: 299 IVKTCLKPNVITYNTLIDGYAKHVFNAVGLM---GVTPDVW--SYNIMINRLCKIKRVEE 353

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           A   + ++  K+   + V+  +L +   +S + +   DL
Sbjct: 354 ALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 113/206 (54%), Gaps = 3/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   +I R++E  ++  EM    +   T T N ++   C+ G + YA ++ DEM  RG
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             A+  +Y  ++   C+ G++ +A   ++ M D+G   D  TL +L+     KG R  +K
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR--LK 458

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L ++++ KG+ PNVYT+ ++I G CK+G  ++A+ L  K+  S    PN  T+  +
Sbjct: 459 NAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDS-GCSPNAITFKII 517

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I    ++ + ++AE LL  M  +GLL
Sbjct: 518 ICALLEKGETDKAEKLLCEMIARGLL 543



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 7/137 (5%)

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  A+  F RM  +   P  I +  ++    K             +  K I P   T  
Sbjct: 43  NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW-----IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            L   +C  G    A  +L  + K  W       T+ TLI+ LC + +V  A  F  KLL
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILK--WGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 637 GKDQNVDRVSLAALKNA 653
            +   +D+VS   L N 
Sbjct: 161 AQGFRLDQVSYGTLING 177


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 249/565 (44%), Gaps = 9/565 (1%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    +SL        L S+ +  H+   P   +    + S+T  +  +
Sbjct: 26  SLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYS 85

Query: 103 VVASLANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMV 160
            V SL+++  S  +  + +   I    F H  RL +     + I     +        ++
Sbjct: 86  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 145

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
                 G++ E   +  +M   G      T   ++   C++G    A  +   M  +G C
Sbjct: 146 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQGNC 204

Query: 221 -ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++ + C+  +VT+A    S M+ +G      T   LI A C+       K 
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN---LCEWKH 261

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              LL EMV     PNV   + ++D LCK+G   +A  +   +++    +PNV TY A++
Sbjct: 262 VTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALM 320

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C   +M+ A  + + M  +G  P+  +Y++LI G+CK+   E+A  L + M ++   
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y+ ++ GLC  GR+Q+A  L  +   R    D ++Y ILL    K     +A+ L
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 440

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +  + ++PDI  YT +I   CR  +++ +   F    + GL P   TYT MI G  +
Sbjct: 441 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 500

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A K F  M + G +P+  TY  +  G  + ++     Q  + M+ +G S    T
Sbjct: 501 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 560

Query: 580 RVTLAYEYCKQG-DSATAMIILESL 603
              L       G D +   I+ E L
Sbjct: 561 STVLVEMLSDDGLDQSVKQILSEFL 585



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 203/429 (47%), Gaps = 39/429 (9%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G+  +  +  +++ ++C + R+  A   L+ +L  G   + AT   LI   C   
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC--- 149

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G I +   L ++M+ +G++PNV T+  LI+GLCK G T  A RL L+ +   N +P+V
Sbjct: 150 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL-LRSMEQGNCQPDV 208

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG--------H------- 377
             YT++I   CK+ ++ +A  L   M  QG+ P+  TY SLI+         H       
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 268

Query: 378 --------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
                               CK G    A+D++D+M K G  PN+  YNA++DG C +  
Sbjct: 269 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 328

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA ++      +    D ++Y+ L++ + K    ++A+ LF  M +  L P+   Y+T
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+   C   +++++   F E +T G  P   +Y  ++    ++  +  A+   + +    
Sbjct: 389 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 448

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD   Y  +I G+C+  +L+ A   + ++  KG+ P   T   +    C+QG  A A 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 598 IILESLDKK 606
            +   + +K
Sbjct: 509 KLFGEMKRK 517



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 8/397 (2%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L  +M   G  PN+YT  +LI+  C       AF +  K+++   ++PN+ T+  +I
Sbjct: 87  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL-GHQPNIATFNTLI 145

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C E K+     L ++M  +G  PN  TY +LI G CKVG+   A  L+  M +  C 
Sbjct: 146 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 205

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P++  Y +IID LCK  +V +A+ L  +   + +     TY  L+       E K    L
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              MV + + P++  ++T++ A C++ K+ E+       I  G+ P   TY +++ G+  
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  AVK F  M   G APD ++Y  LI+G CK  ++++A   +E M  K + P  VT
Sbjct: 326 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 385

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLL 636
             TL +  C  G    A+ +   +  +  I    +   L+  LC  +R+  A      + 
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445

Query: 637 GKDQNVD-RVSLAALKNACYESNKYA---LFSDLSQR 669
           G + + D ++    +   C      A   LFS+LS +
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 482



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 149/369 (40%), Gaps = 73/369 (19%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID---- 410
             RM      P+   +T L+    K+ ++     L   M   G  PNIY  N +I+    
Sbjct: 56  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 115

Query: 411 -------------------------------GLCKKGRVQEAYELLKKAFQRELQADKIT 439
                                          GLC +G++ E   L  K      Q + +T
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L++   K   T  A+ L   M +    PD+  YT++I + C+ +++ ++   F E I
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 500 TAGLFPTKETYTSMI------CGY-----------------------------LRDGNIS 524
             G+ P+  TY S+I      C +                              ++G + 
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A      M + G  P+ +TY AL+ G C +S++DEA + +++M+ KG +P  V+  TL 
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 585 YEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             YCK      AM + E + +K  I    T +TL+  LC   R+  A   FH+++ + Q 
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 642 VDRVSLAAL 650
            D VS   L
Sbjct: 416 PDFVSYCIL 424



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++  +E A  +F+EMC + +  +  +Y  ++   C +GR+ +A      M+ RG I D 
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +  +L+   C K  R  + +A  LL+ +      P++  +T++IDG+C+ G  E A  L
Sbjct: 419 VSYCILLDYLC-KNRR--LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L  S    PNV TYT MI+G C++  +  A  L   MK +G  PN  TY  +  G  
Sbjct: 476 FSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 534

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           +     R   L+  M   G + ++     +++ L   G  Q   ++L +  Q
Sbjct: 535 RNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+ L       AL  F RM+     P I  +T L+ +  + K          +  + G+ 
Sbjct: 41  SKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIP 100

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T   +I  +     +  A     ++ ++G  P+  T+  LI GLC + K+ E    
Sbjct: 101 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 160

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
           ++ MIG+G  P  VT  TL    CK G ++ A+ +L S+++   +  +    ++I  LC 
Sbjct: 161 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 220

Query: 622 EKRVGMAALFFHKLL 636
           +++V  A   F +++
Sbjct: 221 DRQVTQAFNLFSEMI 235


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A ++
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCS---RGRVQAALDI 536

Query: 284 LEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  PN YT+  +I G CK G  ++A ++F +++     KP    Y A+I GY
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 596

Query: 343 CKEEKMNRAEMLLERMKE-----------------------------------QGLLPNT 367
           C + K++ A +  +RM E                                   +GL P+ 
Sbjct: 597 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 656

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI GHCK GN ++A ++ + M + G    +  Y A+I  L KKG+VQE  +L  +
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A +R ++ D + Y  L++ H       +A  +   M K  + PD   Y TL+   C   +
Sbjct: 717 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 776

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E    G+ P   TY ++I GY   G++  A++    M   G  P  +TY A
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+  GI+P + T ++L
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +++   C  G      +A ELL +M R    PN  T+  +I G C +G  + A  + 
Sbjct: 485 TFNIMLRHLCSAG---KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 537

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHC 378
            ++       PN +TY  +ISG+CK  +++ A  + + M  +G + P    Y +LI G+C
Sbjct: 538 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 597

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  + A    D M + G    +  YN ++  L   GR  EAYEL+++   + L  D  
Sbjct: 598 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL++ H K+   K+AL +F  M + G+   +  YT LI A  ++ +++E++K F EA
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P    Y ++I  +   GNI  A +    M +   APD++TY  L+ GLC   ++
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +  + M  +GI P  VT  TL   Y  +GD   A+ I   +  K +   + T N L
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837

Query: 616 IRKLC 620
           I+ LC
Sbjct: 838 IQGLC 842



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 202/444 (45%), Gaps = 24/444 (5%)

Query: 117 LSFFYWAIGFAKFRHFMRLYI-VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           LS    A  FA F    RL + +C T+                M+      G+      +
Sbjct: 459 LSALPSAPAFALFADMFRLRLPLCTTTF-------------NIMLRHLCSAGKPARALEL 505

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG-VCADASSYKLMVVAYC 234
           + +M          T N V+   C  G V+ A ++  EM  RG +  +  +Y  ++  +C
Sbjct: 506 LRQMPRPN----AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 561

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           ++GRV EA +    ML +G +   A +   LI  +CD+G    +  A    + MV +G  
Sbjct: 562 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG---KLDTALLYRDRMVERGVA 618

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
             V T+ +L+  L   G   +A+ L  ++       P+V TY  +I+G+CKE  + +A  
Sbjct: 619 MTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALE 677

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           + E M  +G+     TYT+LIY   K G  +    L D   + G  P++  YNA+I+   
Sbjct: 678 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 737

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             G +  A+E++ +  ++ +  D +TY  L+          +A  L   M + G+ PD+ 
Sbjct: 738 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 797

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y TLI+ +  +  +K++ +   E +  G  PT  TY ++I G  ++G    A    + M
Sbjct: 798 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 857

Query: 534 NQIGCAPDNITYGALISGLCKQSK 557
            + G  PD+ TY +LI GL  + +
Sbjct: 858 VENGITPDDSTYISLIEGLTTEDE 881



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           FRL L L  +        T+  M+   C   K  RA  LL +M      PN  TY ++I 
Sbjct: 475 FRLRLPLCTT--------TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 376 GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-EL 433
           G C  G  + A D+M ++  + G  PN Y Y  +I G CK GRV EA ++  +   + E+
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + + Y  L+  +  Q +   AL    RMV+ G+   +  Y  L+ A     +  E+ +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL P   TY  +I G+ ++GN+  A++ F+ M++ G     +TY ALI  L 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++ E  + ++  + +GI P  V    L   +   G+   A  I+  ++KK       
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           T NTL+R LC   RV  A     ++  +    D V+   L
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 802


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 224/473 (47%), Gaps = 15/473 (3%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+   V+ A ++  EM  +G   D  SY  ++ +  ++G+V EA R LS  
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-RELSIR 244

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                 + NA    LI  FC +     +K+ F LL +MV KG  PNV T++ +I  L   
Sbjct: 245 FQPNVSVYNA----LINGFCREY---KVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGI 297

Query: 310 GWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           G  E A  ++ K+ VR     PNV+T+T+++ GY    ++  A  +  RM E+G  PN  
Sbjct: 298 GNVELALAVWAKMFVRG--CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y +LI+G C  G    A  +   M + GC+PN+  Y A+IDG  K G +  A E+  K 
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  + + YT +++   + +   QA  L  +M      P+   + T I   C   ++
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           + +   F +    G  P  +TY  ++ G L++  I  A++    M + G   + +TY  +
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-KL 607
             G C   K +EA +    M+  G+ P  +T  TL Y YC QG   TA+ +L+ L     
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595

Query: 608 WIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES 657
           W+  V    +L+  +C++  V  A L+  K+L +   ++  +  AL    + S
Sbjct: 596 WVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 198/405 (48%), Gaps = 5/405 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F+    V   +++ F    ++KE F ++ +M   G+     T + V+     +G VE A 
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            V+ +M  RG   +  ++  ++  Y   GRV EA    + M + G   +      LI   
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C  G  G   +A  +  +M R G  PNV T+  LIDG  K G    A  ++ K++ ++  
Sbjct: 365 CSHGKMG---EAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM-TNGC 420

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PNV  YT+M++  C+    ++A  L+E+M      PNT T+ + I G C  G  E A +
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN 480

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L   M + GC+PNI  YN ++DGL K+ R++EA EL+ +  ++ ++ + +TY  +     
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFC 540

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-PTK 507
              + ++AL L  +M+  G+ PD   Y TL  A+C Q K+K + +   +    G + P  
Sbjct: 541 NVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEV 600

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
             YTS++ G      +  AV Y  +M   G   +  T+ AL+ GL
Sbjct: 601 AAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 14/327 (4%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   F  +  S  ++    TY  MI    +E  ++  + LL++MK +G+  + + + ++I
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVI 121

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + +VG  E+A  +   + + GC P +  YN ++D +  + R Q    +     +   +
Sbjct: 122 NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE 181

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY ILL    K      A  L   M   G  PD+ +YTT+I++  +  K++E+ + 
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 495 ---FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              FQ        P    Y ++I G+ R+  +        +M + G  P+ ITY  +IS 
Sbjct: 242 SIRFQ--------PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT 611
           L     ++ A   +  M  +G SP   T  +L   Y  +G    A+ I   + ++ +   
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353

Query: 612 V---NTLIRKLCSEKRVGMAALFFHKL 635
           V   NTLI  LCS  ++G A     K+
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKM 380



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 8/160 (5%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N +  +EV+  ++       R+KE   +V EM   G+ L   T N + G  C +G  E A
Sbjct: 493 NIKTYNEVLDGLLKE----NRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEA 548

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA-ILDNATLTLLIT 266
            ++  +M   GV  DA +Y  +  AYC  G+V  A + L  +   G  + + A  T L+ 
Sbjct: 549 LKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLW 608

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             C+   +  +++A   L++M+ +G   N  T   L+ GL
Sbjct: 609 GICN---QIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 228/504 (45%), Gaps = 58/504 (11%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V S  ++G L      +    N+ + +   T N V+   C+ GLV+    +  EM 
Sbjct: 132 VNVLVHSLCKVGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMV 189

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG+C D+ +  ++V  YCR+G V  A+  +  ++D G   D   L  LI  +C+     
Sbjct: 190 KRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVL-- 247

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV------------ 323
            + QA EL+E   R   K ++ T+  L+   CK G   +A  LF +++            
Sbjct: 248 -MSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306

Query: 324 ------RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
                    N +P + TYT +I+ YCK   +  +  L ++M   G++P+  T +S++YG 
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G    A  L   M + G  PN  +Y  II+ L K GRV EA+ L  +   R +  D 
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +T T ++    K  +TK+A  +F  ++K  L P+   Y+ L+  +C+  KM+ +E   Q+
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG------ 551
                + P   T++S+I GY + G +S AV   + M Q    P+ I Y  LI G      
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 552 ------LCKQSK-----------------------LDEACQFYESMIGKGISPCEVTRVT 582
                  CK+ K                       +DEA      M  KGI P  V   +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 583 LAYEYCKQGDSATAMIILESLDKK 606
           L   Y K+G+   A+ I++ + +K
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEK 630



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 37/458 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCA-------------------RGVCADASSYKLMV 230
           T N ++   C+ G +  AE +F+E+                     + +     +Y  ++
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            AYC+   V E+      M+  G + D  T + ++  FC     G + +A  L  EM   
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCR---HGKLTEAAVLFREMYEM 385

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RSDNYKPNVHTYTAMISGYCKEEKMN 349
           G  PN  ++  +I+ L K G   +AF L  ++V R  ++  ++ T T ++ G  K  K  
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF--DIVTCTTVMDGLFKVGKTK 443

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE + E + +  L PN  TY++L+ G+CK+G  E A  ++  M KE   PN+  +++II
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA-GL 468
           +G  KKG + +A ++L++  QR +  + I Y IL+  + K  E   A   FC+ +K+  L
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA-DDFCKEMKSRRL 562

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
                 +  L+    R  +M E+     +  + G+ P    Y S+I GY ++GN  +A+ 
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDE--ACQFYESMIGKGISPCEVTRVTLAYE 586
             Q M +     D + Y ALI GL +  K D    C     MI  G++P  +T  T+   
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCS---RMIELGLAPDCITYNTIINT 679

Query: 587 YCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLC 620
           YC +G +  A+ IL  + K   I     T N LI  LC
Sbjct: 680 YCIKGKTEDALDILNEM-KSYGIMPNAVTYNILIGGLC 716



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 200/450 (44%), Gaps = 62/450 (13%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNAT 260
           GLV   + ++ +M   GV  D  S  ++V + C++G   + D  L  + +   + +DN T
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVG---DLDLALGYLRNNDVVDIDNVT 164

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
              +I  FC KG    + Q F LL EMV++G   +  T  +L+ G C+ G  + A  +  
Sbjct: 165 YNTVIWGFCQKGL---VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMY 221

Query: 321 KLV-----------------------------------RSDNYKPNVHTYTAMISGYCKE 345
            LV                                   RSD  K ++ TY  ++  +CK 
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSD-VKIDIVTYNTLLKAFCKT 280

Query: 346 EKMNRAEMLL----------ERMKE---------QGLLPNTNTYTSLIYGHCKVGNFERA 386
             + RAE L           +R+K          + L P   TYT+LI  +CK    E +
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + L   M   G  P++   ++I+ G C+ G++ EA  L ++ ++  L  + ++Y  +++ 
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINS 400

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K     +A  L  +MV  G++ DI   TT++    +  K KE+E+ F+  +   L P 
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY++++ GY + G +  A    Q+M +    P+ IT+ ++I+G  K+  L +A     
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            M+ + + P  +    L   Y K G+   A
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVA 550



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 219/527 (41%), Gaps = 82/527 (15%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++S  + GR+ E F++  +M   G+     T   V+    ++G  + AEEVF+
Sbjct: 391 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +    +  +  +Y  ++  YC++G++  A+  L  M       +  T + +I  +  KG
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA----------------- 315
               + +A ++L EMV++   PN   + +LIDG  K G  + A                 
Sbjct: 511 M---LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 567

Query: 316 -FRLFLKLVR----------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
            F + L  ++                S    P++  Y ++I GY KE     A  +++ M
Sbjct: 568 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627

Query: 359 KEQ----------------------------------GLLPNTNTYTSLIYGHCKVGNFE 384
           KE+                                  GL P+  TY ++I  +C  G  E
Sbjct: 628 KEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTE 687

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE--AYELLKKAFQRELQADKITYTI 442
            A D+++ M   G  PN   YN +I GLCK G V     ++ L KA+ R  +ADKI   +
Sbjct: 688 DALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKI---L 744

Query: 443 LLSEHLKQA--ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            + E L  +  E K+   +   MVK G++ D+  Y  LI  +C    ++++ K + +   
Sbjct: 745 QIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFV 804

Query: 501 AGLFPTKETYTSMICGYLRDG----NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
            G+ P   TY +++ G    G     +    K    MN+ G  P+  TY  L+SG  +  
Sbjct: 805 DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVG 864

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
              +    +  MI KG  P   T   L  +Y K G    A  +L  L
Sbjct: 865 NRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDL 911



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 175/350 (50%), Gaps = 22/350 (6%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + Q   +  +M+  G  P+V++  VL+  LCK G  + A      L  +D    +  T
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGY---LRNNDVVDIDNVT 164

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I G+C++  +++   LL  M ++GL  ++ T   L+ G+C++G  + A  +M  + 
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G T ++   N +IDG C+   + +A EL++ +++ +++ D +TY  LL    K  +  
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284

Query: 455 QALGLFCRMVK-------------------AGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           +A  LF  ++                      L P +  YTTLIAA+C+   ++ES   +
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++ I  G+ P   T +S++ G+ R G ++ A   F+ M ++G  P++++Y  +I+ L K 
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            ++ EA      M+ +GIS   VT  T+     K G +  A  + E++ K
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 180/393 (45%), Gaps = 46/393 (11%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYA 207
            E ++ +   ++++   +GR+ E  S++I+M + G+ P I +  + + G   E G    A
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE-GNQLAA 620

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL-SAMLDRGAILDNATLTLLIT 266
             +  EM  + +  D  +Y  ++    R+G+     R++ S M++ G   D  T   +I 
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP--RYVCSRMIELGLAPDCITYNTIIN 678

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C    +G  + A ++L EM   G  PN  T+ +LI GLCK G+               
Sbjct: 679 TYC---IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFV-------------- 721

Query: 327 NYKPNVHTYTAMISGYCKEEK-----------------MNRAEMLLERMKEQGLLPNTNT 369
              P   T+  ++  Y + EK                 + R +++L+ M ++G+  +  T
Sbjct: 722 ---PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVT 778

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG----RVQEAYELL 425
           Y +LI G+C   + E+A      M  +G  PNI  YN ++ GL   G     ++E  +L+
Sbjct: 779 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 838

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +  +R L  +  TY IL+S + +    K+ + L   M+  G  P +  Y  LI+ + + 
Sbjct: 839 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 898

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            KM E+ +   + +T G  P   TY  + CG+L
Sbjct: 899 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 931



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/368 (21%), Positives = 146/368 (39%), Gaps = 29/368 (7%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  +  +I  Y   ++ + A      M+  GL+P    + +L+Y     G   +   +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  P++++ N ++  LCK G +  A   L+      +  D +TY  ++    ++ 
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKG 176

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              Q  GL   MVK GL  D      L+  +CR   ++ +E      +  G+        
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG- 570
           ++I GY     +S A +  +   +     D +TY  L+   CK   L  A   +  ++G 
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 571 ------------------KGISPCEVTRVTLAYEYCK-----QGDSATAMIILESLDKKL 607
                             K + P  VT  TL   YCK     +  S    +I+  +    
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD- 355

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY-ALFSDL 666
            + T ++++   C   ++  AA+ F ++     + + VS A + N+ ++S +    F+  
Sbjct: 356 -VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 667 SQRIAEGI 674
           SQ +  GI
Sbjct: 415 SQMVVRGI 422



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 44/285 (15%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG------------ 237
           T N ++   C  G  E A ++ +EM + G+  +A +Y +++   C+ G            
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLV 731

Query: 238 ----RVTEADRWL--------------------SAMLDRGAILDNATLTLLITAFCDKGF 273
               R  +AD+ L                      M+ RG   D  T   LI  +C    
Sbjct: 732 KAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYC---- 787

Query: 274 RGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--- 329
            GS +++A +   +M   G  PN+ T+  L+ GL   G  E+      KLV   N +   
Sbjct: 788 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 847

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  TY  ++SGY +     +  +L   M  +G +P   TY  LI  + K G    A +L
Sbjct: 848 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 907

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           ++ +  +G  PN + Y+ +  G        E    LK++++ E++
Sbjct: 908 LNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVK 952


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 226/487 (46%), Gaps = 44/487 (9%)

Query: 142 SLISNGNFERAHEVMQCMVS----SFAEIGR--LKEGFSMVIEMTNNGLPLITSTL-NRV 194
           +L   G  E A  V + M      SF  + R   + G S+      +G+P +   + N V
Sbjct: 154 ALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTV 213

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----- 249
           V   C+ GLVE AE + + M  +G+  +  ++   + A C+ GRV +A R    M     
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQ 273

Query: 250 --LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             L R    D  T  ++++ FCD GF   + +A  L++ M   G+   V ++   + GL 
Sbjct: 274 HGLPRP---DQVTFDVMLSGFCDAGF---VDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G   +A  L L+ +  +   PN +TY  ++SG CKE K   A  +   ++   + P+ 
Sbjct: 328 RNGRVGEAHEL-LREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDV 386

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYTSL++ +C  GN   A  ++D M ++GC PN + YN ++  L + GR  EA  LL++
Sbjct: 387 VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLER 446

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN------------------ 469
             ++    D     I++    + ++   A+G+   M + G                    
Sbjct: 447 MSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSI 506

Query: 470 -----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
                PD   Y+ LI+A C++ +  E++K   E I   + P    Y + I GY + G  S
Sbjct: 507 SQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+K  + M + GC P   TY  LI G  ++ K DE  +    M  KG+SP  +T  +L 
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626

Query: 585 YEYCKQG 591
             +C+QG
Sbjct: 627 KSFCQQG 633



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 205/457 (44%), Gaps = 40/457 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+ G +E A+ VF+ M  R    +  S+ ++   YCR GR  +A + L  M
Sbjct: 147 TRNLLLRALCDAGRMELAQRVFEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGM 202

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                ++ N     ++  FC +G    +++A  L+E M  +G  PNV T    I  LCK 
Sbjct: 203 PSMNLVVCNT----VVAGFCKEGL---VEEAERLVERMRVQGLAPNVVTFNSRISALCKA 255

Query: 310 GWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           G    A+R+F  +     +   +P+  T+  M+SG+C    ++ A +L++ M+  G L  
Sbjct: 256 GRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRR 315

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             +Y   + G  + G    A++L+  M  E   PN Y YN I+ GLCK+G+  +A  +  
Sbjct: 316 VESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVEN 375

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 +  D +TYT LL  +  +     A  +   M + G  P+   Y  L+ +  R  
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG--------- 537
           +  E+E+  +     G          +I G  R+  +  A+     M + G         
Sbjct: 436 RTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGN 495

Query: 538 --------------CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                         C PD ITY  LIS LCK+ + DEA +    MI K ISP  V   T 
Sbjct: 496 SFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
            + YCK G ++ A+ +L  ++KK      RT N LIR
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 78/430 (18%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK------------- 329
           L ++++  G +P+V+T  +L+  LC  G  E A R+F  +   + +              
Sbjct: 132 LYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGR 191

Query: 330 -----------P--NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                      P  N+     +++G+CKE  +  AE L+ERM+ QGL PN  T+ S I  
Sbjct: 192 SVDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISA 251

Query: 377 HCKVGNFERAYD---------------------------------------LMDLMGKEG 397
            CK G    AY                                        L+D+M   G
Sbjct: 252 LCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
               + +YN  + GL + GRV EA+ELL++     +  +  TY I++S   K+ +   A 
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDAR 371

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   +    ++PD+  YT+L+ A+C +  +  + +   E    G  P   TY  ++   
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G  + A +  +RM++ G + D      +I GLC+ SKLD A    + M  +G     
Sbjct: 432 WRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEG----- 486

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK-LWIR-TVNTLIRKLCSEKRVGMAALFFHKL 635
                 +    + G+S  +++   S+ ++ L  R T + LI  LC E R   A     ++
Sbjct: 487 ------STALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEM 540

Query: 636 LGKDQNVDRV 645
           + KD + D V
Sbjct: 541 IVKDISPDSV 550



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 9/181 (4%)

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A+ +   P    Y  +I   LR+  +      ++ +   G  PD  T   L+  LC   +
Sbjct: 101 ALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGR 160

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           ++ A + +E+M  +     E +   LA  YC+ G S  A+ +L+ +   + +   NT++ 
Sbjct: 161 MELAQRVFEAMPVRN----EFSFGILARGYCRAGRSVDALKVLDGM-PSMNLVVCNTVVA 215

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLSQRIAEG 673
             C E  V  A     ++  +    + V+    ++AL  A    + Y +F D+ +    G
Sbjct: 216 GFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHG 275

Query: 674 I 674
           +
Sbjct: 276 L 276


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 221/436 (50%), Gaps = 7/436 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +VFDEM   GV  +  +Y  M+  + + G +    R    ML  G   +  T  +L++
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C  G    + +   L++EM      P+ +T+++L DGL + G ++    LF + ++  
Sbjct: 273 GLCRTG---RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKK- 328

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
                 +T + +++G CK+ K+ +A+ + E +   GL+P T  Y +LI G+C+V +   A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + + + M      P+   YNA+I+GLCK   V +A +L+ +  +  +     T+  L+  
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +    + ++   +   M + G+  D+ ++ +++ AFC+  K+ E+     + I   + P 
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
            + Y S+I  Y+  G+   A+   ++M   G +   +TY  L+ GLC+ S++DEA +   
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
           ++  +G+ P  V+  T+    C +GD+  A+ +L+ ++K   +  +RT +TL+  L S  
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628

Query: 624 RVGMAALFFHKLLGKD 639
           RV      + ++L K+
Sbjct: 629 RVHDMECLYQQMLHKN 644



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 212/450 (47%), Gaps = 5/450 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G L+ GF +  +M ++G      T N ++   C  G ++    + DEM +  
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y ++     R G         +  L +G +L   T ++L+   C  G     K
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q FE+L   V  G  P    +  LI+G C+      AF +F ++ +S + +P+  TY A+
Sbjct: 355 QVFEML---VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNAL 410

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK E + +AE L+  M++ G+ P+  T+ +LI  +   G  E+ + ++  M ++G 
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++ ++ +++   CK G++ EA  +L     +++  +   Y  ++  +++  +T+QAL 
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M  +G++  I  Y  L+   CR  ++ E+E+        GL P   +Y ++I    
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G+   A++  Q MN+ G  P   T   L+S L    ++ +    Y+ M+ K + P   
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 579 TRVTLAYEYCK-QGDSATAMIILESLDKKL 607
               +   Y + + DS  A +  E  +K +
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 4/383 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G    A ++ +EMV  G  PN  T+  +IDG  K G  E  FRL  +++  D  KPNV T
Sbjct: 208 GKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLH-DGPKPNVVT 266

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++SG C+  +M+    L++ M    +LP+  TY+ L  G  + G  +    L     
Sbjct: 267 YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESL 326

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+G     Y  + +++GLCK G+V +A ++ +      L    + Y  L++ + +  + +
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +M    + PD   Y  LI   C+ + + ++E    E   +G+ P+ ET+ ++I
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y   G +         M Q G   D I++G+++   CK  K+ EA    + MI K ++
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P      ++   Y + GD+  A++++E +        I T N L++ LC   ++  A   
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 632 FHKLLGKDQNVDRVSLAALKNAC 654
            + L  +    D VS   + +AC
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISAC 589



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 181/385 (47%), Gaps = 7/385 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           ++  LL+ +    G    ++ AF LL   V  G +P+ +    ++      G  + A  +
Sbjct: 123 SSCNLLLESLLFVGRHADVRAAFGLL---VAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 319 FLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
             ++ RS+   P +  +Y  +I+G  +  K + A  + + M + G+ PN  TY ++I GH
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K G+ E  + L D M  +G  PN+  YN ++ GLC+ GR+ E   L+ +     +  D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY+IL     +  E++  L LF   +K G+    +  + L+   C+  K+ ++++ F+ 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL PT   Y ++I GY +  ++  A   F++M      PD+ITY ALI+GLCK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
           + +A      M   G+ P   T  TL   Y   G       +L  + +K     + +  +
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKD 639
           +++  C   ++  A      ++ KD
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKD 504



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++ + ++  L+  F +  +M +  +     T N ++   C+L +V  AE++  EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV     ++  ++ AY   G++ +    LS M  +G   D  +   ++ AFC     
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN--- 487

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I +A  +L++M+ K   PN   +  +ID   + G TE+A  L  K+ ++     ++ T
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM-KNSGVSASIVT 546

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++ G C+  +++ AE L+  ++ QGL P+  +Y ++I   C  G+ ++A +L+  M 
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K G  P +   + ++  L   GRV +   L ++   + ++     Y I++  +++     
Sbjct: 607 KYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 666

Query: 455 QALGLFCRMVKAGL 468
           +   L   M + G+
Sbjct: 667 KVASLKKEMSEKGI 680



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++   ++  + +   +V+EM  +G+     T N ++      G +E    V  
Sbjct: 404 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+ +D  S+  +V A+C+ G++ EA   L  M+ +    +      +I A+ +  
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES- 522

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G  +QA  L+E+M   G   ++ T+ +L+ GLC+    ++A  L   L R+   +P+V
Sbjct: 523 --GDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDV 579

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y  +IS  C +   ++A  LL+ M + G+ P   T  +L+      G       L   
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639

Query: 393 MGKEGCTPNIYAYNAIID 410
           M  +   P+   Y  ++D
Sbjct: 640 MLHKNVEPSSSIYGIMVD 657


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 245/514 (47%), Gaps = 12/514 (2%)

Query: 150 ERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
           ++A  V+Q M       G+L+E   ++ +M+  GL     T + ++   C++G    A  
Sbjct: 191 DKAEAVLQQMFDK----GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARN 246

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FD M  RG   DA +Y+ ++  Y   G + +    L+ M+  G  L++    +LI A+ 
Sbjct: 247 IFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYA 306

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                 ++ +A     EM +KG+ PNV T+T +ID LCK G  E A   F ++V S+   
Sbjct: 307 KNE---TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV-SEGLS 362

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++ T+T++I G C   +  + E L   M  +G+ PN     +++   CK G    A+D 
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDF 422

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            D +   G  P++ +Y  +IDG C  G++ E+ +LL +     L+ D +TY+ LL+ + K
Sbjct: 423 FDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                 AL L+  M    + P+   Y  ++       ++  + +F+ + + +G+     T
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +  +  A++ FQ +       +  T+  +I GL K  ++ +A   + +++
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVG 626
             G+ P  +    +   + ++G    +  +  S++K       RT+N ++RKL  +  V 
Sbjct: 603 PSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            A  +  K+  K+ +V+  S A L  +     KY
Sbjct: 663 RAGTYLTKIDEKEYSVE-ASTAVLLISIVSERKY 695



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 218/467 (46%), Gaps = 30/467 (6%)

Query: 179 MTNNGL--PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           M ++G   P    + N V+    + G V+ A  +F EM  +G   +  +Y  ++   C+ 
Sbjct: 128 MADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKA 187

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
             + +A+  L  M D+G                       +++A  LL++M   G +P+V
Sbjct: 188 QAMDKAEAVLQQMFDKG----------------------QLEEAVRLLKKMSGGGLQPDV 225

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T+++LID  CK G   +A  +F  +VR     P+ +TY  ++ GY  +  +     LL 
Sbjct: 226 VTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ-NPDAYTYRTLLHGYATKGALVDMHDLLA 284

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M + G+    + +  LI  + K    ++A      M ++G +PN+  Y  +ID LCK G
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           RV++A     +     L  D IT+T L+       E K+   L   M+  G++P+     
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           T++ + C++ ++ E+  FF + I  G+ P   +YT +I GY  DG +  ++K   RM  I
Sbjct: 405 TIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PDN+TY AL++G CK  ++D+A   Y  M  K + P  +T   + +     G    A
Sbjct: 465 GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAA 524

Query: 597 ----MIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
               M I++S   +L I T N ++  LC    V  A   F  L  K+
Sbjct: 525 REFYMKIVDS-GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKE 570



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 42/334 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++     IG  K+   +  EM N G+      LN ++   C+ G V  A + FD++   G
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  SY +++  YC  G++ E+ + L  M+  G   DN T + L+  +C  G    + 
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNG---RVD 487

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L  EM  K  KPN  T+ +++ GL   G    A   ++K+V S   +  ++TY  +
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS-GIQLGINTYNIV 546

Query: 339 ISGYCKEEKMNRAEMLLERMKEQ-----------------------------------GL 363
           + G C+   ++ A  + + ++ +                                   GL
Sbjct: 547 LGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGL 606

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P+   Y  +I  H + G  E + +L   M K GCT N    NAI+  L +KG V+ A  
Sbjct: 607 VPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGT 666

Query: 424 LLKKAFQRELQADKITYTILL---SEHLKQAETK 454
            L K  ++E   +  T  +L+   SE   Q E K
Sbjct: 667 YLTKIDEKEYSVEASTAVLLISIVSERKYQKEVK 700


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 7/351 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-KPNVH 333
           G   ++   LE +V KG+KP+V   T LI G       +KA R+   L   + Y  P+V+
Sbjct: 76  GKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEIL---ETYGDPDVY 132

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +Y AMISG+ K  +++ A  + +RM+ +G  P+  TY  +I   C  G  E A+++MD +
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            K+GC P++  Y  +I+    +GR+ EA EL  +   R L+ D  TY  ++    K+   
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +AL     +   G NPD+ +Y  L+ +F  + + ++ E+  ++ + +G  P   T++ +
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R+G +  AV   + M + G  PD+ +Y  LIS  CK+ +LD A ++ E M+  G 
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCS 621
            P  V   T+    CK G +  A+ + E LD+      +R  NT+   L S
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 199/400 (49%), Gaps = 4/400 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A +VFD M +RG   D  +Y +M+ + C  G++  A   +  +L  G      T T+
Sbjct: 147 IDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTI 206

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A       G I +A EL +E+V +G +P++YT+  +I G+CK+G  ++A   F++ +
Sbjct: 207 LIEATI---LEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALD-FVRHL 262

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +    P+V +Y  ++  +  + +    E L++ M   G  PN  T++ LI   C+ G  
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A +++++M ++G TP+ Y+Y+ +I   CK+GR+  A E L+K        D + Y  +
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           L+   K      AL +F ++ + G  P + AY T+ +A        ++ +   E I  G+
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P + TY S+I    RDG +  A+     M      P  I++  ++ G+CK  ++ E  +
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIE 502

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
              +M+ KG  P E + V L       G  A AM +  SL
Sbjct: 503 LLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 186/352 (52%), Gaps = 4/352 (1%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I  A ++ + M  +G+ P+V T+ ++I  LC +G  E AF +  +L++ D  KP+V TYT
Sbjct: 147 IDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLK-DGCKPSVITYT 205

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I     E ++N A  L + +  +GL P+  TY ++I G CK G  +RA D +  +   
Sbjct: 206 ILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSAR 265

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P++ +YN ++     K R ++   L+K       + + +T++IL+S   ++   ++A
Sbjct: 266 GCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREA 325

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + +   M + GL PD ++Y  LI+AFC++ ++  + ++ ++ ++ G  P    Y +++  
Sbjct: 326 VNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILAT 385

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             + G    A+  F++++++GC P    Y  + S L       +A +    MI KGI P 
Sbjct: 386 LCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPD 445

Query: 577 EVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRV 625
           E+T  +L    C+ G  D A  +++ +E+   +  + + N ++  +C   RV
Sbjct: 446 EITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRV 497



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 185/379 (48%), Gaps = 4/379 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ S    G+L+  F ++ E+  +G      T   ++      G +  A E+FDE+ +RG
Sbjct: 172 MIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG 231

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++   C+ G    A  ++  +  RG   D  +  +L+ +F +K      +
Sbjct: 232 LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKS---RWE 288

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               L+++MV  G +PNV TH++LI   C++G   +A  + L++++     P+ ++Y  +
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNV-LEVMKEKGLTPDSYSYDPL 347

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS +CKE +++ A   LE+M   G LP+   Y +++   CK G  + A D+ + + + GC
Sbjct: 348 ISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGC 407

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P + AYN +   L   G   +A E++ +  ++ +  D+ITY  L+S   +     +A+G
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M      P + ++  ++   C+  ++ E  +     +  G  P + +Y  +I G  
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527

Query: 519 RDGNISSAVKYFQRMNQIG 537
             G  + A++    + ++G
Sbjct: 528 YAGWRAEAMELANSLYRLG 546



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 4/207 (1%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           LL+   +  +  ++L     +V  G  PD+   T LI  F   + +K++ +  +   T G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   +Y +MI G+ +   I SA + F RM   G +PD +TY  +I  LC + KL+ A 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKL 619
           +  + ++  G  P  +T   L      +G    A+ + + L  +     + T N +IR +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVS 646
           C E     A  F   L  +  N D VS
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVS 273


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 201/420 (47%), Gaps = 22/420 (5%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C+LG ++ A + F EM  +    D  +Y  ++   C+  RV EA   L  M
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G + +  T  +LI A    G    + +A +L++ M  KG  PN  T+  LI GLC K
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNG---DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 292

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +KA  L  K+V S    PN  TY  +I+G  K+ +      +L  M+E+G   N   
Sbjct: 293 GKLDKALSLLEKMV-SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI G  K G  E A  L   M ++GC PN+  Y A IDGLC+  +  EA ++L++  
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    +  TY+ L+    K+ ++++A+ ++  M+   +  ++   + L+   C   +++
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN--QIGCAPDNITYGA 547
           E+   +   +  GL P    Y+SMI G    G++   +K F  M   +    PD +TY  
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L + LC+Q  L  A     SM+ +G  P                DS T  I LE+L +++
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEGCDP----------------DSLTCNIFLETLRERI 575



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 11/394 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  L+I A C     G I +A +   EM  K   P+V+T++ L++GLCK+   ++A  L 
Sbjct: 176 TYNLIIKALCK---LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL- 231

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++++   PN  T+  +I    K   ++RA  L++ M  +G +PN  TY +LI+G C 
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L++ M    C PN   Y  II+GL K+ R ++   +L    +R  +A++  
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ +++ A+ L+  M + G  P++  Y   I   CR +K  E+E   QE +
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
           + G  P   TY+S++ G+ + G+   A+  ++ M       + +    L++GLC+  +L 
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD-----KKLWIRTVNT 614
           EA   +  M+G+G+ P  V   ++    C  G     + +   +       +  + T N 
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
           L   LC +  +  A    + +L  D+  D  SL 
Sbjct: 532 LFNALCRQDNLTRAIDLLNSML--DEGCDPDSLT 563



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 207/439 (47%), Gaps = 16/439 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADR---WLSAMLDR----GAILDNATLTLLITAFCDKGFRGSI 277
           SYKL    + R+       R   ++  +LDR    G +L   T+ +LI   C K      
Sbjct: 60  SYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVL-TETIFILIFKACGKAHLPG- 117

Query: 278 KQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL--VRSDNYKPNVHT 334
            +A      M      K  V +   +++ + ++G    AF+ +L +    S  ++PN+ T
Sbjct: 118 -EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLT 176

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I   CK  +++RA      M  +   P+  TY++L+ G CK    + A  L+D M 
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            EGC PN   +N +ID L K G +  A +L+   F +    +++TY  L+     + +  
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L  +MV +   P+   Y T+I    +Q++ ++           G    +  Y+S+I
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  ++G   +AV+ ++ M + GC P+ + YGA I GLC+  K DEA    + M+ KG  
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 575 PCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
           P   T  +L   + K+GDS  A+++   + S D +  +   + L+  LC   R+  A   
Sbjct: 417 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 476

Query: 632 FHKLLGKDQNVDRVSLAAL 650
           +  +LG+    D V+ +++
Sbjct: 477 WTHMLGEGLKPDVVAYSSM 495



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 196/470 (41%), Gaps = 72/470 (15%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   ++ EM   G      T N ++    + G +  A ++ D M  +G   +  +Y 
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 283

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++   C  G++ +A   L  M+    + +  T   +I     +      +    +L  M
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ---RRAEDGVHILMSM 340

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G K N Y ++ LI GL K+G +E A RL+ K +     KPNV  Y A I G C++EK
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLW-KEMAEKGCKPNVVVYGAFIDGLCRDEK 399

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + AE +L+ M  +G LPN  TY+SL+ G  K G+ ++A  +   M  +    N+   + 
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +++GLC+ GR++E                                   AL ++  M+  G
Sbjct: 460 LLNGLCESGRLRE-----------------------------------ALTVWTHMLGEG 484

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQE--AITAGLFPTKETYTSMICGYLRDGNISS 525
           L PD+ AY+++I   C    + +  K F E         P   TY  +     R  N++ 
Sbjct: 485 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 544

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV---T 582
           A+     M   GC PD++T                 C  +   + + I+P +  R+    
Sbjct: 545 AIDLLNSMLDEGCDPDSLT-----------------CNIFLETLRERINPPQDGRLFLDE 587

Query: 583 LAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEKRV 625
           L     K+    +A+ I+E +       +   W R    +I++ C  KR+
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSR----VIQRTCKPKRI 633



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 17/211 (8%)

Query: 455 QALGLFCRMVKAGLNPDIH------AYTTLIAAFCRQKKMKESEKFFQEAITA---GLFP 505
           +A+  F RM       D+H      ++ +++    ++     + KF+     A   G  P
Sbjct: 118 EAVNFFHRMAN-----DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP 172

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TY  +I    + G I  AV  F+ M    C PD  TY  L++GLCK+ ++DEA    
Sbjct: 173 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 232

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSE 622
           + M  +G  P  VT   L     K GD + A  +++++  K  +    T NTLI  LC +
Sbjct: 233 DEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 292

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++  A     K++      ++V+   + N 
Sbjct: 293 GKLDKALSLLEKMVSSKCVPNQVTYGTIING 323



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)

Query: 153 HEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEE 209
           H V+ C  +++   E GRL+E  ++   M   GL P + +  + + G+ C++G V+   +
Sbjct: 452 HNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL-CDVGSVDKGLK 510

Query: 210 VFDEM-CARGVC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           +F EM C       D  +Y ++  A CR   +T A   L++MLD G   D+ T  + +  
Sbjct: 511 LFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 570

Query: 268 -------------FCDKGFRGSIKQ-----AFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
                        F D+     +K+     A  ++EEM+ +   P   T + +I   CK
Sbjct: 571 LRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 629


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A ++
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCS---RGRVQAALDI 541

Query: 284 LEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  PN YT+  +I G CK G  ++A ++F +++     KP    Y A+I GY
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 601

Query: 343 CKEEKMNRAEMLLERMKE-----------------------------------QGLLPNT 367
           C + K++ A +  +RM E                                   +GL P+ 
Sbjct: 602 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 661

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI GHCK GN ++A ++ + M + G    +  Y A+I  L KKG+VQE  +L  +
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A +R ++ D + Y  L++ H       +A  +   M K  + PD   Y TL+   C   +
Sbjct: 722 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 781

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E    G+ P   TY ++I GY   G++  A++    M   G  P  +TY A
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+  GI+P + T ++L
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +++   C  G      +A ELL +M R    PN  T+  +I G C +G  + A  + 
Sbjct: 490 TFNIMLRHLCSAG---KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 542

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHC 378
            ++       PN +TY  +ISG+CK  +++ A  + + M  +G + P    Y +LI G+C
Sbjct: 543 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 602

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  + A    D M + G    +  YN ++  L   GR  EAYEL+++   + L  D  
Sbjct: 603 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL++ H K+   K+AL +F  M + G+   +  YT LI A  ++ +++E++K F EA
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P    Y ++I  +   GNI  A +    M +   APD++TY  L+ GLC   ++
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +  + M  +GI P  VT  TL   Y  +GD   A+ I   +  K +   + T N L
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842

Query: 616 IRKLC 620
           I+ LC
Sbjct: 843 IQGLC 847



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 210/462 (45%), Gaps = 60/462 (12%)

Query: 117 LSFFYWAIGFAKFRHFMRLYI-VCATS-------LISNGNFERAHEVMQCM--------- 159
           LS    A  FA F    RL + +C T+       L S G   RA E+++ M         
Sbjct: 464 LSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYN 523

Query: 160 --VSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++ F   GR++    ++ EM    G+     T   V+   C++G V+ A +VFDEM  
Sbjct: 524 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 583

Query: 217 RG-VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           +G V  +A  Y  ++  YC  G++  A  +   M++RG  +  AT  LL+ A    G RG
Sbjct: 584 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG-RG 642

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +  +A+EL+EEM  KG  P+V+T                                    Y
Sbjct: 643 T--EAYELVEEMGGKGLAPDVFT------------------------------------Y 664

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I+G+CKE  + +A  + E M  +G+     TYT+LIY   K G  +    L D   +
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YNA+I+     G +  A+E++ +  ++ +  D +TY  L+          +
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L   M + G+ PD+  Y TLI+ +  +  +K++ +   E +  G  PT  TY ++I 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           G  ++G    A    + M + G  PD+ TY +LI GL  + +
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           FRL L L  +        T+  M+   C   K  RA  LL +M      PN  TY ++I 
Sbjct: 480 FRLRLPLCTT--------TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 376 GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-EL 433
           G C  G  + A D+M ++  + G  PN Y Y  +I G CK GRV EA ++  +   + E+
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + + Y  L+  +  Q +   AL    RMV+ G+   +  Y  L+ A     +  E+ +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL P   TY  +I G+ ++GN+  A++ F+ M++ G     +TY ALI  L 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++ E  + ++  + +GI P  V    L   +   G+   A  I+  ++KK       
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           T NTL+R LC   RV  A     ++  +    D V+   L
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 807


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 210/441 (47%), Gaps = 7/441 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ SF + GR+ +  +++ +M       + +  T N V+      G +E A ++ D M  
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-R 293

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
               A A +Y  ++        V +A   L  M + G +    T   LI      G   +
Sbjct: 294 LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +  F+   EM  KG  P++ T+  LI+G CK G  ++A  LF  L R+    P V TY 
Sbjct: 354 AQVKFD---EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA-GLGPTVLTYN 409

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I GYC+   +  A  L E M E+  LP+  TYT L+ G C V N        D M  +
Sbjct: 410 ILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSK 469

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ +AYN  I      G +  A++L ++   R + +D +TY +L+    K    K A
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDA 529

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L+ +MV  GL  D   YT LI A C + ++ E++  F   + +GL P+  TYT  I  
Sbjct: 530 YVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHT 589

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y R GN+  A  +F++M + G  P+ +TY  L+  LC+  + + A Q +  M+ +G+ P 
Sbjct: 590 YCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPN 649

Query: 577 EVTRVTLAYEYCKQGDSATAM 597
           + T   L    CK+G+   A+
Sbjct: 650 KYTYTLLIDGSCKEGNWVHAI 670



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 204/448 (45%), Gaps = 25/448 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           Y V    L   G  E+A +++  M        RL +  S     T N  PLIT  L R  
Sbjct: 269 YNVVINGLARKGELEKAAQLVDIM--------RLSKKAS---AFTYN--PLITGLLAR-- 313

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
                   VE A  +  EM   G+     +Y  ++    + G    A      M  +G +
Sbjct: 314 ------DFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLL 367

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            D  T   LI  +C  G   ++KQA  L  ++ R G  P V T+ +LIDG C+ G  E A
Sbjct: 368 PDLITYNSLINGYCKAG---NLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGA 424

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            RL  ++   D   P+V TYT +++G C    +    +  + M  +GL P+   Y + I 
Sbjct: 425 RRLKEEMTEEDCL-PDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRIS 483

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
               +G    A+ L + M   G + +   YN +IDGLCK G +++AY L  K     L+ 
Sbjct: 484 AELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRL 543

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D +TYT L+  H ++    +A  +F  MV +GL+P +  YT  I  +CR+  +  +  +F
Sbjct: 544 DCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWF 603

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++ +  G+ P + TY  ++    R G   SA ++F  M + G  P+  TY  LI G CK+
Sbjct: 604 RKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKE 663

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTL 583
                A + Y  M  KGI P   T   L
Sbjct: 664 GNWVHAIRLYCEMHQKGIHPDHCTHNAL 691



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 181/406 (44%), Gaps = 38/406 (9%)

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYCK 344
           +M++ G +P+++T+  L+D  CK G  ++A  L   +  R+    PN  TY  +I+G  +
Sbjct: 219 DMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLAR 278

Query: 345 EEKMNRAEMLLE----------------------------------RMKEQGLLPNTNTY 370
           + ++ +A  L++                                   M+ +G++P   TY
Sbjct: 279 KGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI G  K GN E A    D M  +G  P++  YN++I+G CK G +++A  L     +
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L    +TY IL+  + +  + + A  L   M +    PD+  YT L+   C  + +  
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
              FF E ++ GL P    Y + I   L  G I++A +  + M   G + D +TY  LI 
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           GLCK   L +A   +  M+  G+    VT   L + +C++G    A  I + +       
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 611 TVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +V T    I   C    + +A  +F K+L +    + V+   L +A
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHA 624



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 8/141 (5%)

Query: 495 FQEAITAGLFP-TKETYTSMICGYLRDGNISSAVK-YFQRMNQIGCAPDNITYGALISGL 552
           FQE    G+ P  KE   + +   LRD      ++  +  M Q+G  P   TY  L+   
Sbjct: 182 FQEMARHGVAPFVKEC--NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSF 239

Query: 553 CKQSKLDEACQFYESMIGK--GISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW 608
           CK  ++D+A    + M  +  G  P +VT   +     ++G  + A  ++ +  L KK  
Sbjct: 240 CKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKAS 299

Query: 609 IRTVNTLIRKLCSEKRVGMAA 629
             T N LI  L +   V  A 
Sbjct: 300 AFTYNPLITGLLARDFVEKAG 320


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 220/436 (50%), Gaps = 7/436 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A +VFDEM   GV  +  +Y  M+  + + G +    R    ML  G   +  T  +L++
Sbjct: 35  ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 94

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C  G    + +   L++EM      P+ +T+++L DGL + G +     LF + ++  
Sbjct: 95  GLCRAG---RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK- 150

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
                 +T + +++G CK+ K+ +AE +LE +   GL+P T  Y +LI G+C+V +   A
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 210

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           + + + M      P+   YNA+I+GLCK   V +A +L+ +  +  +     T+  L+  
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 270

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +    + ++   +   M + G+  D+ ++ +++ AFC+  K+ E+     + I   + P 
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 330

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
            + Y S+I  Y+  G+   A    ++M   G +   +TY  L+ GLC+ S++DEA +   
Sbjct: 331 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 390

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
           ++  +G+ P  V+  T+    C +GD+  A+ +L+ ++K   +  +RT +TL+  L S  
Sbjct: 391 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450

Query: 624 RVGMAALFFHKLLGKD 639
           RV      + ++L K+
Sbjct: 451 RVHDMECLYQQMLHKN 466



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 214/450 (47%), Gaps = 5/450 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G L+ GF +  +M ++G      T N ++   C  G ++    + DEM +  
Sbjct: 57  MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 116

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y ++     R G         +  L +G +L   T ++L+   C  G    + 
Sbjct: 117 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG---KVA 173

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++LE +V  G  P    +  LI+G C+      AF +F ++ +S + +P+  TY A+
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNAL 232

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G CK E + +AE L+  M++ G+ P+  T+ +LI  +   G  E+ + ++  M ++G 
Sbjct: 233 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             ++ ++ +++   CK G++ EA  +L     +++  +   Y  ++  +++  +T+QA  
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M  +G++  I  Y  L+   CR  ++ E+E+        GL P   +Y ++I    
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G+   A++  Q MN+ G  P   TY  L+S L    ++ +    Y+ M+ K + P   
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 472

Query: 579 TRVTLAYEYCK-QGDSATAMIILESLDKKL 607
               +   Y + + DS  A +  E  +K +
Sbjct: 473 IYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 4/383 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G    A ++ +EMV  G  PN  T+  +IDG  K G  E  FRL  +++  D  KPN+ T
Sbjct: 30  GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH-DGPKPNIVT 88

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++SG C+  +M+   +L++ M    + P+  TY+ L  G  + G       L     
Sbjct: 89  YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 148

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+G     Y  + +++GLCK G+V +A ++L+      L    + Y  L++ + +  + +
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F +M    + PD   Y  LI   C+ + + ++E    E   +G+ P+ ET+ ++I
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y   G +         M Q G   D I++G+++   CK  K+ EA    + MI K ++
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P      ++   Y + GD+  A +++E +        I T N L++ LC   ++  A   
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388

Query: 632 FHKLLGKDQNVDRVSLAALKNAC 654
            + L  +    D VS   + +AC
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISAC 411



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 3/313 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+  +Y  +I+G  +  K + A  + + M + G++PN  TY ++I GH K G+ E  + L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            D M  +G  PNI  YN ++ GLC+ GR+ E   L+ +     +  D  TY+IL     +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             E++  L LF   +K G+    +  + L+   C+  K+ ++E+  +  +  GL PT   
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y ++I GY +  ++  A   F++M      PD+ITY ALI+GLCK   + +A      M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
             G+ P   T  TL   Y   G       +L  + +K     + +  ++++  C   ++ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 627 MAALFFHKLLGKD 639
            A      ++ KD
Sbjct: 314 EAVAILDDMIYKD 326



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 180/384 (46%), Gaps = 4/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +       G  +   S+  E    G+ L   T + ++   C+ G V  AE+V + +   G
Sbjct: 127 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 186

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +      Y  ++  YC++  +  A      M  R    D+ T   LI   C       + 
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM---VT 243

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L+ EM + G  P+V T   LID     G  EK F + L  ++    K +V ++ ++
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV-LSDMQQKGIKSDVISFGSV 302

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  +CK  K+  A  +L+ M  + + PN   Y S+I  + + G+ E+A+ L++ M   G 
Sbjct: 303 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 362

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + +I  YN ++ GLC+  ++ EA EL+     + L+ D ++Y  ++S    + +T +AL 
Sbjct: 363 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 422

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M K G+ P +  Y TL++A     ++ + E  +Q+ +   + P+   Y  M+  Y+
Sbjct: 423 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 482

Query: 519 RDGNISSAVKYFQRMNQIGCAPDN 542
           R  N S      + M++ G A D+
Sbjct: 483 RCENDSKVASLKKEMSEKGIAFDD 506



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 154/317 (48%), Gaps = 4/317 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++ + ++  L+  F +  +M +  +     T N ++   C+L +V  AE++  EM
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV     ++  ++ AY   G++ +    LS M  +G   D  +   ++ AFC     
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN--- 309

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I +A  +L++M+ K   PN   +  +ID   + G TE+AF L  K+ ++     ++ T
Sbjct: 310 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVT 368

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++ G C+  +++ AE L+  ++ QGL P+  +Y ++I   C  G+ ++A +L+  M 
Sbjct: 369 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K G  P +  Y+ ++  L   GRV +   L ++   + ++     Y I++  +++     
Sbjct: 429 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 488

Query: 455 QALGLFCRMVKAGLNPD 471
           +   L   M + G+  D
Sbjct: 489 KVASLKKEMSEKGIAFD 505



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 4/262 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +++   ++  + +   +V+EM  +G+     T N ++      G +E    V  
Sbjct: 226 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 285

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  +G+ +D  S+  +V A+C+ G++ EA   L  M+ +    +      +I A+ +  
Sbjct: 286 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES- 344

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G  +QAF L+E+M   G   ++ T+ +L+ GLC+    ++A  L   L R+   +P+V
Sbjct: 345 --GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDV 401

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y  +IS  C +   ++A  LL+ M + G+ P   TY +L+      G       L   
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 393 MGKEGCTPNIYAYNAIIDGLCK 414
           M  +   P+   Y  ++D   +
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVR 483


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 232/488 (47%), Gaps = 10/488 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  +   G+ KE   +  +M  +G+     T N ++   C+ G    A +VFD M  
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G   D+S Y  ++  Y   G + +  + L  M+  G   D+    +LI A+   G    
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM--- 361

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A     +M ++G  PN+ T+  ++D LC+ G  + A   F +L+ S+   PN   + 
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI-SEGLTPNGVVFR 420

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G C  +K ++AE L   M  +G+ PNT  + +L+   CK G   RA ++ DLM + 
Sbjct: 421 TLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRV 480

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
               ++  Y  +IDG C  G+V EA +LL+      ++ +++TY  +++ + K    + A
Sbjct: 481 DVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDA 540

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF +M   G+NP I  Y+T++    + +++  +++ +   I  G+     TY  ++ G
Sbjct: 541 CSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQG 600

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             ++     A++ F  +  I     N T+  +I  L K  + DEA   + S++ +G+ P 
Sbjct: 601 LCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 660

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFH 633
            VT   +     +QG       +  SL+K       R +N L+ KL  +  V  A ++  
Sbjct: 661 VVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLS 720

Query: 634 KLLGKDQN 641
           K+   D+N
Sbjct: 721 KI---DEN 725



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 215/468 (45%), Gaps = 7/468 (1%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           +M+ + T  G P    +   V+      G ++ A  +FDEM  +G+  +  +Y  ++  Y
Sbjct: 192 TMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGY 251

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C  G+  EA      M   G   D  T   L+   C  G     ++ F+    MV+KG K
Sbjct: 252 CSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFD---SMVKKGHK 308

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+   +  L+ G   +G+  +  +L   +VR +  +P+ + +  +I  Y K   ++ A +
Sbjct: 309 PDSSIYGTLLHGYATEGYLVQMHQLLDVMVR-NGTQPDHYIFNILIGAYAKHGMVDEAML 367

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
              +M++QGL PN  TY +++   C+VG  + A    D +  EG TPN   +  +I GLC
Sbjct: 368 AFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLC 427

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
              +  +A EL  +   R +  + I +  LL+   K+    +A  +F  MV+  +  D+ 
Sbjct: 428 ACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVI 487

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YTTLI  +C   K+ E+ K  +  +  G+ P + TY ++I GY ++G I  A   F++M
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQM 547

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  P  + Y  ++ GL +  ++  A + Y  MI  GI     T   +    C+   +
Sbjct: 548 ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCT 607

Query: 594 ATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
             A+ +  +L   D  L  RT N +I  L    R   A   F  LL +
Sbjct: 608 DDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLAR 655



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 199/423 (47%), Gaps = 11/423 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR----GAILDNATLTLLITAF 268
            M A G   +A SY +++   C   R  +A   L  M+      G   D  + T +I   
Sbjct: 157 RMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGL 216

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
             +G    + +A+ L +EM+ +G  PN  T+  L+ G C  G  ++A  +F K+ R D  
Sbjct: 217 LREG---QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR-DGV 272

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +P+V TY  ++   CK  +   A  + + M ++G  P+++ Y +L++G+   G   + + 
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+D+M + G  P+ Y +N +I    K G V EA     K  Q+ L  + +TY  ++    
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +  +   A+  F R++  GL P+   + TLI   C   K  ++E+   E I  G+ P   
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            + +++    ++G ++ A   F  M ++    D ITY  LI G C   K+DEA +  E M
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRV 625
           +  G+ P EVT  T+   YCK G    A  +   +  K     I   +T++  L   +R+
Sbjct: 513 VLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRI 572

Query: 626 GMA 628
             A
Sbjct: 573 AAA 575



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 196/415 (47%), Gaps = 10/415 (2%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQ 279
           AD  +Y +++    R G +  A   L  ++  G      T + L+   C DK    ++  
Sbjct: 94  ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDI 153

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---KPNVHTYT 336
           A   L  M   G  PN +++ +L+ GLC +  +++A  L   ++  D      P+V +YT
Sbjct: 154 A---LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYT 210

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G  +E ++++A  L + M +QG+ PN  TY  L++G+C  G  + A  +   M ++
Sbjct: 211 TVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRD 270

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN ++  LCK GR  EA ++     ++  + D   Y  LL  +  +    Q 
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQM 330

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L   MV+ G  PD + +  LI A+ +   + E+   F +    GL P   TY +++  
Sbjct: 331 HQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDA 390

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R G +  A+  F R+   G  P+ + +  LI GLC   K D+A +    MIG+GI P 
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450

Query: 577 EVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMA 628
            +   TL    CK+G    A  I +    +D +  + T  TLI   C + +V  A
Sbjct: 451 TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 211/453 (46%), Gaps = 18/453 (3%)

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
           +A  +FDE+  R    D +S   +  A   + R  E+     ++ +R    D  T +++I
Sbjct: 50  HAHHLFDELLRR----DTTSIFDLNSALSAVAR--ESPAVALSLFNRMPRADLCTYSIVI 103

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C +   G +  AF  L  ++R GW     T + L+ GLC    T  A  + L+ + +
Sbjct: 104 -GCCSRA--GHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA 160

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ----GLLPNTNTYTSLIYGHCKVG 381
               PN  +Y  ++ G C E +  +A  LL  M       G  P+  +YT++I G  + G
Sbjct: 161 LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREG 220

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             ++AY L D M  +G +PN   YN ++ G C  G+ +EA  + +K  +  ++ D +TY 
Sbjct: 221 QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYN 280

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+    K   + +A  +F  MVK G  PD   Y TL+  +  +  + +  +     +  
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN 340

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P    +  +I  Y + G +  A+  F +M Q G  P+ +TYG ++  LC+  K+D+A
Sbjct: 341 GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDA 400

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLWIRTV--NTLIR 617
              ++ +I +G++P  V   TL +  C   + D A  + + E + + +   T+  NTL+ 
Sbjct: 401 MSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV-EMIGRGICPNTIFFNTLLN 459

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            LC E  V  A   F  ++  D   D ++   L
Sbjct: 460 HLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 127/308 (41%), Gaps = 39/308 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V + ++       +  +   + +EM   G+   T   N ++   C+ G+V  A+ +FD M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               V  D  +Y  ++  YC  G+V EA + L  M+  G   +  T   +I  +C     
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKN--- 534

Query: 275 GSIKQAFELLEEMVRKGWKPNVY-----------------------------------TH 299
           G I+ A  L  +M  KG  P +                                    T+
Sbjct: 535 GRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTY 594

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            +++ GLC+   T+ A R+F  L   D +  N  T+  MI    K  + + A+ L   + 
Sbjct: 595 NIILQGLCQNNCTDDALRMFHNLCLIDFHLQN-RTFNIMIDALLKGGRHDEAKDLFASLL 653

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +GL+PN  TY  ++    + G  E   DL   + K GCT +    NA++  L +KG V+
Sbjct: 654 ARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVR 713

Query: 420 EAYELLKK 427
           +A   L K
Sbjct: 714 KAGVYLSK 721


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 210/426 (49%), Gaps = 7/426 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM   G+  +  +  +M+  +CR  ++  A   +   L  G   +  T + LI  FC   
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFC--- 150

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A  L++ MV   ++PNV T   LI+GLC KG   +A  L  ++V+    + N 
Sbjct: 151 LEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKY-GCEANE 209

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +++  CK      A  L  +M+E+ +  +   Y+ +I   CK GN + A  L + 
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G   ++ AY++II GLC  GR  +  ++L++   R +  + +T++ L+   +K+ +
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  L+  MV  G+ PD   Y++LI  FC++ ++ E+ +     ++ G  P   TY+ 
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I  Y +   + + ++ F  ++  G   D +TY  L+ G C+  KL+ A + ++ M+ +G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAA 629
           + P  VT   L    C  G+   A+ I E + K    L I   N +I  +C+  +V  A 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 630 LFFHKL 635
             F  L
Sbjct: 510 SLFCSL 515



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 183/357 (51%), Gaps = 4/357 (1%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM   G + N+YT  ++I+  C+K     AF +  + ++   ++PN  T++ +I+G+C 
Sbjct: 93  KEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKF-GFEPNTITFSTLINGFCL 151

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E +++ A  L++RM E    PN  T  +LI G C  G    A  L+D M K GC  N   
Sbjct: 152 EGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEIT 211

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +++ +CK G    A +L +K  +R ++A  + Y+I++    K      AL LF  M 
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+  D+ AY+++I   C   +  +  K  +E I   + P   T++++I  ++++G + 
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A + +  M   G APD ITY +LI G CK+++L EA Q  + M+ KG  P  VT   L 
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391

Query: 585 YEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGK 638
             YCK       M +  E   K L   TV  NTL++  C   ++ +A   F +++ +
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 214/451 (47%), Gaps = 5/451 (1%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           NG  E     M  M++ F    +L   FS+V      G    T T + ++   C  G V 
Sbjct: 98  NG-IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVS 156

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
            A  + D M       +  +   ++   C  GRVTEA   +  M+  G   +  T   ++
Sbjct: 157 EAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVL 216

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              C     G+   A +L  +M  +  K +V  ++++ID LCK G  + A  LF ++   
Sbjct: 217 NRMCKS---GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM-EM 272

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              K +V  Y+++I G C + + +    +L  M  + ++PN  T+++LI    K G    
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L + M   G  P+   Y+++IDG CK+ R+ EA ++L     +  + + +TY+IL++
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            + K       + LFC +   GL  D   Y TL+  FC+  K+  +++ FQE ++ G+ P
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +  TY  ++ G   +G +  A++ F++M +         Y  +I G+C  SK+D+A   +
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            S+  KG+ P  +T   +    CK+G  + A
Sbjct: 513 CSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 231/490 (47%), Gaps = 32/490 (6%)

Query: 163 FAEIGRLKEGFSMVI----EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           F+ + R KE + +V+    EM  NG+     T+N ++   C    + +A  V       G
Sbjct: 76  FSAVARRKE-YDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFG 134

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  +C  GRV+EA   +  M++     +  T+  LI   C    +G + 
Sbjct: 135 FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLC---LKGRVT 191

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  L++ MV+ G + N  T+  +++ +CK G T  A  LF K+    + K +V  Y+ +
Sbjct: 192 EALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM-EERSIKASVVQYSIV 250

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   CK+  ++ A  L   M+ +G+  +   Y+S+I G C  G ++    ++  M     
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  ++A+ID   K+G++ EA EL  +   R +  D ITY+ L+    K+    +A  
Sbjct: 311 IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQ 370

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   MV  G  P+I  Y+ LI ++C+ K++    + F E  + GL     TY +++ G+ 
Sbjct: 371 MLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFC 430

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM------IGKG 572
           + G ++ A + FQ M   G  P  +TYG L+ GLC   +L +A + +E M      +G G
Sbjct: 431 QSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIG 490

Query: 573 I------SPCEVTRVTLAYE-YCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           I        C  ++V  A+  +C           L     K  + T N +I  LC +  +
Sbjct: 491 IYNIIIHGMCNASKVDDAWSLFCS----------LSVKGVKPDVLTYNVMIGGLCKKGSL 540

Query: 626 GMAALFFHKL 635
             A + F K+
Sbjct: 541 SEADMLFRKM 550



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 186/367 (50%), Gaps = 5/367 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           V+   C+ G ++ A  +F+EM  +G+ AD  +Y  ++   C  GR  +  + L  M+ R 
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            I +  T + LI  F  +G    + +A EL  EMV +G  P+  T++ LIDG CK+    
Sbjct: 310 IIPNVVTFSALIDVFVKEG---KLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++ L L+ S   +PN+ TY+ +I+ YCK ++++    L   +  +GL+ +T TY +L
Sbjct: 367 EANQM-LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G C+ G    A +L   M   G  P++  Y  ++DGLC  G +Q+A E+ +K  +  +
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
                 Y I++      ++   A  LFC +   G+ PD+  Y  +I   C++  + E++ 
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F++    G  P+  TY  +I  +L    + S+V+  + M   G A D  T   ++  L 
Sbjct: 546 LFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML- 604

Query: 554 KQSKLDE 560
              +LD+
Sbjct: 605 SDGRLDK 611



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 4/408 (0%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ E   ++  M   G      T   V+   C+ G    A ++F +M  R + A    Y
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ + C+ G + +A    + M  +G   D    + +I   C+ G         ++L E
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDG---RWDDGAKMLRE 304

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+ +   PNV T + LID   K+G   +A  L+ ++V +    P+  TY+++I G+CKE 
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV-ARGIAPDTITYSSLIDGFCKEN 363

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  A  +L+ M  +G  PN  TY+ LI  +CK    +    L   +  +G   +   YN
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G C+ G++  A EL ++   R +    +TY ILL       E ++AL +F +M K+
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            +   I  Y  +I   C   K+ ++   F      G+ P   TY  MI G  + G++S A
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              F++M + GCAP + TY  LI      S +  + +  E M  +G +
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFA 591



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 5/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  + G L +  S+  EM   G+       + ++G  C  G  +   ++  EM  R 
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  + + G++ EA    + M+ RG   D  T + LI  FC +   G   
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG--- 366

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L+ MV KG +PN+ T+++LI+  CK    +   RLF + + S     +  TY  +
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE-ISSKGLVADTVTYNTL 425

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+C+  K+N A+ L + M  +G+ P+  TY  L+ G C  G  ++A ++ + M K   
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              I  YN II G+C   +V +A+ L      + ++ D +TY +++    K+    +A  
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +M + G  P    Y  LI A      +  S +  +E    G F    +   M+   L
Sbjct: 546 LFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG-FAADASTIKMVVVML 604

Query: 519 RDGNIS 524
            DG + 
Sbjct: 605 SDGRLD 610



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 139/317 (43%), Gaps = 5/317 (1%)

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+N A  L E M +   LP+   ++ L     +   ++        M   G   N+Y  N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I+  C+K ++  A+ ++ +A +   + + IT++ L++    +    +A+ L  RMV+ 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
              P++    TLI   C + ++ E+       +  G    + TY  ++    + GN + A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +  F++M +       + Y  +I  LCK   LD+A   +  M  KGI    V   ++   
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 587 YCKQG--DSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            C  G  D    M + E + + +   + T + LI     E ++  A   +++++ +    
Sbjct: 289 LCNDGRWDDGAKM-LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 643 DRVSLAALKNACYESNK 659
           D ++ ++L +   + N+
Sbjct: 348 DTITYSSLIDGFCKENR 364



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 3/202 (1%)

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           K++Y   L   +   +  +A+ LF  M+++   P +  ++ L +A  R+K+      F +
Sbjct: 34  KVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCK 93

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    G+     T   MI  + R   +  A     R  + G  P+ IT+  LI+G C + 
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
           ++ EA    + M+     P  VT  TL    C +G    A+++++ + K   +    T  
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 614 TLIRKLCSEKRVGMAALFFHKL 635
            ++ ++C      +A   F K+
Sbjct: 214 PVLNRMCKSGNTALALDLFRKM 235



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 11/193 (5%)

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+ E+   F+  I +   P+   ++ +     R       + + + M+  G   +  T  
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 547 ALISGLCKQSKLDEACQFYESMIGK----GISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            +I+  C++ KL     F  S++G+    G  P  +T  TL   +C +G  + A+ +++ 
Sbjct: 109 IMINCFCRKRKL----LFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDR 164

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           + +  +   + TVNTLI  LC + RV  A +   +++      + ++   + N   +S  
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224

Query: 660 YALFSDLSQRIAE 672
            AL  DL +++ E
Sbjct: 225 TALALDLFRKMEE 237


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 251/523 (47%), Gaps = 27/523 (5%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           A  FF WA    ++RH                    A E  Q M+S ++  G+L+    +
Sbjct: 113 AFEFFRWADRQWRYRH--------------------APEFAQLMLS-YSRAGKLRSAMRV 151

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           +  M  +G     S  N  V +    G V+ A E  + M   GV  D  +Y  ++   C 
Sbjct: 152 LHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCG 211

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKP 294
             RV +A   +  ML  G   D  +   +++  C +     +++   LL+ M    G  P
Sbjct: 212 ARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEK---RVEEVRGLLQRMRNDAGLFP 268

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +  T+ VLI GL K G  ++A   FL+      ++ +   Y+A++  +C   +M  A+ +
Sbjct: 269 DQVTYNVLIHGLAKHGHADEALE-FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEI 327

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +  M  +G  P+  TY++++ G C++G  ++A  +M  M K  C PN   + A+++GLCK
Sbjct: 328 VGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCK 387

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G+  EA+ELL K+ +       ITY++++    ++ + K++  +  +M++ G  P    
Sbjct: 388 VGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 447

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
              LI A C+  K  E++ F ++  + G       +T++I G+ R G++ SA+     M 
Sbjct: 448 INLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY 507

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                PD +TY  ++  L K+ +L EA    E M+ +G+ P  VT  T+ + YC++G+  
Sbjct: 508 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLE 567

Query: 595 TAMIILESLDKKLWIRTV-NTLIRKLCSEKRVGMAALFFHKLL 636
             + +LE +  +  +++  N ++ KLC+  ++  A    +K+L
Sbjct: 568 DLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 610



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 170/386 (44%), Gaps = 22/386 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
            ++  LA    +  AL F   + G  +FR     Y     S   NG    A E++  M+S
Sbjct: 275 VLIHGLAKHGHADEALEFLRESEG-KRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMIS 333

Query: 162 ---------------SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
                           F  IG L +   M+  M  N     T T   ++   C++G    
Sbjct: 334 KGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSE 393

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+ ++           +Y +++  + R G++ E+   +  ML +G       + LLI 
Sbjct: 394 AWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIH 453

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C  G      +A + +E+   KG   NV   T +I G  ++G  E A  L   +  S 
Sbjct: 454 ALCKDG---KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS- 509

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           N  P+V TYT ++    K+ ++  A  L+E+M  +GLLP   TY ++I+ +C+ GN E  
Sbjct: 510 NRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDL 569

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            +L++ M       +  AYN +++ LC  G++ EAY LL K  +     D  T  IL+  
Sbjct: 570 LNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMES 627

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDI 472
            L +    QA  + CRM +  L PD+
Sbjct: 628 FLNRGLGLQAYNVACRMFRRNLIPDV 653



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 4/240 (1%)

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G V+ A+E  + A ++        +  L+  + +  + + A+ +   M K G  PDI  
Sbjct: 107 RGDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISI 166

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
               +       ++ ++ +F +     G+ P   TY  +I G      +  A++    M 
Sbjct: 167 CNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVML 226

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GISPCEVTRVTLAYEYCKQGDS 593
           Q GC PD I+Y  ++S LCK+ +++E     + M    G+ P +VT   L +   K G +
Sbjct: 227 QNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHA 286

Query: 594 ATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             A+  L ES  K+  +  V  + ++   C   R+  A     +++ K    D V+ + +
Sbjct: 287 DEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTV 346


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 232/502 (46%), Gaps = 14/502 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+ +   G+L+    +   +    +P    T   VV   C  G +  A  V DEM  RG
Sbjct: 96  MVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                  Y +++ A CR G    A R L  +  RG  LD     L++ A CD+G   S+ 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG---SVD 209

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL ++   G +P+V ++  ++ GLC          L  ++VR     PN+ T+  +
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM-ACPPNIVTFNTL 268

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C+     R   +L +M E G  P+   Y ++I G CK G+ + A+++++ M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN ++ GLC   R +E  ELL + F ++   D +T+ IL+    +     + + 
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+  G  PD+  YTT+I  FC++  + E+    +     G  P   +YT ++ G  
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
                  A     +M Q GC  + IT+  LI+ LCK+  +++A +  + M+  G SP  +
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 579 TRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
           +  T+     K G +  A+ +L  + +K +   T+  +++   L  E R+      F  +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 636 LGKDQNVDRVSLAALKNACYES 657
               Q+    S A L NA   S
Sbjct: 569 ----QDTTIRSDAVLYNAVISS 586



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 200/406 (49%), Gaps = 30/406 (7%)

Query: 137 IVCATSLIS----NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTL 191
           IV   +LIS    NG FER HEV+                     +M  +G  P I    
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLA--------------------QMAEHGCTPDIRMYA 301

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
             + GI C+ G ++ A E+ + M + G+  +   Y  ++   C   R  E +  L+ M D
Sbjct: 302 TIIDGI-CKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +   LD+ T  +L+  FC  G    + +  ELLE+M+  G  P+V T+T +I+G CK+G 
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGL---VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            ++A  + LK + +   KPN  +YT ++ G C  E+   AE L+ +M +QG   N  T+ 
Sbjct: 418 IDEAV-MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI   CK G  E+A +L+  M   GC+P++ +Y+ +IDGL K G+  EA ELL     +
Sbjct: 477 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 536

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +  + I Y+ + S   ++    + + +F  +    +  D   Y  +I++ C++ + + +
Sbjct: 537 GMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            +F    +++G  P + TYT +I G   +G +  A +    +   G
Sbjct: 597 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 189/415 (45%), Gaps = 10/415 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM   +  +  L E      EM     P    T N ++   C  GL E   EV  +M   
Sbjct: 238 CMAKRWGCVQELME------EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH 291

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y  ++   C+ G +  A   L+ M   G   +      L+   C        
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE---RW 348

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++  ELL EM  K    +  T  +L+D  C+ G  ++   L  +++      P+V TYT 
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-VHGCMPDVITYTT 407

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CKE  ++ A MLL+ M   G  PNT +YT ++ G C    +  A DLM  M ++G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C  N   +N +I+ LCKKG V++A ELLK+        D I+Y+ ++    K  +T +AL
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   MV  G++P+   Y+++ +A  R+ ++ +  + F       +      Y ++I   
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G    A+++   M   GC P+  TY  LI GL  +  + EA +    +  KG
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 219/522 (41%), Gaps = 74/522 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +    GR+ +  +++ EM   G   I    + ++  AC  G    A  V +++ ARG
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +  L++ A C  G V +A   L  +   G   D  +   ++   C     G ++
Sbjct: 188 CALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 247

Query: 279 QAFELLEEMVRKGWKPNVYT-----------------HTVL------------------I 303
              EL+EEMVR    PN+ T                 H VL                  I
Sbjct: 248 ---ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK---------------- 347
           DG+CK+G  + A  + L  + S   KPNV  Y  ++ G C  E+                
Sbjct: 305 DGICKEGHLKVAHEI-LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 348 -------------------MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
                              ++R   LLE+M   G +P+  TYT++I G CK G  + A  
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+  M   GC PN  +Y  ++ GLC   R  +A +L+ +  Q+    + IT+  L++   
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K  E+ +     +  G+ P   
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+S+     R+G I+  ++ F  +       D + Y A+IS LCK+ + + A +F   M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           +  G  P E T   L      +G    A  +L  L  K  +R
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 645



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 215/472 (45%), Gaps = 47/472 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V   C  G +E A  +     A  V  +A +Y  +V A C  GR+ +A   L  M  
Sbjct: 94  NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 252 RGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           RG         +++ A C   GFR +++    +LE++  +G   +V    ++++ +C +G
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVR----VLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA  L L+ + S   +P+V +Y A++ G C  ++    + L+E M      PN  T+
Sbjct: 207 SVDKALHL-LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +LI   C+ G FER ++++  M + GCTP+I  Y  IIDG+CK+G ++ A+E+L     
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN---- 321

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
                                          RM   GL P++  Y TL+   C  ++ +E
Sbjct: 322 -------------------------------RMPSYGLKPNVVCYNTLLKGLCSAERWEE 350

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +E+   E           T+  ++  + ++G +   ++  ++M   GC PD ITY  +I+
Sbjct: 351 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVIN 410

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           G CK+  +DEA    +SM   G  P  ++   +    C       A  ++  + ++   L
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 470

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              T NTLI  LC +  V  A     ++L    + D +S + + +   ++ K
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 187/442 (42%), Gaps = 74/442 (16%)

Query: 229 MVVAYCRMGRVT-------------------------------EADRWLSAMLDRGAILD 257
           ++ + C  GR                                 E+ R L+A +    +  
Sbjct: 64  LIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PVPP 120

Query: 258 NA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP---------------------- 294
           NA T   ++ A C    RG I  A  +L+EM R+G  P                      
Sbjct: 121 NAYTYFPVVRALC---ARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 295 -------------NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
                        +V    ++++ +C +G  +KA  L L+ + S   +P+V +Y A++ G
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHL-LRDLPSFGCEPDVVSYNAVLKG 236

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C  ++    + L+E M      PN  T+ +LI   C+ G FER ++++  M + GCTP+
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           I  Y  IIDG+CK+G ++ A+E+L +     L+ + + Y  LL         ++   L  
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M       D   +  L+  FC+   +    +  ++ +  G  P   TYT++I G+ ++G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            I  AV   + M   GC P+ I+Y  ++ GLC   +  +A      MI +G     +T  
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 582 TLAYEYCKQGDSATAMIILESL 603
           TL    CK+G    A+ +L+ +
Sbjct: 477 TLINFLCKKGLVEQAIELLKQM 498



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 156/345 (45%), Gaps = 54/345 (15%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVI 177
           +R+Y      +   G+ + AHE++  M S                     R +E   ++ 
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM +   PL   T N +V   C+ GLV+   E+ ++M   G   D  +Y  ++  +C+ G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 238 RVTE-----------------------------ADRWLSA------MLDRGAILDNATLT 262
            + E                             A+RW+ A      M+ +G  L+  T  
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C KG    ++QA ELL++M+  G  P++ +++ +IDGL K G T++A  L L +
Sbjct: 477 TLINFLCKKGL---VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL-LNV 532

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +    PN   Y+++ S   +E ++N+   + + +++  +  +   Y ++I   CK G 
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            ERA + +  M   GC PN   Y  +I GL  +G V+EA E+L +
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 6/305 (1%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y AM++GYC+  ++  A  L   +    + PN  TY  ++   C  G    A  ++D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P    Y+ I++  C+ G  + A  +L+    R    D     ++L+    Q    
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   +   G  PD+ +Y  ++   C  K+    ++  +E +     P   T+ ++I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R+G      +   +M + GC PD   Y  +I G+CK+  L  A +    M   G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 575 PCEVTRVTLAYEYCK-QGDSATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALF 631
           P  V   TL    C  +    T  ++ E  DK   +   T N L+   C    V      
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 632 FHKLL 636
             ++L
Sbjct: 390 LEQML 394



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 10/237 (4%)

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YNA++ G C+ G+++ A  L   A    +  +  TY  ++     +     AL +   M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  P    Y  ++ A CR    + + +  ++    G          ++      G++ 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+   + +   GC PD ++Y A++ GLC   +     +  E M+     P  VT  TL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 585 YEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              C+ G       +L  + +      IR   T+I  +C E  + +A    H++L +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA----HEILNR 322


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 234/541 (43%), Gaps = 43/541 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   + S F E+G L+E       MT   +     + N  +    + G  + + + F +M
Sbjct: 184 VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDM 243

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +Y +M+   C+ G +  A      M   G   D  T   LI  +   G  
Sbjct: 244 VGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGY---GKL 300

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + ++F L EEM   G +P+V T+  LI+  CK     KAF  FL  +++   KPNV T
Sbjct: 301 GLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFH-FLHEMKNSGLKPNVVT 359

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I   CKE  + +A   L  M+  GL PN  TYTSLI  +CK G    A  L D M 
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           +     N+  Y  ++DGLCK+GR+ EA +L +   +  +  +  TYT L+  H+K    +
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE---------------------- 492
            AL L   + +  + PD+  Y T+I   C Q K++E E                      
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRM 539

Query: 493 -------------KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
                           QE    G+  T  T+  +I G  + G +  A+ YF RM      
Sbjct: 540 DAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQ 599

Query: 540 PDNITY-GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           P+N+    ALI GLCK + ++ A + ++ M  K + P ++    L     K  D   A+ 
Sbjct: 600 PNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN 659

Query: 599 I---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           I   +  L  +L +    +L+  L     V  A +F ++++GK    D +    L    Y
Sbjct: 660 IRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYY 719

Query: 656 E 656
           E
Sbjct: 720 E 720



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 232/485 (47%), Gaps = 40/485 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + G +    S+  +M   GL     T N ++    +LGL++ +  +F+EM   G
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++  +C+  ++ +A  +L  M + G   +  T + LI A C +     ++
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHM---LQ 374

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA + L +M R G  PN +T+T LID  CK G+   A +L  ++++      NV TYT +
Sbjct: 375 QAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQV-QVGFNVVTYTTL 433

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE +M  AE L   M + G+ PN  TYT+L++GH K    E A +L+  + ++  
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  II GLC + +++E   ++ +     ++A+ + YTI +  + K  +T +AL 
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 459 L-----------------------------------FCRMVKAGLNPD-IHAYTTLIAAF 482
           L                                   F RM    L P+ +   T LI   
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGL 613

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+   ++ ++K F E     + P K  YT++I G L+  +   A+    RM+++G   D 
Sbjct: 614 CKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDL 673

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
             Y +L+ GL + + + +A  F   MIGKGI P E+  + L  +Y + G    A+ + + 
Sbjct: 674 HAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDE 733

Query: 603 LDKKL 607
           L KK+
Sbjct: 734 LLKKV 738



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 3/299 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    + A+ S + +   +  A     RM    + P   +  + +Y   K G  + +   
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G   +++ YN +I  +CK+G +  A  L  +  Q  L  D +TY  L+  + K
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                ++  LF  M   G  PD+  Y  LI  FC+ ++M ++  F  E   +GL P   T
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+++I    ++  +  A+K+   M ++G +P+  TY +LI   CK   L +A +  + M+
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
              +    VT  TL    CK+G    A  +  ++ K      ++T   L+      KRV
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRV 478



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 3/276 (1%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           +P    + +L     ++G  E A      M +    P   + NA +  L K G+   + +
Sbjct: 179 VPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNK 238

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
             +      +     TY I++    K+ +   A  LF +M + GL PDI  Y +LI  + 
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYG 298

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +   + ES   F+E    G  P   TY ++I  + +   +  A  +   M   G  P+ +
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI  LCK+  L +A +F   M   G+SP E T  +L    CK G  + A+ + + +
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418

Query: 604 DK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            +      + T  TL+  LC E R+  A   F  ++
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMI 454


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 226/500 (45%), Gaps = 61/500 (12%)

Query: 129 FRHFMRLYI-VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEG----------FSMVI 177
           F+H + +++  C T  IS     +AH+    M+ S     RL  G          FS+  
Sbjct: 59  FQHGIPMFLHKCKTGSIS---VTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYK 115

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   GL     TLN ++   C +  +         +  RG   D  ++  ++   C   
Sbjct: 116 QMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEH 175

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK------G 291
           R+ EA +    M   G   +  T   LI   C     G+I  A +  +EM+         
Sbjct: 176 RIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCA---LGNINIALKWHQEMLNDTSPYVFN 232

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            +PNV +++++IDGLCK G  E+A  LF ++V     +PNV T++ +I   CKE ++ +A
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMV-DQGVQPNVVTFSVLIDMLCKEGQVIKA 291

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + LLE M + G++PN  TYTSLI G C VG+   A +L   M  +G  P++ +YN +I+G
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP- 470
            CK  +V+EA +L  +     +  D  T  +LL       +   A  LF R++K    P 
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPK 410

Query: 471 -----------------------------------DIHAYTTLIAAFCRQKKMKESEKFF 495
                                              DI  +  LI   C+  K++ + + F
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++    G+ P    Y+SMI G+ + G +  A   FQ+M + GC+PD ITY  L+ G  + 
Sbjct: 471 EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYES 530

Query: 556 SKLDEACQFYESMIGKGISP 575
           +KL++  Q    MI K + P
Sbjct: 531 NKLEKVVQLLHRMIEKDVWP 550



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 227/481 (47%), Gaps = 16/481 (3%)

Query: 201 LGLVEYAEEVFD---EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           L  +E+  +VF    +M   G+  D  +  +++   C + R+ E    ++ ++ RG I D
Sbjct: 101 LAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPD 160

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T T LI   C       I +A +L   M + G  PNV T+  LI GLC  G    A +
Sbjct: 161 VVTFTTLIKGLC---VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALK 217

Query: 318 LFLKLVRSD-----NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
              +++        N +PNV +Y+ +I G CK      A  L   M +QG+ PN  T++ 
Sbjct: 218 WHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSV 277

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   CK G   +A  L+++M + G  PN++ Y ++I G C  G +  A EL      + 
Sbjct: 278 LIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG 337

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D I+Y +L++ + K  + ++A+ LF  M+  G+ PD+     L+ A     K+ +++
Sbjct: 338 YEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAK 397

Query: 493 KFFQEAITAGLFPTKETYTSMIC-GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           + F+  I     P       +   G  ++G I  A+K F  +       D  T+G LI G
Sbjct: 398 ELFR-VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDG 456

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
           LCK  KL+ A + +E +  +GI P  +   ++ + +CK+G    A I+ + +++      
Sbjct: 457 LCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPD 516

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQ 668
           + T + L+R      ++       H+++ KD   D    A +++   +  KY  + DL Q
Sbjct: 517 LITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576

Query: 669 R 669
           R
Sbjct: 577 R 577



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/528 (23%), Positives = 234/528 (44%), Gaps = 53/528 (10%)

Query: 79  LRSSPPRLNLQIDIDSLTHE-QAITVVASLANEAGSMVALSFFYW---AIGFAKFRHFMR 134
           L +SP R++ Q  I    H+ +  ++  + A++   ++  S F +     G AK  H+ +
Sbjct: 50  LHASPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQ 109

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNR 193
           ++ +     ++          +  +++    + R+ EG + +  +   G +P + +    
Sbjct: 110 VFSLYKQMHLAG--LWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTL 167

Query: 194 VVGIACELGLVEYAEEVFDEM--------------CARGVCA------------------ 221
           + G+  E  ++E A ++F  M                +G+CA                  
Sbjct: 168 IKGLCVEHRIIE-ATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDT 226

Query: 222 ---------DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
                    +  SY +++   C++G   EA    + M+D+G   +  T ++LI   C +G
Sbjct: 227 SPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEG 286

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +A +LLE M++ G  PN++T+T LI G C  G    A  LF+ +  S  Y+P+V
Sbjct: 287 ---QVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM-PSKGYEPDV 342

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +Y  +I+GYCK  K+  A  L   M   G+ P+  T   L+      G  + A +L  +
Sbjct: 343 ISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRV 402

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           +       ++      +DGLCK G + EA +L  +     ++ D  T+  L+    K  +
Sbjct: 403 IKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGK 462

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + A  LF ++ + G+ PD  AY+++I  FC++ ++ ++   FQ+    G  P   TY+ 
Sbjct: 463 LETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSI 522

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           ++ G+     +   V+   RM +    PD+  Y  +   +CK  K  E
Sbjct: 523 LMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKE 570



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 161/339 (47%), Gaps = 39/339 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    ++G  +E   +  EM + G+     T + ++ + C+ G V  A+++ + M   G
Sbjct: 243 IIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIG 302

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++  +C +G +  A     +M  +G   D  +  +LI  +C K  +  ++
Sbjct: 303 IVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC-KTLK--VE 359

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLI----------------------------------- 303
           +A +L  EM+  G  P+V T  VL+                                   
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFL 419

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DGLCK G+  +A +LF +L  S N K ++ T+  +I G CK  K+  A  L E++ E+G+
Sbjct: 420 DGLCKNGYIFEAMKLFNEL-ESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y+S+I+G CK G  ++A  L   M + GC+P++  Y+ ++ G  +  ++++  +
Sbjct: 479 QPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQ 538

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           LL +  ++++  D   Y I+     K  + K+ L L  R
Sbjct: 539 LLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQR 577



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 4/274 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  +G L     + + M + G      + N ++   C+   VE A ++F+EM   G
Sbjct: 313 LIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVG 372

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +  +++ A    G+V +A      +       D     + +   C  G+   I 
Sbjct: 373 MWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGY---IF 429

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  E+     K ++ T   LIDGLCK G  E A+ LF KL   +  +P+   Y++M
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYE-EGIQPDAMAYSSM 488

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK+ ++++A +L ++M+E G  P+  TY+ L+ G  +    E+   L+  M ++  
Sbjct: 489 IHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDV 548

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
            P+   Y  + D +CK  + +E  +LL++ F ++
Sbjct: 549 WPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 5/385 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+ G  + A E+  +M +RG+  +  SY  +++ +CR   +  A    S +L+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQ-AFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           +G   +N T ++LI    D  FR   +Q A E++  M     + N   +  +I+GLCK G
Sbjct: 507 KGLKPNNYTYSILI----DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            T KA  L   ++       +  +Y ++I G+ KE +M+ A    E M   G+ PN  TY
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           TSL+ G CK    ++A ++ D M  +G   +I AY A+IDG CK+  ++ A  L  +  +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L   +  Y  L+S          AL L+ +M+K GL  D+  YTTLI    +   +  
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + + + E    GL P +  YT ++ G  + G     VK F+ M +    P+ + Y A+I+
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802

Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
           G  ++  LDEA + ++ M+ KGI P
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILP 827



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 45/491 (9%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           +NR +    +   +  A+E++  M A GV  D  + +L++ A  R  +  EA   LS  +
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKK 309
           +RGA  D+   +L + A C       +  A  LL EM  K    P+  T+T +I    K+
Sbjct: 261 ERGAEPDSLLYSLAVQACCKT---LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  + A RL  +++ SD    NV   T++I+G+CK   +  A +L ++M+++G  PN+ T
Sbjct: 318 GNMDDAIRLKDEML-SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           ++ LI    K G  E+A +    M   G TP+++  + II G  K  + +EA +L  ++F
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  L A+      +LS   KQ +T +A  L  +M   G+ P++ +Y  ++   CRQK M 
Sbjct: 437 ETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +   F   +  GL P   TY+ +I G  R+ +  +A++    M       + + Y  +I
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555

Query: 550 SGLC------------------------------------KQSKLDEACQFYESMIGKGI 573
           +GLC                                    K+ ++D A   YE M G GI
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAAL 630
           SP  +T  +L    CK      A+ + + +     KL I     LI   C    +  A+ 
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675

Query: 631 FFHKLLGKDQN 641
            F +LL +  N
Sbjct: 676 LFSELLEEGLN 686



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 209/486 (43%), Gaps = 74/486 (15%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   V+  + + G ++ A  + DEM + G+  +  +   ++  +C+   +  A      M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY-THTV------- 301
              G   ++ T ++LI  F      G +++A E  ++M   G  P+V+  HT+       
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKN---GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422

Query: 302 --------------------------LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
                                     ++  LCK+G T++A  L  K+  S    PNV +Y
Sbjct: 423 QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSY 481

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+C+++ M+ A ++   + E+GL PN  TY+ LI G  +  + + A ++++ M  
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-------------------AFQRELQAD 436
                N   Y  II+GLCK G+  +A ELL                      F +E + D
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601

Query: 437 K-----------------ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
                             ITYT L++   K     QAL +   M   G+  DI AY  LI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             FC++  M+ +   F E +  GL P++  Y S+I G+   GN+ +A+  +++M + G  
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D  TY  LI GL K   L  A + Y  M   G+ P E+    +     K+G     + +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781

Query: 600 LESLDK 605
            E + K
Sbjct: 782 FEEMKK 787



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 138/614 (22%), Positives = 246/614 (40%), Gaps = 73/614 (11%)

Query: 23  TLFVIRSLCYQTHHHNFLANS---KQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHL 79
           +L V R +  +    N   N     Q  F   S +PS  Q L+    +        +  L
Sbjct: 3   SLLVFRKIPSRIRLRNLRNNKPFCSQSQFPKESENPSQEQRLLVYGSTSEENPVTSKVSL 62

Query: 80  RSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVC 139
            S+ P             + A  +   L        AL F+ WA  +             
Sbjct: 63  LSAKPE----------QKDDASVIDVLLNRRNNPEAALRFYNWARPW------------- 99

Query: 140 ATSLISNGNFERAHE---VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
                  G+FE       ++  +VSS    GR  +     +  T+N  P+ +  ++++V 
Sbjct: 100 ------RGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVS-TSNPTPMASVLVSKLVD 152

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI- 255
            A   G          E+ +R       ++  ++ AY +  +   A   ++ ML+   I 
Sbjct: 153 SAKSFGF---------EVNSR-------AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIP 196

Query: 256 ---LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
                N TL+ L+        R S+ +A EL   MV  G   +  T  +L+    ++   
Sbjct: 197 FFPYVNRTLSALVQ-------RNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKP 249

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYT 371
            +A  +  + +     +P+   Y+  +   CK   +  A  LL  MKE+ L +P+  TYT
Sbjct: 250 AEALEVLSRAIER-GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           S+I    K GN + A  L D M  +G + N+ A  ++I G CK   +  A  L  K  + 
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               + +T+++L+    K  E ++AL  + +M   GL P +    T+I  + + +K +E+
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428

Query: 492 EKFFQEAITAGLFPTK--ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            K F E+   GL       T  S +C   + G    A +   +M   G  P+ ++Y  ++
Sbjct: 429 LKLFDESFETGLANVFVCNTILSWLC---KQGKTDEATELLSKMESRGIGPNVVSYNNVM 485

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW 608
            G C+Q  +D A   + +++ KG+ P   T   L     +  D   A+ ++  +    + 
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545

Query: 609 IRTV--NTLIRKLC 620
           +  V   T+I  LC
Sbjct: 546 VNGVVYQTIINGLC 559



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 150/317 (47%), Gaps = 5/317 (1%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELG 202
           +++ N E    V Q +++   ++G+  +   ++  M     L +   + N ++    + G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A   ++EMC  G+  +  +Y  ++   C+  R+ +A      M ++G  LD     
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI  FC    R +++ A  L  E++ +G  P+   +  LI G    G    A  L+ K+
Sbjct: 659 ALIDGFCK---RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           ++ D  + ++ TYT +I G  K+  +  A  L   M+  GL+P+   YT ++ G  K G 
Sbjct: 716 LK-DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F +   + + M K   TPN+  YNA+I G  ++G + EA+ L  +   + +  D  T+ I
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834

Query: 443 LLSEHLKQAETKQALGL 459
           L+S  +   +  +A  L
Sbjct: 835 LVSGQVGNLQPVRAASL 851


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 216/450 (48%), Gaps = 39/450 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F+++G     FS+  ++   G      T N ++   C  G +  A    D++ A+G
Sbjct: 111 LINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQG 170

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWL-------------------------------- 246
              D  SY  ++   C++GR+T A + L                                
Sbjct: 171 FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAF 230

Query: 247 ---SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
              S M+ +    D+ T   LI  FC     G +K+A  LL +M+ +   P +YT ++L+
Sbjct: 231 DLYSQMVAKRISPDDFTCNSLIYGFC---IMGQLKEAVGLLHKMILENINPRMYTFSILV 287

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           D  CK+G  ++A ++ L +    +   +V TY +++ GYC  +++N+A+ + + M  +G+
Sbjct: 288 DAFCKEGKVKEA-KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGV 346

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           + N  +YT++I G CK+   + A +L + M      PN+  YN++IDGL K G++    +
Sbjct: 347 IANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLK 406

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L+ +   R    + ITY  +L    K     +A+ L   +   G+ PD++ YT LI   C
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC 466

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  K+++++K F++ +  G      TYT MI G+   G   +A+    +M   GC P+  
Sbjct: 467 QSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGI 573
           TY  +I  L ++ + D A +    MI +G+
Sbjct: 527 TYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 9/459 (1%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           E   L   F+ ++   N   P+I    N+++    +      A  +  +M   G+ +D  
Sbjct: 49  EENNLISSFNSLLHHKNPTPPIIQ--FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFF 106

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +++  + ++G  + +      +L +G   +  T   LI   C    +G I QA    
Sbjct: 107 TFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLC---LKGHIHQALNFH 163

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +++V +G+  +  ++  LI+GLCK G    A +L LK V     +PN   Y  +I   CK
Sbjct: 164 DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQL-LKRVDGKLVQPNAVMYNMIIDNMCK 222

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            + +N A  L  +M  + + P+  T  SLIYG C +G  + A  L+  M  E   P +Y 
Sbjct: 223 AKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYT 282

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           ++ ++D  CK+G+V+EA  +L    ++++  D +TY  L+  +    E  +A  +F  M 
Sbjct: 283 FSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMA 342

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+  ++ +YTT+I   C+ K + E+   F+E     + P   TY S+I G  + G IS
Sbjct: 343 SRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKIS 402

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
             +K    M+  G  P+ ITY +++  LCK   +D+A     ++  +GI P   T   L 
Sbjct: 403 CVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462

Query: 585 YEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLC 620
              C+ G    A  + E L  K   L + T   +I+  C
Sbjct: 463 KGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFC 501



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 175/363 (48%), Gaps = 5/363 (1%)

Query: 146 NGNFERAHEVMQCMV-SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           +G   + + VM  M+  +  +   + + F +  +M    +     T N ++   C +G +
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           + A  +  +M    +     ++ ++V A+C+ G+V EA   L   + +  ILD  T   L
Sbjct: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  +C       I +A ++ + M  +G   NV ++T +I+GLCK    ++A  LF ++ R
Sbjct: 322 MDGYC---LVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEM-R 377

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                PNV TY ++I G  K  K++    L++ M ++G  PN  TY S++   CK  + +
Sbjct: 378 CRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVD 437

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +A  L+  +  +G  P++Y Y  +I GLC+ G++++A ++ +    +    D  TYT+++
Sbjct: 438 KAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMI 497

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                +     AL L  +M   G  P+   Y  +I +   + +   +EK  +E I  GL 
Sbjct: 498 QGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557

Query: 505 PTK 507
             K
Sbjct: 558 DEK 560



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 38/320 (11%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  L+   N  P +  +  ++S   K +  + A  L ++M+  G++ +  T+  LI    
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           ++G    ++ +   + K+G  PN   +N +I GLC KG +                    
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIH------------------- 157

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                           QAL    ++V  G + D  +Y TLI   C+  ++  + +  +  
Sbjct: 158 ----------------QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 201

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P    Y  +I    +   ++ A   + +M     +PD+ T  +LI G C   +L
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTL 615
            EA      MI + I+P   T   L   +CK+G    A ++L    KK   L + T N+L
Sbjct: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321

Query: 616 IRKLCSEKRVGMAALFFHKL 635
           +   C  K +  A   F  +
Sbjct: 322 MDGYCLVKEINKAKDIFDSM 341


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/582 (24%), Positives = 267/582 (45%), Gaps = 35/582 (6%)

Query: 59  QSLVKTVCSMVLESYYQQFHLRSSPPRL---NLQIDIDSLTHEQAITVVASLANEAGSMV 115
            SLV+  C ++         L SS  R     L+  + SL   Q   V+ S  +E     
Sbjct: 180 HSLVRDTCKLI--------QLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERN--- 228

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS-------------- 161
           AL FFYWA    ++RH   +Y+V    L      + A  +++ M                
Sbjct: 229 ALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVM 288

Query: 162 -SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            S++  GRL++   ++  M   G+    S  N  + I      ++ A    + M   G+ 
Sbjct: 289 VSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIA 348

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +  +Y  ++  YC + +V +A   +  M  +G   D  +   ++   C       I+  
Sbjct: 349 PNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR-- 406

Query: 281 FELLEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            EL+++M       P+  T+  LI  L K G  ++A  + L+      +K +   Y+A++
Sbjct: 407 -ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEI-LQEAEKLRFKVDKVEYSAIV 464

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
             YCKE K+ +A+ L+  M  +G  P+  TYTS++ G C++G  ++A  +M  M K  C 
Sbjct: 465 HAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCK 524

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y   ++GLC+ G+  EA +++  + +     + ITY++++    ++ +  +A  +
Sbjct: 525 PNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDV 584

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M+  G  P+      L+ + CR  K +E+ +  +E +  G       +T++I G+ +
Sbjct: 585 VREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQ 644

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             ++ +A+     M      PD +TY ALI  L K  +++EA +    M+ +G+ P  VT
Sbjct: 645 KDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVT 704

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-NTLIRKLC 620
             ++ ++YC++G     + +L+ +  K   +T  N +I KLC
Sbjct: 705 YRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLC 746



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 38/439 (8%)

Query: 168 RLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           RL E   ++ +M T++ L     T N ++ +  + G  + A E+  E        D   Y
Sbjct: 401 RLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEY 460

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V AYC+ G++ +A   +S M  +G   D  T T ++  FC  G    + QA +++++
Sbjct: 461 SAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIG---KLDQAKKMMQQ 517

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +   KPN  T+T  ++GLC+ G + +A R  + +   + + PN  TY+ ++ G  +E 
Sbjct: 518 MYKHHCKPNAVTYTTFLNGLCRNGKSLEA-RKMMNMSEEEWWTPNAITYSVVVHGLRREG 576

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           K+N A  ++  M  +G  PN      L++  C+ G    A  L+     +GC  N+  + 
Sbjct: 577 KLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFT 636

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I G C+K  ++ A  LL   +      D +TYT L+    K    ++A  L  +M++ 
Sbjct: 637 TVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQ 696

Query: 467 GLNPD-------IH--------------------------AYTTLIAAFCRQKKMKESEK 493
           GL P        IH                          AY  +I   C+   ++E+  
Sbjct: 697 GLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANS 756

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              E +        +T   ++  YL  G   SA K   RM      PD      +   L 
Sbjct: 757 LLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLV 816

Query: 554 KQSKLDEACQFYESMIGKG 572
            + KL+EA +     + +G
Sbjct: 817 VEGKLEEADRLVLRFVERG 835



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 6/350 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  IG+L +   M+ +M  +       T    +   C  G    A ++ +      
Sbjct: 498 VLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEW 557

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +A +Y ++V    R G++ EA   +  M+ +G   +   + LL+ + C  G     +
Sbjct: 558 WTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDG---KPR 614

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +LL+E + KG   NV   T +I G C+K   E A  L   +    N  P+  TYTA+
Sbjct: 615 EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLC-NKHPDTVTYTAL 673

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I    K +++  A  L  +M  QGL+P+  TY S+I+ +C+ G  E    L+  M  +  
Sbjct: 674 IDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSR 733

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                AYN +I+ LCK G ++EA  LL +  +   + D  T  +L+  +L       A  
Sbjct: 734 FQT--AYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYK 791

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           + CRM    L PD+     +      + K++E+++     +  G    +E
Sbjct: 792 VACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVSAQE 841


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 9/437 (2%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E +      +++ F++ G+++E      +M  +G  +   + N ++   C+ GL + A
Sbjct: 305 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 364

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             V DEM   G+    S+Y + + A C  GR+ +A   LS+M    A  D  +   L+  
Sbjct: 365 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHG 420

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +   G      +A  L +++      P++ T+  LIDGLC+ G  E A RL  ++     
Sbjct: 421 YIKMG---KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 477

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P+V TYT ++ G+ K   ++ A  + + M  +G+ P+   YT+   G  ++G+ ++A+
Sbjct: 478 F-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 536

Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            L + ++  +   P++  YN  IDGLCK G + +A E  +K F+  L  D +TYT ++  
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +L+  + K A  L+  M++  L P +  Y  LI    +  +++++ ++  E    G+ P 
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +++ G  + GNI  A +Y  +M + G  P+  +Y  LIS  C   K +E  + Y+
Sbjct: 657 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 716

Query: 567 SMIGKGISPCEVTRVTL 583
            M+ K I P   T   L
Sbjct: 717 EMLDKEIEPDGYTHRAL 733



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 42/377 (11%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  + E M+  G  P V T   ++D   K G  E+  +++L++ R  N + +  TY 
Sbjct: 256 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTYN 314

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G+ K  KM  A      M+  G      ++  LI G+CK G F+ A+ + D M   
Sbjct: 315 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 374

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P    YN  I  LC  GR+ +A ELL          D ++Y  L+  ++K  +  +A
Sbjct: 375 GIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 430

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  +    ++P I  Y TLI   C    ++ +++  +E  T  +FP   TYT+++ G
Sbjct: 431 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 490

Query: 517 YLRDGNISSAVKYFQRMNQIGC------------------------------------AP 540
           ++++GN+S A + +  M + G                                     AP
Sbjct: 491 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 550

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D   Y   I GLCK   L +A +F   +   G+ P  VT  T+   Y + G    A  + 
Sbjct: 551 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 610

Query: 601 -ESLDKKLWIRTVNTLI 616
            E L K+L+   +   +
Sbjct: 611 DEMLRKRLYPSVITYFV 627



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 6/302 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++    E G L+    +  EMT   +     T   +V    + G +  A EV+DEM  
Sbjct: 450 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 509

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRG 275
           +G+  D  +Y    V   R+G   +A R    M+       + T+  + I   C  G   
Sbjct: 510 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG--- 566

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++ +A E   ++ R G  P+  T+T +I G  + G  + A  L+ +++R   Y P+V TY
Sbjct: 567 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY-PSVITY 625

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I G+ K  ++ +A      MK++G+ PN  T+ +L+YG CK GN + AY  +  M +
Sbjct: 626 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 685

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EG  PN Y+Y  +I   C   + +E  +L K+   +E++ D  T+  L  +HL++     
Sbjct: 686 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF-KHLEKDHESM 744

Query: 456 AL 457
           AL
Sbjct: 745 AL 746



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%)

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           Y K+    +  +  E+M  +G LP+      ++          +A  + + M + G  P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N ++D   K G ++   ++  +  +R ++  ++TY IL++   K  + ++A     
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M ++G     +++  LI  +C+Q    ++     E + AG++PT  TY   IC     G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            I  A +    M     APD ++Y  L+ G  K  K  EA   ++ +    I P  VT  
Sbjct: 395 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 450

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           TL    C+ G+   A  + E +  +L    + T  TL++       + MA   + ++L K
Sbjct: 451 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 21/325 (6%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL--------- 363
           E AFR F  + R  + K +   + AM+    + + M+ A ++ ER  + G+         
Sbjct: 137 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLID 196

Query: 364 -----LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                L        L++ + K    E+     + M ++G  P++   N ++  L     +
Sbjct: 197 GSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMM 256

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A  + +   +  +    IT+  +L    K  + ++   ++  M +  +      Y  L
Sbjct: 257 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  F +  KM+E+ +F  +   +G   T  ++  +I GY + G    A      M   G 
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P   TY   I  LC   ++D+A +   SM     +P  V+  TL + Y K G    A +
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASL 432

Query: 599 ILESL---DKKLWIRTVNTLIRKLC 620
           + + L   D    I T NTLI  LC
Sbjct: 433 LFDDLRAGDIHPSIVTYNTLIDGLC 457



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 13/228 (5%)

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K++  ++ L  F +M++ G  P +     ++      + M ++   ++  I  G+ PT
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +M+    + G++    K +  M +       +TY  LI+G  K  K++EA +F+ 
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW--IRTVNTLIRKLCSE 622
            M   G +    +   L   YCKQG  D A   +  E L+  ++    T N  I  LC  
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG-VTDEMLNAGIYPTTSTYNIYICALCDF 393

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDL 666
            R+  A     +LL      D VS   L +   +  K+     LF DL
Sbjct: 394 GRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 437


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 200/392 (51%), Gaps = 10/392 (2%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E     +  +V+ F    R+ +  S+V +M   G        N ++   C+   V  A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           + F E+  +G+  +  +Y  +V   C  GR  +A R L  M+ R    +  T + L+ AF
Sbjct: 211 DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAF 270

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    + +A E+ EEMVR    P++ T++ LI+GLC     ++A ++F  L+ S   
Sbjct: 271 VKNG---KVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGC 326

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+V +Y  +I+G+CK +++     L  +M ++GL+ NT TY +LI G  +VG+ ++A +
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M   G +P+I+ YN ++ GLC  G +++A  + +   + E+  D +TYT ++    
Sbjct: 387 FFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMC 446

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + + A GLFC +   GL PDI  YTT+++  C +    E E  + +    GL     
Sbjct: 447 KTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND- 505

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              SM+C  L DG+I+ + +  ++M   G AP
Sbjct: 506 ---SMLC--LGDGDITISAELIKKMLSCGYAP 532



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 4/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C    V  A  V  +M   G   D  +   +V  +CR  RV++A   +  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++ G   D      +I + C K  R  +  A +  +E+ RKG +PNV T+T L++GLC  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLC-KTRR--VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G    A RL   +++     PNV TY+A++  + K  K+  A+ + E M    + P+  T
Sbjct: 239 GRWNDAARLLRDMIKR-KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI G C     + A  + DLM  +GC P++ +YN +I+G CK  RV++  +L +K  
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           QR L  + +TY  L+    +  +  +A   F +M   G++PDI  Y  L+   C    ++
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE 417

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++   F++   + +     TYT++I G  + G +  A   F  ++  G  PD +TY  ++
Sbjct: 418 KALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMM 477

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
           SGLC +    E    Y  M  +G+
Sbjct: 478 SGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 180/348 (51%), Gaps = 4/348 (1%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G + ++YT  ++I+  C       A  +  K+++   Y+P+  T  ++++G+C+  +++ 
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  L+++M E G  P+   Y ++I   CK      A D    +G++G  PN+  Y A+++
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  GR  +A  LL+   +R++  + ITY+ LL   +K  +  +A  +F  MV+  ++P
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           DI  Y++LI   C   ++ E+ + F   ++ G FP   +Y ++I G+ +   +   +K F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++M+Q G   + +TY  LI G  +   +D+A +F+  M   G+SP   T   L    C  
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413

Query: 591 GDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           G    A++I E + K    L I T  T+I+ +C   +V  A   F  L
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 188/374 (50%), Gaps = 4/374 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  ++ +++  +C   +V+ A   L  ML  G   D  T+  L+  FC    R  +
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCR---RNRV 171

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  L+++MV  G++P++  +  +ID LCK      A   F ++ R    +PNV TYTA
Sbjct: 172 SDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK-GIRPNVVTYTA 230

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G C   + N A  LL  M ++ + PN  TY++L+    K G    A ++ + M +  
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  Y+++I+GLC   R+ EA ++      +    D ++Y  L++   K    +  +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF +M + GL  +   Y TLI  F +   + ++++FF +  + G+ P   TY  ++ G 
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             +G +  A+  F+ M +     D +TY  +I G+CK  K+++A   + S+  KG+ P  
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470

Query: 578 VTRVTLAYEYCKQG 591
           VT  T+    C +G
Sbjct: 471 VTYTTMMSGLCTKG 484



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  LF ++V++  + P++  +  ++S   K +K +    L ++M+  G+  +  T+  +I
Sbjct: 69  AINLFREMVKTRPF-PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              C       A  ++  M K G  P+     ++++G C++ RV +A  L+ K  +   +
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D + Y  ++    K      AL  F  + + G+ P++  YT L+   C   +  ++ + 
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            ++ I   + P   TY++++  ++++G +  A + F+ M ++   PD +TY +LI+GLC 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---T 611
             ++DEA Q ++ M+ KG  P  V+  TL   +CK       M +   + ++  +    T
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
            NTLI+       V  A  FF ++
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQM 391



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 38/245 (15%)

Query: 447 HLKQAETKQALGLFCRMVKA-----------------------------------GLNPD 471
            L+  +   A+ LF  MVK                                    G+  D
Sbjct: 60  RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ +  +I  FC   ++  +     + +  G  P + T  S++ G+ R   +S AV    
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M +IG  PD + Y A+I  LCK  ++++A  F++ +  KGI P  VT   L    C  G
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
               A  +L  + K+     + T + L+       +V  A   F +++    + D V+ +
Sbjct: 240 RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYS 299

Query: 649 ALKNA 653
           +L N 
Sbjct: 300 SLING 304


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 9/500 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +++  + G +     +  EM ++   + +S  NR +G+  +    E AE ++ +M   G 
Sbjct: 16  IANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGF 75

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
                +Y   +   C++ +    D  L  M   G I D     + +   C +   G   Q
Sbjct: 76  SLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQ 135

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F     MV++G +P+V ++T+LI+GL + G    A  ++  ++RS    P+     A++
Sbjct: 136 TFFC---MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALV 191

Query: 340 SGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            G C   K++ A EM+ E +K   +  +   Y +LI G CK G  E+A  L   M K GC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGC 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN +++       ++ A  ++ +  +  +Q D  +Y  LL  H + +   +   
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYS 311

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              + ++     D+ +Y+TLI  FCR    K++ K F+E    G+     T+TS+I  +L
Sbjct: 312 FMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFL 371

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+GN S A K   +M ++G +PD I Y  ++  LCK   +D+A   +  MI   I+P  +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAI 431

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           +  +L    C+ G    A+ + E +  K       T   +I  L  EK++  A   + ++
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQM 491

Query: 636 LGKDQNVDR-VSLAALKNAC 654
           + K   +DR VS   +K +C
Sbjct: 492 MDKGFTLDRDVSDTLIKASC 511



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 180/406 (44%), Gaps = 48/406 (11%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N  + + C    V +A + F  M  RG   D  SY +++    R G+VT+A    +AM+
Sbjct: 117 FNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNVYTHTVLIDGLCKK 309
             G   DN     L+   C       +  A+E++ E ++    K ++  +  LI G CK 
Sbjct: 177 RSGVSPDNKACAALVVGLCHAR---KVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKA 233

Query: 310 GWTEKA--FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           G  EKA   + F+  +  +   P++ TY  +++ Y     + RAE ++  M   G+  + 
Sbjct: 234 GRIEKAEALKSFMSKIGCE---PDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDA 290

Query: 368 NTYTSLIYGHCKVGNFERAYDLM--DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL- 424
            +Y  L+  HC+V + +R Y  M  ++  +  C  ++ +Y+ +I+  C+    ++AY+L 
Sbjct: 291 YSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC--DVVSYSTLIETFCRASNTKKAYKLF 348

Query: 425 -----------------LKKAFQRE-----------------LQADKITYTILLSEHLKQ 450
                            L KAF RE                 L  D+I YT +L    K 
Sbjct: 349 EEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A G+F  M++  + PD  +Y +LI+  CR  ++ E+ K F++       P + T+
Sbjct: 409 GNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             +I G +R+  +S+A K + +M   G   D      LI   C  S
Sbjct: 469 KFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 12/287 (4%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++S F + GR+++  ++   M+  G      T N ++    +  +++ AE V  EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEM 281

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD----RGAILDNATLTLLITAFCD 270
              G+  DA SY  ++  +C   RV+  DR  S ML     RG   D  + + LI  FC 
Sbjct: 282 VRSGIQLDAYSYNQLLKRHC---RVSHPDRCYSFMLKEMEPRG-FCDVVSYSTLIETFCR 337

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
                + K+A++L EEM +KG   NV T T LI    ++G +  A +L  ++       P
Sbjct: 338 A---SNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTEL-GLSP 393

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           +   YT ++   CK   +++A  +   M E  + P+  +Y SLI G C+ G    A  L 
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           + M  + C P+   +  II GL ++ ++  AY++  +   +    D+
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDR 500



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 30/272 (11%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           AY + I  L K G +  A ++  +      +     Y   +   +K++  + A  ++  M
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDM 70

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK---ETYTSMICGYLRD 520
           +  G +     Y+  I+  C+ KK +  +   ++  T G  P       Y  ++C   R+
Sbjct: 71  MPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLC---RE 127

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP----- 575
             +  AV+ F  M Q G  PD ++Y  LI+GL +  K+ +A + + +MI  G+SP     
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187

Query: 576 -------CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
                  C   +V LAYE   +         ++S   KL I   N LI   C   R+  A
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEE--------IKSARVKLSIVVYNALISGFCKAGRIEKA 239

Query: 629 ALF--FHKLLGKDQNVDRVSLAALKNACYESN 658
                F   +G +   D V+   L N  Y++N
Sbjct: 240 EALKSFMSKIGCEP--DLVTYNVLLNYYYDNN 269



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 39/358 (10%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y + I+   K   ++ A  + + M+       ++ Y   I    K   FE A  +   M 
Sbjct: 12  YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMM 71

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-----------AF-------------- 429
             G +   + Y+  I GLCK  + +    LL+            AF              
Sbjct: 72  PMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVG 131

Query: 430 ----------QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
                     QR  + D ++YTIL++   +  +   A+ ++  M+++G++PD  A   L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191

Query: 480 AAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
              C  +K+  + +   E I +A +  +   Y ++I G+ + G I  A      M++IGC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGC 251

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATA 596
            PD +TY  L++     + L  A      M+  GI     +   L   +C+    D   +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYS 311

Query: 597 MIILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++ E   +    + + +TLI   C       A   F ++  K    + V+  +L  A
Sbjct: 312 FMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKA 369



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 5/198 (2%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + L A ++ Y   ++  +K      A+ +F  M  +        Y   I    ++ + +
Sbjct: 2   HQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFE 61

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +E  +++ +  G      TY+  I G  +           + M  +G  PD   +   +
Sbjct: 62  LAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYL 121

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
             LC+++K+  A Q +  M+ +G  P  V+   L     + G    A+ I  ++     I
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM-----I 176

Query: 610 RTVNTLIRKLCSEKRVGM 627
           R+  +   K C+   VG+
Sbjct: 177 RSGVSPDNKACAALVVGL 194


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 187/383 (48%), Gaps = 4/383 (1%)

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G ++ A   F+ M  R        +  ++ +  RM +          M  RG   +  T
Sbjct: 18  FGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCT 77

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
           L++LI  FC   F   +   F +  + +++G+KP+V   T LIDG+C+ G TE A  L L
Sbjct: 78  LSILINCFC---FLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGL-L 133

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           K +      P+V T  +++ GYC + K+++   +   M  +GL P+  +Y+  I G+CKV
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              + A +L D M   G  PN   YN +I  LC+  R ++A  L +K     L  D + Y
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           + LL    KQ    + L LF  M +  + PD+  YT +I   CR +K+K++++     I 
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL P   TYT+++ G  R+G+I  A++ F++M + GC P + +Y  L+ G  + +    
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTST 373

Query: 561 ACQFYESMIGKGISPCEVTRVTL 583
             Q    M  +G     VTR  L
Sbjct: 374 VVQLIHEMADRGFYADAVTRTFL 396



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 178/360 (49%), Gaps = 6/360 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P+I    NR++     +   E    +F EM  RG+  +  +  +++  +C +  V     
Sbjct: 39  PIIE--FNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFS 96

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                L RG   D    T LI   C     G  + A  LL+EM   G  P+V T   L+ 
Sbjct: 97  VFGKTLKRGFKPDVVIFTTLIDGVCRI---GKTELAAGLLKEMGLVGCVPDVVTCNSLMR 153

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C +G  +K  ++F  L+ S   KP+V++Y+  I+GYCK EK++ A  L + M  +G++
Sbjct: 154 GYCSQGKIDKVRKIF-HLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVV 212

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY +LI   C+      A  L   M   G +P+I AY+ ++DG CK+G + E   L
Sbjct: 213 PNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVL 272

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            ++  +R ++ D + YTI+++   +  + K A  +  R++  GL PD+H YT L+   CR
Sbjct: 273 FQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCR 332

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  + E+ + F++    G  P   +Y  ++ G L+  + S+ V+    M   G   D +T
Sbjct: 333 EGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 164/331 (49%), Gaps = 2/331 (0%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L +EM  +G K NV T ++LI+  C     +  F +F K ++   +KP+V  +T +I G 
Sbjct: 62  LFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKR-GFKPDVVIFTTLIDGV 120

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+  K   A  LL+ M   G +P+  T  SL+ G+C  G  ++   +  LM  +G  P++
Sbjct: 121 CRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDV 180

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           Y+Y+  I+G CK  ++ EA EL  +   R +  + +TY  L+    +    + A  LF +
Sbjct: 181 YSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRK 240

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   GL+PDI AY+TL+  FC+Q  + E    FQE     + P    YT +I G  R   
Sbjct: 241 MCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRK 300

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A +   R+   G  PD  TY AL+ GLC++  + EA + +  M   G  P   +   
Sbjct: 301 VKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNV 360

Query: 583 LAYEYCKQGDSATAM-IILESLDKKLWIRTV 612
           L     +  D++T + +I E  D+  +   V
Sbjct: 361 LLQGCLQHNDTSTVVQLIHEMADRGFYADAV 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 12/373 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS   + + +   S+  EM   G+     TL+ ++   C L  V+Y   VF +   RG
Sbjct: 46  LLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRG 105

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D   +  ++   CR+G+   A   L  M   G + D  T   L+  +C +G    ++
Sbjct: 106 FKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVR 165

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F L   MV KG KP+VY++++ I+G CK    ++A  LF ++       PN  TY  +
Sbjct: 166 KIFHL---MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR-GVVPNAVTYNTL 221

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C+  +   A++L  +M   GL P+   Y++L+ G CK GN +    L   M +   
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  Y  II+G+C+  +V++A E+L +     L+ D  TYT L+    ++    +AL 
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF +M + G  P   +Y  L+    +        +   E    G +    T T     +L
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRT-----FL 396

Query: 519 RD---GNISSAVK 528
           +D   GN S A+K
Sbjct: 397 KDFLPGNDSPAIK 409



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 8/309 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++     IG+ +    ++ EM   G      T N ++   C  G ++   ++F  M
Sbjct: 112 IFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLM 171

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ++G+  D  SY + +  YC++ ++ EA      M  RG + +  T   LI A C +  R
Sbjct: 172 VSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALC-QALR 230

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
               Q   L  +M   G  P++  ++ L+DG CK+G  ++   LF ++ R    KP++  
Sbjct: 231 PRDAQV--LFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRR-LVKPDLVV 287

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I+G C+  K+  A+ +L R+  +GL P+ +TYT+L+ G C+ G+   A  L   M 
Sbjct: 288 YTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKME 347

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET- 453
           ++GC P   +YN ++ G  +        +L+ +   R   AD +T T  L + L   ++ 
Sbjct: 348 EDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRT-FLKDFLPGNDSP 406

Query: 454 --KQALGLF 460
             KQ LGLF
Sbjct: 407 AIKQLLGLF 415



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 43/407 (10%)

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           KG+ G++  A      M+ +  +P +     L+  + +    E    LF K +     K 
Sbjct: 15  KGYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLF-KEMEFRGIKY 73

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           NV T + +I+ +C    ++    +  +  ++G  P+   +T+LI G C++G  E A  L+
Sbjct: 74  NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             MG  GC P++   N+++ G C +G++ +    ++K F                 HL  
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDK----VRKIF-----------------HL-- 170

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                       MV  GL PD+++Y+  I  +C+ +K+ E+ + F E    G+ P   TY
Sbjct: 171 ------------MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I    +      A   F++M   G +PD + Y  L+ G CKQ  LDE    ++ M  
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278

Query: 571 KGISPCEVTRVTLAYEYC-----KQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           + + P  V    +    C     K      + +I+E L  K  + T   L+  LC E  +
Sbjct: 279 RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL--KPDVHTYTALVDGLCREGSI 336

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
             A   F K+          S   L   C + N  +    L   +A+
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 4/298 (1%)

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           GN + A    + M      P I  +N ++  + +  + +    L K+   R ++ +  T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           +IL++             +F + +K G  PD+  +TTLI   CR  K + +    +E   
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G  P   T  S++ GY   G I    K F  M   G  PD  +Y   I+G CK  K+DE
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIR 617
           A + ++ M  +G+ P  VT  TL    C+      A ++   +        I   +TL+ 
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSD-LSQRIAEGI 674
             C +  +    + F ++  +    D V    + N    S K     + LS+ I EG+
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 237/507 (46%), Gaps = 28/507 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS 161
           TV+A+L  + G + A  F    +      H  R   V  T+L+     ER          
Sbjct: 83  TVLAALCRQGGCLDAALFLLRVMA-----HETRPTAVSYTTLMRALCAER---------- 127

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
                 R  +   ++ +M  +G+     T   ++   C+   V+ A E+  EMC  G+  
Sbjct: 128 ------RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEP 181

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +   Y  ++  YC+ GR     +    M  RG   D    T LI + C +   G +K+A 
Sbjct: 182 NVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE---GKVKKAT 238

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +++++M+ +G +PNV T+ VLI+ +CK+G  ++A  L   ++       +  TY  +I+G
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK-GVALDAVTYNTLITG 297

Query: 342 YCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
                +M+ A  LLE M   E  + PN  T+ S+I+G CK G   +A+ + D+M + GC 
Sbjct: 298 LSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCA 357

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N+  +N +I GL +  +V++A EL+ +     L+ D  TY+IL++   K  +  +A  L
Sbjct: 358 CNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESL 417

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M + G+ P++  Y  L+AA C Q  M+++  FF E            Y++MI G  R
Sbjct: 418 LSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVV-AYSTMIHGACR 476

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             +  SA ++ + M   G  PD++TY  LI+       L  A +  + M   G  P    
Sbjct: 477 LRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAV 536

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
             +L   Y  +GD+   + ++  +  K
Sbjct: 537 FDSLIKGYGAKGDTEKVLELIREMTAK 563



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 203/435 (46%), Gaps = 8/435 (1%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           DA SY  ++ A CR G   +A  +L  ++         + T L+ A C +   G   QA 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTG---QAV 133

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            LL +M   G +P+V T+  LI GLC     +KA  L  ++  S   +PNV  Y+ ++ G
Sbjct: 134 GLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES-GIEPNVVVYSCLLQG 192

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           YCK  +      + E M  +G+ P+   YT LI   C+ G  ++A  +MD M + G  PN
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  YN +I+ +CK+G V+EA  L     ++ +  D +TY  L++      E  +A+GL  
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 462 RMV--KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
            M+  +  + P++  + ++I   C+  +M+++ +        G      T+  +I G LR
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +  A++    M   G  PD+ TY  LI+G CK  ++D A      M   GI P  V 
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 580 RVTLAYEYCKQGDSATAMIILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            + L    C+QG    A    + + K  KL +   +T+I   C  +    A  F   +L 
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLD 492

Query: 638 KDQNVDRVSLAALKN 652
           +    D V+ + L N
Sbjct: 493 EGLIPDSVTYSMLIN 507



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 209/433 (48%), Gaps = 23/433 (5%)

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           ++ D  +   ++ A C +G  G +  A  LL  M  +  +P   ++T L+  LC +  T 
Sbjct: 74  SVRDAVSYNTVLAALCRQG--GCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTG 130

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L L+ +++   +P+V TY  +I G C    +++A  LL  M E G+ PN   Y+ L
Sbjct: 131 QAVGL-LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCL 189

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G+CK G +E    + + M   G  P++  Y  +ID LC++G+V++A +++ K  +R L
Sbjct: 190 LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + +TY +L++   K+   K+A+ L   M++ G+  D   Y TLI       +M E+  
Sbjct: 250 EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMG 309

Query: 494 FFQEAITAGLF--PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             +E I       P   T+ S+I G  + G +  A +    M + GCA + +T+  LI G
Sbjct: 310 LLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGG 369

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATAMIILESLDKKLWI 609
           L +  K+ +A +  + M   G+ P   T   L   +CK  Q D A      ESL  K+  
Sbjct: 370 LLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA------ESLLSKMRR 423

Query: 610 RTVN-------TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYA 661
             +         L+  LC +  +  A  FF + + K+  +D V+ + +   AC   ++ +
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDE-MHKNCKLDVVAYSTMIHGACRLRDRKS 482

Query: 662 LFSDLSQRIAEGI 674
               L   + EG+
Sbjct: 483 AEEFLKHMLDEGL 495



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 215/451 (47%), Gaps = 18/451 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V  C++  + + GR +    +  EM+  G+         ++   C  G V+ A +V D+M
Sbjct: 185 VYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKM 244

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +  +Y +++ + C+ G V EA    + ML++G  LD  T   LIT     G  
Sbjct: 245 MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLIT-----GLS 299

Query: 275 GSIK--QAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           G ++  +A  LLEEM+      +PNV T   +I GLCK G   +AF++   ++  +    
Sbjct: 300 GVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR-DMMAENGCAC 358

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N+ T+  +I G  +  K+ +A  L++ M   GL P++ TY+ LI G CK+   +RA  L+
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M ++G  P +  Y  ++  LC++G +++A     +   +  + D + Y+ ++    + 
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE-MHKNCKLDVVAYSTMIHGACRL 477

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
            + K A      M+  GL PD   Y+ LI  F     +  +E+  ++   +G  P    +
Sbjct: 478 RDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVF 537

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK---LDEACQFYES 567
            S+I GY   G+    ++  + M     A D+     + + L   ++   L ++   +++
Sbjct: 538 DSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDT 597

Query: 568 MIGKG--ISPCEVTRVTLAYEYCKQGDSATA 596
            + KG  IS  E+T   + ++ C + + A A
Sbjct: 598 EVSKGAVISSHELT--NMLHKLCNKVEPAVA 626


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 232/542 (42%), Gaps = 46/542 (8%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +V EM ++G+ +     +  + +  + G++E A+ +FD M A G+   A +Y  ++  YC
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R   V +    L  M  R  ++   T   ++   C  G    +  A+ +++EM+  G +P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG---DLDGAYNIVKEMIASGCRP 450

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV  +T LI    +      A R+ LK ++     P++  Y ++I G  K ++M+ A   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRV-LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L  M E GL PN  TY + I G+ +   F  A   +  M + G  PN      +I+  CK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG+V EA    +    + +  D  TYT+L++   K  +   A  +F  M   G+ PD+ +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  LI  F +   M+++   F E +  GL P    Y  ++ G+ R G I  A +    M+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P+ +TY  +I G CK   L EA + ++ M  KG+ P      TL    C+  D  
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 595 TAMIILESLDKKL------------WI-----------------------------RTVN 613
            A+ I  +  K              W+                              T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQRIAE 672
            +I  LC E  +  A   FH++   +     ++  +L N   +  + A +F    + IA 
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 673 GI 674
           GI
Sbjct: 870 GI 871



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 243/521 (46%), Gaps = 14/521 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +I RL++  S+++EM + G+ L   T + ++    +    + A+ +  EM + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +      Y   +    + G + +A      M+  G I        LI  +C +    +++
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK---NVR 399

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q +ELL EM ++    + YT+  ++ G+C  G  + A+ +  +++ S   +PNV  YT +
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTL 458

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  + +  +   A  +L+ MKEQG+ P+   Y SLI G  K    + A   +  M + G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y A I G  +      A + +K+  +  +  +K+  T L++E+ K+ +  +A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV  G+  D   YT L+    +  K+ ++E+ F+E    G+ P   +Y  +I G+ 
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A   F  M + G  P+ I Y  L+ G C+  ++++A +  + M  KG+ P  V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           T  T+   YCK GD A A  + + +  K  +       TL+   C    V  A   F   
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--- 755

Query: 636 LGKDQNVDRVSLA---ALKNACYESNKYALFSDLSQRIAEG 673
            G ++     S A   AL N  ++  K  L +++  R+ +G
Sbjct: 756 -GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 89/567 (15%)

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMR 134
           +Q + R +    NL I+I+    E  ++V+ S   +  S + LSFF W          + 
Sbjct: 43  KQENWRDTLVSSNLSIEINP---EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLD 98

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSS-------FAEIGRLKEGFSMVIEMTNNGLPLI 187
            +   A  L + G+FE+A  V++ M+         ++ I R  + F   +  +++G+   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEF---VGKSDDGV--- 152

Query: 188 TSTLNRVVGIACE----LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                 + GI  +     G +E A  VF       +    S  K+++ A  R  R+    
Sbjct: 153 ------LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFW 206

Query: 244 RWLSAMLDRGAILDNATLTLLITAFC---------------DKGFRGS---IKQAFELLE 285
                M++R  + D  T  +LI A C               +K FR +   +  A +L E
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNVHTYTAMISG 341
            M+ KG  P  YT+ VLIDGLCK    E A  L +++    V  DN     HTY+ +I G
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN-----HTYSLLIDG 321

Query: 342 Y-----------------------------------CKEEKMNRAEMLLERMKEQGLLPN 366
                                                KE  M +A+ L + M   GL+P 
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y SLI G+C+  N  + Y+L+  M K     + Y Y  ++ G+C  G +  AY ++K
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +      + + + YT L+   L+ +    A+ +   M + G+ PDI  Y +LI    + K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +M E+  F  E +  GL P   TY + I GY+     +SA KY + M + G  P+ +   
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGI 573
            LI+  CK+ K+ EAC  Y SM+ +GI
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGI 588



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 21/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++  R+ E  S ++EM  NGL     T    +    E      A++   EM   G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-I 277
           V  +      ++  YC+ G+V EA     +M+D+G + D  T T+L+       F+   +
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL----FKNDKV 608

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A E+  EM  KG  P+V+++ VLI+G  K G  +KA  +F ++V  +   PNV  Y  
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNM 667

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+C+  ++ +A+ LL+ M  +GL PN  TY ++I G+CK G+   A+ L D M  +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + Y  ++DG C+   V+ A  +     ++   +    +  L++   K  +T+   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 458 GLFCRMVKAGLN----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +  R++    +    P+   Y  +I   C++  ++ +++ F +   A L PT  TYTS+
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + GY + G  +     F      G  PD+I Y  +I+   K+    +A    + M  K  
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 574 --SPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLC--SEK 623
               C+++  T   L   + K G+   A  ++E++ +  +I    TV  LI + C  S +
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966

Query: 624 RVGMAAL 630
           RV   A+
Sbjct: 967 RVEADAV 973



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A ++ + M  +G+     +Y +++   C++ R+ +A   L  M   G  LDN T +L
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI     KG      +   L+ EMV  G     Y +   I  + K+G  EKA  LF  ++
Sbjct: 318 LIDGLL-KGRNADAAKG--LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S    P    Y ++I GYC+E+ + +   LL  MK++ ++ +  TY +++ G C  G+ 
Sbjct: 375 AS-GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + AY+++  M   GC PN+  Y  +I    +  R  +A  +LK+  ++ +  D   Y  L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K     +A      MV+ GL P+   Y   I+ +    +   ++K+ +E    G+
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P K   T +I  Y + G +  A   ++ M   G   D  TY  L++GL K  K+D+A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            +  M GKGI+P   +   L   + K G+   A  I + +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 183/435 (42%), Gaps = 54/435 (12%)

Query: 275 GSIKQAFELLEEMVRKGWK-PNVYTHTV------------------LIDGLCKKGWTEKA 315
           GS ++A  ++E M+ + W    V++  V                  L DG   KG+ E+A
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170

Query: 316 FRLF-----LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +F     L+LV      P +     ++    +  +++    + + M E+ ++ +  TY
Sbjct: 171 VFVFSSSMGLELV------PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKE---------------------GCTPNIYAYNAII 409
             LI  HC+ GN +   D++    KE                     G  P  Y Y+ +I
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DGLCK  R+++A  LL +     +  D  TY++L+   LK      A GL   MV  G+N
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
              + Y   I    ++  M++++  F   I +GL P  + Y S+I GY R+ N+    + 
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M +        TYG ++ G+C    LD A    + MI  G  P  V   TL   + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
                 AM +L+ + ++     +   N+LI  L   KR+  A  F  +++      +  +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524

Query: 647 LAALKNACYESNKYA 661
             A  +   E++++A
Sbjct: 525 YGAFISGYIEASEFA 539



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 27/373 (7%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           + Y V    L  N   + A E+ + M               ++ F+++G +++  S+  E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL       N ++G  C  G +E A+E+ DEM  +G+  +A +Y  ++  YC+ G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA R    M  +G + D+   T L+   C       +++A  +     +KG   +   
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTN-KKGCASSTAP 768

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRS--DNY-KPNVHTYTAMISGYCKEEKMNRAEMLL 355
              LI+ + K G TE    +  +L+    D + KPN  TY  MI   CKE  +  A+ L 
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            +M+   L+P   TYTSL+ G+ K+G     + + D     G  P+   Y+ II+   K+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888

Query: 416 GRVQEAYELLKKAFQRELQADKITYTI-----LLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G   +A  L+ + F +    D    +I     LLS   K  E + A  +   MV+    P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948

Query: 471 DIHAYTTLIAAFC 483
           D      LI   C
Sbjct: 949 DSATVIELINESC 961



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 44/259 (16%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------------------- 396
           +++ EQ L    ++++ L    C  G+FE+A  +++ M +                    
Sbjct: 90  QKVTEQKL----DSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFV 145

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G + +   +  + DG   KG ++EA  +   +   EL        +LL   L+       
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK-------ESEKFFQEA----------- 498
             ++  MV+  +  D+  Y  LI A CR   ++       ++EK F+ A           
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 499 ---ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
              I  GL P K TY  +I G  +   +  A      M+ +G + DN TY  LI GL K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 556 SKLDEACQFYESMIGKGIS 574
              D A      M+  GI+
Sbjct: 326 RNADAAKGLVHEMVSHGIN 344


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 249/520 (47%), Gaps = 8/520 (1%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
           ++++ C         FE    V   ++ SF  + ++ +       M  + L      +N 
Sbjct: 131 KVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNN 190

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++       +V  A +++DEM  RG+  D  +  +++ A  + G+  E +++      RG
Sbjct: 191 LLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRG 250

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
             +D A  ++L+ A C    R  +  A ELL+EM   GW P+  T+T +I    K+G   
Sbjct: 251 LEVDAAAYSILVQAVCR---RLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFV 307

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A RL  ++V S     NV    +++ GYC    +N A  L + + E G++P+   ++ L
Sbjct: 308 EALRLKDEMV-SVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVL 366

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G  KVG+ E+AY+L   M   G  PN++  N++++G  ++  ++ AY L  +A +  +
Sbjct: 367 INGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI 426

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             + +TY ILL    +  +  +A  L+ +MV  G+ P + +Y  LI   C++  M ++  
Sbjct: 427 -TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYS 485

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +  +  GL P   TYT +I G+ + G+   A   F++M     AP + T+  +I+GL 
Sbjct: 486 MLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLG 545

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IR 610
           K  ++ E      + I +G     +T  ++   + K+G   +A++    + +      + 
Sbjct: 546 KTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVI 605

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           T  +LI  LC   ++G+A      +  K   +D V+ +AL
Sbjct: 606 TYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSAL 645



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 215/476 (45%), Gaps = 42/476 (8%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +F E  RLK+      EM + GLP+       ++   C LG V  A ++FDE+   GV  
Sbjct: 305 NFVEALRLKD------EMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVP 358

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK---------- 271
           D   + +++    ++G + +A    + M   G   +   +  L+  F ++          
Sbjct: 359 DVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLF 418

Query: 272 ---------------------GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
                                G  G + +A  L E+MV KG  P++ ++  LI G CKKG
Sbjct: 419 DEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKG 478

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA+ + LK +     KPN  TYT +I G+ K+    RA ++ E+M    + P  +T+
Sbjct: 479 CMDKAYSM-LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTF 537

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            ++I G  K G      D ++   K+G       YN+IIDG  K+G V  A    ++  +
Sbjct: 538 NTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE 597

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             +  D ITYT L+    K  +   AL +   M   G+  D+ AY+ LI  FC+   M+ 
Sbjct: 598 SGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMES 657

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--NQIGCAPDNITYGAL 548
           + KFF E +  GL P    Y SMI G++   N+ +A+   Q M  N++ C  D   Y ++
Sbjct: 658 ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC--DLQVYTSI 715

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           I GL K+ KL  A   Y  M+ K I P  V    L       G    A  IL+ +D
Sbjct: 716 IGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMD 771



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 224/454 (49%), Gaps = 6/454 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++  +++G +++ + +   M   G+      +N ++    E  L+E+A  +FDE 
Sbjct: 362 IFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA 421

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +Y +++     +G+V EA      M+ +G      +   LI   C KG  
Sbjct: 422 VEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKG-- 478

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +A+ +L+ ++ +G KPN  T+T+LIDG  KKG +E+AF +F +++ + N  P  HT
Sbjct: 479 -CMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA-NIAPTDHT 536

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I+G  K  +++  +  L    +QG +  + TY S+I G  K G  + A      M 
Sbjct: 537 FNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMC 596

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G +P++  Y ++IDGLCK  ++  A E+      + ++ D + Y+ L+    K  + +
Sbjct: 597 ESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDME 656

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A   F  ++  GL P+   Y ++I+ F     M+ +    QE I   +    + YTS+I
Sbjct: 657 SASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSII 716

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G L++G +S A+  +  M      PD + Y  LI+GL    +L+ A +  + M G  I+
Sbjct: 717 GGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNIT 776

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL 607
           P  +    L     ++G+   A  +  E LDK L
Sbjct: 777 PSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGL 810



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 204/457 (44%), Gaps = 49/457 (10%)

Query: 147 GNFERAHE---------------VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G+ E+A+E               ++  ++  F E   L+  + +  E   +G+  +  T 
Sbjct: 374 GDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVV-TY 432

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++    ELG V  A  ++++M ++G+     SY  +++ +C+ G + +A   L ++L+
Sbjct: 433 NILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492

Query: 252 RGAILDNATLTLLITAFCDKGFR--------------------------------GSIKQ 279
           RG   +  T TLLI  F  KG                                  G + +
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             + L   +++G+     T+  +IDG  K+G  + A   + ++  S    P+V TYT++I
Sbjct: 553 TQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCES-GISPDVITYTSLI 611

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G CK  K+  A  +   MK +G+  +   Y++LI G CK+ + E A      +   G T
Sbjct: 612 DGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLT 671

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   YN++I G      ++ A  L ++  + ++  D   YT ++   LK+ +   AL L
Sbjct: 672 PNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDL 731

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           +  M+   + PDI  YT LI       +++ + K  +E     + P+   Y  +I G  R
Sbjct: 732 YSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFR 791

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           +GN+  A +    M   G  PD+ TY  L++G  K S
Sbjct: 792 EGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVS 828



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 8/357 (2%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           ++A +++ S+        A+++     GF K     R ++V    + +N           
Sbjct: 481 DKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN--IAPTDHTFN 538

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            +++   + GR+ E    +      G    + T N ++    + G V+ A   + EMC  
Sbjct: 539 TVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCES 598

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  +Y  ++   C+  ++  A    S M  +G  LD    + LI  FC       +
Sbjct: 599 GISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCK---MHDM 655

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP-NVHTYT 336
           + A +   E++  G  PN   +  +I G       E A  L  ++++  N  P ++  YT
Sbjct: 656 ESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK--NKVPCDLQVYT 713

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++I G  KE K++ A  L   M  + ++P+   YT LI G    G  E A  ++  M   
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGN 773

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             TP++  YN +I G  ++G +QEA+ L  +   + L  D  TY IL++  LK + T
Sbjct: 774 NITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/225 (19%), Positives = 95/225 (42%), Gaps = 3/225 (1%)

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            ++D   +  LL   ++  +   A+  F  M++  L P +     L+ A  R+  + ++ 
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + + E +  G++    T   ++   +++G      K+F+     G   D   Y  L+  +
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWI 609
           C++  L+ AC+  + M   G  P + T   +     KQG+   A+ +   + S+   + +
Sbjct: 266 CRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNV 325

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
               +L++  C    V +A   F +++      D V  + L N C
Sbjct: 326 IVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGC 370


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 181/383 (47%), Gaps = 9/383 (2%)

Query: 214 MCARGVCA-----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           + ARG  A     D ++   +V  YCR G V EA R    M   G   +  T T LI  +
Sbjct: 24  LLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGY 83

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G R   ++   L E+M   G +PN+YT+ +L+   C+ G  E+A RL  + + +   
Sbjct: 84  FIHGRR---EKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERA-RLLFEEMPAKGI 139

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             NV +Y  +I+G C+  KM  A  LLE M+ +G+ P+  T+  L+ G+ K G    A  
Sbjct: 140 TRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALH 199

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
             + M   G  P+   YNA+I G C+   +  A        +R L   K+TYTIL+    
Sbjct: 200 FSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFA 259

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           ++ +  +A  +F  M KAGL  D+  Y  L+ A C +  MK++ K FQ     GL     
Sbjct: 260 RENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y  +I GY R+G+   A+K    M + G  P++ +YG  I  LC   K  EA    + M
Sbjct: 320 IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379

Query: 569 IGKGISPCEVTRVTLAYEYCKQG 591
           +  G+   E  R  L     +QG
Sbjct: 380 VRAGVQTSESVRQVLLNAKARQG 402



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 5/354 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G ++ A  LL    + G    +V   T L+ G C+ G   +A R+F  + R     PN  
Sbjct: 16  GEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRL-GLTPNEV 74

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+TA+I GY    +  +   L E+M+  G+ PN  TY  L+   C+ G FERA  L + M
Sbjct: 75  TFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEM 134

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             +G T N+ +YN +I GLC+  ++++A +LL+   +  ++   +T+ +L+  + K  + 
Sbjct: 135 PAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKM 194

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL    +M  AG  P    Y  LIA FCR + M  + + F +    GL PTK TYT +
Sbjct: 195 SNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTIL 254

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R+ ++  A + F  M + G   D  TYG L+  LC +  + +A + ++S+  KG+
Sbjct: 255 IDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGL 314

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKR 624
               V    L Y Y ++G S  AM ++  + KK ++    +    IR LC++ +
Sbjct: 315 QVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGK 368



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 39/356 (10%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR ++G ++  +M   G+     T N +VG  C  G  E A  +F+EM A+G+  +  SY
Sbjct: 87  GRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSY 146

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR                                     +R  +K A +LLE 
Sbjct: 147 NTLIAGLCR-------------------------------------YR-KMKDATQLLEL 168

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M R+G +P+V T  +L+DG  K G    A   F   +R   Y+P+  TY A+I+G+C+  
Sbjct: 169 MRREGIRPSVVTFNLLVDGYGKAGKMSNALH-FSNQMRMAGYQPSAVTYNALIAGFCRAR 227

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M RA      MKE+GL P   TYT LI    +  + ++A+++   M K G   ++  Y 
Sbjct: 228 DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYG 287

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++  LC +G +++A +L +   ++ LQ   + Y +L+  + ++  + +A+ L   M K 
Sbjct: 288 VLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKK 347

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           G  P+  +Y   I   C   K  E+E    + + AG+  ++     ++    R G+
Sbjct: 348 GFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQGS 403



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 3/278 (1%)

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           T+L++G+C+ G+   A  + D+M + G TPN   + A+I G    GR ++   L +K   
Sbjct: 42  TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             ++ +  TY IL+ E  +  E ++A  LF  M   G+  ++ +Y TLIA  CR +KMK+
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +  +     G+ P+  T+  ++ GY + G +S+A+ +  +M   G  P  +TY ALI+
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KL 607
           G C+   +  A + +  M  +G++P +VT   L   + ++ D   A  +   ++K   ++
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEV 281

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            +RT   L+  LC E  +  A   F  +  K   V  V
Sbjct: 282 DVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 19/285 (6%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FERA  + + M               ++      ++K+   ++  M   G+     T 
Sbjct: 122 GEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTF 181

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V    + G +  A    ++M   G    A +Y  ++  +CR   +  A+R  S M +
Sbjct: 182 NLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKE 241

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG      T T+LI AF  +     + +AFE+   M + G + +V T+ VL+  LC +G 
Sbjct: 242 RGLAPTKVTYTILIDAFARE---NDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGN 298

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A +LF  +        NV  Y  +I GY +E    +A  L+  M+++G +PN+ +Y 
Sbjct: 299 MKDARKLFQSIGEKGLQVGNV-IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYG 357

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             I   C  G    A  L+D M + G   +      +++   ++G
Sbjct: 358 LTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQG 402


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 227/511 (44%), Gaps = 52/511 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MVS +   G+L     +   +    +P    T   VV   C  G +  A  V DEM  RG
Sbjct: 89  MVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRG 145

Query: 219 VCADASSYKLMVVAYCRMGRVT---EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
                  Y +++ A C  G       A R L  +  RG  LD     L++ A CD+G  G
Sbjct: 146 CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG--G 203

Query: 276 SIKQAF------------------------------------ELLEEMVRKGWKPNVYTH 299
           S+ +A                                     +L+EEMVR G  PNV T 
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             LI  LC+ G  E+  ++  ++V      P++  Y  ++ G CKE  +  A  +L+RM 
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMV-DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             GL PN   Y +++ G C    +E+A +L+  M    C  +   +N ++D  C+ G V 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
              ELL++  +     D ITYT +++   K+    +A+ L   M   G  P+  +YT ++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C  ++  ++E    + I  G  P   T+ ++I    + G +  A++  ++M   GC+
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD I+Y  +I GL K  K DEA +    M+ KG+SP  +   ++A    K+G     + +
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQM 562

Query: 600 LESLDKKLWIRT----VNTLIRKLCSEKRVG 626
            +++ + + IR+     N +I  LC  KR G
Sbjct: 563 FDNI-QDVTIRSDAVLYNAVISSLC--KRGG 590



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 192/384 (50%), Gaps = 24/384 (6%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           L  NG FER H+V+  MV           G +  I M         + L+ V    C+ G
Sbjct: 270 LCRNGLFERVHQVLAQMVD---------HGCTPDIRM-------YATVLDGV----CKEG 309

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            +E A E+ D M + G+  +   Y  ++   C   R  +A+  L+ M D    LD+ T  
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           +L+  FC  G    + +  ELLE+M+  G  P+V T+T +I+G CK+G  ++A  + LK 
Sbjct: 370 ILVDFFCQNGL---VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV-MLLKS 425

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + +   +PN  +YT ++ G C  E+   AE L+ +M EQG  PN  T+ ++I   CK G 
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E+A +L+  M   GC+P++ +Y+ +IDGL K G+  EA ELL     + +  + I Y+ 
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           + S   K+    + + +F  +    +  D   Y  +I++ C++     + +F    +++G
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSG 605

Query: 503 LFPTKETYTSMICGYLRDGNISSA 526
             P + TYT +I G   +G +  A
Sbjct: 606 CMPNESTYTILIRGLASEGFVKEA 629



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 190/415 (45%), Gaps = 10/415 (2%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM   +  +  L E      EM   G P    T N ++G  C  GL E   +V  +M   
Sbjct: 236 CMAKRWGRVQDLME------EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D   Y  ++   C+ G +  A   L  M   G   +      ++   C        
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAE---RW 346

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +QA ELL EM       +  T  +L+D  C+ G   +   L  +++      P+V TYT 
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH-GCVPDVITYTT 405

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CKE  ++ A MLL+ M   G  PNT +YT ++ G C    +  A DLM  M ++G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+PN   +N +I+ LCKKG V++A ELLK+        D I+Y+ ++    K  +T +AL
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   MV  G++P+   Y+++ +A  ++ ++    + F       +      Y ++I   
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + G    A+++   M   GC P+  TY  LI GL  +  + EA +    +  KG
Sbjct: 586 CKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 193/403 (47%), Gaps = 4/403 (0%)

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           +++ +EM   G   +  ++  ++   CR G      + L+ M+D G   D      ++  
Sbjct: 245 QDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDG 304

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C +G    ++ A E+L+ M   G KPNV  +  ++ GLC     E+A  L  ++  +D 
Sbjct: 305 VCKEGH---LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC 361

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              +V T+  ++  +C+   + R   LLE+M E G +P+  TYT++I G CK G  + A 
Sbjct: 362 PLDDV-TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+  M   GC PN  +Y  ++ GLC   R  +A +L+ +  ++    + +T+  +++  
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+   +QA+ L  +M+  G +PD+ +Y+T+I    +  K  E+ +     +  G+ P  
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 540

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y+S+     ++G I+  ++ F  +  +    D + Y A+IS LCK+   D A +F   
Sbjct: 541 IIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAY 600

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
           M+  G  P E T   L      +G    A  +L  L  K  +R
Sbjct: 601 MVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 643



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 169/370 (45%), Gaps = 24/370 (6%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN 192
           +R+Y      +   G+ E AHE++                      M + GL       N
Sbjct: 295 IRMYATVLDGVCKEGHLEVAHEILD--------------------RMPSYGLKPNVVCYN 334

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
            V+   C     E AEE+  EM       D  ++ ++V  +C+ G V      L  ML+ 
Sbjct: 335 TVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH 394

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G + D  T T +I  FC +G    I +A  LL+ M   G +PN  ++T+++ GLC     
Sbjct: 395 GCVPDVITYTTVINGFCKEGL---IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERW 451

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
             A  L  +++      PN  T+  +I+  CK+  + +A  LL++M   G  P+  +Y++
Sbjct: 452 VDAEDLMSQMIEQ-GCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G  K G  + A +L+++M  +G +PN   Y++I   L K+GR+    ++        
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +++D + Y  ++S   K+  T +A+     MV +G  P+   YT LI     +  +KE++
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630

Query: 493 KFFQEAITAG 502
           +   E  + G
Sbjct: 631 EMLTELCSKG 640



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 139/346 (40%), Gaps = 43/346 (12%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y AM+SGYC+  ++  A  L   +    + PN  TY  ++   C  G    A  ++D M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRV---QEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           + GC P    Y+ I++  C +G     + A  +L+    R    D     ++L+    Q 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 452 -ETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
               +AL L   +  + G +PD+ +Y  ++   C  K+    +   +E +  G  P   T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 510 YTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           + ++I GYL R+G      +   +M   GC PD   Y  ++ G+CK+  L+ A +  + M
Sbjct: 263 FNTLI-GYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
              G+ P  V                                  NT+++ LCS +R   A
Sbjct: 322 PSYGLKPNVVC--------------------------------YNTVLKGLCSAERWEQA 349

Query: 629 ALFFHKLLGKDQNVDRVSLAALKN-ACYESNKYALFSDLSQRIAEG 673
                ++   D  +D V+   L +  C     Y +   L Q +  G
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 4/197 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  +   ++ +M   G      T N V+   C+ GLVE A E+  +M   G   D  SY 
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYS 509

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++    + G+  EA   L+ M+++G   +    + + +A   +G    + Q F+ ++++
Sbjct: 510 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                + +   +  +I  LCK+G T++A   FL  + S    PN  TYT +I G   E  
Sbjct: 570 T---IRSDAVLYNAVISSLCKRGGTDRAIE-FLAYMVSSGCMPNESTYTILIRGLASEGF 625

Query: 348 MNRAEMLLERMKEQGLL 364
           +  A+ +L  +  +G L
Sbjct: 626 VKEAQEMLTELCSKGAL 642


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 241/527 (45%), Gaps = 23/527 (4%)

Query: 145 SNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           S G F+ A+ +++               C+++   + GRL E      EM  +  P + S
Sbjct: 350 SAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNL-S 408

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C+ G VE A +V D M   G+  +  +  +M+   C+  ++ EA      M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +    D  T   LI      G +G +  A+ L E+M+     PN   +T LI    K 
Sbjct: 469 NHKICSPDEVTFCSLIDGL---GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E   ++F +++      P++    A +    K  +  +   L E +K +G +P+  +
Sbjct: 526 GRKEDGHKIFKEMIHR-GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+G  K G     Y+L   M ++GC  + +AYN  IDG CK G+V +AY+LL++  
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +  Q   +TY  ++    K     +A  LF      GL  ++  Y++LI  F +  ++ 
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+  ++   ++   I+ A+  FQ M  +   P++ITY  LI
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILI 764

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +GLC+  K ++A  F++ M  +G+ P  +T  T+     K G+ A A  + E       +
Sbjct: 765 NGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGV 824

Query: 610 ---RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
               + N +I  L   +R   A   F +   K  N+   +  AL +A
Sbjct: 825 PDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDA 871



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 221/504 (43%), Gaps = 8/504 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F + G++   +    E+ ++GL     T   ++G+ C+   ++ A E+F++M     
Sbjct: 275 IDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRN 334

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y   G+  EA   L     RG I        ++T     G +G + +
Sbjct: 335 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL---GKKGRLGE 391

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A    EEM +K   PN+ T+ VLID LCK G  E AF++    ++     PNV T   MI
Sbjct: 392 ALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKV-RDAMKEAGLFPNVMTVNIMI 449

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK +K++ A  + E M  +   P+  T+ SLI G  K G  + AY L + M      
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y ++I    K GR ++ +++ K+   R    D       +    K  ET +   L
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   G  PD+ +Y+ LI    +    +E+ + F      G       Y + I G+ +
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A +  + M   G  P  +TYG++I GL K  +LDEA   +E     G+    V 
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
             +L   + K G    A +I+E L +K     + T N L+  L   + +  A + F  + 
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 637 GKDQNVDRVSLAALKNACYESNKY 660
                 + ++ + L N      K+
Sbjct: 750 NLKGTPNHITYSILINGLCRVRKF 773



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 186/409 (45%), Gaps = 5/409 (1%)

Query: 154 EVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           EV  C ++    + GR+ + + +  +M ++           ++    + G  E   ++F 
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  RG   D       +    + G   +       +  RG I D  + ++LI      G
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           F    ++ +EL   M  +G   + + +   IDG CK G   KA++L L+ +++   +P V
Sbjct: 597 F---ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL-LEEMKTKGRQPTV 652

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY ++I G  K ++++ A ML E  K  GL  N   Y+SLI G  KVG  + AY +M+ 
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           + ++G TPN+Y +N ++D L K   + EA    +     +   + ITY+IL++   +  +
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRK 772

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A   +  M K GL P+   YTT+IA   +   + E+   F+     G  P   +Y +
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           +I G         A K F+     GC     T  AL+  L K   L++A
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 195/464 (42%), Gaps = 36/464 (7%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F  A      ++ + + +       ++  +M   G  +       V+ +    G ++ A 
Sbjct: 194 FRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAAL 253

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + DEM +  + AD   Y + +  + + G+V  A ++   +   G + D+ T T +I   
Sbjct: 254 SLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVL 313

Query: 269 CDKGFR---------------------------------GSIKQAFELLEEMVRKGWKPN 295
           C KG R                                 G   +A+ LLE    +G  P+
Sbjct: 314 C-KGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPS 372

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V  +  ++  L KKG   +A R F ++ +  +  PN+ TY  +I   CK  ++  A  + 
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMKK--DAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + MKE GL PN  T   +I   CK    + A  + + M  + C+P+   + ++IDGL K+
Sbjct: 431 DAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQ 490

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           GRV +AY L ++    +   + + YT L+    K    +    +F  M+  G +PD+   
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
              +    +  +  +    F+E  + G  P   +Y+ +I G ++ G      + F  M +
Sbjct: 551 NAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKE 610

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            GC  D   Y   I G CK  K+++A Q  E M  KG  P  VT
Sbjct: 611 QGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 172/395 (43%), Gaps = 9/395 (2%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ++L EM   G+ P+  T   LI    K     + F L ++ +R   ++P    YT +I  
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDL-IQCMRKFKFRPAFSAYTTLIGA 207

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
               ++ +    L  +M+E G   + + +T++I    + G  + A  L+D M       +
Sbjct: 208 LSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHAD 267

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           I  YN  ID   K G+V  A++   +     L  D +TYT ++    K     +A+ +F 
Sbjct: 268 IVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFE 327

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           +M +    P  +AY T+I  +    K  E+    +     G  P+   Y  ++    + G
Sbjct: 328 QMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKG 387

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A++ F+ M +   AP+  TY  LI  LCK  +++ A +  ++M   G+ P  +T  
Sbjct: 388 RLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVN 446

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +    CK      A  I E ++ K+      T  +LI  L  + RV  A   + ++L  
Sbjct: 447 IMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506

Query: 639 DQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
           D+  + V   +L  + ++  +    + +F ++  R
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 146/344 (42%), Gaps = 18/344 (5%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTY---------TAMISGYCKEEK-MNRAEMLL-- 355
           K G  ++      K++ S N+ P+V            T ++ G  +  K +N+A      
Sbjct: 58  KSGTAKEVVDDVCKILESGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRW 117

Query: 356 -ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            ER  +Q L P    Y SL+    K   F+    ++  M   G  P+      +I    K
Sbjct: 118 TERKTDQALCPEA--YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIK 175

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
             +++E ++L++   + + +     YT L+       E+   L LF +M + G    +H 
Sbjct: 176 SNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHL 235

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +TT+I  F R+ ++  +     E  +  L      Y   I  + + G +  A K+F  + 
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIK 295

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  PD++TY ++I  LCK ++LDEA + +E M      PC     T+   Y   G   
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFD 355

Query: 595 TAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKL 635
            A  +LE    +  I +V   N ++  L  + R+G A   F ++
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 229/501 (45%), Gaps = 25/501 (4%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++ +  +    E   +V  E+   G    A ++ +++ AY +M  + +A      M D
Sbjct: 95  NMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKD 154

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
                D  T   ++     K     +  A  +   M++    PN+ T ++LIDG+CK G 
Sbjct: 155 FDCKPDVFTYNTVLHVMVRKEV---VLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           T+ A ++F ++ +     PN  TYT +ISG C+ +K + A  L   MK+ G +P++ TY 
Sbjct: 212 TQNALQMFDEMTQR-RILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYN 270

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +L++G CK+G  + A  L+    K+    +   Y+ +IDGL +  R ++A    +K  + 
Sbjct: 271 ALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEH 330

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++ D I YTI++    K  + K AL L   M + GL PD H Y  LI  +C    + E+
Sbjct: 331 NIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEA 390

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +    E      F +  TYT +ICG  R G +  A + F  M + GC P  +T+ ALI G
Sbjct: 391 KSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDG 450

Query: 552 LCKQSKLDEA-CQFYESMIGKGISPCEVTRV--------------TLAYEYCKQGDSATA 596
            CK   +++A   FY+  IG+  +P    R+              T+  + C  G    A
Sbjct: 451 FCKAGNIEKAQLLFYKMEIGR--NPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508

Query: 597 MIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             IL  L    +   I T N LI   C    +  A   F +L  K  + D V+   L N 
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568

Query: 654 CYESNKYA-LFSDLSQRIAEG 673
              +N+    F+ L Q +  G
Sbjct: 569 LLSANREEDAFTVLDQILKNG 589



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 134/560 (23%), Positives = 245/560 (43%), Gaps = 84/560 (15%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ----- 157
           V   + N   S++   FF WA  F + R ++   ++    LI +  FE   +V++     
Sbjct: 62  VTYIIKNPPNSLLGFRFFIWASKFRRLRSWVSHNMIIDM-LIKDNGFELYWQVLKEIKRC 120

Query: 158 ----------CMVSSFAEIGRLK---EGFSMVIE-------------------------- 178
                      ++ ++A++  ++   E F M+ +                          
Sbjct: 121 GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLA 180

Query: 179 -------MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
                  +  N LP I +T + ++   C+ G  + A ++FDEM  R +  +  +Y +++ 
Sbjct: 181 LGIYNRMLKLNCLPNI-ATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIIS 239

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C+  +   A R   AM D G I D+ T   L+  FC     G + +A  LL+   +  
Sbjct: 240 GLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCK---LGRVDEALGLLKYFEKDR 296

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  +   ++ LIDGL +    E A +++ + +   N KP+V  YT M+ G  K  K   A
Sbjct: 297 YVLDKQGYSCLIDGLFRARRFEDA-QVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDA 355

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             LL  M E+GL+P+T+ Y +LI G+C +G  + A  L   + K  C  +   Y  +I G
Sbjct: 356 LRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICG 415

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP- 470
           +C+ G V +A ++  +  +       +T+  L+    K    ++A  LF +M + G NP 
Sbjct: 416 MCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPS 474

Query: 471 -------------DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
                        D  +  T++   C    + ++     +   +G  P   TY  +I G+
Sbjct: 475 LFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGF 534

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-- 575
            + GNI+ A K F+ +   G +PD++TYG LI+GL   ++ ++A    + ++  G +P  
Sbjct: 535 CKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPIT 594

Query: 576 ----------CEVTRVTLAY 585
                     C   ++TLA+
Sbjct: 595 EVYKSFMTWSCRRNKITLAF 614



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 219/548 (39%), Gaps = 93/548 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+ +    M  EMT   +     T   ++   C+    + A  +F  M   G
Sbjct: 202 LIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEA---------DRWL------SAMLD------------ 251
              D+ +Y  ++  +C++GRV EA         DR++      S ++D            
Sbjct: 262 CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQ 321

Query: 252 ---RGAILDNATLTLLITAFCDKGFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
              R     N    +++     KG    G  K A  LL EM  +G  P+ + +  LI G 
Sbjct: 322 VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G  ++A  L L++ ++D +  +  TYT +I G C+   +  A+ +   M++ G  P+
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFS-SACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPS 440

Query: 367 TNTYTSLIYGHCKVGNFERA---------------------------------------- 386
             T+ +LI G CK GN E+A                                        
Sbjct: 441 VVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLC 500

Query: 387 --------YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
                   Y+++  +   G  PNI  YN +I G CK G +  A++L K+   + L  D +
Sbjct: 501 DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSV 560

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L++  L     + A  +  +++K G  P    Y + +   CR+ K+  +   + + 
Sbjct: 561 TYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKY 620

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM----NQIGCAPDNITYGALISGLCK 554
           + +      E   S+   +   G +  AV+    M    N    AP    Y   + GLC+
Sbjct: 621 LRSIPGRDSEVLKSVEENF-EKGEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGLCQ 675

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDK--KLWIRT 611
             +L+EA + + ++    +     + V L Y   K G+    A I L ++DK   L  R 
Sbjct: 676 AGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRI 735

Query: 612 VNTLIRKL 619
            N L++ L
Sbjct: 736 CNRLLKSL 743



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 7/273 (2%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           ++N IID L K    +  +++LK+  +         +T+L+  + K    ++A+  F  M
Sbjct: 93  SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                 PD+  Y T++    R++ +  +   +   +     P   T++ +I G  + G  
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKT 212

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A++ F  M Q    P+ ITY  +ISGLC+  K D A + + +M   G  P  VT   L
Sbjct: 213 QNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNAL 272

Query: 584 AYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
            + +CK G    A+ +L+  +K  ++   +  + LI  L   +R   A +++ K+   + 
Sbjct: 273 LHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNI 332

Query: 641 NVDRVSLAALKNACYESNKYA----LFSDLSQR 669
             D +    +     ++ K+     L +++++R
Sbjct: 333 KPDVILYTIMMKGLSKAGKFKDALRLLNEMTER 365


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 215/482 (44%), Gaps = 41/482 (8%)

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
           C+  V  +  +Y +++   CRMGR+  +      +L  G  +++  +  L+   CD    
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK---PN 331
           G       LL+ M   G  P+  ++++L+ G C +   E+A  L L+++ +D+ +   PN
Sbjct: 150 GEAMDV--LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALEL-LRMMANDHGRSCPPN 206

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TYT +I G CK +  +RAE + ++M + G+ PN +TY  LI+G+  +G ++    +++
Sbjct: 207 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE 266

Query: 392 LMGKEGCTPNIYAYNAIIDGLC--------------------------------KKGRVQ 419
            M   G  P+ Y Y ++++ LC                                K G + 
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A ++  K  Q  L  + + Y  L+    K      A   F +M+  G+ P+I  + +L+
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   K + +E+   E +  G+ P    + ++IC     G +    +    M  +G  
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 446

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD  +Y  LISG C   + DEA + ++ M+  G+SP EVT  TL + YC       A  +
Sbjct: 447 PDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 506

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
              + +K     + T NT++  L   KR   A   +  ++      D  +   + N   +
Sbjct: 507 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 566

Query: 657 SN 658
           SN
Sbjct: 567 SN 568



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 210/459 (45%), Gaps = 10/459 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNN---GLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++  F    R +E   ++  M N+     P    T   V+   C+  L + AE VF +M 
Sbjct: 175 LLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             GV  +  +Y  ++  Y  +G+  E  + L  M  RG   D  T   L+   C      
Sbjct: 235 DNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC------ 288

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++ +    L+ MV  G  P+ +   +      K G  +KA  +F K+ R     PNV  Y
Sbjct: 289 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNY 347

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+I   CK  +++ AE+   +M  +G+ PN   + SL+YG C V  +ERA +L+  M  
Sbjct: 348 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 407

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  PN   +N +I  LC  GRV E   L+       ++ D  +YT L+S +     T +
Sbjct: 408 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDE 467

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +F  MV  GL+P    Y TL+  +C   ++ ++   F+E +  G+ P   TY +++ 
Sbjct: 468 AEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 527

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  +    S A + +  M   G   D  TY  +++GLCK + +DEA + ++S+  KG+  
Sbjct: 528 GLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 587

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
             +T   +     K G    AM +  ++     +  V T
Sbjct: 588 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 626



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 192/408 (47%), Gaps = 5/408 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H +     S++A+ G + +   +  +M  +GL         ++   C+LG
Sbjct: 300 MVENG-LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 358

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ AE  F++M   GV  +   +  +V   C + +   A+  +  MLD+G   +     
Sbjct: 359 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 418

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI   C+    G + +   L++ M   G +P+ +++T LI G C  G T++A ++F  +
Sbjct: 419 TLICNLCNV---GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S    P   TY  ++ GYC   +++ A  L   M  +G+ P   TY ++++G  +   
Sbjct: 476 V-SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M   G   +IY YN I++GLCK   V EA+++ +    + LQ + IT+TI
Sbjct: 535 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 594

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++   LK    + A+ LF  +   GL P++  Y  +      +  ++E +  F      G
Sbjct: 595 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             P  +   +++   L  G+IS A  Y  ++++   + +  T   LIS
Sbjct: 655 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLIS 702



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 222/514 (43%), Gaps = 45/514 (8%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAI---GFAKFRHFMRLYIVCATSLISNGNFERAHE 154
           E+A+ ++  +AN+ G     +   +     G  K + F R   V    +I NG  +  ++
Sbjct: 186 EEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGV-FQQMIDNG-VKPNND 243

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL------------- 201
              C++  +  IG+ KE   M+ +M+  GL     T   ++   C L             
Sbjct: 244 TYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVEN 303

Query: 202 -------------------GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
                              G+++ A ++F++M   G+  +  +Y  ++ A C++GRV +A
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFC--DKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           +   + M++ G   +      L+   C  DK  R     A EL+ EM+ +G  PN     
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER-----AEELVYEMLDQGICPNAVFFN 418

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI  LC  G   +  RL + L+     +P+  +YT +ISGYC   + + AE + + M  
Sbjct: 419 TLICNLCNVGRVMEGRRL-IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            GL P   TY +L++G+C     + AY L   M ++G TP +  YN I+ GL +  R  E
Sbjct: 478 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 537

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A EL         + D  TY I+L+   K     +A  +F  +   GL  +I  +T +I 
Sbjct: 538 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 597

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           A  +  + +++   F      GL P   TY  +    + +G++      F  M + G AP
Sbjct: 598 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAP 657

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           ++    AL+  L  +  +  A  +   +  +  S
Sbjct: 658 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 691



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 456 ALGLFCRMVKA---GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            + LF RMV+     + P+   Y+ LI   CR  ++K S   F   +  G          
Sbjct: 79  VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138

Query: 513 MICGYLRDGNISSAVKYF-QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI-- 569
           ++ G      +  A+    QRM ++GC PD ++Y  L+ G C +++ +EA +    M   
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 570 -GKGISPCEVTRVTLAYEYCK 589
            G+   P  VT  T+    CK
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCK 219


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A ++
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCS---RGRVQAALDI 94

Query: 284 LEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  PN YT+  +I G CK G  ++A ++F +++     KP    Y A+I GY
Sbjct: 95  MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 154

Query: 343 CKEEKMNRAEMLLERMKE-----------------------------------QGLLPNT 367
           C + K++ A +  +RM E                                   +GL P+ 
Sbjct: 155 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 214

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI GHCK GN ++A ++ + M + G    +  Y ++I  L KKG+VQE  +L  +
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 274

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A +R ++ D + Y  L++ H       +A  +   M K  + PD   Y TL+   C   +
Sbjct: 275 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 334

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E    G+ P   TY ++I GY   G++  A++    M   G  P  +TY A
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+  GI+P + T ++L
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 185/365 (50%), Gaps = 11/365 (3%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +++   C  G      +A ELL +M R    PN  T+  +I G C +G  + A  + 
Sbjct: 43  TFNIMLRHLCSAG---KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 95

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHC 378
            ++       PN +TY  +ISG+CK  +++ A  + + M  +G + P    Y +LI G+C
Sbjct: 96  REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 155

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  + A    D M + G    +  YN ++  L   GR  EAYEL+++   + L  D  
Sbjct: 156 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL++ H K+   K+AL +F  M + G+   +  YT+LI A  ++ +++E++K F EA
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P    Y ++I  +   GNI  A +    M +   APD++TY  L+ GLC   ++
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +  + M  +GI P  VT  TL   Y  +GD   A+ I   +  K +   + T N L
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395

Query: 616 IRKLC 620
           I+ LC
Sbjct: 396 IQGLC 400



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 205/451 (45%), Gaps = 38/451 (8%)

Query: 117 LSFFYWAIGFAKFRHFMRLYI-VCATS-------LISNGNFERAHEVMQCMVSSFAEIGR 168
           LS    A  FA F    RL + +C T+       L S G   RA E+++ M    A    
Sbjct: 17  LSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA---- 72

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG-VCADASSYK 227
                                T N V+   C  G V+ A ++  EM  RG +  +  +Y 
Sbjct: 73  --------------------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEE 286
            ++  +C++GRV EA +    ML +G +   A +   LI  +CD+G    +  A    + 
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG---KLDTALLYRDR 169

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV +G    V T+ +L+  L   G   +A+ L  ++       P+V TY  +I+G+CKE 
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEG 228

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + +A  + E M  +G+     TYTSLIY   K G  +    L D   + G  P++  YN
Sbjct: 229 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 288

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           A+I+     G +  A+E++ +  ++ +  D +TY  L+          +A  L   M K 
Sbjct: 289 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+  Y TLI+ +  +  +K++ +   E +  G  PT  TY ++I G  ++G    A
Sbjct: 349 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 408

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               + M + G  PD+ TY +LI GL  + +
Sbjct: 409 ENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           FRL L L  +        T+  M+   C   K  RA  LL +M      PN  TY ++I 
Sbjct: 33  FRLRLPLCTT--------TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 376 GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-EL 433
           G C  G  + A D+M ++  + G  PN Y Y  +I G CK GRV EA ++  +   + E+
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + + Y  L+  +  Q +   AL    RMV+ G+   +  Y  L+ A     +  E+ +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL P   TY  +I G+ ++GN+  A++ F+ M++ G     +TY +LI  L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++ E  + ++  + +GI P  V    L   +   G+   A  I+  ++KK       
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           T NTL+R LC   RV  A     ++  +    D V+   L
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 360


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 232/542 (42%), Gaps = 46/542 (8%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +V EM ++G+ +     +  + +  + G++E A+ +FD M A G+   A +Y  ++  YC
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R   V +    L  M  R  ++   T   ++   C  G    +  A+ +++EM+  G +P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG---DLDGAYNIVKEMIASGCRP 450

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV  +T LI    +      A R+ LK ++     P++  Y ++I G  K ++M+ A   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRV-LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L  M E GL PN  TY + I G+ +   F  A   +  M + G  PN      +I+  CK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG+V EA    +    + +  D  TYT+L++   K  +   A  +F  M   G+ PD+ +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  LI  F +   M+++   F E +  GL P    Y  ++ G+ R G I  A +    M+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P+ +TY  +I G CK   L EA + ++ M  KG+ P      TL    C+  D  
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 595 TAMIILESLDKKL------------WI-----------------------------RTVN 613
            A+ I  +  K              W+                              T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQRIAE 672
            +I  LC E  +  A   FH++   +     ++  +L N   +  + A +F    + IA 
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 673 GI 674
           GI
Sbjct: 870 GI 871



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 216/448 (48%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +I RL++  S+++EM + G+ L   T + ++    +    + A+ +  EM + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +      Y   +    + G + +A      M+  G I        LI  +C +    +++
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK---NVR 399

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q +ELL EM ++    + YT+  ++ G+C  G  + A+ +  +++ S   +PNV  YT +
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTL 458

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  + +  +   A  +L+ MKEQG+ P+   Y SLI G  K    + A   +  M + G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y A I G  +      A + +K+  +  +  +K+  T L++E+ K+ +  +A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV  G+  D   YT L+    +  K+ ++E+ F+E    G+ P   +Y  +I G+ 
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A   F  M + G  P+ I Y  L+ G C+  ++++A +  + M  KG+ P  V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T  T+   YCK GD A A  + + +  K
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLK 726



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 247/568 (43%), Gaps = 91/568 (16%)

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMR 134
           +Q + R +    NL I+I+    E  ++V+ S   +  S + LSFF W          + 
Sbjct: 43  KQENWRDTLVSSNLSIEINP---EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLD 98

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSS-------FAEIGRLKEGFSMVIEMTNNGLPLI 187
            +   A  L + G+FE+A  V++ M+         ++ I R  + F   +  +++G+   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEF---VGKSDDGV--- 152

Query: 188 TSTLNRVVGIACELGLV--EYAEE---VFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
                 + GI  + G +  EY EE   VF       +    S  K+++ A  R  R+   
Sbjct: 153 ------LFGILFD-GYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFC---------------DKGFRGS---IKQAFELL 284
                 M++R  + D  T  +LI A C               +K FR +   +  A +L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNVHTYTAMIS 340
           E M+ KG  P  YT+ VLIDGLCK    E A  L +++    V  DN     HTY+ +I 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN-----HTYSLLID 320

Query: 341 GY-----------------------------------CKEEKMNRAEMLLERMKEQGLLP 365
           G                                     KE  M +A+ L + M   GL+P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
               Y SLI G+C+  N  + Y+L+  M K     + Y Y  ++ G+C  G +  AY ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           K+      + + + YT L+   L+ +    A+ +   M + G+ PDI  Y +LI    + 
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
           K+M E+  F  E +  GL P   TY + I GY+     +SA KY + M + G  P+ +  
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGI 573
             LI+  CK+ K+ EAC  Y SM+ +GI
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGI 588



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 21/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++  R+ E  S ++EM  NGL     T    +    E      A++   EM   G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-I 277
           V  +      ++  YC+ G+V EA     +M+D+G + D  T T+L+       F+   +
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL----FKNDKV 608

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A E+  EM  KG  P+V+++ VLI+G  K G  +KA  +F ++V  +   PNV  Y  
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNM 667

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+C+  ++ +A+ LL+ M  +GL PN  TY ++I G+CK G+   A+ L D M  +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + Y  ++DG C+   V+ A  +     ++   +    +  L++   K  +T+   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 458 GLFCRMVKAGLN----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +  R++    +    P+   Y  +I   C++  ++ +++ F +   A L PT  TYTS+
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + GY + G  +     F      G  PD+I Y  +I+   K+    +A    + M  K  
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 574 --SPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLC--SEK 623
               C+++  T   L   + K G+   A  ++E++ +  +I    TV  LI + C  S +
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966

Query: 624 RVGMAAL 630
           RV   A+
Sbjct: 967 RVEADAV 973



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A ++ + M  +G+     +Y +++   C++ R+ +A   L  M   G  LDN T +L
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI     KG      +   L+ EMV  G     Y +   I  + K+G  EKA  LF  ++
Sbjct: 318 LIDGLL-KGRNADAAKG--LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S    P    Y ++I GYC+E+ + +   LL  MK++ ++ +  TY +++ G C  G+ 
Sbjct: 375 AS-GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + AY+++  M   GC PN+  Y  +I    +  R  +A  +LK+  ++ +  D   Y  L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K     +A      MV+ GL P+   Y   I+ +    +   ++K+ +E    G+
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P K   T +I  Y + G +  A   ++ M   G   D  TY  L++GL K  K+D+A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            +  M GKGI+P   +   L   + K G+   A  I + +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 27/373 (7%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           + Y V    L  N   + A E+ + M               ++ F+++G +++  S+  E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL       N ++G  C  G +E A+E+ DEM  +G+  +A +Y  ++  YC+ G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA R    M  +G + D+   T L+   C       +++A  +     +KG   +   
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTN-KKGCASSTAP 768

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRS--DNY-KPNVHTYTAMISGYCKEEKMNRAEMLL 355
              LI+ + K G TE    +  +L+    D + KPN  TY  MI   CKE  +  A+ L 
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            +M+   L+P   TYTSL+ G+ K+G     + + D     G  P+   Y+ II+   K+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888

Query: 416 GRVQEAYELLKKAFQRELQADKITYTI-----LLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G   +A  L+ + F +    D    +I     LLS   K  E + A  +   MV+    P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948

Query: 471 DIHAYTTLIAAFC 483
           D      LI   C
Sbjct: 949 DSATVIELINESC 961



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/447 (20%), Positives = 164/447 (36%), Gaps = 78/447 (17%)

Query: 275 GSIKQAFELLEEMVRKGWK-PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           GS ++A  ++E M+ + W    V++  V     C + +  K+    L             
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVR----CSQEFVGKSDDGVL------------- 153

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            +  +  GY  +E +  A  +        L+P  +    L+    +    +  +D+   M
Sbjct: 154 -FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL---KKAFQ------------------RE 432
            +     ++  Y+ +I   C+ G VQ   ++L   +K F+                  + 
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 433 LQADKITYTIL--------------------------LSEH---------LKQAETKQAL 457
           L   K TY +L                          L  H         LK      A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
           GL   MV  G+N   + Y   I    ++  M++++  F   I +GL P  + Y S+I GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R+ N+    +    M +        TYG ++ G+C    LD A    + MI  G  P  
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHK 634
           V   TL   + +      AM +L+ + ++     +   N+LI  L   KR+  A  F  +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYA 661
           ++      +  +  A  +   E++++A
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFA 539



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 44/259 (16%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------------------- 396
           +++ EQ L    ++++ L    C  G+FE+A  +++ M +                    
Sbjct: 90  QKVTEQKL----DSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFV 145

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G + +   +  + DG   K  ++EA  +   +   EL        +LL   L+       
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK-------ESEKFFQEA----------- 498
             ++  MV+  +  D+  Y  LI A CR   ++       ++EK F+ A           
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 499 ---ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
              I  GL P K TY  +I G  +   +  A      M+ +G + DN TY  LI GL K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 556 SKLDEACQFYESMIGKGIS 574
              D A      M+  GI+
Sbjct: 326 RNADAAKGLVHEMVSHGIN 344


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 11/487 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G   + G          EM  R +C D +++ +++   C  G   ++   +  M
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   ++  +C KG     K A ELL+ M  KG   +V T+ +LI  LC+ 
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKG---RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 316

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               K + L L+ +R     PN  TY  +I+G+  E K+  A  LL  M   GL PN  T
Sbjct: 317 NRIAKGY-LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI GH   GNF+ A  +  +M  +G TP+  +Y  ++DGLCK      A     +  
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +   +ITYT ++    K     +A+ L   M K G++PDI  Y+ LI  FC+  + K
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++        GL P    Y+++I    R G +  A++ ++ M   G   D+ T+  L+
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---K 606
           + LCK  K+ EA +F   M   GI P  V+   L   Y   G+   A  + + + K    
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----L 662
               T  +L++ LC    +  A  F   L      VD V    L  A  +S   A    L
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675

Query: 663 FSDLSQR 669
           F ++ QR
Sbjct: 676 FGEMVQR 682



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 14/509 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++      G  KE   M   M   GL     +   ++   C+    + A   + 
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   GVC    +Y  M+   C+ G + EA   L+ M   G   D  T + LI  FC  G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                K A E++  + R G  PN   ++ LI   C+ G  ++A R++  ++   + + + 
Sbjct: 493 ---RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +++  CK  K+  AE  +  M   G+LPNT ++  LI G+   G   +A+ + D 
Sbjct: 550 -TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K G  P  + Y +++ GLCK G ++EA + LK         D + Y  LL+   K   
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYT 511
             +A+ LF  MV+  + PD + YT+LI+  CR+ K   +  F +EA   G + P K  YT
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             + G  + G   + + + ++M+ +G  PD +T  A+I G  +  K+++       M  +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILES------LDKKLWIRTVNTLIRKLCSEKRV 625
              P   T   L + Y K+ D +T+ ++  S      L  KL   T ++L+  +C    +
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL---TCHSLVLGICESNML 845

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +        + +   VDR +   L + C
Sbjct: 846 EIGLKILKAFICRGVEVDRYTFNMLISKC 874



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 220/471 (46%), Gaps = 19/471 (4%)

Query: 143 LISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLI 187
           L + G+FE++  +MQ M  S               + + GR K    ++  M + G+   
Sbjct: 243 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 302

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C    +     +  +M  R +  +  +Y  ++  +   G+V  A + L+
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ML  G   ++ T   LI     +G   + K+A ++   M  KG  P+  ++ VL+DGLC
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEG---NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K    + A   ++++ R+      + TYT MI G CK   ++ A +LL  M + G+ P+ 
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY++LI G CKVG F+ A +++  + + G +PN   Y+ +I   C+ G ++EA  + + 
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D  T+ +L++   K  +  +A      M   G+ P+  ++  LI  +    +
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
             ++   F E    G  PT  TY S++ G  + G++  A K+ + ++ +  A D + Y  
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           L++ +CK   L +A   +  M+ + I P   T  +L    C++G +  A++
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 230/526 (43%), Gaps = 43/526 (8%)

Query: 151  RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
            R H     +V+S  + G++ E    +  MT++G+   T + + ++      G    A  V
Sbjct: 546  RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605

Query: 211  FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            FDEM   G      +Y  ++   C+ G + EA+++L ++    A +D      L+TA C 
Sbjct: 606  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----- 325
             G   ++ +A  L  EMV++   P+ YT+T LI GLC+KG T  A  LF K   +     
Sbjct: 666  SG---NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVL 721

Query: 326  -----------------------------DN--YKPNVHTYTAMISGYCKEEKMNRAEML 354
                                         DN  + P++ T  AMI GY +  K+ +   L
Sbjct: 722  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781

Query: 355  LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            L  M  Q   PN  TY  L++G+ K  +   ++ L   +   G  P+    ++++ G+C+
Sbjct: 782  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841

Query: 415  KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
               ++   ++LK    R ++ D+ T+ +L+S+     E   A  L   M   G++ D   
Sbjct: 842  SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901

Query: 475  YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
               +++   R  + +ES     E    G+ P    Y  +I G  R G+I +A    + M 
Sbjct: 902  CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961

Query: 535  QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                 P N+   A++  L K  K DEA      M+   + P   +  TL +  CK G+  
Sbjct: 962  AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 1021

Query: 595  TAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             A+   +++ +   KL + + N LI  LC++  + +A   + ++ G
Sbjct: 1022 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 6/375 (1%)

Query: 145  SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
            + GN      +  C V    + G+ K G     +M N G      T N ++     +G +
Sbjct: 716  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775

Query: 205  EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
            E   ++  EM  +    + ++Y +++  Y +   V+ +     +++  G + D  T   L
Sbjct: 776  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835

Query: 265  ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
            +   C+      ++   ++L+  + +G + + YT  +LI   C  G    AF L +K++ 
Sbjct: 836  VLGICESNM---LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL-VKVMT 891

Query: 325  SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            S     +  T  AM+S   +  +   + M+L  M +QG+ P +  Y  LI G C+VG+ +
Sbjct: 892  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951

Query: 385  RAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A+ +  +++  + C PN+ A +A++  L K G+  EA  LL+   + +L     ++T L
Sbjct: 952  TAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 1010

Query: 444  LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            +    K     +AL L   M   GL  D+ +Y  LI   C +  M  + + ++E    G 
Sbjct: 1011 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1070

Query: 504  FPTKETYTSMICGYL 518
                 TY ++I G L
Sbjct: 1071 LANATTYKALIRGLL 1085



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 198/540 (36%), Gaps = 121/540 (22%)

Query: 131  HFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSM 175
            HF   + V  TSL   G    A E M+CM S                +   G   + FS+
Sbjct: 548  HFT--FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605

Query: 176  VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
              EMT  G      T   ++   C+ G +  AE+    + A     D   Y  ++ A C+
Sbjct: 606  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665

Query: 236  MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------FRGSI----- 277
             G + +A      M+ R  + D+ T T LI+  C KG              RG++     
Sbjct: 666  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725

Query: 278  ---------------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                           K      E+M   G  P++ T   +IDG  + G  EK   L L  
Sbjct: 726  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL-LPE 784

Query: 323  VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT--------------- 367
            + + N  PN+ TY  ++ GY K + ++ + +L   +   G+LP+                
Sbjct: 785  MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844

Query: 368  --------------------NTYTSLIYGHCKVGNFERAYDLMDLM-------------- 393
                                 T+  LI   C  G    A+DL+ +M              
Sbjct: 845  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904

Query: 394  ---------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
                                  K+G +P    Y  +I+GLC+ G ++ A+ + ++    +
Sbjct: 905  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964

Query: 433  LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            +    +  + ++    K  +  +A  L   M+K  L P I ++TTL+   C+   + E+ 
Sbjct: 965  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024

Query: 493  KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            +        GL     +Y  +I G    G+++ A + ++ M   G   +  TY ALI GL
Sbjct: 1025 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 5/364 (1%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G +   F   +   R  N  P+V  Y  +I  Y +E  +  +  +   M   G  P+  T
Sbjct: 143 GKSSFVFGALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT 200

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             +++    K G     +  +  M K    P++  +N +I+ LC +G  +++  L++K  
Sbjct: 201 CNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME 260

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +       +TY  +L  + K+   K A+ L   M   G++ D+  Y  LI   CR  ++ 
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +     ++     + P + TY ++I G+  +G +  A +    M   G +P+++T+ ALI
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
            G   +    EA + +  M  KG++P EV+   L    CK  +   A      + +    
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           +   T   +I  LC    +  A +  +++     + D V+ +AL N   +  ++    ++
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500

Query: 667 SQRI 670
             RI
Sbjct: 501 VCRI 504


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 225/477 (47%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T + VV   C+   ++ AE    +M  +G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y   G+  EA R    M  +  + D  T  +L+ + C  G    IK
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYG---KIK 341

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++ ++++G   KG       LF  L+  D   P + T+  +
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNVL 400

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ PN  TYT++I   C++G  + A +  + M  +G 
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAY+ +I G C  G + +A EL+ +     +  D + ++ +++   K      A  
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+P    Y+ L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+  + 
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 579 TRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   +     K      A+ +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 697



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+  +  T N ++      G+++ A  +F+EM   G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++ A CR+G++ +A    + M+D+G   D      LI  FC     GS+ 
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT---HGSLL 481

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G   ++   + +I+ LCK G    A  +F  L  +    P    Y+ +
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSML 540

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M ++G 
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN IIDGL + GR   A     +  +  +  +K TY+I+L    K     +A+ 
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  DI    T+IA   + ++++E++  F     +GL P   TY+ MI   +
Sbjct: 661 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI 720

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC PD+     ++  L K++++  A  +   +  +  S   +
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 780

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 781 TTMLLVDLFSSKG 793



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 233/543 (42%), Gaps = 86/543 (15%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTL 263
           E A   F ++   G+  D      ++  +C   R  EA D  L    + G + D  + ++
Sbjct: 128 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           L+ + CD+G  G   QA +LL  M   G    P+V  +  +IDG  K+G   KA  LF +
Sbjct: 188 LLKSLCDQGKSG---QADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 244

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH---- 377
           +V+     P+  TY++++   CK   M++AE  L +M  +G+LPN  TY +LIYG+    
Sbjct: 245 MVQR-GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303

Query: 378 -------------------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
                                          CK G  + A D+ D M  +G  P++++YN
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +++G   KG + +  +L        +     T+ +L+  +       +A+ +F  M   
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN---- 522
           G+ P++  YTT+IAA CR  KM ++ + F + I  G+ P K  Y  +I G+   G+    
Sbjct: 424 GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483

Query: 523 -------------------------------ISSAVKYFQRMNQIGCAPDNITYGALISG 551
                                          +  A   F     +G  P  + Y  L+ G
Sbjct: 484 KELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIR 610
            C   K+++A + +++M+  GI P +V   TL   YCK G     + +  E L K +   
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603

Query: 611 TV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALF 663
           T+  N +I  L    R   A + FH++      +++ + + +     KN C++   + LF
Sbjct: 604 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF-LF 662

Query: 664 SDL 666
            +L
Sbjct: 663 KEL 665



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 202/483 (41%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM    +     T N ++G  C+ G ++ A +VFD M  +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G      T  +LI A+ + G    + 
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM---LD 411

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KPNV T+T +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 412 KAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYHCL 470

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P    Y+ L+ G+C VG  E+A  + D M   G  PN   Y  +++G CK GR+ E   
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  Q+ ++   I Y I++    +   T  A   F  M ++G+  +   Y+ ++    
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 650

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++ G  P  +
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVV 710

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 604 DKK 606
           D++
Sbjct: 771 DER 773



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 222/479 (46%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSG-PALAVALFNRAASRAQ 102

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  +D      L+  FC+    
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA--- 159

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 160 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY+S+++  CK    ++A   
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +G  PN + YN +I G    G+ +EA  + K+  ++ +  D +T+ +L+    K
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +Y  ++  +  +  + +    F   +  G+ P   T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  P+ +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G++P +     L   +C  G    A  +I E ++  + +  V  +++I  LC   RV
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L     + ++   C+LG V  A+ +FD    
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+   A  Y +++  YC +G++ +A R   AM+  G   ++     L+  +C     G 
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI---GR 584

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM++KG KP+   + ++IDGL + G T                        
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K ++ T   MI+G  +  ++  A+ L   +   
Sbjct: 645 VLRGLFKNRCFDEAIFLF-KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL+P   TY+ +I    K G  E A D+   M   GC P+    N ++  L KK  +  A
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVD 787


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 268/547 (48%), Gaps = 21/547 (3%)

Query: 61  LVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFF 120
           L K VC +V++ ++      +S  + N+  ++ S    Q   V+ +L+ + G  V+ +FF
Sbjct: 13  LAKIVCGIVVKGHW------NSLLKPNVGSNLTSTILNQ---VLLNLSLD-GCCVSWAFF 62

Query: 121 YWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM-VSSFAEIGRLKEGFSMVIEM 179
            W       +H ++       +L  +  F+ A  +++ + V  +     +      + + 
Sbjct: 63  KWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDD 122

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            ++     +  L+ +V       + + A +VF+ M   G      +  +++ +  +    
Sbjct: 123 PDSN----SQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
               +    M+  G + +     +LI A C  G    +++A +LL EM  +   P+++T+
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSG---DVEKAEQLLNEMESRFIFPDLFTY 235

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             LI   CKKG   +A  +  ++ R     P++ TY ++I G+C+E +M  A  L   + 
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERG-GVSPDIVTYNSLIYGFCREGRMREALRLFREI- 293

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  PN  TYT+LI G+C+V + E A  L ++M  EG  P +  YN+I+  LC++G+++
Sbjct: 294 -NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A  LL +  +R+++ D +T   L++ + K  +   A+ +  +M++AGL PD   +  LI
Sbjct: 353 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             FC+  ++  +++F  E + AG  P+  TY+ ++  Y    N  + ++    +++ G  
Sbjct: 413 HGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 472

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D   Y ALI  LCK  K++ A + +  M GKG+    V   +LAY Y K G +  A  +
Sbjct: 473 VDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 532

Query: 600 LESLDKK 606
           L+ +DK+
Sbjct: 533 LDEMDKR 539



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 201/395 (50%), Gaps = 12/395 (3%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A ++ E M   G+KP+++  TVL++ L K   T   ++++ K+VR     PN+H +  
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV-GVVPNIHIFNV 202

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   CK   + +AE LL  M+ + + P+  TY +LI  +CK G    A  + D M + G
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA---DKITYTILLSEHLKQAETK 454
            +P+I  YN++I G C++GR++EA  L      RE+     + +TYT L+  + +  + +
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLF-----REINGATPNHVTYTTLIDGYCRVNDLE 317

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M   GL+P +  Y +++   C + K+K++ +   E     + P   T  ++I
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G++ SA+K  ++M + G  PD  T+ ALI G CK  ++D A +F   M+  G S
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P   T   L   Y  Q +    + + + L +K   + I     LIR+LC   ++  A   
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERI 497

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           F  + GK    D V   +L  A +++ K    SD+
Sbjct: 498 FTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 532



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 6/334 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C+ G+   A  + D M   GV  D  +Y  ++  +CR GR+ EA R    +
Sbjct: 234 TYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI 293

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              GA  ++ T T LI  +C       +++A  L E M  +G  P V T+  ++  LC++
Sbjct: 294 --NGATPNHVTYTTLIDGYCRVN---DLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 348

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  + A RL L  +     +P+  T   +I+ YCK   M  A  + ++M E GL P+  T
Sbjct: 349 GKIKDANRL-LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFT 407

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI+G CK+   + A + +  M   G +P+   Y+ ++D    +   +    L  +  
Sbjct: 408 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 467

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D   Y  L+    K  + + A  +F  M   G+  D   YT+L  A+ +  K  
Sbjct: 468 RKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAI 527

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            +     E     L  T + Y      Y  DG+I
Sbjct: 528 AASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 185/365 (50%), Gaps = 11/365 (3%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +++   C  G      +A ELL +M R    PN  T+  +I G C +G  + A  + 
Sbjct: 156 TFNIMLRHLCSAG---KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 208

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHC 378
            ++       PN +TY  +ISG+CK  +++ A  + + M  +G + P    Y +LI G+C
Sbjct: 209 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 268

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G  + A    D M + G    +  YN ++  L   GR  EAYEL+++   + L  D  
Sbjct: 269 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVF 328

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY IL++ H K+   K+AL +F  M + G+   +  YT+LI A  ++ +++E++K F EA
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P    Y ++I  +   GNI  A +    M +   APD++TY  L+ GLC   ++
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           DEA +  + M  +GI P  VT  TL   Y  +GD   A+ I   +  K +   + T N L
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 508

Query: 616 IRKLC 620
           I+ LC
Sbjct: 509 IQGLC 513



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 185/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A ++
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCS---RGRVQAALDI 207

Query: 284 LEEMV-RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  PN YT+  +I G CK G  ++A ++F +++     KP    Y A+I GY
Sbjct: 208 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 267

Query: 343 CKEEKMNRAEMLLERMKE-----------------------------------QGLLPNT 367
           C + K++ A +  +RM E                                   +GL  + 
Sbjct: 268 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDV 327

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI GHCK GN ++A ++ + M + G    +  Y ++I  L KKG+VQE  +L  +
Sbjct: 328 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 387

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A +R ++ D + Y  L++ H       +A  +   M K  + PD   Y TL+   C   +
Sbjct: 388 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 447

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E    G+ P   TY ++I GY   G++  A++    M   G  P  +TY A
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+  GI+P + T ++L
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 210/462 (45%), Gaps = 60/462 (12%)

Query: 117 LSFFYWAIGFAKFRHFMRLYI-VCATS-------LISNGNFERAHEVMQCM--------- 159
           LS    A  FA F    RL + +C T+       L S G   RA E+++ M         
Sbjct: 130 LSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYN 189

Query: 160 --VSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++ F   GR++    ++ EM    G+     T   V+   C++G V+ A +VFDEM  
Sbjct: 190 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 249

Query: 217 RG-VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           +G V  +A  Y  ++  YC  G++  A  +   M++RG  +  AT  LL+ A    G RG
Sbjct: 250 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG-RG 308

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +  +A+EL+EEM  KG   +V+T+ +L                                 
Sbjct: 309 T--EAYELVEEMGGKGLALDVFTYNIL--------------------------------- 333

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
              I+G+CKE  + +A  + E M  +G+     TYTSLIY   K G  +    L D   +
Sbjct: 334 ---INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YNA+I+     G +  A+E++ +  ++ +  D +TY  L+          +
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L   M K G+ PD+  Y TLI+ +  +  +K++ +   E +  G  PT  TY ++I 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           G  ++G    A    + M + G  PD+ TY +LI GL  + +
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 17/336 (5%)

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
           FRL L L  +        T+  M+   C   K  RA  LL +M      PN  TY ++I 
Sbjct: 146 FRLRLPLCTT--------TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 376 GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-EL 433
           G C  G  + A D+M ++  + G  PN Y Y  +I G CK GRV EA ++  +   + E+
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + + + Y  L+  +  Q +   AL    RMV+ G+   +  Y  L+ A     +  E+ +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL     TY  +I G+ ++GN+  A++ F+ M++ G     +TY +LI  L 
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR--- 610
           K+ ++ E  + ++  + +GI P  V    L   +   G+   A  I+  ++KK       
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           T NTL+R LC   RV  A     ++  +    D V+
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 228/457 (49%), Gaps = 10/457 (2%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E +      +++ F++ G+++E      +M  +G  +   + N ++   C+ GL + A
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             V DEM   G+    S+Y + + A C  GR+ +A   LS+M    A  D  +   L+  
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHG 383

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +   G      +A  L +++      P++ T+  LIDGLC+ G  E A RL  ++     
Sbjct: 384 YIKMG---KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P+V TYT ++ G+ K   ++ A  + + M  +G+ P+   YT+   G  ++G+ ++A+
Sbjct: 441 F-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499

Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            L + ++  +   P++  YN  IDGLCK G + +A E  +K F+  L  D +TYT ++  
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +L+  + K A  L+  M++  L P +  Y  LI    +  +++++ ++  E    G+ P 
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +++ G  + GNI  A +Y  +M + G  P+  +Y  LIS  C   K +E  + Y+
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            M+ K I P   T   L +++ ++   +  +  LE L
Sbjct: 680 EMLDKEIEPDGYTHRAL-FKHLEKDHESREVEFLERL 715



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 42/377 (11%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +A  + E M+  G  P V T   ++D   K G  E+  +++L++ R  N + +  TY 
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTYN 277

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+G+ K  KM  A      M+  G      ++  LI G+CK G F+ A+ + D M   
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P    YN  I  LC  GR+ +A ELL          D ++Y  L+  ++K  +  +A
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 393

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF  +    ++P I  Y TLI   C    ++ +++  +E  T  +FP   TYT+++ G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453

Query: 517 YLRDGNISSAVKYFQRMNQIGC------------------------------------AP 540
           ++++GN+S A + +  M + G                                     AP
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D   Y   I GLCK   L +A +F   +   G+ P  VT  T+   Y + G    A  + 
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573

Query: 601 -ESLDKKLWIRTVNTLI 616
            E L K+L+   +   +
Sbjct: 574 DEMLRKRLYPSVITYFV 590



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%)

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
           Y K+    +  +  E+M  +G LP+      ++          +A  + + M + G  P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N ++D   K G ++   ++  +  +R ++  ++TY IL++   K  + ++A     
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M ++G     +++  LI  +C+Q    ++     E + AG++PT  TY   IC     G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            I  A +    M     APD ++Y  L+ G  K  K  EA   ++ +    I P  VT  
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           TL    C+ G+   A  + E +  +L    + T  TL++       + MA   + ++L K
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 21/325 (6%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL--------- 363
           E AFR F  + R  + K +   + AM+    + + M+ A ++ ER  + G+         
Sbjct: 100 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLID 159

Query: 364 -----LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                L        L++ + K    E+     + M ++G  P++   N ++  L     +
Sbjct: 160 GSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMM 219

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A  + +   +  +    IT+  +L    K  + ++   ++  M +  +      Y  L
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  F +  KM+E+ +F  +   +G   T  ++  +I GY + G    A      M   G 
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P   TY   I  LC   ++D+A +   SM     +P  V+  TL + Y K G    A +
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASL 395

Query: 599 ILESL---DKKLWIRTVNTLIRKLC 620
           + + L   D    I T NTLI  LC
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLC 420



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 13/228 (5%)

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + K++  ++ L  F +M++ G  P +     ++      + M ++   ++  I  G+ PT
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ +M+    + G++    K +  M +       +TY  LI+G  K  K++EA +F+ 
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW--IRTVNTLIRKLCSE 622
            M   G +    +   L   YCKQG  D A   +  E L+  ++    T N  I  LC  
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG-VTDEMLNAGIYPTTSTYNIYICALCDF 356

Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDL 666
            R+  A     +LL      D VS   L +   +  K+     LF DL
Sbjct: 357 GRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 243/544 (44%), Gaps = 9/544 (1%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    + L        L ++ +  H +  P  ++    + S+   +  +
Sbjct: 28  SLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHS 87

Query: 103 VVASLANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMV 160
            + SL+ +  S  +    +  AI      H  R+ +   A + I     +        ++
Sbjct: 88  TLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLI 147

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
                 G++ E   +  +M   G      T   ++   C++G    A  +   M  +G C
Sbjct: 148 RGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGNC 206

Query: 221 -ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             +   +  ++ + C+  +VTEA    S M+ +G   +  T   LI   C        K 
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKH 263

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L+ EMV     P+V+T   ++D LCK+G   +A  +   ++     +PNV TY A++
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALM 322

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C   +++ A  + + M  +  + N  +Y +LI G+CK+ + ++A  L + M ++  T
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   YN +I GLC  GR+Q+A  L  +   R    D +TY  L     K     +A+ L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +  +  +PDI  YTT++   CR  +++++   F    + GL P   TY  MI G  +
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A K F  MN+ GC+P++ TY  +  G  + ++     +  E M+ +G S  +V+
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS-VDVS 561

Query: 580 RVTL 583
             TL
Sbjct: 562 TTTL 565



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S A+        S+  +M + G+P    TL  V+   C L  V++A     ++   G
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLG 135

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA+++  ++   C  G++ EA      M+  G   +  T   LI   C  G   +  
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVG---NTS 192

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL  M +   +PNV   + LID LCK     +AF +F +++ +    PN+ TY ++
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSL 251

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  +      L+  M +  ++P+  T  +++   CK G    A+D++D+M   G 
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YNA++DG C +  V  A ++      ++  A+ I+Y  L++ + K     +A+ 
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M +  L P+   Y TLI   C   +++++   F E +  G  P   TY ++     
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ ++  A+   + +      PD   Y  ++ G+C+  +L++A   + ++  KG+ P   
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   + +  CKQG  A A  +   ++K 
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKN 519



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S   + R+   FS + ++   G     +T   ++   C  G +  A  +FD+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C++G  + A R L +M       +    + LI + C       + 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR---QVT 227

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  EM+ KG  PN+ T+  LI GLCK    +    L  ++V S    P+V T   +
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTV 286

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CKE  +  A  +++ M  +G+ PN  TY +L+ GHC     + A  + D M  + C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+ +YN +I+G CK   V +A  L ++  ++EL  + +TY  L+         + A+ 
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G  PD+  Y TL    C+ + + ++    +    +   P  + YT+++ G  
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F  ++  G  P+  TY  +I GLCKQ  L EA + +  M   G SP + 
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T   +   + +  ++   + +LE +
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEM 551



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   V  A  +F EM  +G+  +  +Y  ++   C++         ++ M+D   + D 
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            TL  ++ A C +G    + +A ++++ M+ +G +PNV T+  L+DG C +   + A ++
Sbjct: 281 FTLNTVVDALCKEGM---VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  +V  D    NV +Y  +I+GYCK + +++A  L E M  Q L PNT TY +LI+G C
Sbjct: 338 FDTMVHKDCVA-NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG  + A  L   M   G  P++  Y  + D LCK   + +A  LLK         D  
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            YT +L    +  E + A  LF  +   GL P++  Y  +I   C+Q  + E+ K F E 
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   TY  +  G+LR+      ++  + M   G + D ++   L+ G+     L
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGL 575

Query: 559 DEACQ 563
           D++ +
Sbjct: 576 DQSVK 580



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 8/396 (2%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L  +M   G  P+VYT  ++I+ LC     + AF    K+++   ++P+  T+T +I 
Sbjct: 90  LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL-GHQPDATTFTTLIR 148

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G C E K+  A  L ++M  +G  PN  TY +LI G CKVGN   A  L+  M +  C P
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 208

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  ++ +ID LCK  +V EA+ +  +   + +  + +TY  L+    K  E K    L 
Sbjct: 209 NVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM 268

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV + + PD+    T++ A C++  + E+       I  G+ P   TY +++ G+   
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  AVK F  M    C  + I+Y  LI+G CK   +D+A   +E M  + ++P  VT 
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL +  C  G    A+ +   +  +  I    T  TL   LC  + +  A      + G
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 638 KDQNVD-RVSLAALKNACYES---NKYALFSDLSQR 669
            + + D ++    L   C      +   LFS+LS +
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 138/310 (44%), Gaps = 4/310 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +V +  + G + E   +V  M + G+     T N ++   C    V+ A +VFD M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            +   A+  SY  ++  YC++  V +A      M  +    +  T   LI   C     G
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC---HVG 399

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A  L  EMV +G  P++ T+  L D LCK    +KA  L LK +   N+ P++  Y
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL-LKAIEGSNWDPDIQIY 458

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T ++ G C+  ++  A  L   +  +GL PN  TY  +I+G CK G    A  L   M K
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC+PN   YN I  G  +        ELL++   R    D  T T+L+         + 
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 578

Query: 456 ALGLFCRMVK 465
              + C+ V+
Sbjct: 579 VKQILCKYVQ 588



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 38/249 (15%)

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA     +   ++     + +  LL+   K       L L  +M   G+ PD++    
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I + C   ++  +     + +  G  P   T+T++I G   +G I  A+  F +M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 538 CAPDNITYGALISG-----------------------------------LCKQSKLDEAC 562
             P+ +TYG LI+G                                   LCK  ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKL 619
             +  MI KGISP  VT  +L +  CK  +      ++ E +D K+   + T+NT++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 620 CSEKRVGMA 628
           C E  V  A
Sbjct: 291 CKEGMVAEA 299



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N++   ++   ++      G L++   +   +++ GL     T N ++   C+ GL
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  A ++F EM   G   +  +Y L+   + R          L  ML RG  +D +T TL
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 264 LITAFCDKGFRGSIKQ 279
           L+    D G   S+KQ
Sbjct: 566 LVGMLSDDGLDQSVKQ 581


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 4/345 (1%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +L+  FC       +  A   L +M++ G +P++ T   L++G C+      A  +F
Sbjct: 118 TCNILLNCFCRCS---QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++V    YKPNV  Y  +I G CK ++++ A  LL RM++ G+ P+  TY SLI G C 
Sbjct: 175 DQMV-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G +  A  ++  M K    P+++ +NA+ID   K+GRV EA E  ++  +R L  D +T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y++L+      +   +A  +F  MV  G  PD+  Y+ LI  +C+ KK++   K F E  
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+     TYT +I GY R G ++ A + F+RM   G  P+ ITY  L+ GLC   K++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           +A      M   G+    VT   +    CK G+ A A  I  SL+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 178/349 (51%), Gaps = 4/349 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N+ T  +L++  C+      A     K+++   ++P++ T+ ++++G+
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGF 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+ +++  A  + ++M   G  PN   Y ++I G CK    + A DL++ M K+G  P++
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN++I GLC  GR  +A  ++    +RE+  D  T+  L+   +K+    +A   +  
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++  L+PDI  Y+ LI   C   ++ E+E+ F   ++ G FP   TY+ +I GY +   
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +   +K F  M+Q G   + +TY  LI G C+  KL+ A + +  M+  G+ P  +T   
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           L +  C  G    A++IL  + K      I T N +IR +C    V  A
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           ++++M   G+  +  +  +++  +CR  +++ A  +L  M+  G      T   L+  FC
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            +G R  +  A  + ++MV  G+KPNV  +  +IDGLCK    + A  L L  +  D   
Sbjct: 163 -RGDR--VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL-LNRMEKDGIG 218

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V TY ++ISG C   + + A  ++  M ++ + P+  T+ +LI    K G    A + 
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +    P+I  Y+ +I GLC   R+ EA E+      +    D +TY+IL++ + K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + +  + LFC M + G+  +   YT LI  +CR  K+  +E+ F+  +  G+ P   T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +G I  A+     M + G   D +TY  +I G+CK  ++ +A   Y S+ 
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            +G+ P   T  T+     K+G
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKG 480



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 4/400 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   G+P    T N ++   C    +  A     +M   G      ++  ++  +CR  
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           RV +A      M+  G   +      +I   C       +  A +LL  M + G  P+V 
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK---QVDNALDLLNRMEKDGIGPDVV 222

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI GLC  G    A R+   + + + Y P+V T+ A+I    KE +++ AE   E 
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + L P+  TY+ LIYG C     + A ++   M  +GC P++  Y+ +I+G CK  +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V+   +L  +  QR +  + +TYTIL+  + +  +   A  +F RMV  G++P+I  Y  
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+   C   K++++     +    G+     TY  +I G  + G ++ A   +  +N  G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             PD  TY  ++ GL K+    EA   +  M   GI P E
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 4/327 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + +  LF  +V+     P++  ++ ++S   K +K +    L E+M+  G+  N  T   
Sbjct: 63  DDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+   C+      A   +  M K G  P+I  + ++++G C+  RV +A  +  +     
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + + Y  ++    K  +   AL L  RM K G+ PD+  Y +LI+  C   +  ++ 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +         ++P   T+ ++I   +++G +S A ++++ M +    PD +TY  LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
           C  S+LDEA + +  M+ KG  P  VT   L   YCK       M +   + ++  +R  
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 611 -TVNTLIRKLCSEKRVGMAALFFHKLL 636
            T   LI+  C   ++ +A   F +++
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMV 388



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 3/234 (1%)

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
           F R   ++   Y  +L   ++  +   +L LF  MV+    P I  ++ L++A  + KK 
Sbjct: 38  FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
                 +++    G+     T   ++  + R   +S A+ +  +M ++G  P  +T+G+L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           ++G C+  ++ +A   ++ M+G G  P  V   T+    CK      A+ +L  ++K   
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217

Query: 609 ---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              + T N+LI  LCS  R   A      +  ++   D  +  AL +AC +  +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 215/475 (45%), Gaps = 26/475 (5%)

Query: 138 VCATSLISN----GNFERAHEVMQ----------------CMVSSFAEIGRLKEGFSMVI 177
           VC  +L+S     G FE+A +V +                 M+    ++GR KE   +  
Sbjct: 229 VCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWS 288

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            M  N     T T   ++   C  G V+ A  V+ +M   G+  D S Y  ++  +C +G
Sbjct: 289 RMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG 348

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNV 296
           R  EA ++  +    G I    T  ++     D G    + +A ELL+++       P+ 
Sbjct: 349 RTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGM---VSEATELLKQLENDASCSPDK 404

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T   LI GLC+ G+  +AF + L+  R+   + +V +Y++MI+ +CK+ + + A  + +
Sbjct: 405 VTFGTLIHGLCENGYANRAFEI-LEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYK 463

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M + G  PN++ Y +LI G C+V     A  +   M   GC P I  YN +IDGLCK  
Sbjct: 464 NMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAE 523

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           + QEA  L K+  +R  + D  TY  L+    +  +   AL ++  ++ AGL  D+  + 
Sbjct: 524 KYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHN 583

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI   C   K+ E+   + E       P   TY +++ G+   G+I  A   +  +   
Sbjct: 584 ILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDN 643

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           G  PD +TY   I GLC  ++  E       ++  GI P  +T   L     K G
Sbjct: 644 GLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 4/405 (0%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+LG  + A EV+  M A    AD  +Y +++   CR G V  A R  S M+  G +LD 
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           +    LI  FC+ G  G   +A++  +     G +  + T+ ++  GL   G   +A  L
Sbjct: 335 SVYNSLIKGFCEVGRTG---EAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATEL 390

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             +L    +  P+  T+  +I G C+    NRA  +LE  +  G   +  +Y+S+I   C
Sbjct: 391 LKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFC 450

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A ++   M K+GC PN + YNA+I+G C+  ++ +A ++  +          I
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L+    K  + ++A  L   M++ G  PDI  Y +LI   CR KK+  + + + E 
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + AGL      +  +I G    G +  A   +  M +  C+P+ +TY  L+ G  +   +
Sbjct: 571 LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           D+A   + +++  G+ P  VT  T     C    +   +++L  +
Sbjct: 631 DKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV 675



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 226/523 (43%), Gaps = 80/523 (15%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G V+ A  +F  +  RGV  D  +Y  ++    +  ++  A   L  M
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219

Query: 250 LDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLC 307
            + G   D      L++  C   FR G  ++A ++ E++VR  G  PN+ T+ V++DGLC
Sbjct: 220 PNYGVQADAVCYNALLSG-C---FRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G  ++A  ++ +++ ++N++ +  TY  +I G C+   ++ A  +   M + GL+ + 
Sbjct: 276 KLGRFKEAGEVWSRMM-ANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEG------------------------------ 397
           + Y SLI G C+VG    A+   D  G  G                              
Sbjct: 335 SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394

Query: 398 -----CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
                C+P+   +  +I GLC+ G    A+E+L+ A     + D  +Y+ +++   K   
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
           T  A  ++  MVK G  P+ H Y  LI  FCR  K+ ++ K + E  + G  PT  TY +
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  +      A    + M + G  PD  TY +LI GLC+  K+D A + ++ ++  G
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMII-------------------------LESLDK-- 605
           +    +    L +  C  G    A  I                         + S+DK  
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAA 634

Query: 606 KLW-----------IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            LW           I T NT I+ LCS  R     L  +++L 
Sbjct: 635 SLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 21/293 (7%)

Query: 143 LISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           L  NG   RA E+++                M++ F + GR  +   +   M  +G    
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           +   N ++   C +  +  A +++ EM + G C    +Y  ++   C+  +  EA     
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 248 AMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
            ML+RG   D  T   LI   C DK     +  A  + +E++  G + +V  H +LI GL
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDK----KVDVALRIWDEILDAGLQVDVMVHNILIHGL 589

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G  ++AF ++L++ +  N  PN+ TY  ++ G+ +   +++A  L   + + GL P+
Sbjct: 590 CSAGKVDEAFCIYLEM-KEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             TY + I G C          L++ +   G  P +  ++ ++  + K G +Q
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-----PTKETYTSMICGYLRDG 521
           G NP + ++ TL+ AF R ++  +++ FF  +++ G F     P  +TY  ++      G
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFA-SLSHGAFGRRIAPNLQTYNIILRSLCARG 172

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           ++  AV  F  + + G APD +TY  L+SGL K  +LD A    + M   G+    V   
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW----IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            L     + G    AM + E L +       + T   ++  LC   R   A   + +++ 
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292

Query: 638 KDQNVDRVSLAAL 650
            +   D V+   L
Sbjct: 293 NNHQADTVTYGIL 305


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 11/487 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G   + G          EM  R +C D +++ +++   C  G   ++   +  M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   ++  +C KG     K A ELL+ M  KG   +V T+ +LI  LC+ 
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKG---RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               K + L L+ +R     PN  TY  +I+G+  E K+  A  LL  M   GL PN  T
Sbjct: 277 NRIAKGY-LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI GH   GNF+ A  +  +M  +G TP+  +Y  ++DGLCK      A     +  
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +   +ITYT ++    K     +A+ L   M K G++PDI  Y+ LI  FC+  + K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++        GL P    Y+++I    R G +  A++ ++ M   G   D+ T+  L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---K 606
           + LCK  K+ EA +F   M   GI P  V+   L   Y   G+   A  + + + K    
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----L 662
               T  +L++ LC    +  A  F   L      VD V    L  A  +S   A    L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635

Query: 663 FSDLSQR 669
           F ++ QR
Sbjct: 636 FGEMVQR 642



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 14/509 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++      G  KE   M   M   GL     +   ++   C+    + A   + 
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   GVC    +Y  M+   C+ G + EA   L+ M   G   D  T + LI  FC  G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                K A E++  + R G  PN   ++ LI   C+ G  ++A R++  ++   + + + 
Sbjct: 453 ---RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +++  CK  K+  AE  +  M   G+LPNT ++  LI G+   G   +A+ + D 
Sbjct: 510 -TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K G  P  + Y +++ GLCK G ++EA + LK         D + Y  LL+   K   
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYT 511
             +A+ LF  MV+  + PD + YT+LI+  CR+ K   +  F +EA   G + P K  YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             + G  + G   + + + ++M+ +G  PD +T  A+I G  +  K+++       M  +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILES------LDKKLWIRTVNTLIRKLCSEKRV 625
              P   T   L + Y K+ D +T+ ++  S      L  KL   T ++L+  +C    +
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL---TCHSLVLGICESNML 805

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +        + +   VDR +   L + C
Sbjct: 806 EIGLKILKAFICRGVEVDRYTFNMLISKC 834



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 220/471 (46%), Gaps = 19/471 (4%)

Query: 143 LISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLI 187
           L + G+FE++  +MQ M  S               + + GR K    ++  M + G+   
Sbjct: 203 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 262

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C    +     +  +M  R +  +  +Y  ++  +   G+V  A + L+
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ML  G   ++ T   LI     +G   + K+A ++   M  KG  P+  ++ VL+DGLC
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEG---NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K    + A   ++++ R+      + TYT MI G CK   ++ A +LL  M + G+ P+ 
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY++LI G CKVG F+ A +++  + + G +PN   Y+ +I   C+ G ++EA  + + 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D  T+ +L++   K  +  +A      M   G+ P+  ++  LI  +    +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
             ++   F E    G  PT  TY S++ G  + G++  A K+ + ++ +  A D + Y  
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           L++ +CK   L +A   +  M+ + I P   T  +L    C++G +  A++
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 230/526 (43%), Gaps = 43/526 (8%)

Query: 151  RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
            R H     +V+S  + G++ E    +  MT++G+   T + + ++      G    A  V
Sbjct: 506  RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565

Query: 211  FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            FDEM   G      +Y  ++   C+ G + EA+++L ++    A +D      L+TA C 
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----- 325
             G   ++ +A  L  EMV++   P+ YT+T LI GLC+KG T  A  LF K   +     
Sbjct: 626  SG---NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVL 681

Query: 326  -----------------------------DN--YKPNVHTYTAMISGYCKEEKMNRAEML 354
                                         DN  + P++ T  AMI GY +  K+ +   L
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 355  LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            L  M  Q   PN  TY  L++G+ K  +   ++ L   +   G  P+    ++++ G+C+
Sbjct: 742  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801

Query: 415  KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
               ++   ++LK    R ++ D+ T+ +L+S+     E   A  L   M   G++ D   
Sbjct: 802  SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861

Query: 475  YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
               +++   R  + +ES     E    G+ P    Y  +I G  R G+I +A    + M 
Sbjct: 862  CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921

Query: 535  QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                 P N+   A++  L K  K DEA      M+   + P   +  TL +  CK G+  
Sbjct: 922  AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981

Query: 595  TAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             A+   +++ +   KL + + N LI  LC++  + +A   + ++ G
Sbjct: 982  EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 6/375 (1%)

Query: 145  SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
            + GN      +  C V    + G+ K G     +M N G      T N ++     +G +
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 205  EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
            E   ++  EM  +    + ++Y +++  Y +   V+ +     +++  G + D  T   L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 265  ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
            +   C+      ++   ++L+  + +G + + YT  +LI   C  G    AF L +K++ 
Sbjct: 796  VLGICESNM---LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL-VKVMT 851

Query: 325  SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            S     +  T  AM+S   +  +   + M+L  M +QG+ P +  Y  LI G C+VG+ +
Sbjct: 852  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 385  RAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A+ +  +++  + C PN+ A +A++  L K G+  EA  LL+   + +L     ++T L
Sbjct: 912  TAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 444  LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            +    K     +AL L   M   GL  D+ +Y  LI   C +  M  + + ++E    G 
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030

Query: 504  FPTKETYTSMICGYL 518
                 TY ++I G L
Sbjct: 1031 LANATTYKALIRGLL 1045



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 198/540 (36%), Gaps = 121/540 (22%)

Query: 131  HFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSM 175
            HF   + V  TSL   G    A E M+CM S                +   G   + FS+
Sbjct: 508  HFT--FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565

Query: 176  VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
              EMT  G      T   ++   C+ G +  AE+    + A     D   Y  ++ A C+
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 236  MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------FRGSI----- 277
             G + +A      M+ R  + D+ T T LI+  C KG              RG++     
Sbjct: 626  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685

Query: 278  ---------------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                           K      E+M   G  P++ T   +IDG  + G  EK   L L  
Sbjct: 686  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL-LPE 744

Query: 323  VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT--------------- 367
            + + N  PN+ TY  ++ GY K + ++ + +L   +   G+LP+                
Sbjct: 745  MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 368  --------------------NTYTSLIYGHCKVGNFERAYDLMDLM-------------- 393
                                 T+  LI   C  G    A+DL+ +M              
Sbjct: 805  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 394  ---------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
                                  K+G +P    Y  +I+GLC+ G ++ A+ + ++    +
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 433  LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            +    +  + ++    K  +  +A  L   M+K  L P I ++TTL+   C+   + E+ 
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 493  KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            +        GL     +Y  +I G    G+++ A + ++ M   G   +  TY ALI GL
Sbjct: 985  ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 5/364 (1%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G +   F   +   R  N  P+V  Y  +I  Y +E  +  +  +   M   G  P+  T
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT 160

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             +++    K G     +  +  M K    P++  +N +I+ LC +G  +++  L++K  
Sbjct: 161 CNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME 220

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +       +TY  +L  + K+   K A+ L   M   G++ D+  Y  LI   CR  ++ 
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +     ++     + P + TY ++I G+  +G +  A +    M   G +P+++T+ ALI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
            G   +    EA + +  M  KG++P EV+   L    CK  +   A      + +    
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           +   T   +I  LC    +  A +  +++     + D V+ +AL N   +  ++    ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 667 SQRI 670
             RI
Sbjct: 461 VCRI 464



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 14/344 (4%)

Query: 75   QQFHLRSSPPRLNLQIDIDSLTH----EQAITVVASLANEAGSMVALSFFYWAIGFAKFR 130
            Q  +L  +P  +     ID  +     E+   ++  + N+ G     ++     G++K +
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 131  HFMRLYIVCATSLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
                 +++   S+I NG      + + C  +V    E   L+ G  ++      G+ +  
Sbjct: 769  DVSTSFLL-YRSIILNGILP---DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824

Query: 189  STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
             T N ++   C  G + +A ++   M + G+  D  +   MV    R  R  E+   L  
Sbjct: 825  YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884

Query: 249  MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            M  +G   ++     LI   C  G    IK AF + EEM+     P     + ++  L K
Sbjct: 885  MSKQGISPESRKYIGLINGLCRVG---DIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941

Query: 309  KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
             G  ++A  L L+ +      P + ++T ++   CK   +  A  L   M   GL  +  
Sbjct: 942  CGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000

Query: 369  TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            +Y  LI G C  G+   A++L + M  +G   N   Y A+I GL
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 227/471 (48%), Gaps = 26/471 (5%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  +   G+     S+ +++   C +G + EA    S M
Sbjct: 266 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D+ T  +L   F      G I  A+E++ +M+ KG  P+V T+T+L+ G C+ 
Sbjct: 326 NKHGVEPDSVTYNILAKGF---HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 382

Query: 310 GWTEKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           G  +    L LK + S  ++ N +   + M+SG CK  +++ A  L  +MK  GL P+  
Sbjct: 383 GNIDMGLVL-LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+ +I+G CK+G F+ A  L D M  +   PN   + A++ GLC+KG + EA  LL   
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  D + Y I++  + K    ++AL LF  +++ G+ P +  + +LI  +C+ + +
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+ K        GL P+  +YT+++  Y   GN  S  +  + M   G  P N+TY  +
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621

Query: 549 ISGLCK-----------QSKLDEAC-QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             GLC+           + ++ E C Q    M  +GI P ++T  T+    C+    + A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681

Query: 597 MIILE-----SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            + LE     +LD      T N LI  LC    +  A  F + L  ++QNV
Sbjct: 682 FVFLEIMKSRNLDAS--SATYNILIDSLCVYGYIRKADSFIYSL--QEQNV 728



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 24/512 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + ++G +    S    +   GL     + N ++   C +G +  A E+  +M   G
Sbjct: 270 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 329

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y ++   +  +G ++ A   +  MLD+G   D  T T+L+   C     G+I 
Sbjct: 330 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ---LGNID 386

Query: 279 QAFELLEEMVRKGWKPN-VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
               LL++M+ +G++ N +   +V++ GLCK G  ++A  LF ++ ++D   P++  Y+ 
Sbjct: 387 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSI 445

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K + A  L + M ++ +LPN+ T+ +L+ G C+ G    A  L+D +   G
Sbjct: 446 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 505

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            T +I  YN +IDG  K G ++EA EL K   +  +     T+  L+  + K     +A 
Sbjct: 506 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 565

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG- 516
            +   +   GL P + +YTTL+ A+      K  ++  +E    G+ PT  TY+ +  G 
Sbjct: 566 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 625

Query: 517 -----------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
                       LR+       +  + M   G  PD ITY  +I  LC+   L  A  F 
Sbjct: 626 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 685

Query: 566 ESMIGKGISPCEVTRVTL-----AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           E M  + +     T   L      Y Y ++ DS   +  L+  +  L      TLI+  C
Sbjct: 686 EIMKSRNLDASSATYNILIDSLCVYGYIRKADS--FIYSLQEQNVSLSKFAYTTLIKAHC 743

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +    MA   FH+LL +  NV     +A+ N
Sbjct: 744 VKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 775



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 216/433 (49%), Gaps = 25/433 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
           ++G +  G  ++ +M + G  L  S +   V ++  C+ G ++ A  +F++M A G+  D
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFEL-NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 439

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y +++   C++G+   A      M D+  + ++ T   L+   C KG    + +A  
Sbjct: 440 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM---LLEARS 496

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL+ ++  G   ++  + ++IDG  K G  E+A  LF K+V      P+V T+ ++I GY
Sbjct: 497 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGY 555

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + +  A  +L+ +K  GL P+  +YT+L+  +   GN +   +L   M  EG  P  
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 615

Query: 403 YAYNAIIDGLCKKGRVQEAYELLK-KAFQ------RELQA-----DKITYTILLSEHLKQ 450
             Y+ I  GLC+  + +    +L+ + F+      R++++     D+ITY  ++ ++L +
Sbjct: 616 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII-QYLCR 674

Query: 451 AETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
            +      +F  ++K+  L+     Y  LI + C    +++++ F        +  +K  
Sbjct: 675 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 734

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I  +   G+   AVK F ++   G       Y A+I+ LC++  ++E+  F+  M+
Sbjct: 735 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 794

Query: 570 GKGISP----CEV 578
            +GISP    CEV
Sbjct: 795 SQGISPDLDICEV 807



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 37/343 (10%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N +T++ ++DGLC++   E A  LFL+     +  P+V ++ +++SGYCK   ++ A+  
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 286

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              + + GL+P+  ++  LI G C VG+   A +L   M K G  P+   YN +  G   
Sbjct: 287 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
            G +  A+E+++    + L  D ITYTIL                               
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406

Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                LS   K     +AL LF +M   GL+PD+ AY+ +I   C+  K   +   + E 
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   T+ +++ G  + G +  A      +   G   D + Y  +I G  K   +
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +EA + ++ +I  GI+P   T  +L Y YCK  + A A  IL+
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 569



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 1/274 (0%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N HTY+ ++ G C+++K+  A + L   + + + P+  ++ S++ G+CK+G  + A    
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + K G  P++Y++N +I+GLC  G + EA EL     +  ++ D +TY IL       
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKET 509
                A  +   M+  GL+PD+  YT L+   C+   +       ++ ++ G    +   
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + M+ G  + G I  A+  F +M   G +PD + Y  +I GLCK  K D A   Y+ M 
Sbjct: 408 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            K I P   T   L    C++G    A  +L+SL
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 46/331 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L++MK+Q L  +T +Y S++Y         R  D M  + KE    N + Y+ ++DGLC
Sbjct: 188 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 240

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++ ++++A   L+ +  +++    +++  ++S + K      A   FC ++K GL P ++
Sbjct: 241 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 300

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++  LI   C    + E+ +   +    G+ P   TY  +  G+   G IS A +  + M
Sbjct: 301 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 360

Query: 534 NQIGCAPDNITY------------------------------------GALISGLCKQSK 557
              G +PD ITY                                      ++SGLCK  +
Sbjct: 361 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 420

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI--RTVNT 614
           +DEA   +  M   G+SP  V    + +  CK G    A+ + + + DK++    RT   
Sbjct: 421 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 480

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           L+  LC +  +  A      L+   + +D V
Sbjct: 481 LLLGLCQKGMLLEARSLLDSLISSGETLDIV 511


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 226/469 (48%), Gaps = 22/469 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  +   G+     S+ +++   C +G + EA    S M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D+ T  +L   F      G I  A+E++ +M+ KG  P+V T+T+L+ G C+ 
Sbjct: 284 NKHGVEPDSVTYNILAKGF---HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340

Query: 310 GWTEKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           G  +    L LK + S  ++ N +   + M+SG CK  +++ A  L  +MK  GL P+  
Sbjct: 341 GNIDMGLVL-LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+ +I+G CK+G F+ A  L D M  +   PN   + A++ GLC+KG + EA  LL   
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  D + Y I++  + K    ++AL LF  +++ G+ P +  + +LI  +C+ + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+ K        GL P+  +YT+++  Y   GN  S  +  + M   G  P N+TY  +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 549 ISGLCK-----------QSKLDEAC-QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             GLC+           + ++ E C Q    M  +GI P ++T  T+    C+    + A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            + LE +  +       T N LI  LC    +  A  F + L  ++QNV
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL--QEQNV 686



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 24/512 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + ++G +    S    +   GL     + N ++   C +G +  A E+  +M   G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y ++   +  +G ++ A   +  MLD+G   D  T T+L+   C     G+I 
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ---LGNID 344

Query: 279 QAFELLEEMVRKGWKPN-VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
               LL++M+ +G++ N +   +V++ GLCK G  ++A  LF ++ ++D   P++  Y+ 
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSI 403

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K + A  L + M ++ +LPN+ T+ +L+ G C+ G    A  L+D +   G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            T +I  YN +IDG  K G ++EA EL K   +  +     T+  L+  + K     +A 
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG- 516
            +   +   GL P + +YTTL+ A+      K  ++  +E    G+ PT  TY+ +  G 
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583

Query: 517 -----------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
                       LR+       +  + M   G  PD ITY  +I  LC+   L  A  F 
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643

Query: 566 ESMIGKGISPCEVTRVTL-----AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           E M  + +     T   L      Y Y ++ DS   +  L+  +  L      TLI+  C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADS--FIYSLQEQNVSLSKFAYTTLIKAHC 701

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +    MA   FH+LL +  NV     +A+ N
Sbjct: 702 VKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 37/343 (10%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N +T++ ++DGLC++   E A  LFL+     +  P+V ++ +++SGYCK   ++ A+  
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              + + GL+P+  ++  LI G C VG+   A +L   M K G  P+   YN +  G   
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
            G +  A+E+++    + L  D ITYTIL                               
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364

Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                LS   K     +AL LF +M   GL+PD+ AY+ +I   C+  K   +   + E 
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   T+ +++ G  + G +  A      +   G   D + Y  +I G  K   +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +EA + ++ +I  GI+P   T  +L Y YCK  + A A  IL+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 200/406 (49%), Gaps = 21/406 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
           ++G +  G  ++ +M + G  L  S +   V ++  C+ G ++ A  +F++M A G+  D
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFEL-NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y +++   C++G+   A      M D+  + ++ T   L+   C KG    + +A  
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM---LLEARS 454

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL+ ++  G   ++  + ++IDG  K G  E+A  LF K+V      P+V T+ ++I GY
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGY 513

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + +  A  +L+ +K  GL P+  +YT+L+  +   GN +   +L   M  EG  P  
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573

Query: 403 YAYNAIIDGLCKKGRVQEAYELLK-KAFQ------RELQA-----DKITYTILLSEHLKQ 450
             Y+ I  GLC+  + +    +L+ + F+      R++++     D+ITY  ++ ++L +
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII-QYLCR 632

Query: 451 AETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
            +      +F  ++K+  L+     Y  LI + C    +++++ F        +  +K  
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           YT++I  +   G+   AVK F ++   G       Y A+I+ LC++
Sbjct: 693 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 1/274 (0%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N HTY+ ++ G C+++K+  A + L   + + + P+  ++ S++ G+CK+G  + A    
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + K G  P++Y++N +I+GLC  G + EA EL     +  ++ D +TY IL       
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKET 509
                A  +   M+  GL+PD+  YT L+   C+   +       ++ ++ G    +   
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + M+ G  + G I  A+  F +M   G +PD + Y  +I GLCK  K D A   Y+ M 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            K I P   T   L    C++G    A  +L+SL
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 20/392 (5%)

Query: 137 IVCATSLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV 194
           +V    ++S G FE  + ++ C  M+S   + GR+ E  S+  +M  +GL       + V
Sbjct: 347 LVLLKDMLSRG-FE-LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           +   C+LG  + A  ++DEMC + +  ++ ++  +++  C+ G + EA   L +++  G 
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
            LD     ++I  +   G    I++A EL + ++  G  P+V T   LI G CK     +
Sbjct: 465 TLDIVLYNIVIDGYAKSG---CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A R  L +++     P+V +YT ++  Y         + L   MK +G+ P   TY+ + 
Sbjct: 522 A-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580

Query: 375 YGHCKVGN------------FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            G C+               FE+    +  M  EG  P+   YN II  LC+   +  A+
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             L+    R L A   TY IL+         ++A      + +  ++    AYTTLI A 
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           C +   + + K F + +  G   +   Y+++I
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 46/331 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L++MK+Q L  +T +Y S++Y         R  D M  + KE    N + Y+ ++DGLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 198

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++ ++++A   L+ +  +++    +++  ++S + K      A   FC ++K GL P ++
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++  LI   C    + E+ +   +    G+ P   TY  +  G+   G IS A +  + M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318

Query: 534 NQIGCAPDNITY------------------------------------GALISGLCKQSK 557
              G +PD ITY                                      ++SGLCK  +
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI--RTVNT 614
           +DEA   +  M   G+SP  V    + +  CK G    A+ + + + DK++    RT   
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           L+  LC +  +  A      L+   + +D V
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIV 469


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 194/358 (54%), Gaps = 6/358 (1%)

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M+  G + +     +LI A C  G    +++A +LL EM  +   P+++T+  LI   CK
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSG---DVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           KG   +A  +  ++ R     P++ TY ++I G+C+E +M  A  L   +   G  PN  
Sbjct: 245 KGMHYEALGIQDRMERG-GVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHV 301

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TYT+LI G+C+V + E A  L ++M  EG  P +  YN+I+  LC++G++++A  LL + 
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +R+++ D +T   L++ + K  +   A+ +  +M++AGL PD   +  LI  FC+  ++
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
             +++F  E + AG  P+  TY+ ++  Y    N  + ++    +++ G   D   Y AL
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           I  LCK  K++ A + +  M GKG+    V   +LAY Y K G +  A  +L+ +DK+
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 201/395 (50%), Gaps = 12/395 (3%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           + A ++ E M   G+KP+++  TVL++ L K   T   ++++ K+VR     PN+H +  
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV-GVVPNIHIFNV 202

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   CK   + +AE LL  M+ + + P+  TY +LI  +CK G    A  + D M + G
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA---DKITYTILLSEHLKQAETK 454
            +P+I  YN++I G C++GR++EA  L      RE+     + +TYT L+  + +  + +
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLF-----REINGATPNHVTYTTLIDGYCRVNDLE 317

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +AL L   M   GL+P +  Y +++   C + K+K++ +   E     + P   T  ++I
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             Y + G++ SA+K  ++M + G  PD  T+ ALI G CK  ++D A +F   M+  G S
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P   T   L   Y  Q +    + + + L +K   + I     LIR+LC   ++  A   
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERI 497

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           F  + GK    D V   +L  A +++ K    SD+
Sbjct: 498 FTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 532



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 6/334 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C+ G+   A  + D M   GV  D  +Y  ++  +CR GR+ EA R    +
Sbjct: 234 TYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI 293

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              GA  ++ T T LI  +C       +++A  L E M  +G  P V T+  ++  LC++
Sbjct: 294 --NGATPNHVTYTTLIDGYCRVN---DLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 348

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  + A RL L  +     +P+  T   +I+ YCK   M  A  + ++M E GL P+  T
Sbjct: 349 GKIKDANRL-LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFT 407

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI+G CK+   + A + +  M   G +P+   Y+ ++D    +   +    L  +  
Sbjct: 408 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 467

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ L  D   Y  L+    K  + + A  +F  M   G+  D   YT+L  A+ +  K  
Sbjct: 468 RKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAI 527

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            +     E     L  T + Y      Y  DG+I
Sbjct: 528 AASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 219/492 (44%), Gaps = 71/492 (14%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
           S+ N VV   C+LG V++A ++   M   G   D  SY  ++  +CR G +  A   L +
Sbjct: 57  SSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLES 116

Query: 249 ---------------------------MLDR-----GAIL-----DNATLTLLITAFCDK 271
                                      MLD      G +L     +  T +  I  FC  
Sbjct: 117 LRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKS 176

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    +K A +    M R    PNV T T LIDG CK G  E    L+ ++ R      N
Sbjct: 177 G---ELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEM-RRVRMSLN 232

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TYTA+I G+CK+ +M RA  +  RM E  + PN+  YT++I G  + G+ + A   + 
Sbjct: 233 VVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLA 292

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G   +I AY  II GLC  G+++EA E+++   + +L  D + +T +++ + K  
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSG 352

Query: 452 ETKQALGLFCRMVKAGLNPDIHA------------------------------YTTLIAA 481
             K A+ ++ ++++ G  PD+ A                              YT LI A
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDA 412

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+++   E E+ F +   AGL P K  YTS I G  + GN+  A K   +M Q G   D
Sbjct: 413 LCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELD 472

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
              Y  LI GL  +  + EA Q ++ M+  G+ P       L   Y K+G+  TA  +L 
Sbjct: 473 LFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLL 532

Query: 602 SLDKKLWIRTVN 613
            +  +   R V+
Sbjct: 533 DMQTRGLARAVS 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 10/356 (2%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           + +RG     SS+  +V   C++G+V  A   + +M   G   D  +   LI   C  G 
Sbjct: 47  LVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNG- 105

Query: 274 RGSIKQAFELLEEMVRKGW----KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              I+ A  +LE + R  +    KP++ +   L +G  K    ++ F     +++     
Sbjct: 106 --DIRSACLVLESL-RASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC--CS 160

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV TY+  I  +CK  ++  A      MK   L PN  T+T LI G+CK G+ E    L
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +   + N+  Y A+IDG CKKG +Q A  +  +  +  ++ + + YT +++   +
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQ 280

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           + ++  A+    +M+  G+  DI AY  +I+  C   K+KE+ +  ++     L P    
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMI 340

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
           +T+M+  Y + G + +AV  + ++ + G  PD +    +I G+ K  +L EA  ++
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF 396



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 194/441 (43%), Gaps = 23/441 (5%)

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           ++L+ ++ RG     ++   +++  C     G +K A +++  M R G +P+V ++  LI
Sbjct: 42  KFLAYLVSRGYAPHRSSFNSVVSFVCK---LGQVKFAVDIVHSMPRFGCEPDVISYNSLI 98

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNY--KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           DG C+ G    A  +   L  S  +  KP++ ++  + +G+ K       +ML E     
Sbjct: 99  DGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSK------MKMLDEVFVYM 152

Query: 362 GLL-----PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           G++     PN  TY++ I   CK G  + A    + M ++   PN+  +  +IDG CK G
Sbjct: 153 GVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAG 212

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            ++    L ++  +  +  + +TYT L+    K+ E ++A G++ RM++  + P+   YT
Sbjct: 213 DLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYT 272

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           T+I  F ++     + KF  + +  G+      Y  +I G    G +  A +  + M + 
Sbjct: 273 TIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKG 332

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD--SA 594
              PD + +  +++   K  ++  A   Y  +I +G  P  V   T+     K G    A
Sbjct: 333 DLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392

Query: 595 TAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA-LKNA 653
            +    E  +  ++      LI  LC E+        F K+       D+    + +   
Sbjct: 393 ISYFCTEKANDVMY----TVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448

Query: 654 CYESNKYALFSDLSQRIAEGI 674
           C + N    F   ++ + EG+
Sbjct: 449 CKQGNLVDAFKLKTKMVQEGL 469



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 11/311 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G ++    M + M  + +   +     ++    + G  + A +   +M  +G
Sbjct: 239 LIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQG 298

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D ++Y +++   C +G++ EA   +  M     + D    T ++ A+    F+ G +
Sbjct: 299 MRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAY----FKSGRM 354

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K A  +  +++ +G++P+V   + +IDG+ K G   +A   F         K N   YT 
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFC------TEKANDVMYTV 408

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   CKEE     E L  ++ E GL+P+   YTS I G CK GN   A+ L   M +EG
Sbjct: 409 LIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG 468

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              +++AY  +I GL  KG + EA ++  +  +  +  D   + +L+  + K+     A 
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTAS 528

Query: 458 GLFCRMVKAGL 468
            L   M   GL
Sbjct: 529 DLLLDMQTRGL 539



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 50/116 (43%)

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            K+AL    R+ K+   PD       I           S KF    ++ G  P + ++ S
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           ++    + G +  AV     M + GC PD I+Y +LI G C+   +  AC   ES+
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESL 117


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 220/456 (48%), Gaps = 12/456 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  E  +++  M  +G+     T   ++   C+   ++ A E+ DEMC  GV  +   Y 
Sbjct: 138 RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYS 197

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  YCR GR  +  +    M  RG   D    T LI   C +G  G   +A ++ + M
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG---KAAKVKDMM 254

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V++G +PNV T+ VLI+ LCK+G   +A  L  K +      P+V TY  +I+G     +
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLR-KEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 348 MNRAEMLLERMKEQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           M+ A   LE M +   +  P+  T+ S+I+G CK+G   +A  + ++M + GC  N+  Y
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I G  +  +V+ A  L+ +     L+ D  TY+IL++   K  E  +A    C M +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNIS 524
            G+  ++  Y  L+AA C+Q  M+ +   F E     GL      Y++MI G  + G++ 
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAI--AYSTMIHGACKSGDMK 491

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +  +  Q M   G APD +TY  LI+   K   L+EA +  + M   G  P      +L 
Sbjct: 492 TVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551

Query: 585 YEYCKQGDSATAMIILESLDKK---LWIRTVNTLIR 617
             Y  +G +   + ++  +  K      + ++T+IR
Sbjct: 552 KGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 215/476 (45%), Gaps = 53/476 (11%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-- 292
           R   VTEA   LSA+ D   + D  +   ++ A C +G    ++QA  LL +M R+    
Sbjct: 63  RGAPVTEACSLLSALPD---VRDAVSYNTVLAALCRRGG-DHLRQARSLLVDMSREAHPA 118

Query: 293 -KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            +PN  ++T ++ GLC    T +A  L L+ +++   + +V TY  +I G C   +++ A
Sbjct: 119 ARPNAVSYTTVMRGLCASRRTGEAVAL-LRSMQASGVRADVVTYGTLIRGLCDASELDAA 177

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             LL+ M   G+ PN   Y+ L+ G+C+ G ++    + + M + G  P++  +  +ID 
Sbjct: 178 LELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDD 237

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LCK+G+  +A ++     QR L+ + +TY +L++   K+   ++AL L   M   G+ PD
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF--PTKETYTSMICGYLRDGNISSAVKY 529
           +  Y TLIA      +M E+  F +E I       P   T+ S+I G  + G ++ AVK 
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 530 FQRMNQIGC-----------------------------------APDNITYGALISGLCK 554
            + M + GC                                    PD+ TY  LI+G  K
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-- 612
             ++D A +F  +M  +GI       + L    C+QG    AM +   +DK   +  +  
Sbjct: 418 MWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAY 477

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQ 668
           +T+I   C    +         +L +    D V+ + L       N YA   DL +
Sbjct: 478 STMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSML------INMYAKLGDLEE 527



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 211/503 (41%), Gaps = 87/503 (17%)

Query: 222 DASSYKLMVVAYCRMG----------------------------------------RVTE 241
           DA SY  ++ A CR G                                        R  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCD------------------------------K 271
           A   L +M   G   D  T   LI   CD                              +
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 272 GF--RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
           G+   G  +   ++ E+M R+G KP+V   T LID LCK+G T KA ++   +V+    +
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR-GLE 260

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV TY  +I+  CKE  +  A  L + M ++G+ P+  TY +LI G   V   + A   
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 390 MDLM--GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           ++ M  G     P++  +N++I GLCK GR+ +A ++ +   +R    + +TY  L+   
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF----QEAITAGL 503
           L+  + K A+ L   +  +GL PD   Y+ LI  F +  ++  +EKF     Q  I A L
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           F     Y  ++    + G +  A+  F  M++  C  D I Y  +I G CK   +    Q
Sbjct: 441 F----HYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQ 495

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
             + M+ +G++P  VT   L   Y K GD   A  +L+ +    ++  V   ++LI+   
Sbjct: 496 LIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYS 555

Query: 621 SEKRVGMAALFFHKLLGKDQNVD 643
           +E +        H++  K+   D
Sbjct: 556 AEGQTDKVLKLIHEMRAKNVAFD 578



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 157/326 (48%), Gaps = 13/326 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV-FDEMCAR 217
           +++S  + G ++E  ++  EM + G+     T N +  IA   G++E  E + F E   +
Sbjct: 269 LINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL--IAGLSGVLEMDEAMSFLEEMIQ 326

Query: 218 G---VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
           G   V  D  ++  ++   C++GR+T+A +    M +RG + +  T   LI  F      
Sbjct: 327 GDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH-- 384

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +K A  L++E+   G +P+ +T+++LI+G  K    ++A + FL  +R    K  +  
Sbjct: 385 -KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK-FLCTMRQRGIKAELFH 442

Query: 335 YTAMISGYCKEEKMNRAEMLLERM-KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           Y  +++  C++  M RA  L   M K  GL  +   Y+++I+G CK G+ +    L+  M
Sbjct: 443 YIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
             EG  P+   Y+ +I+   K G ++EA  +LK+        D   +  L+  +  + +T
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLI 479
            + L L   M    +  D    +T+I
Sbjct: 561 DKVLKLIHEMRAKNVAFDPKIISTII 586


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 198/405 (48%), Gaps = 8/405 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C    V  A  +  +M   G   D  +   +V  +CR  RV++A   +  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++ G   D      +I + C       +  AF+  +E+ RKG +PNV T+T L++GLC  
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTK---RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A RL   +++     PNV TY+A++  + K  K+  A+ L E M    + P+  T
Sbjct: 239 SRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI G C     + A  + DLM  +GC  ++ +YN +I+G CK  RV++  +L ++  
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           QR L ++ +TY  L+    +  +  +A   F +M   G++PDI  Y  L+   C   +++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++   F++     +     TYT++I G  + G +  A   F  ++  G  PD +TY  ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVT----RVTLAYEYCKQ 590
           SGLC +  L E    Y  M  +G+   + T     +TL+ E  K+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T  ++I  FC   F+ S+  A  +L +M++ G++P+  T   L++G C++     A 
Sbjct: 119 DLYTFNIVINCFC-CCFQVSL--ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            L  K+V    YKP++  Y A+I   CK +++N A    + ++ +G+ PN  TYT+L+ G
Sbjct: 176 SLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C    +  A  L+  M K+  TPN+  Y+A++D   K G+V EA EL ++  +  +  D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY+ L++         +A  +F  MV  G   D+ +Y TLI  FC+ K++++  K F+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    GL     TY ++I G+ + G++  A ++F +M+  G +PD  TY  L+ GLC   
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           +L++A   +E M  + +    VT  T+    CK G    A  +  SL  K     I T  
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 614 TLIRKLCSE 622
           T++  LC++
Sbjct: 475 TMMSGLCTK 483



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 206/408 (50%), Gaps = 14/408 (3%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E     +  +V+ F    R+ +  S+V +M   G        N ++   C+   V  A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           + F E+  +G+  +  +Y  +V   C   R ++A R LS M+ +    +  T + L+ AF
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    + +A EL EEMVR    P++ T++ LI+GLC     ++A ++F  L+ S   
Sbjct: 271 VKNG---KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGC 326

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +V +Y  +I+G+CK +++     L   M ++GL+ NT TY +LI G  + G+ ++A +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M   G +P+I+ YN ++ GLC  G +++A  + +   +RE+  D +TYT ++    
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + ++A  LFC +   GL PDI  YTT+++  C +  + E E  + +    GL     
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           T        L DG+I+ + +  ++M   G AP  +    + SG+CK++
Sbjct: 507 T--------LSDGDITLSAELIKKMLSCGYAPSLLK--DIKSGVCKKA 544



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            NR++    +L   +    +  +M   G+  D  ++ +++  +C   +V+ A   L  ML
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   D  T+  L+  FC    R  +  A  L+++MV  G+KP++  +  +ID LCK  
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR---RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               AF  F ++ R    +PNV TYTA+++G C   + + A  LL  M ++ + PN  TY
Sbjct: 205 RVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           ++L+    K G    A +L + M +    P+I  Y+++I+GLC   R+ EA ++      
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +   AD ++Y  L++   K    +  + LF  M + GL  +   Y TLI  F +   + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +++FF +    G+ P   TY  ++ G   +G +  A+  F+ M +     D +TY  +I 
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           G+CK  K++EA   + S+  KG+ P  VT  T+    C +G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 47/366 (12%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNV 332
           +  A +L  +MV+    P++     L+  + K    +    L  K+    +R+D Y    
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY---- 121

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +I+ +C   +++ A  +L +M + G  P+  T  SL+ G C+      A  L+D 
Sbjct: 122 -TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P+I AYNAIID LCK  RV +A++     F +E++                  
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD-----FFKEIE------------------ 217

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
                       + G+ P++  YT L+   C   +  ++ +   + I   + P   TY++
Sbjct: 218 ------------RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++  ++++G +  A + F+ M ++   PD +TY +LI+GLC   ++DEA Q ++ M+ KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
                V+  TL   +CK       M +   + ++  +    T NTLI+       V  A 
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385

Query: 630 LFFHKL 635
            FF ++
Sbjct: 386 EFFSQM 391



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 38/245 (15%)

Query: 447 HLKQAETKQALGLFCRMVKA-----------------------------------GLNPD 471
            L+  +   A+ LF  MVK+                                   G+  D
Sbjct: 60  RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ +  +I  FC   ++  +     + +  G  P + T  S++ G+ R   +S AV    
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M +IG  PD + Y A+I  LCK  ++++A  F++ +  KGI P  VT   L    C   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
             + A  +L  + KK     + T + L+       +V  A   F +++    + D V+ +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 649 ALKNA 653
           +L N 
Sbjct: 300 SLING 304


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 47/508 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+ F +  RL E   +   M   G   P +  T + ++   C+ G V     + +EM  
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLV-TYSVLIDCYCKSGEVGEGLGLLEEMER 213

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+ AD   Y  ++ A+C  G +         ML R    +  T + L+      G  G 
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGL---GRTGR 270

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            ++A E+L++M  +G +P+V  +TVL DGLCK G    A ++ L L+     +P   TY 
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV-LDLMVQKGEEPGTLTYN 329

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +++G CKE++M+ A  ++E M ++G  P+  TY +L+ G C  G    A DL  L+  E
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389

Query: 397 G--CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
                P+++  N +I GLCK+GRV +A  +     +  LQ + +TY  L+  +L   +  
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449

Query: 455 QAL-----------------------------------GLFCRMVKAGLNPDIHAYTTLI 479
           +AL                                   GLFC+M  +G+ P +  Y  L+
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            + CR+  ++++   FQE           ++  +I G L+ G++ SA +    M  +   
Sbjct: 510 TSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLV 569

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD +T+  LI+   K   LDEA   YE M+  G  P  V   +L   Y  +G++   + +
Sbjct: 570 PDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISL 629

Query: 600 LESL-DKKLWI--RTVNTLIRKLCSEKR 624
           L  + DK + +  +  +T++  LC   R
Sbjct: 630 LHQMADKDVVLDSKLTSTILACLCHMSR 657



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 227/497 (45%), Gaps = 41/497 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +  SF         FS++  MT  G  +    LN V+   C  G  + A  +F +M 
Sbjct: 80  LSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK 139

Query: 216 ARGVCA--DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKG 272
               C   D  +Y  +V  +C+  R+ EA     AM   G    N  T ++LI  +C  G
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               + +   LLEEM R+G K +V+ ++ LI   C +G  E    LF +++R     PNV
Sbjct: 200 ---EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRR-KVSPNV 255

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY+ ++ G  +  +   A  +L+ M  +G+ P+   YT L  G CK G    A  ++DL
Sbjct: 256 VTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDL 315

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M ++G  P    YN +++GLCK+ R+ +A+ +++   ++  + D +TY  LL       +
Sbjct: 316 MVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGK 375

Query: 453 TKQALGLFCRMV--KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
             +A+ L+  ++  K  + PD+     LI   C++ ++ ++ +     +  GL     TY
Sbjct: 376 IHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTY 435

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             +I GYL    +  A+K ++   + G +P+++TY  +I+GLCK   L          + 
Sbjct: 436 NFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLS---------VA 486

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
           +G+             +CK  DS     +++           N L+  LC E  +  A  
Sbjct: 487 RGL-------------FCKMKDSGIRPTVID----------YNALMTSLCREDSLEQARS 523

Query: 631 FFHKLLGKDQNVDRVSL 647
            F ++   + NVD VS 
Sbjct: 524 LFQEMRNVNHNVDVVSF 540



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 155/394 (39%), Gaps = 79/394 (20%)

Query: 315 AFRLFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           A  LF + + +D    P+    + +I    K  + +    +  +M    +LP   + ++L
Sbjct: 24  AVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSAL 83

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA------------ 421
                   +   A+ ++ LM K G   N+Y  N ++ G C+ G+  +A            
Sbjct: 84  TESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYD 143

Query: 422 --------YELLKKAFQR------------------ELQADKITYTILLSEHLKQAETKQ 455
                   Y  L   F +                  + + + +TY++L+  + K  E  +
Sbjct: 144 CVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGE 203

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFC-------------------------------- 483
            LGL   M + GL  D+  Y++LI+AFC                                
Sbjct: 204 GLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQ 263

Query: 484 ---RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              R  + +E+ +  ++    G+ P    YT +  G  ++G    A+K    M Q G  P
Sbjct: 264 GLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM--- 597
             +TY  +++GLCK+ ++D+A    E M+ KG  P  VT  TL    C  G    AM   
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383

Query: 598 --IILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
             ++ E    K  + T N LI+ LC E RV  AA
Sbjct: 384 KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAA 417


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 8/422 (1%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  ++  +M   GL  +  T N ++   C  G V  A  + ++M  +G+  D  +Y  +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C+MG    A   LS M +     D    + +I   C  G     +  F    EM+ K
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS---EMLEK 325

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PNV+T+  +IDG C  G    A RL   ++  +   P+V T+ A+IS   KE K+  
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFE 384

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE L + M  + + P+T TY S+IYG CK   F+ A  + DLM     +P++  +N IID
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             C+  RV E  +LL++  +R L A+  TY  L+    +      A  LF  M+  G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D      L+  FC  +K++E+ + F+    + +      Y  +I G  +   +  A   F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             +   G  PD  TY  +ISG C +S + +A   +  M   G  P   T  TL     K 
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 591 GD 592
           G+
Sbjct: 621 GE 622



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 9/403 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   ++G  K   +++ +M    +       + ++   C+ G    A+ +F EM  +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  +C  GR ++A R L  M++R    D  T   LI+A   +G    + 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLF 383

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+ +   P+  T+  +I G CK    + A  +F  L+ S    P+V T+  +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTI 438

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC+ ++++    LL  +  +GL+ NT TY +LI+G C+V N   A DL   M   G 
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N ++ G C+  +++EA EL +     ++  D + Y I++    K ++  +A  
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+  Y  +I+ FC +  + ++   F +    G  P   TY ++I G L
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           + G I  +++    M   G + D  T   +++ L    +LD++
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKS 660



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 224/518 (43%), Gaps = 55/518 (10%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N+V+G+   +   + A  ++ +M  R +  +  S+ +++  +C   +++ +      +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 252 RGAILDNATLTLLITAFC----------------DKGFRGSIKQAFELLEEMVRKGWKPN 295
            G   D  T   L+   C                + GF     +A  L ++MV  G  P 
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----EAVALFDQMVEIGLTPV 225

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V T   LI+GLC +G   +A  L  K+V       +V TY  +++G CK      A  LL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            +M+E  + P+   Y+++I   CK G+   A  L   M ++G  PN++ YN +IDG C  
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL---------------- 459
           GR  +A  LL+   +RE+  D +T+  L+S  +K+ +  +A  L                
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 460 ------FCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                 FC+         M     +PD+  + T+I  +CR K++ E  +  +E    GL 
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
               TY ++I G+    N+++A   FQ M   G  PD IT   L+ G C+  KL+EA + 
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCS 621
           +E +    I    V    + +  CK      A  +  SL     +  ++T N +I   C 
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           +  +  A + FHK+       D  +   L   C ++ +
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 10/325 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR  +   ++ +M    +     T N ++  + + G +  AE++ DEM  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           R +  D  +Y  M+  +C+  R  +A      M D  A  D  T   +I  +C       
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYCRA---KR 447

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +  +LL E+ R+G   N  T+  LI G C+      A  LF +++ S    P+  T  
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCN 506

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+C+ EK+  A  L E ++   +  +T  Y  +I+G CK    + A+DL   +   
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN +I G C K  + +A  L  K      + D  TY  L+   LK  E  ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAA 481
           + L   M   G + D  A+T  + A
Sbjct: 627 IELISEMRSNGFSGD--AFTIKMVA 649



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 31/303 (10%)

Query: 347 KMNRAEMLLERMKEQGL--LPNTNTYT------SLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++N   ++  R+ E+G   LP+    T       L  G     + + A D  D M +   
Sbjct: 43  RLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRP 102

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                  N +I    +  R   A  L +K   R +  +  ++ IL+       +   +L 
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F ++ K G  PD+  + TL+   C + ++ E+   F                    GY+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYM 202

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +     AV  F +M +IG  P  IT+  LI+GLC + ++ EA      M+GKG+    V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  T+    CK GD+ +A+ +L  +++   K  +   + +I +LC +     A   F ++
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 636 LGK 638
           L K
Sbjct: 323 LEK 325


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 248/558 (44%), Gaps = 52/558 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCAR 217
           ++  F  +GRL+ GF+    +  +G  +    +N+++   C+   +  A ++    M   
Sbjct: 100 LIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPEL 159

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD---RGAILDNATLTLLITAFCDKGFR 274
           G   D  SY  ++  +C   R  EA   L  M D   R    +  +   +I  F  +   
Sbjct: 160 GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTE--- 216

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A+ L  EM+ +G +PNV T+T +IDGLCK    ++A  +F +++     KP+  T
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI-DKGVKPDNDT 275

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GY    K      +LE M   GL P+  TY SL+   C  G    A    D M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  PN+  Y  +I G   KG + E ++LL    +  L  D   + I+ + + K+A   
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------------------------ 484
           +A+ +F +M + GL+PD+  +  LI A C+                              
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 485 -----QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
                  K +++++F+ E +  G+ P    + +++C     G +  A +    M ++G  
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD I+Y  LI G C   ++DEA +  + M+  G+ P E T  TL + YC+ G    A  +
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 600 LESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL--GKDQN--VDRVSLAAL-K 651
              + +      + T +T++  L + +R   A   +  ++  GK  N  +  + L  L K
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635

Query: 652 NACYESNKYALFSDLSQR 669
           N C +   + LF  L  +
Sbjct: 636 NNCVDE-AFKLFQSLCSK 652



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 225/485 (46%), Gaps = 43/485 (8%)

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEM---CARGVCADASSYKLMVVAYCRMGRVTEAD 243
           + + ++RV G        E    +F+ M   C   V  D  +Y +++  +CRMGR+    
Sbjct: 55  LLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGF 114

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCD-------------------------------KG 272
                +L  G  ++N  +  L+   CD                               KG
Sbjct: 115 ATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKG 174

Query: 273 F--RGSIKQAFELLEEMVR---KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           F      ++A ELL  M     +   PNV ++  +I+G   +G  +KA+ LFL+++    
Sbjct: 175 FCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMM-DRG 233

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            +PNV TYT +I G CK + ++RAE + ++M ++G+ P+ +TY  LI+G+  +G ++   
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVV 293

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            +++ M   G  P+ Y Y ++++ LC  GR +EA        ++ ++ +   Y IL+  +
Sbjct: 294 RMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGY 353

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             +    +   L   MV+ GL+PD H +  +  A+ ++  + E+   F +    GL P  
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             + ++I    + G +  AV  F +M   G AP+   + +L+ GLC   K ++A +FY  
Sbjct: 414 VNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATA---MIILESLDKKLWIRTVNTLIRKLCSEKR 624
           M+ +GI P  V   T+    C +G    A   + ++E +  +  + +  TLI   C   R
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533

Query: 625 VGMAA 629
           +  AA
Sbjct: 534 IDEAA 538



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 232/501 (46%), Gaps = 7/501 (1%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           ++   C++  +  IG+ KE   M+ EM+ +GL     T   ++   C  G    A   FD
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M  +G+  + + Y +++  Y   G ++E    L+ M++ G   D+    ++ TA+  K 
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I +A  +  +M ++G  P+V     LID LCK G  + A   F +++ ++   PN+
Sbjct: 393 M---IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM-NEGVAPNI 448

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             + +++ G C  +K  +A+     M  QG+ P+   + +++   C  G   +A  L+DL
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P++ +Y  +I G C  GR+ EA + L       L+ D+ TY  LL  + +   
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A G+F  M++ G+ P +  Y+T++      ++  E+++ +   IT+G       Y  
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ G  ++  +  A K FQ +       +  T+  +I  L K  + ++A   + ++   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAA 629
           + P   T   +A    ++G       +  +++K       R +N L+R+L     +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 630 LFFHKLLGKDQNVDRVSLAAL 650
            +  KL  K+ +++  + A L
Sbjct: 749 AYLSKLDEKNFSLEASTTAML 769



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 190/413 (46%), Gaps = 5/413 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++ NG     H +   + +++A+   + E   +  +M   GL         ++   C+LG
Sbjct: 369 MVENG-LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLG 427

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            V+ A   F++M   GV  +   +  +V   C + +  +A  +   ML++G   D     
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            ++   C KG    + +A  L++ M R G +P+V ++T LI G C  G  ++A +  L +
Sbjct: 488 TILCNLCTKG---QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK-SLDV 543

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           + S   KP+  TY  ++ GYC+  +++ A  +   M   G+ P   TY+++++G      
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A +L   M   G   NI+ YN I++GL K   V EA++L +    ++ Q +  T+ I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K    + A+ LF  +   GL PD+  Y  +      +  ++E +  F     +G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
             P      +++   L  G+I+ A  Y  ++++   + +  T   LIS L + 
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRD 776


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 221/464 (47%), Gaps = 27/464 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  GL+E A  V   M A    + A ++  ++ A C  GRV +A   L  ML RG   D 
Sbjct: 139 CRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDV 198

Query: 259 ATLTLLITAFCD-KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
            T  +L+ A C  +G+R    QA EL++ M  +G +PN  T+ V+ID +C++G  ++A R
Sbjct: 199 VTYNILLQAACKGRGYR----QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA-R 253

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
             L  + S   KPN   Y  ++ G+C  E+   A+ +L+ M  +   PN  T   +I   
Sbjct: 254 ELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTL 313

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G  ++    ++ M K GCT N+  YNA+I G+C++G V  A ELL        + D 
Sbjct: 314 CRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDI 373

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY  +L         + A  L  +M +    PD   + T+I+ +C++  + ++ + F++
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G  P   TY+++I G  + G +  A++    M   G   D + Y  L   L K+ K
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDK 492

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG-------------------DSATAMI 598
           ++E  Q    +   GISP  V   T+    C+ G                   D +T +I
Sbjct: 493 IEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYII 552

Query: 599 ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
           ++E L  + + +    L+ +LCS + V   +L  ++ L  DQN+
Sbjct: 553 LIEGLFYEGYSKEARELLSRLCS-RDVLSNSLIKNEALLLDQNI 595



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 215/462 (46%), Gaps = 34/462 (7%)

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADAS-------------SYKLMVVAYCRMGRV 239
           R+VG +     V  A  +  ++C RG  ADA+             +Y  +V  YCR G +
Sbjct: 85  RLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYCRAGLL 144

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A R +  M              LI A C+   RG +  A  +L+ M+ +G  P+V T+
Sbjct: 145 EDARRVVGGMPAHVQASSAYAHNPLIHALCE---RGRVADALVVLDGMLCRGCAPDVVTY 201

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            +L+   CK     +A  L +  +R++  +PN  TY  +I   C+E  +++A  LL  + 
Sbjct: 202 NILLQAACKGRGYRQALEL-IDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLP 260

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G  PNT  Y +++ G C +  +  A +++D M +E C PN    N II+ LC+KG +Q
Sbjct: 261 SRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQ 320

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +    L+K  +    A+ +TY  ++S   +Q     AL L   M   G  PDI  Y T++
Sbjct: 321 KVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVL 380

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   + +++E+   +       P   T+ ++I  + + G I  A + F++M + GC 
Sbjct: 381 KGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCN 440

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P++ TY  +I GL K  K+++A +    M  KG +  ++ RV                 +
Sbjct: 441 PNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRV-----------------L 483

Query: 600 LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
            ESL+K+  I  V  ++ KL          L+   LLG  +N
Sbjct: 484 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRN 525



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 193/397 (48%), Gaps = 11/397 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  E GR+ +   ++  M   G      T N ++  AC+      A E+ D M A G
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++ A CR G V +A   L+++  RG   +      ++  FC      SI+
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFC------SIE 282

Query: 279 Q---AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +   A E+L+EMVR+   PN  T  V+I+ LC+KG  +K   L+L+ +       NV TY
Sbjct: 283 RWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQK-VTLYLEKMSKHGCTANVVTY 341

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A+ISG C++  ++ A  LL  M+  G  P+  TY +++ G C    +E A +LM  M +
Sbjct: 342 NAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               P+   +N II   C+KG + +A+E+ K+  ++    +  TY+ ++    K  + +Q
Sbjct: 402 NDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ 461

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L   M   G N D   Y  L  +  ++ K++E  +   +   +G+ P    Y +++ 
Sbjct: 462 ALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLL 520

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           G  R+G    A+     M   GC PD  TY  LI GL
Sbjct: 521 GLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 181/364 (49%), Gaps = 5/364 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           ++   ++  M   G      T N ++   C  G V+ A E+ + + +RG   +  +Y  +
Sbjct: 215 RQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTV 274

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +  +C + R  +AD  L  M+      + ATL ++I   C KG    +++    LE+M +
Sbjct: 275 LKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGL---LQKVTLYLEKMSK 331

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G   NV T+  +I G+C++G  + A  L L  ++S   KP++ TY  ++ G C  ++  
Sbjct: 332 HGCTANVVTYNAVISGMCEQGNVDSALEL-LSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE L+ +M +   LP+ +T+ ++I   C+ G   +A+++   M ++GC PN   Y+ II
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            GL K G++++A ELL +   +    DK+ Y +L     K+ + ++ + +  ++  +G++
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P    Y T++   CR  K   +     + ++ G  P + TY  +I G   +G    A + 
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEAREL 569

Query: 530 FQRM 533
             R+
Sbjct: 570 LSRL 573



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 148/299 (49%), Gaps = 9/299 (3%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  ++++    G L++    + +M+ +G      T N V+   CE G V+ A E+   M 
Sbjct: 306 LNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G   D  +Y  ++   C   R  +A+  +  M     + DN+T   +I+ +C KG   
Sbjct: 366 SFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGL-- 423

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT- 334
            I QAFE+ ++M  KG  PN  T++ +I GL K G  E+A  L  ++    N   N    
Sbjct: 424 -ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMA---NKGFNTDKM 479

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +     KE+K+     ++ ++++ G+ P T  Y +++ G C+ G  + A D++  M 
Sbjct: 480 YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMV 539

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI--TYTILLSEHLKQA 451
             GC P+   Y  +I+GL  +G  +EA ELL +   R++ ++ +     +LL ++++ +
Sbjct: 540 SCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALLLDQNIRSS 598


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 218/488 (44%), Gaps = 69/488 (14%)

Query: 178  EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
            EM ++G+       NRV+ +  +    +    V +EM   G+     +Y  ++ ++ + G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 238  RVTEADRWLSAMLDRGA--ILDNATLTLLITAFCDKG----------------------- 272
            R  +    L  M  RG+  + ++ T  ++IT    KG                       
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTY 1193

Query: 273  --------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
                     RG +K+ ++L  EM  +G  P V T+  +I GL + G  E A   F ++ R
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM-R 1252

Query: 325  SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            +    P+V TY ++++GYCK   +  A +L   ++  GL P   TY  LI G+C++G+ E
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312

Query: 385  RAYDLMDLMGKEGCTPNIYAYNAIIDG--------------------------------L 412
             A  L + MG++GC PN+  Y  ++ G                                +
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372

Query: 413  CKK---GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            C +   G +  A+EL +      + +D +TY IL+    K    K A  L  +MV  GL 
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 1432

Query: 470  PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            PD   YT LI A C +  ++E+ K F   I+ GL P+  T+T +I  Y R GN+ SA  +
Sbjct: 1433 PDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGW 1492

Query: 530  FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            F++M + G  P+ ITY  LI  LC+  +   A   +  M+ +G+   + T   L    CK
Sbjct: 1493 FRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCK 1552

Query: 590  QGDSATAM 597
             G+   AM
Sbjct: 1553 VGNWEDAM 1560



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 210/462 (45%), Gaps = 53/462 (11%)

Query: 136  YIVCATSLISNGNFERAHEVMQCM-----VSSFA---------EIGRLKEGFSMVIEMTN 181
            Y V  T L   G+ E A E+++ M      SSF            G +K+ + + +EM N
Sbjct: 1159 YNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMEN 1218

Query: 182  NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
             G+     T N ++    + GLVE A+  F EM A G+  D  +Y  ++  YC+ G    
Sbjct: 1219 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG---- 1274

Query: 242  ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
                                              ++K+A  L  ++ R G  P V T+ +
Sbjct: 1275 ----------------------------------NLKEALLLFGDLRRAGLAPTVLTYNI 1300

Query: 302  LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
            LIDG C+ G  E+A R+  + +      PNV TYT ++ G      +  A    + M  +
Sbjct: 1301 LIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359

Query: 362  GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            GL P+   Y + I     +G+  RA++L +++  EG + +   YN +I GLCK G +++A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419

Query: 422  YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             EL  K     LQ D ITYT L+  H ++   ++A  +F  M+  GL P    +T +I A
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479

Query: 482  FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            +CR+  +  +  +F++ +  G+ P + TY  +I    R G    A  +F  M + G   +
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539

Query: 542  NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
              TY  LI G CK    ++A +FY  M   GI P  +T   L
Sbjct: 1540 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 1581



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++ + + G LKE   +  ++   GL     T N ++   C LG +E A  + +EM  +G
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               +  +Y +++     +  +  A  +   ML +G   D        T  C +   G I 
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN---TRICAELILGDIA 1382

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +AFEL E ++ +G   +  T+ +LI GLCK G  + A  L +K+V S+  +P+  TYT +
Sbjct: 1383 RAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV-SNGLQPDCITYTCL 1441

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I  +C+   +  A  +   M   GLLP+  T+T +I+ +C+ GN   AY     M +EG 
Sbjct: 1442 IHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGV 1501

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             PN   YN +I  LC+ GR Q A     +  +R L A+K TYT+L+  + K    + A+ 
Sbjct: 1502 EPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMR 1561

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAF 482
             +  M + G++PD   +  L+  F
Sbjct: 1562 FYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 182/428 (42%), Gaps = 75/428 (17%)

Query: 285  EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYC 343
            EEM+  G +P++ T+  L+D   K+G  +K   L  ++  R     PN  TY  +I+G  
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 1167

Query: 344  KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
            ++  +  A  L+E M+      ++ TY  LI G    G  ++ YDL   M  EG  P + 
Sbjct: 1168 RKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVV 1226

Query: 404  AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
             YNA+I GL + G V+ A     +     L  D ITY  LL+ + K    K+AL LF  +
Sbjct: 1227 TYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 1286

Query: 464  VKAGLNPDIHAYTTLIAAFCRQKKMKE--------------------------------- 490
             +AGL P +  Y  LI  +CR   ++E                                 
Sbjct: 1287 RRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSL 1346

Query: 491  --SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
              + +FF E ++ GL P    Y + IC  L  G+I+ A +  + +   G + D +TY  L
Sbjct: 1347 AMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNIL 1406

Query: 549  ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG----------------- 591
            I GLCK   L +A +    M+  G+ P  +T   L + +C++G                 
Sbjct: 1407 IHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGL 1466

Query: 592  --DSATAMIILESLDKK-------LWIR------------TVNTLIRKLCSEKRVGMAAL 630
               + T  +I+ +  ++        W R            T N LI  LC   R  +A+ 
Sbjct: 1467 LPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASH 1526

Query: 631  FFHKLLGK 638
             FH++L +
Sbjct: 1527 HFHEMLER 1534



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 41/293 (13%)

Query: 356  ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAIIDGLC 413
            E M E G+ P+  TY +L+    K G  ++   L+  M   G  C PN   YN +I GL 
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 1167

Query: 414  KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
            +KG ++EA EL++   +   +A   TY  L++  L +   K+   L   M          
Sbjct: 1168 RKGDLEEAAELVE-GMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM---------- 1216

Query: 474  AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
                            E+E         G+ PT  TY +MI G L+ G + +A   F  M
Sbjct: 1217 ----------------ENE---------GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251

Query: 534  NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              +G  PD ITY +L++G CK   L EA   +  +   G++P  +T   L   YC+ GD 
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311

Query: 594  ATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
              A I+ E + ++  +  V T   L++   + + + MA  FF ++L K    D
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPD 1364


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 250/521 (47%), Gaps = 12/521 (2%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
            C++ S+   G + E F++   M   G  P + +  N + G+ C+ G +  A++    + 
Sbjct: 452 NCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGL-CQGGHLVQAKQFMFCLL 510

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
                 D  ++  +++  C+ G + EA      M+    + D  T T+L++ FC KG   
Sbjct: 511 DIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKG--- 567

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            I  A  +L+ M+ KG  P+   +T L++GL  +G  + A  +F +++  +    +   Y
Sbjct: 568 KILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 627

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            ++++GY K   +N  + ++  M +  + PN+ +Y  L++G+ K G F ++  L   M +
Sbjct: 628 NSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVR 687

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+   Y  +I GL + G +  A + L+K     +  D++ + IL++   ++++   
Sbjct: 688 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 747

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF  M    ++P    Y+ +I    R+  + +S +  +E +  GL P    Y +++ 
Sbjct: 748 ALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVN 807

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              R G I  A +  + M  +G  P ++   ++I GLCK  KL+EA   + +M+  G+ P
Sbjct: 808 AKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVP 867

Query: 576 CEVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
              T  TL +  CK+   A A+    ++ES   K+ + + N LI  LC +KR+  A   +
Sbjct: 868 TVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLY 927

Query: 633 HKLLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
            ++  K    +  +   L  A Y +    N   L  D+ +R
Sbjct: 928 EEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEER 968



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 234/543 (43%), Gaps = 53/543 (9%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
            SL +NG F +A +++Q M +      RL                  + T N ++    +
Sbjct: 231 NSLCTNGEFRKAEDMLQKMKTC-----RLSN----------------SVTYNTILHWYVK 269

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G  + A  V ++M    + AD  +Y +M+   CR+ R   A   L  M     I D  T
Sbjct: 270 KGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECT 329

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF- 319
              LI  F  +G    I  A  +   M+R+ + P+V T+T +IDG C+    +KA  +  
Sbjct: 330 YNTLINGFFGEG---KINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLS 386

Query: 320 ------------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                             LK +  D   P++ TY+A+I+    E  +  AE   + M   
Sbjct: 387 EMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRM 442

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            +  ++ ++  +I  +C  GN   A+ + D M + G +PN+  Y  ++ GLC+ G + +A
Sbjct: 443 KISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 502

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            + +          D+ T+  LL    K     +AL L  +MVK    PDIH YT L++ 
Sbjct: 503 KQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSG 562

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN-QIGCAP 540
           FCR+ K+  +    Q  +  G+ P    YT ++ G + +G + +A   FQ +  + G   
Sbjct: 563 FCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYA 622

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D I Y +L++G  K   ++   +    M    + P   +   L + Y K G  + ++ + 
Sbjct: 623 DCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLY 682

Query: 601 ESLDKKLWIRTVNT----LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
           + + +K  IR  N     LI  L     + +A  F  K++ +    DR+    L  A  E
Sbjct: 683 KYMVRK-GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSE 741

Query: 657 SNK 659
            +K
Sbjct: 742 KSK 744



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 166/341 (48%), Gaps = 8/341 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G +   + +  +M    V  +++SY +++  Y + G+ +++      M+ +G   DN T 
Sbjct: 638 GNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTY 697

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-- 319
            LLI    + G    I  A + LE+MV +G  P+     +LI    +K     A +LF  
Sbjct: 698 RLLILGLSECGL---IDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNC 754

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           +K +R     P+  TY+AMI+G  ++  ++++  +L  M + GL PN   Y +L+   C+
Sbjct: 755 MKWLR---MSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCR 811

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           VG  +RA+ L + M   G  P   A ++II GLCK G+++EA  +     +  +     T
Sbjct: 812 VGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVAT 871

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           +T L+    K+++   AL L   M    L  D+ +Y  LI   C+ K++ ++   ++E  
Sbjct: 872 FTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMK 931

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           + GL+P   TY ++       G + +  +  + + + G  P
Sbjct: 932 SKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 169/349 (48%), Gaps = 21/349 (6%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G+K +      ++  L ++G ++  + LFL+   + N+  +V T   +++  C   +  +
Sbjct: 183 GFKASPIACNTILRALVEQGESKYVW-LFLRESLAHNFPLDVTTCNILLNSLCTNGEFRK 241

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE +L++MK    L N+ TY ++++ + K G F+ A  +++ M ++    +IY YN +ID
Sbjct: 242 AEDMLQKMK-TCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMID 300

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LC+  R   A+ LLK+  + +L  D+ TY  L++    + +   A  +F  M++    P
Sbjct: 301 KLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVP 360

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT-----KETYTSMI----------- 514
            +  YTT+I  +CR +++ ++     E    G+ P+     K+   SM+           
Sbjct: 361 SVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTY 420

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
              + +G I+ A  + Q M+++  + D++++  +I   C +  + EA   Y++M+  G S
Sbjct: 421 SALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHS 480

Query: 575 PCEVTRVTLAYEYCKQGDSATA---MIILESLDKKLWIRTVNTLIRKLC 620
           P   T   L    C+ G    A   M  L  +   +  +T N L+  +C
Sbjct: 481 PNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGIC 529


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 223/465 (47%), Gaps = 11/465 (2%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +G      T N ++   C+ G  + A ++ D M ++G+ AD  +Y +++   C+  R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
             +    L  M  R    +  T   LI     +   G   + F    EM+     PN  T
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFN---EMLMLNLSPNRVT 117

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           + +LIDG C  G  E+A RL L ++ +   +P+   Y A++SG  K  K + A+ L+ER+
Sbjct: 118 YNILIDGHCDCGNFEQALRL-LDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERI 176

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           +  G++     YT++I G CK G  + +  L+D+M K+G +P+I  ++ +I+G CK G++
Sbjct: 177 RMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKI 236

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           + A E++ K F+  L  + + Y  L+    K+ +  +A   +  M + G + D      L
Sbjct: 237 KNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVL 296

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I++ CR  ++ E+E F +   T  L P   T+  +I GY   G+   A   F  M ++G 
Sbjct: 297 ISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGH 356

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV--TLAYEYCKQGDSATA 596
            P + TYG+L+ GLCK   L EA +    +    I     T +  T+  E CK+G  + A
Sbjct: 357 CPSHFTYGSLLKGLCKGGNLREAKKLLYKL--HHIPAAVDTNIYNTILSETCKRGKLSDA 414

Query: 597 MIILESLDKKLWIRTVNTLIRKLCSEKRVGM---AALFFHKLLGK 638
           + +   + +   +   +T    L    R G    A LFF K L +
Sbjct: 415 VALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALAR 459



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 239/518 (46%), Gaps = 20/518 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G  ++   ++  M   GL         ++    +L   + A+ + + +   G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  M+   C+ G + E+ + L  M   GA  D  T ++LI  FC  G    IK
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAG---KIK 237

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E++ +M + G  PN   +  LI   CKKG   +AFR +  + R+  +  +      +
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRT-GHDVDYFICNVL 296

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C+  ++  AE  +  M    L PN+ T+  +I G+  +G+  +A+ + D M K G 
Sbjct: 297 ISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGH 356

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y +++ GLCK G ++EA +LL K        D   Y  +LSE  K+ +   A+ 
Sbjct: 357 CPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVA 416

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYTSMICGY 517
           LF  MV+  + PD H Y  ++A   R+ KM  +  FF++A+  G L P K  YTS+  G 
Sbjct: 417 LFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGL 476

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G  ++A   ++ M   G  PD I   A++ G  +  K+++  + +  M    ++P  
Sbjct: 477 FKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSL 536

Query: 578 VTRVTLAYEYCKQGD---------SATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
            T   L + Y K+ D           T M I  S DK     T +++I  LC    + + 
Sbjct: 537 ATYNILLHGYSKKKDLLKCSKFYNIMTRMGI--SPDK----LTCHSIILGLCKSGMLDVG 590

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
                K++ +D  VD+++L  L     E++K     DL
Sbjct: 591 FKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDL 628



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 191/401 (47%), Gaps = 5/401 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  VF+EM    +  +  +Y +++  +C  G   +A R L  M  +G   D      L++
Sbjct: 99  ATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLS 158

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                        A  L+E +   G       +T +IDGLCK G  +++ +L L ++  D
Sbjct: 159 GLSK---LAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQL-LDMMFKD 214

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P++ T++ +I+G+CK  K+  A+ ++ +M + GL PN   Y +LIY  CK G+   A
Sbjct: 215 GASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEA 274

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           +     M + G   + +  N +I  LC+ GRV EA + ++     +L  + IT+  +++ 
Sbjct: 275 FRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIING 334

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +    +  +A  +F  M+K G  P    Y +L+   C+   ++E++K   +         
Sbjct: 335 YGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVD 394

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y +++    + G +S AV  F  M Q    PD+ TY  +++GL ++ K+  A  F+E
Sbjct: 395 TNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFE 454

Query: 567 SMIGKG-ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             + +G +SP +V   +L     K G S  A  I E ++ K
Sbjct: 455 KALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHK 495



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 218/506 (43%), Gaps = 41/506 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++SS    GR+ E    +  M+   L   + T + ++     LG    A  +FDEM
Sbjct: 292 ICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEM 351

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G C    +Y  ++   C+ G + EA + L  +    A +D      +++  C    R
Sbjct: 352 IKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCK---R 408

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +  A  L  EMV+    P+ +T+ +++ GL +KG    A   F K +      PN   
Sbjct: 409 GKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVM 468

Query: 335 YT-----------------------------------AMISGYCKEEKMNRAEMLLERMK 359
           YT                                   A++ GY +  KM + E L  +M+
Sbjct: 469 YTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQ 528

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
              L P+  TY  L++G+ K  +  +     ++M + G +P+    ++II GLCK G + 
Sbjct: 529 SGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLD 588

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
             +++LKK    +   D++T  +L++   +  +  +A  L       G+ PD++ Y  + 
Sbjct: 589 VGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIF 648

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
               R   ++ES     + +  G+ PT   Y S+I G  R G+I  A +    M  IG +
Sbjct: 649 TGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVS 708

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
             ++   A++ GL +  K++EA    + M+ K + P   T  TL +  CK+   + A+ +
Sbjct: 709 SWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKL 768

Query: 600 LESL---DKKLWIRTVNTLIRKLCSE 622
              +     KL +   N LI  LC++
Sbjct: 769 RGKMALYGVKLDVVAYNVLISGLCAD 794



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 201/468 (42%), Gaps = 40/468 (8%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +H     ++    + G L+E   ++ ++ +    + T+  N ++   C+ G +  A  +F
Sbjct: 359 SHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALF 418

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            EM    V  D+ +Y +++    R G++  A  +    L RG +  N    ++ T+  D 
Sbjct: 419 GEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPN---KVMYTSLFDG 475

Query: 272 GFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            F+ G    A  + EEM  KG  P+      ++DG  + G  EK  +LF+K+ +S +  P
Sbjct: 476 LFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKM-QSGSLTP 534

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE------ 384
           ++ TY  ++ GY K++ + +       M   G+ P+  T  S+I G CK G  +      
Sbjct: 535 SLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKML 594

Query: 385 -----------------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
                                        +A+DL+++    G  P++  YNAI  GL + 
Sbjct: 595 KKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRA 654

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
             ++E++ LL    +R +      Y  L++   +  + + A  L   M   G++    A 
Sbjct: 655 SALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAE 714

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           + ++    +  K++E+       +   L PT  T+T+++    +   +S A+K   +M  
Sbjct: 715 SAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMAL 774

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            G   D + Y  LISGLC       A   YE M  +G+ P   T  TL
Sbjct: 775 YGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTL 822



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 199/427 (46%), Gaps = 25/427 (5%)

Query: 88  LQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNG 147
           +Q ++   +H  AI ++A L+ +   + AL FF  A+          +Y    TSL    
Sbjct: 422 VQFNVLPDSHTYAI-ILAGLSRKGKMVPALLFFEKALARGTLSPNKVMY----TSL---- 472

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
            F+   +V Q   +S+           +  EM + G+   T  +N V+     +G +E  
Sbjct: 473 -FDGLFKVGQSNAASY-----------IYEEMEHKGINPDTIAINAVLDGYSRMGKMEKV 520

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E++F +M +  +    ++Y +++  Y +   + +  ++ + M   G   D  T   +I  
Sbjct: 521 EKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILG 580

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C  G    +   F++L++M+ +    +  T  +LI   C+     KAF L L +     
Sbjct: 581 LCKSGM---LDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDL-LNIKNLLG 636

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P+V+TY A+ +G  +   +  + +LL  M E+G+ P +  Y SLI G C++G+ + A+
Sbjct: 637 IIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAF 696

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L D M   G +    A +A++ GL + G+V+EA  +L    Q+ L     T+T L+   
Sbjct: 697 RLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHML 756

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+A+  +AL L  +M   G+  D+ AY  LI+  C       +   ++E    GL+P  
Sbjct: 757 CKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNT 816

Query: 508 ETYTSMI 514
            TY ++I
Sbjct: 817 TTYCTLI 823



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   G  P  +TY  +++  CK+ +   A    + M  KGI     T   L  + CK   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 593 SATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           SA   ++L+ + K++      T NTLI  L  E+++G A   F+++L  + + +RV+
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVT 117


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 8/364 (2%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  RG+  +  +  +++ ++C++G +  A   L+ +L  G   +  TL  LI   C  G
Sbjct: 87  KMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG 146

Query: 273 -------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                    G +K A +L  +M+ +   P+VYT T+L+DG CK+G  ++A +  L ++  
Sbjct: 147 KIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA-KNVLAMMMI 205

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
              KP V TY +++ GY   +++N+A+ +   M + G+ P+  +Y+ LI G CK+   + 
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A +L+  M  +   PN+  Y+++IDGLCK G++  A +L+ +   R    + +TY+ +L 
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +   A+ L  +M   G+ P+++ YT LI   C+  K++++ K F++ +  G   
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
              TYT MI G+   G    A+    +M   GC P+  TY  +I  L K+ + + A +  
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445

Query: 566 ESMI 569
             MI
Sbjct: 446 CEMI 449



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 161/343 (46%), Gaps = 29/343 (8%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  +G KPN+    +LI+  C+ G    AF +  K+++   YKPN  T   +I G 
Sbjct: 84  LSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKM-GYKPNTITLNTLIKGL 142

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C   K++                           HC VG  + A DL + M  E   P++
Sbjct: 143 CLNGKIHDK-------------------------HCIVGKLKDAVDLFNKMILENINPDV 177

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           Y +  ++DG CK+GRV+EA  +L     + ++   +TY  L+  +    +  +A  +F  
Sbjct: 178 YTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNT 237

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M + G++PDI +Y+ LI  FC+ K M E+ +  +E     + P   TY+S+I G  + G 
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           IS A+K    M+  G  P+ +TY +++  LCK  ++D A      M  +GI P   T   
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357

Query: 583 LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSE 622
           L    C+ G    A  + E L  K   L + T   +I+  C +
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 170/342 (49%), Gaps = 15/342 (4%)

Query: 245 WLSAMLD-RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +LS  ++ RG   +     +LI +FC     G I  AF +L ++++ G+KPN  T   LI
Sbjct: 83  YLSQKMEFRGIKPNLVNCNILINSFCQ---LGHIPSAFSVLTKILKMGYKPNTITLNTLI 139

Query: 304 DGLCKKGWT----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            GLC  G            + A  LF K++  +N  P+V+T+T ++ G+CKE ++  A+ 
Sbjct: 140 KGLCLNGKIHDKHCIVGKLKDAVDLFNKMIL-ENINPDVYTFTILVDGFCKEGRVKEAKN 198

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L  M  QG+ P   TY SL+ G+  V    +A  + + M + G +P+I +Y+ +I+G C
Sbjct: 199 VLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFC 258

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K   + EA ELLK+   +++  + +TY+ L+    K  +   AL L   M   G  P+I 
Sbjct: 259 KIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIV 318

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y++++ A C+  ++  +     +    G+ P   TYT +I G  + G +  A K F+ +
Sbjct: 319 TYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDL 378

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              G   +  TY  +I G C +   DEA      M   G  P
Sbjct: 379 LVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIP 420



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 175/368 (47%), Gaps = 49/368 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIA---------CELGLVEYAE 208
           +++SF ++G +   FS++ ++   G    T TLN ++ G+          C +G ++ A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG---------AILDNA 259
           ++F++M    +  D  ++ ++V  +C+ GRV EA   L+ M+ +G         +++D  
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 260 TL--------------------------TLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
            L                          ++LI  FC       + +A ELL+EM  K   
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM---MDEAMELLKEMHHKQII 279

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           PNV T++ LIDGLCK G    A +L  ++       PN+ TY++++   CK  +++ A  
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEM-HDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL +MK QG+ PN  TYT LI G C+ G  E A  + + +  +G   N+Y Y  +I G C
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
            KG   EA  LL K        +  TY I++    K+ E + A  L C M++   +  + 
Sbjct: 399 DKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVA 458

Query: 474 AYTTLIAA 481
               LIA+
Sbjct: 459 LTNDLIAS 466



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 29/320 (9%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A  LF +L++ +   PN+  +  ++    K +  +    L ++M+ +G+ PN     
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI   C++G+   A+ ++  + K G  PN    N +I GLC  G++ +           
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHD----------- 150

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
                         +H    + K A+ LF +M+   +NPD++ +T L+  FC++ ++KE+
Sbjct: 151 --------------KHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA 196

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +      +  G+ P   TY S++ GY     ++ A   F  M Q+G +PD  +Y  LI+G
Sbjct: 197 KNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILING 256

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
            CK   +DEA +  + M  K I P  VT  +L    CK G  + A+ +++ +  +     
Sbjct: 257 FCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPN 316

Query: 609 IRTVNTLIRKLCSEKRVGMA 628
           I T ++++  LC   +V  A
Sbjct: 317 IVTYSSILDALCKNHQVDNA 336



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 19/213 (8%)

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A+ LF R+++    P    +  ++ +  + K         Q+    G+ P      
Sbjct: 42  DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----------SKLDEA 561
            +I  + + G+I SA     ++ ++G  P+ IT   LI GLC             KL +A
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQG-----DSATAMIILESLDKKLWIRTVNTLI 616
              +  MI + I+P   T   L   +CK+G      +  AM++++ +  K  + T N+L+
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI--KPGVVTYNSLM 219

Query: 617 RKLCSEKRVGMAALFFHKL--LGKDQNVDRVSL 647
                 K+V  A   F+ +  LG   ++   S+
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSI 252



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 3/119 (2%)

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y S    +  + ++  AV  F R+ Q    P NI +  ++  L K           + M 
Sbjct: 30  YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKME 89

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
            +GI P  V    L   +C+ G   +A  +L  + K   K    T+NTLI+ LC   ++
Sbjct: 90  FRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKI 148


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 243/544 (44%), Gaps = 9/544 (1%)

Query: 43  SKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAIT 102
           S  P F S+S +    + L        L ++ +  H +  P  ++    + S+   +  +
Sbjct: 28  SLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHS 87

Query: 103 VVASLANEAGSM-VALSFFYWAIGFAKFRHFMRL-YIVCATSLISNGNFERAHEVMQCMV 160
            + SL+ +  S  +    +  AI      H  R+ +   A + I     +        ++
Sbjct: 88  TLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLI 147

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
                 G++ E   +  +M   G      T   ++   C++G    A  +   M  +G C
Sbjct: 148 RGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGNC 206

Query: 221 -ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             +   +  ++ + C+  +VTEA    S M+ +G   +  T   LI   C        K 
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKH 263

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L+ EMV     P+V+T   ++D LCK+G   +A  +   ++     +PNV TY A++
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALM 322

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G+C   +++ A  + + M  +  + N  +Y +LI G+CK+ + ++A  L + M ++  T
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   YN +I GLC  GR+Q+A  L  +   R    D +TY  L     K     +A+ L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              +  +  +PDI  YTT++   CR  +++++   F    + GL P   TY  MI G  +
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A K F  MN+ GC+P++ TY  +  G  + ++     +  E M+ +G S  +V+
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS-VDVS 561

Query: 580 RVTL 583
             TL
Sbjct: 562 TTTL 565



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S A+        S+  +M + G+P    TL  V+   C L  V++A     ++   G
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLG 135

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA+++  ++   C  G++ EA      M+  G   +  T   LI   C  G   +  
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVG---NTS 192

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL  M +   +PNV   + LID LCK     +AF +F +++ +    PN+ TY ++
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSL 251

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  +      L+  M +  ++P+  T  +++   CK G    A+D++D+M   G 
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YNA++DG C +  V  A ++      ++  A+ I+Y  L++ + K     +A+ 
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M +  L P+   Y TLI   C   +++++   F E +  G  P   TY ++     
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++ ++  A+   + +      PD   Y  ++ G+C+  +L++A   + ++  KG+ P   
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   + +  CKQG  A A  +   ++K 
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKN 519



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++S   + R+   FS + ++   G     +T   ++   C  G +  A  +FD+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C++G  + A R L +M       +    + LI + C       + 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR---QVT 227

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF +  EM+ KG  PN+ T+  LI GLCK    +    L  ++V S    P+V T   +
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTV 286

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +   CKE  +  A  +++ M  +G+ PN  TY +L+ GHC     + A  + D M  + C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N+ +YN +I+G CK   V +A  L ++  ++EL  + +TY  L+         + A+ 
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  MV  G  PD+  Y TL    C+ + + ++    +    +   P  + YT+++ G  
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A   F  ++  G  P+  TY  +I GLCKQ  L EA + +  M   G SP + 
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T   +   + +  ++   + +LE +
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEM 551



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 194/418 (46%), Gaps = 24/418 (5%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   V  A  +F EM  +G+  +  +Y  ++   C++         ++ M+D   + D 
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            TL  ++ A C +G    + +A ++++ M+ +G +PNV T+  L+DG C +   + A ++
Sbjct: 281 FTLNTVVDALCKEGM---VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F  +V  D    NV +Y  +I+GYCK + +++A  L E M  Q L PNT TY +LI+G C
Sbjct: 338 FDTMVHKDCVA-NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG  + A  L   M   G  P++  Y  + D LCK   + +A  LLK         D  
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            YT +L    +  E + A  LF  +   GL P++  Y  +I   C+Q  + E+ K F E 
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   TY  +  G+LR+      ++  + M   G + D ++   L+ G+     L
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGL 575

Query: 559 DEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII-LESLDKKL 607
           D++ +         YE  +G+          TL +++  +  S   M+   E L  KL
Sbjct: 576 DQSVKQILCKIVILYERNLGE----------TLLFQFWMEAPSEKLMVTECEELSMKL 623



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 8/396 (2%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L  +M   G  P+VYT  ++I+ LC     + AF    K+++   ++P+  T+T +I 
Sbjct: 90  LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL-GHQPDATTFTTLIR 148

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G C E K+  A  L ++M  +G  PN  TY +LI G CKVGN   A  L+  M +  C P
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 208

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  ++ +ID LCK  +V EA+ +  +   + +  + +TY  L+    K  E K    L 
Sbjct: 209 NVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM 268

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MV + + PD+    T++ A C++  + E+       I  G+ P   TY +++ G+   
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  AVK F  M    C  + I+Y  LI+G CK   +D+A   +E M  + ++P  VT 
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL +  C  G    A+ +   +  +  I    T  TL   LC  + +  A      + G
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 638 KDQNVD-RVSLAALKNACYES---NKYALFSDLSQR 669
            + + D ++    L   C      +   LFS+LS +
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 38/249 (15%)

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA     +   ++     + +  LL+   K       L L  +M   G+ PD++    
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I + C   ++  +     + +  G  P   T+T++I G   +G I  A+  F +M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 538 CAPDNITYGALISG-----------------------------------LCKQSKLDEAC 562
             P+ +TYG LI+G                                   LCK  ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKL 619
             +  MI KGISP  VT  +L +  CK  +      ++ E +D K+   + T+NT++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 620 CSEKRVGMA 628
           C E  V  A
Sbjct: 291 CKEGMVAEA 299



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N++   ++   ++      G L++   +   +++ GL     T N ++   C+ GL
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  A ++F EM   G   +  +Y L+   + R          L  ML RG  +D +T TL
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 264 LITAFCDKGFRGSIKQ 279
           L+    D G   S+KQ
Sbjct: 566 LVGMLSDDGLDQSVKQ 581


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 227/471 (48%), Gaps = 26/471 (5%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  +   G+     S+ +++   C +G + EA    S M
Sbjct: 237 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 296

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D+ T  +L   F      G I  A+E++ +M+ KG  P+V T+T+L+ G C+ 
Sbjct: 297 NKHGVEPDSVTYNILAKGF---HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 353

Query: 310 GWTEKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           G  +    L LK + S  ++ N +   + M+SG CK  +++ A  L  +MK  GL P+  
Sbjct: 354 GNIDMGLVL-LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 412

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+ +I+G CK+G F+ A  L D M  +   PN   + A++ GLC+KG + EA  LL   
Sbjct: 413 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 472

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  D + Y I++  + K    ++AL LF  +++ G+ P +  + +LI  +C+ + +
Sbjct: 473 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 532

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+ K        GL P+  +YT+++  Y   GN  S  +  + M   G  P N+TY  +
Sbjct: 533 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592

Query: 549 ISGLCK-----------QSKLDEAC-QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             GLC+           + ++ E C Q    M  +GI P ++T  T+    C+    + A
Sbjct: 593 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 652

Query: 597 MIILE-----SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            + LE     +LD      T N LI  LC    +  A  F + L  ++QNV
Sbjct: 653 FVFLEIMKSRNLDAS--SATYNILIDSLCVYGYIRKADSFIYSL--QEQNV 699



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 24/512 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + ++G +    S    +   GL     + N ++   C +G +  A E+  +M   G
Sbjct: 241 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 300

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y ++   +  +G ++ A   +  MLD+G   D  T T+L+   C     G+I 
Sbjct: 301 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ---LGNID 357

Query: 279 QAFELLEEMVRKGWKPN-VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
               LL++M+ +G++ N +   +V++ GLCK G  ++A  LF ++ ++D   P++  Y+ 
Sbjct: 358 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSI 416

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K + A  L + M ++ +LPN+ T+ +L+ G C+ G    A  L+D +   G
Sbjct: 417 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 476

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            T +I  YN +IDG  K G ++EA EL K   +  +     T+  L+  + K     +A 
Sbjct: 477 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 536

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG- 516
            +   +   GL P + +YTTL+ A+      K  ++  +E    G+ PT  TY+ +  G 
Sbjct: 537 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 596

Query: 517 -----------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
                       LR+       +  + M   G  PD ITY  +I  LC+   L  A  F 
Sbjct: 597 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 656

Query: 566 ESMIGKGISPCEVTRVTL-----AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           E M  + +     T   L      Y Y ++ DS   +  L+  +  L      TLI+  C
Sbjct: 657 EIMKSRNLDASSATYNILIDSLCVYGYIRKADS--FIYSLQEQNVSLSKFAYTTLIKAHC 714

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +    MA   FH+LL +  NV     +A+ N
Sbjct: 715 VKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 746



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 216/433 (49%), Gaps = 25/433 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
           ++G +  G  ++ +M + G  L  S +   V ++  C+ G ++ A  +F++M A G+  D
Sbjct: 352 QLGNIDMGLVLLKDMLSRGFEL-NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 410

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y +++   C++G+   A      M D+  + ++ T   L+   C KG    + +A  
Sbjct: 411 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM---LLEARS 467

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL+ ++  G   ++  + ++IDG  K G  E+A  LF K+V      P+V T+ ++I GY
Sbjct: 468 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGY 526

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + +  A  +L+ +K  GL P+  +YT+L+  +   GN +   +L   M  EG  P  
Sbjct: 527 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 586

Query: 403 YAYNAIIDGLCKKGRVQEAYELLK-KAFQ------RELQA-----DKITYTILLSEHLKQ 450
             Y+ I  GLC+  + +    +L+ + F+      R++++     D+ITY  ++ ++L +
Sbjct: 587 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII-QYLCR 645

Query: 451 AETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
            +      +F  ++K+  L+     Y  LI + C    +++++ F        +  +K  
Sbjct: 646 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 705

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I  +   G+   AVK F ++   G       Y A+I+ LC++  ++E+  F+  M+
Sbjct: 706 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 765

Query: 570 GKGISP----CEV 578
            +GISP    CEV
Sbjct: 766 SQGISPDLDICEV 778



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 37/343 (10%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N +T++ ++DGLC++   E A  LFL+     +  P+V ++ +++SGYCK   ++ A+  
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 257

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              + + GL+P+  ++  LI G C VG+   A +L   M K G  P+   YN +  G   
Sbjct: 258 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 317

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
            G +  A+E+++    + L  D ITYTIL                               
Sbjct: 318 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 377

Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                LS   K     +AL LF +M   GL+PD+ AY+ +I   C+  K   +   + E 
Sbjct: 378 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 437

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   T+ +++ G  + G +  A      +   G   D + Y  +I G  K   +
Sbjct: 438 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 497

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +EA + ++ +I  GI+P   T  +L Y YCK  + A A  IL+
Sbjct: 498 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 540



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 1/274 (0%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N HTY+ ++ G C+++K+  A + L   + + + P+  ++ S++ G+CK+G  + A    
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + K G  P++Y++N +I+GLC  G + EA EL     +  ++ D +TY IL       
Sbjct: 259 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 318

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKET 509
                A  +   M+  GL+PD+  YT L+   C+   +       ++ ++ G    +   
Sbjct: 319 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 378

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + M+ G  + G I  A+  F +M   G +PD + Y  +I GLCK  K D A   Y+ M 
Sbjct: 379 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 438

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            K I P   T   L    C++G    A  +L+SL
Sbjct: 439 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 472



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 46/331 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L++MK+Q L  +T +Y S++Y         R  D M  + KE    N + Y+ ++DGLC
Sbjct: 159 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 211

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++ ++++A   L+ +  +++    +++  ++S + K      A   FC ++K GL P ++
Sbjct: 212 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 271

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++  LI   C    + E+ +   +    G+ P   TY  +  G+   G IS A +  + M
Sbjct: 272 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 331

Query: 534 NQIGCAPDNITY------------------------------------GALISGLCKQSK 557
              G +PD ITY                                      ++SGLCK  +
Sbjct: 332 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 391

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI--RTVNT 614
           +DEA   +  M   G+SP  V    + +  CK G    A+ + + + DK++    RT   
Sbjct: 392 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 451

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           L+  LC +  +  A      L+   + +D V
Sbjct: 452 LLLGLCQKGMLLEARSLLDSLISSGETLDIV 482


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 8/422 (1%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  ++  +M   GL  +  T N ++   C  G V  A  + ++M  +G+  D  +Y  +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C+MG    A   LS M +     D    + +I   C  G     +  F    EM+ K
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS---EMLEK 325

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PNV+T+  +IDG C  G    A RL   ++  +   P+V T+ A+IS   KE K+  
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFE 384

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE L + M  + + P+T TY S+IYG CK   F+ A  + DLM     +P++  +N IID
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             C+  RV E  +LL++  +R L A+  TY  L+    +      A  LF  M+  G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D      L+  FC  +K++E+ + F+    + +      Y  +I G  +   +  A   F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             +   G  PD  TY  +ISG C +S + +A   +  M   G  P   T  TL     K 
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 591 GD 592
           G+
Sbjct: 621 GE 622



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 193/398 (48%), Gaps = 8/398 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   ++G  K   +++ +M    +       + ++   C+ G    A+ +F EM  +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  +C  GR ++A R L  M++R    D  T   LI+A   +G    + 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLF 383

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+ +   P+  T+  +I G CK    + A  +F  L+ S    P+V T+  +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTI 438

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC+ ++++    LL  +  +GL+ NT TY +LI+G C+V N   A DL   M   G 
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N ++ G C+  +++EA EL +     ++  D + Y I++    K ++  +A  
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+  Y  +I+ FC +  + ++   F +    G  P   TY ++I G L
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + G I  +++    M   G + D  T       +C+ S
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 224/518 (43%), Gaps = 55/518 (10%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N+V+G+   +   + A  ++ +M  R +  +  S+ +++  +C   +++ +      +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 252 RGAILDNATLTLLITAFC----------------DKGFRGSIKQAFELLEEMVRKGWKPN 295
            G   D  T   L+   C                + GF     +A  L ++MV  G  P 
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----EAVALFDQMVEIGLTPV 225

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V T   LI+GLC +G   +A  L  K+V       +V TY  +++G CK      A  LL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            +M+E  + P+   Y+++I   CK G+   A  L   M ++G  PN++ YN +IDG C  
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL---------------- 459
           GR  +A  LL+   +RE+  D +T+  L+S  +K+ +  +A  L                
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 460 ------FCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                 FC+         M     +PD+  + T+I  +CR K++ E  +  +E    GL 
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
               TY ++I G+    N+++A   FQ M   G  PD IT   L+ G C+  KL+EA + 
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD---KKLWIRTVNTLIRKLCS 621
           +E +    I    V    + +  CK      A  +  SL     +  ++T N +I   C 
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           +  +  A + FHK+       D  +   L   C ++ +
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 152/347 (43%), Gaps = 12/347 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR  +   ++ +M    +     T N ++  + + G +  AE++ DEM  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           R +  D  +Y  M+  +C+  R  +A      M D  A  D  T   +I  +C       
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYCRAK---R 447

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +  +LL E+ R+G   N  T+  LI G C+      A  LF +++ S    P+  T  
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCN 506

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+C+ EK+  A  L E ++   +  +T  Y  +I+G CK    + A+DL   +   
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN +I G C K  + +A  L  K      + D  TY  L+   LK  E  ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAA--FCRQKKMKESEKFFQEAITA 501
           + L   M   G + D  A+T  +A    CR    +  E + +  I  
Sbjct: 627 IELISEMRSNGFSGD--AFTIKMAEEIICRVSDEEIIENYLRPKING 671



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 31/303 (10%)

Query: 347 KMNRAEMLLERMKEQGL--LPNTNTYT------SLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++N   ++  R+ E+G   LP+    T       L  G     + + A D  D M +   
Sbjct: 43  RLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRP 102

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
                  N +I    +  R   A  L +K   R +  +  ++ IL+       +   +L 
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F ++ K G  PD+  + TL+   C + ++ E+   F                    GY+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYM 202

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
            +     AV  F +M +IG  P  IT+  LI+GLC + ++ EA      M+GKG+    V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  T+    CK GD+ +A+ +L  +++   K  +   + +I +LC +     A   F ++
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 636 LGK 638
           L K
Sbjct: 323 LEK 325


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 217/433 (50%), Gaps = 8/433 (1%)

Query: 154 EVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
           +V+ C  ++  F  + ++++   ++  +  +G P + +  N V+   C+   V++A +V 
Sbjct: 111 DVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFA-YNAVISGFCKADRVDHASKVL 169

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D M  RG   D  +Y +++  +C  GR+  A R +  +L         T T+LI A   +
Sbjct: 170 DRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQ 229

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G    I +A +LL+EM+ +G +P+ YT+ V+++G+CK+G  ++AF  FL  +  +     
Sbjct: 230 G---GIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFE-FLSRISKNGCVAG 285

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TY  ++     E K    E L+  M  +G  PN  TY++LI   C+ G  + A +++ 
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLK 345

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           +M ++   P+ Y+Y+ +I  LC++G+V  A E L          D ++Y  +L+   K  
Sbjct: 346 VMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG 405

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +AL +F ++ + G  P+  +Y TL  A         +     E ++ G+ P + TY 
Sbjct: 406 NADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYN 465

Query: 512 SMICGYLRDGNISSAVKYFQRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           S+I    RDG +  A++    M +   C P  I+Y  ++ GLCK  ++ +A +   +M+ 
Sbjct: 466 SLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525

Query: 571 KGISPCEVTRVTL 583
           +G  P E T   L
Sbjct: 526 EGCLPNETTYTLL 538



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 218/440 (49%), Gaps = 13/440 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           TLNR    +C+    + +      M  RG   D      ++  +  M ++ +A + +  +
Sbjct: 83  TLNR----SCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME-I 137

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L++    D      +I+ FC K  R  +  A ++L+ M ++G++P+V T+ +LI   C +
Sbjct: 138 LEKHGKPDVFAYNAVISGFC-KADR--VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGR 194

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  + A R+  +L++ DN KP V TYT +I     +  ++ A  LL+ M  +GL P+  T
Sbjct: 195 GRLDLALRVMDQLLK-DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYT 253

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y  ++ G CK G  +RA++ +  + K GC   +  YN ++  L  +G+ +   +L+    
Sbjct: 254 YNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML 313

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +  + + ITY+ L++   +  +  +A  +   M +  L PD ++Y  LI+A CR+ K+ 
Sbjct: 314 VKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVD 373

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +F  + I+ G  P   +Y S++    ++GN   A+  F+++ ++GC P+  +Y  L 
Sbjct: 374 LAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLF 433

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII--LESLDK 605
             L        A      M+  GI P E+T  +L    C+ G  D A  +++   ES   
Sbjct: 434 GALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC 493

Query: 606 KLWIRTVNTLIRKLCSEKRV 625
           +  + + NT++  LC  +R+
Sbjct: 494 QPTVISYNTVLLGLCKVQRI 513



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 180/369 (48%), Gaps = 5/369 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        ++ +F   GRL     ++ ++  +       T   ++      G ++ A 
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           ++ DEM +RG+  D  +Y ++V   C+ G +  A  +LS +   G +   +T  +L+   
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            ++   G  +   +L+ +M+ KG +PN  T++ LI  LC+ G  ++A +  LK+++    
Sbjct: 297 LNE---GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEA-KNVLKVMKEKAL 352

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+ ++Y  +IS  C+E K++ A   L+ M   G LP+  +Y S++   CK GN + A +
Sbjct: 353 APDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALN 412

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + +G+ GC PN  +YN +   L   G    A  ++ +     +  D+ITY  L+S   
Sbjct: 413 IFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLC 472

Query: 449 KQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +     QA+ L   M ++    P + +Y T++   C+ +++ ++ +     +  G  P +
Sbjct: 473 RDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNE 532

Query: 508 ETYTSMICG 516
            TYT +I G
Sbjct: 533 TTYTLLIQG 541



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 38/301 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G L   F  +  ++ NG     ST N ++      G  EY E++  +M  +G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++ A CR G++ EA   L  M ++    D  +   LI+A C +G    + 
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREG---KVD 373

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---------------- 322
            A E L++M+  G  P++ ++  ++  LCK G  ++A  +F KL                
Sbjct: 374 LAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLF 433

Query: 323 ------------------VRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGL 363
                             + S+   P+  TY ++IS  C++  +++A E+L++  + +  
Sbjct: 434 GALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC 493

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P   +Y +++ G CKV     A +++  M  EGC PN   Y  +I G+   G   +A E
Sbjct: 494 QPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAME 553

Query: 424 L 424
           L
Sbjct: 554 L 554



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 21/272 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y +    L++ G +E   ++M  M               +++    G++ E  +++  M 
Sbjct: 289 YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMK 348

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
              L     + + ++   C  G V+ A E  D+M + G   D  SY  ++ + C+ G   
Sbjct: 349 EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNAD 408

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA      + + G   +  +   L  A    G +    +A  ++ EM+  G  P+  T+ 
Sbjct: 409 EALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK---IRALGMILEMLSNGIDPDEITYN 465

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            LI  LC+ G  ++A  L + +  S+  +P V +Y  ++ G CK +++  A  +L  M  
Sbjct: 466 SLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +G LPN  TYT LI G   +G     YD M+L
Sbjct: 526 EGCLPNETTYTLLIQG---IGFAGWRYDAMEL 554



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 86/240 (35%), Gaps = 50/240 (20%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y    T+L  +G  + A  V++ M               +S+    G++      + +M 
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 181 NNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
           + G LP I S  N ++   C+ G  + A  +F+++   G   +A SY  +  A    G  
Sbjct: 384 SGGHLPDILS-YNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS----------------------- 276
             A   +  ML  G   D  T   LI+  C  G                           
Sbjct: 443 IRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNT 502

Query: 277 ----------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                     I  A E+L  MV +G  PN  T+T+LI G+   GW   A  L   LV  D
Sbjct: 503 VLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMD 562


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 234/520 (45%), Gaps = 12/520 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++ S     R +E   MV  M   G    P + S  N V+    + G V  A  + +EM 
Sbjct: 233 VIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS-FNTVIHGFFKQGEVSKACNLINEMV 291

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            +GV  D  +Y  +V A C+   + +A+  L  M+D+G   D  T T +I  +      G
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGY---SCSG 348

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             K++ ++  +M  KG  P + T    +  LCK G ++ A  +F + + +  + P++ +Y
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIF-QYMTTKGHMPDLVSY 407

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + ++ GY  E +      L   M ++G++ N + +  LI  H K G  + A  +   M  
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P++  Y+ +I   C+ GR+ +A E   +     L+ + + Y  L+       +  +
Sbjct: 468 QGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVK 527

Query: 456 ALGLFCRMVKAGL-NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A  L   M+  G+  P+I  ++++I + C + ++ ++   F   I  G  PT  T+ S+I
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLI 587

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   G +  A      M  +G  PD +TY  L+SG CK  K+D+    +  M+ K + 
Sbjct: 588 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVK 647

Query: 575 PCEVT-RVTLAYEYCKQGDSATAMIILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  + L   +     SA   +  E +D    + I T   L++ LC       A   
Sbjct: 648 PTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 707

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
           FHKL   D   D   L  + NA Y+  +    +DL   I+
Sbjct: 708 FHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIS 747



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 222/475 (46%), Gaps = 8/475 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  KE   M  +MT+ GL     T N  +   C+ G  + AEE+F  M  +G   D  SY
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSY 407

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  Y   GR  + +    +M D+G + +     +LI+A      RG + +A  +  E
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAK---RGMMDEAMLVFTE 464

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G +P+V T++ LI   C+ G    A   F +++ S   +PN   Y ++I G+C   
Sbjct: 465 MQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI-SIGLEPNTVVYHSLIHGFCMHG 523

Query: 347 KMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            + +A+ L+  M  +G+  PN   ++S+I+  C  G    A+D+ +L+   G  P I  +
Sbjct: 524 DLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTF 583

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N++IDG C  G++++A+ +L       ++ D +TY  L+S + K  +    L LF  M+ 
Sbjct: 584 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLH 643

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             + P    Y+ ++       +   ++K F E I +G     +TY  ++ G  R+     
Sbjct: 644 KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 703

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+  F ++  + C  D      +I+ L K  + +EA   + ++   G+ P   T   + +
Sbjct: 704 AITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIH 763

Query: 586 EYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLG 637
              K+G    A  +  S++K       R +N +IR L  +  +  A  +  K+ G
Sbjct: 764 NLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 818



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 211/466 (45%), Gaps = 27/466 (5%)

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRL 169
           G   F  FM       +SL  +G  + A E+ Q M +                +A  GR 
Sbjct: 368 GIVTFNSFM-------SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRF 420

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
            +  ++   M + G+       N ++    + G+++ A  VF EM  +GV  D  +Y  +
Sbjct: 421 ADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTL 480

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           + A+CRMGR+ +A    S M+  G   +      LI  FC     G + +A EL+ EM+ 
Sbjct: 481 ISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC---MHGDLVKAKELVSEMMS 537

Query: 290 KGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           KG  +PN+   + +I  LC +G    A  +F  LV     +P + T+ ++I GYC   KM
Sbjct: 538 KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF-NLVIHIGDRPTIVTFNSLIDGYCLVGKM 596

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A  +L+ M   G+ P+  TY +L+ G+CK G  +    L   M  +   P    Y+ +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           +DGL   GR   A ++  +        D  TY ILL    +   T +A+ LF ++     
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 716

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
             DI    T+I A  + ++ +E+   F    T+GL P   TY  MI   L++G++  A  
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADT 776

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            F  M + GCAP +     +I  L ++  + +A  +   + G  IS
Sbjct: 777 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 822



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 219/487 (44%), Gaps = 81/487 (16%)

Query: 234 CRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           C   R  EA D  L  M D G + +  +   +I + C        ++A ++++ M ++G 
Sbjct: 202 CHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDS---RSQEALDMVQRMAKEGG 258

Query: 293 K--PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           +  P+V +   +I G  K+G   KA  L  ++V+    +P+V TY +++   CK   M++
Sbjct: 259 RCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQK-GVEPDVVTYNSIVDALCKARAMDK 317

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE++L +M ++G+ P+  TYT++I+G+   G+++ +  +   M  +G  P I  +N+ + 
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILL-------------------------- 444
            LCK GR ++A E+ +    +    D ++Y+ILL                          
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437

Query: 445 ---------SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
                    S H K+    +A+ +F  M   G+ PD+  Y+TLI+AFCR  ++ ++ + F
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497

Query: 496 QEAITAGLFPTKETYTSMICGY------------------------------------LR 519
            + I+ GL P    Y S+I G+                                      
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCN 557

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G +  A   F  +  IG  P  +T+ +LI G C   K+++A    ++M+  GI P  VT
Sbjct: 558 EGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 617

Query: 580 RVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLL 636
             TL   YCK G     +I+  E L KK+   TV  + ++  L    R   A   FH+++
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677

Query: 637 GKDQNVD 643
                VD
Sbjct: 678 DSGTAVD 684


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 265/595 (44%), Gaps = 58/595 (9%)

Query: 120  FYWAIGFAK--FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI 177
            +Y   G+ K   +HF+ +Y      L++N     A      ++ +F   G + E      
Sbjct: 514  YYCKAGYVKEALKHFVDIY---RRGLVANPVIHNA------LLHAFYREGMITEAEHFRQ 564

Query: 178  EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
             M+   +   + + NR++   C  G +  A  V+D+M   G   +  +Y+ ++   C+ G
Sbjct: 565  YMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGG 624

Query: 238  RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
             + +A +++S +LD    +D  T   L+   C  G   ++ +A +L E+M++    P+++
Sbjct: 625  HLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYG---TLDEALDLCEKMIKNNCLPDIH 681

Query: 298  THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT--------------------- 336
            T+T+L+ G C+KG    A  + L+++      P+   YT                     
Sbjct: 682  TYTILLSGFCRKGKILPAL-VILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHE 740

Query: 337  ---------------AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
                           ++++GY K   +N  + ++  M +  + PN+ +Y  L++G+ K G
Sbjct: 741  IICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 800

Query: 382  NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             F ++  L   M ++G  P+   Y  +I GL + G +  A + L+K     +  D++ + 
Sbjct: 801  QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            IL++   ++++   AL +F  M    ++P    ++ +I    R+  +  S K   E +  
Sbjct: 861  ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920

Query: 502  GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            GL P    Y +++    R G I  A +  + M  IG  P  +   ++I GLC+  KL+EA
Sbjct: 921  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980

Query: 562  CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRK 618
               + SM+  G+ P   T  TL +  CK+   A A+    ++E    ++ + + N LI  
Sbjct: 981  VIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITG 1040

Query: 619  LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
            LC +K +  A   + ++  K    +  +   L  A Y +    N   L  D+ +R
Sbjct: 1041 LCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEER 1095



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 248/540 (45%), Gaps = 69/540 (12%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
            SL +NG F +A +++Q M S                 ++N      + T N ++    +
Sbjct: 234 NSLCTNGEFRKAEDMLQKMKSC---------------HISN------SVTYNTILHWYVK 272

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G  + A  V ++M    V AD  +Y +M+   CR+ R T A   L  M       D  T
Sbjct: 273 KGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECT 332

Query: 261 LTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              LI  F    FR G I  A  +   M+R+   P+V T+T +IDG C+    +KA  + 
Sbjct: 333 YNTLINGF----FREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSI- 387

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++     P+  TY+A+++GYCK   +  A  L+E +K +G+  N    T LI G C+
Sbjct: 388 LSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQ 447

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           VG   +A  ++  M ++G  P++  Y+A+I+G+C+  ++ E  E+L +  +  +  + + 
Sbjct: 448 VGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVL 507

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGL--NPDIHAYTTLIAAFCRQKKMKESEKF--- 494
           YT L+  + K    K+AL  F  + + GL  NP IH    L+ AF R+  + E+E F   
Sbjct: 508 YTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIH--NALLHAFYREGMITEAEHFRQY 565

Query: 495 --------------------------------FQEAITAGLFPTKETYTSMICGYLRDGN 522
                                           + + +  G  P   TY +++ G  + G+
Sbjct: 566 MSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGH 625

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A ++   +  I  A D  T+ AL+ G+C+   LDEA    E MI     P   T   
Sbjct: 626 LVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTI 685

Query: 583 LAYEYCKQGDSATAMIILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
           L   +C++G    A++IL+  L+K +   TV    L+  L +E +V  A+  FH+++ K+
Sbjct: 686 LLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKE 745



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 259/553 (46%), Gaps = 23/553 (4%)

Query: 86  LNLQIDIDSLTHEQAITVVASLANEAGSMVAL--SFFYWAIGFAKFRH-----FMRLYI- 137
           + + I I +  H QA++V+  LA    S  A+  S       F    H      ++ Y+ 
Sbjct: 109 MAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRTISRFDPTNHVVFELLVKAYVK 168

Query: 138 -------VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITST 190
                    A   + +  F+ +      ++++  E G  K  +  + E      PL  +T
Sbjct: 169 ERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTT 228

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++   C  G    AE++  +M +  + +++ +Y  ++  Y + GR   A   L  M 
Sbjct: 229 CNILLNSLCTNGEFRKAEDMLQKMKSCHI-SNSVTYNTILHWYVKKGRFKAALCVLEDME 287

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
                 D  T  ++I   C +  R +  +AF LL+ M +    P+  T+  LI+G  ++G
Sbjct: 288 RDSVQADVYTYNIMIDKLC-RIKRST--RAFLLLKRMRKDDLTPDECTYNTLINGFFREG 344

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               A  +F  ++R  N  P+V TYT MI GYC+  ++++A  +L  M+  G++P+  TY
Sbjct: 345 KINHARYVFNHMLRQ-NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTY 403

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           ++L+ G+CKV     A  LM+ +   G T N      +IDG C+ G + +A ++LK  F+
Sbjct: 404 SALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFE 463

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             +  D ITY+ L++   + A+  +   +  RM K+G+ P+   YTTLI  +C+   +KE
Sbjct: 464 DGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKE 523

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + K F +    GL      + +++  + R+G I+ A  + Q M+++  + D++++  +I 
Sbjct: 524 ALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIID 583

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES-LDKKLWI 609
             C +  +  A   Y+ M+  G SP   T   L    C+ G    A   +   LD    I
Sbjct: 584 SYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAI 643

Query: 610 --RTVNTLIRKLC 620
             +T N L+  +C
Sbjct: 644 DEKTFNALLLGIC 656



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 220/478 (46%), Gaps = 21/478 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+     I R    F ++  M  + L     T N ++      G + +A  VF+ M  + 
Sbjct: 301 MIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQN 360

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +    ++Y  M+  YCR  R+ +A   LS M   G +    T + L+  +C     G   
Sbjct: 361 LVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGP-- 418

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L+E++  +G   N    T+LIDG C+ G   KA +  LK +  D   P+V TY+A+
Sbjct: 419 -AIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKA-KQILKSMFEDGIDPDVITYSAL 476

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C+  KM+  + +L RM++ G+LPN   YT+LI  +CK G  + A      + + G 
Sbjct: 477 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGL 536

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N   +NA++    ++G + EA    +   +  +  D +++  ++  +  +     A  
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFS 596

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  MV+ G +P++  Y  L+   C+   + ++ +F    +       ++T+ +++ G  
Sbjct: 597 VYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGIC 656

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R G +  A+   ++M +  C PD  TY  L+SG C++ K+  A    + M+ KG+ P  V
Sbjct: 657 RYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTV 716

Query: 579 TRVTL-------------AYEY----CKQGDSATAMIILESLDKKLWIRTVNTLIRKL 619
               L             +Y +    CK+G  A  +     ++  L  R VNT+ R +
Sbjct: 717 AYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMM 774



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 161/337 (47%), Gaps = 4/337 (1%)

Query: 204  VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            V   + +  +M    V  +++SY +++  Y + G+ +++      M+ +G   DN T  L
Sbjct: 767  VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRL 826

Query: 264  LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            LI    + G    I  A + LE+MV +G  P+     +LI    +K     A ++F   +
Sbjct: 827  LILGLSECGL---IDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVF-NCM 882

Query: 324  RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +  +  P+  T++AMI+G  ++  ++ +  +L  M + GL PN   Y +L+   C+VG  
Sbjct: 883  KWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 942

Query: 384  ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            +RA+ L + M   G  P   A ++II GLC+ G+++EA  +     +  +     T+T L
Sbjct: 943  DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTL 1002

Query: 444  LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            +    K+++   AL L   M    L  D+ +Y  LI   C+ K + ++   + E  + GL
Sbjct: 1003 MHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGL 1062

Query: 504  FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +P   TY ++       G + +  +  + + + G  P
Sbjct: 1063 WPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 11/487 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G   + G          EM  R +C D +++ +++   C  G   ++   +  M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   ++  +C KG     K A ELL+ M  KG   +V T+ +LI  LC+ 
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKG---RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
               K + L L+ +R     PN  TY  +I+G+  E K+  A  LL  M   GL PN  T
Sbjct: 277 NRIAKGY-LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI GH   GNF+ A  +  +M  +G TP+  +Y  ++DGLCK      A     +  
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +   +ITYT ++    K     +A+ L   M K G++PDI  Y+ LI  FC+  + K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++        GL P    Y+++I    R G +  A++ ++ M   G   D+ T+  L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---K 606
           + LCK  K+ EA +F   M   GI P  V+   L   Y   G+   A  + + + K    
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----L 662
               T  +L++ LC    +  A  F   L      VD V    L  A  +S   A    L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635

Query: 663 FSDLSQR 669
           F ++ QR
Sbjct: 636 FGEMVQR 642



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 14/509 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++      G  KE   M   M   GL     +   ++   C+    + A   + 
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   GVC    +Y  M+   C+ G + EA   L+ M   G   D  T + LI  FC  G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                K A E++  + R G  PN   ++ LI   C+ G  ++A R++  ++   + + + 
Sbjct: 453 ---RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +++  CK  K+  AE  +  M   G+LPNT ++  LI G+   G   +A+ + D 
Sbjct: 510 -TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K G  P  + Y +++ GLCK G ++EA + LK         D + Y  LL+   K   
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYT 511
             +A+ LF  MV+  + PD + YT+LI+  CR+ K   +  F +EA   G + P K  YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             + G  + G   + + + ++M+ +G  PD +T  A+I G  +  K+++       M  +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILES------LDKKLWIRTVNTLIRKLCSEKRV 625
              P   T   L + Y K+ D +T+ ++  S      L  KL   T ++L+  +C    +
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL---TCHSLVLGICESNML 805

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +        + +   VDR +   L + C
Sbjct: 806 EIGLKILKAFICRGVEVDRYTFNMLISKC 834



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 220/471 (46%), Gaps = 19/471 (4%)

Query: 143 LISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLI 187
           L + G+FE++  +MQ M  S               + + GR K    ++  M + G+   
Sbjct: 203 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 262

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             T N ++   C    +     +  +M  R +  +  +Y  ++  +   G+V  A + L+
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ML  G   ++ T   LI     +G   + K+A ++   M  KG  P+  ++ VL+DGLC
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEG---NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K    + A   ++++ R+      + TYT MI G CK   ++ A +LL  M + G+ P+ 
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY++LI G CKVG F+ A +++  + + G +PN   Y+ +I   C+ G ++EA  + + 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                   D  T+ +L++   K  +  +A      M   G+ P+  ++  LI  +    +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
             ++   F E    G  PT  TY S++ G  + G++  A K+ + ++ +  A D + Y  
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           L++ +CK   L +A   +  M+ + I P   T  +L    C++G +  A++
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 230/526 (43%), Gaps = 43/526 (8%)

Query: 151  RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
            R H     +V+S  + G++ E    +  MT++G+   T + + ++      G    A  V
Sbjct: 506  RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565

Query: 211  FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
            FDEM   G      +Y  ++   C+ G + EA+++L ++    A +D      L+TA C 
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----- 325
             G   ++ +A  L  EMV++   P+ YT+T LI GLC+KG T  A  LF K   +     
Sbjct: 626  SG---NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVL 681

Query: 326  -----------------------------DN--YKPNVHTYTAMISGYCKEEKMNRAEML 354
                                         DN  + P++ T  AMI GY +  K+ +   L
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 355  LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            L  M  Q   PN  TY  L++G+ K  +   ++ L   +   G  P+    ++++ G+C+
Sbjct: 742  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801

Query: 415  KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
               ++   ++LK    R ++ D+ T+ +L+S+     E   A  L   M   G++ D   
Sbjct: 802  SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861

Query: 475  YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
               +++   R  + +ES     E    G+ P    Y  +I G  R G+I +A    + M 
Sbjct: 862  CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921

Query: 535  QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                 P N+   A++  L K  K DEA      M+   + P   +  TL +  CK G+  
Sbjct: 922  AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981

Query: 595  TAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             A+   +++ +   KL + + N LI  LC++  + +A   + ++ G
Sbjct: 982  EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 6/375 (1%)

Query: 145  SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
            + GN      +  C V    + G+ K G     +M N G      T N ++     +G +
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 205  EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
            E   ++  EM  +    + ++Y +++  Y +   V+ +     +++  G + D  T   L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 265  ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
            +   C+      ++   ++L+  + +G + + YT  +LI   C  G    AF L +K++ 
Sbjct: 796  VLGICESNM---LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL-VKVMT 851

Query: 325  SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
            S     +  T  AM+S   +  +   + M+L  M +QG+ P +  Y  LI G C+VG+ +
Sbjct: 852  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 385  RAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
             A+ +  +++  + C PN+ A +A++  L K G+  EA  LL+   + +L     ++T L
Sbjct: 912  TAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 444  LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            +    K     +AL L   M   GL  D+ +Y  LI   C +  M  + + ++E    G 
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030

Query: 504  FPTKETYTSMICGYL 518
                 TY ++I G L
Sbjct: 1031 LANATTYKALIRGLL 1045



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 198/540 (36%), Gaps = 121/540 (22%)

Query: 131  HFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSM 175
            HF   + V  TSL   G    A E M+CM S                +   G   + FS+
Sbjct: 508  HFT--FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565

Query: 176  VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
              EMT  G      T   ++   C+ G +  AE+    + A     D   Y  ++ A C+
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625

Query: 236  MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------FRGSI----- 277
             G + +A      M+ R  + D+ T T LI+  C KG              RG++     
Sbjct: 626  SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685

Query: 278  ---------------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                           K      E+M   G  P++ T   +IDG  + G  EK   L L  
Sbjct: 686  MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL-LPE 744

Query: 323  VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT--------------- 367
            + + N  PN+ TY  ++ GY K + ++ + +L   +   G+LP+                
Sbjct: 745  MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 368  --------------------NTYTSLIYGHCKVGNFERAYDLMDLM-------------- 393
                                 T+  LI   C  G    A+DL+ +M              
Sbjct: 805  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 394  ---------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
                                  K+G +P    Y  +I+GLC+ G ++ A+ + ++    +
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 433  LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            +    +  + ++    K  +  +A  L   M+K  L P I ++TTL+   C+   + E+ 
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 493  KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            +        GL     +Y  +I G    G+++ A + ++ M   G   +  TY ALI GL
Sbjct: 985  ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 5/364 (1%)

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G +   F   +   R  N  P+V  Y  +I  Y +E  +  +  +   M   G  P+  T
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT 160

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             +++    K G     +  +  M K    P++  +N +I+ LC +G  +++  L++K  
Sbjct: 161 CNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME 220

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +       +TY  +L  + K+   K A+ L   M   G++ D+  Y  LI   CR  ++ 
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +     ++     + P + TY ++I G+  +G +  A +    M   G +P+++T+ ALI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
            G   +    EA + +  M  KG++P EV+   L    CK  +   A      + +    
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           +   T   +I  LC    +  A +  +++     + D V+ +AL N   +  ++    ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 667 SQRI 670
             RI
Sbjct: 461 VCRI 464


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 226/469 (48%), Gaps = 22/469 (4%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  +   G+     S+ +++   C +G + EA    S M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D+ T  +L   F      G I  A+E++ +M+ KG  P+V T+T+L+ G C+ 
Sbjct: 284 NKHGVEPDSVTYNILAKGF---HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340

Query: 310 GWTEKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           G  +    L LK + S  ++ N +   + M+SG CK  +++ A  L  +MK  GL P+  
Sbjct: 341 GNIDMGLVL-LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            Y+ +I+G CK+G F+ A  L D M  +   PN   + A++ GLC+KG + EA  LL   
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                  D + Y I++  + K    ++AL LF  +++ G+ P +  + +LI  +C+ + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+ K        GL P+  +YT+++  Y   GN  S  +  + M   G  P N+TY  +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 549 ISGLCK-----------QSKLDEAC-QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             GLC+           + ++ E C Q    M  +GI P ++T  T+    C+    + A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            + LE +  +       T N LI  LC    +  A  F + L  ++QNV
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL--QEQNV 686



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 24/512 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S + ++G +    S    +   GL     + N ++   C +G +  A E+  +M   G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y ++   +  +G ++ A   +  MLD+G   D  T T+L+   C     G+I 
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ---LGNID 344

Query: 279 QAFELLEEMVRKGWKPN-VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
               LL++M+ +G++ N +   +V++ GLCK G  ++A  LF ++ ++D   P++  Y+ 
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSI 403

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K + A  L + M ++ +LPN+ T+ +L+ G C+ G    A  L+D +   G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            T +I  YN +IDG  K G ++EA EL K   +  +     T+  L+  + K     +A 
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG- 516
            +   +   GL P + +YTTL+ A+      K  ++  +E    G+ PT  TY+ +  G 
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583

Query: 517 -----------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
                       LR+       +  + M   G  PD ITY  +I  LC+   L  A  F 
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643

Query: 566 ESMIGKGISPCEVTRVTL-----AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
           E M  + +     T   L      Y Y ++ DS   +  L+  +  L      TLI+  C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADS--FIYSLQEQNVSLSKFAYTTLIKAHC 701

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            +    MA   FH+LL +  NV     +A+ N
Sbjct: 702 VKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 37/343 (10%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N +T++ ++DGLC++   E A  LFL+     +  P+V ++ +++SGYCK   ++ A+  
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              + + GL+P+  ++  LI G C VG+   A +L   M K G  P+   YN +  G   
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
            G +  A+E+++    + L  D ITYTIL                               
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364

Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                LS   K     +AL LF +M   GL+PD+ AY+ +I   C+  K   +   + E 
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   T+ +++ G  + G +  A      +   G   D + Y  +I G  K   +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +EA + ++ +I  GI+P   T  +L Y YCK  + A A  IL+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 200/406 (49%), Gaps = 21/406 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
           ++G +  G  ++ +M + G  L  S +   V ++  C+ G ++ A  +F++M A G+  D
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFEL-NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y +++   C++G+   A      M D+  + ++ T   L+   C KG    + +A  
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM---LLEARS 454

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL+ ++  G   ++  + ++IDG  K G  E+A  LF K+V      P+V T+ ++I GY
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGY 513

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + +  A  +L+ +K  GL P+  +YT+L+  +   GN +   +L   M  EG  P  
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573

Query: 403 YAYNAIIDGLCKKGRVQEAYELLK-KAFQ------RELQA-----DKITYTILLSEHLKQ 450
             Y+ I  GLC+  + +    +L+ + F+      R++++     D+ITY  ++ ++L +
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII-QYLCR 632

Query: 451 AETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
            +      +F  ++K+  L+     Y  LI + C    +++++ F        +  +K  
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           YT++I  +   G+   AVK F ++   G       Y A+I+ LC++
Sbjct: 693 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 1/274 (0%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N HTY+ ++ G C+++K+  A + L   + + + P+  ++ S++ G+CK+G  + A    
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + K G  P++Y++N +I+GLC  G + EA EL     +  ++ D +TY IL       
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKET 509
                A  +   M+  GL+PD+  YT L+   C+   +       ++ ++ G    +   
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            + M+ G  + G I  A+  F +M   G +PD + Y  +I GLCK  K D A   Y+ M 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            K I P   T   L    C++G    A  +L+SL
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 20/392 (5%)

Query: 137 IVCATSLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRV 194
           +V    ++S G FE  + ++ C  M+S   + GR+ E  S+  +M  +GL       + V
Sbjct: 347 LVLLKDMLSRG-FE-LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           +   C+LG  + A  ++DEMC + +  ++ ++  +++  C+ G + EA   L +++  G 
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
            LD     ++I  +   G    I++A EL + ++  G  P+V T   LI G CK     +
Sbjct: 465 TLDIVLYNIVIDGYAKSG---CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A R  L +++     P+V +YT ++  Y         + L   MK +G+ P   TY+ + 
Sbjct: 522 A-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580

Query: 375 YGHCKVGN------------FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            G C+               FE+    +  M  EG  P+   YN II  LC+   +  A+
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
             L+    R L A   TY IL+         ++A      + +  ++    AYTTLI A 
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           C +   + + K F + +  G   +   Y+++I
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 46/331 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L++MK+Q L  +T +Y S++Y      +F     + D+  KE    N + Y+ ++DGLC
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWDVY-KEIKDKNEHTYSTVVDGLC 198

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++ ++++A   L+ +  +++    +++  ++S + K      A   FC ++K GL P ++
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++  LI   C    + E+ +   +    G+ P   TY  +  G+   G IS A +  + M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318

Query: 534 NQIGCAPDNITY------------------------------------GALISGLCKQSK 557
              G +PD ITY                                      ++SGLCK  +
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI--RTVNT 614
           +DEA   +  M   G+SP  V    + +  CK G    A+ + + + DK++    RT   
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           L+  LC +  +  A      L+   + +D V
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIV 469


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 198/405 (48%), Gaps = 8/405 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C    V  A  +  +M   G   D  +   +V  +CR  RV++A   +  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++ G   D      +I + C       +  AF+  +E+ RKG +PNV T+T L++GLC  
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTK---RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
                A RL   +++     PNV TY+A++  + K  K+  A+ L E M    + P+  T
Sbjct: 239 SRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SL+ G C     + A  + DLM  +GC  ++ +YN +I+G CK  RV++  +L ++  
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           QR L ++ +TY  L+    +  +  +A   F +M   G++PDI  Y  L+   C   +++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++   F++     +     TYT++I G  + G +  A   F  ++  G  PD +TY  ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVT----RVTLAYEYCKQ 590
           SGLC +  L E    Y  M  +G+   + T     +TL+ E  K+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T  ++I  FC   F+ S+  A  +L +M++ G++P+  T   L++G C++     A 
Sbjct: 119 DLYTFNIVINCFC-CCFQVSL--ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            L  K+V    YKP++  Y A+I   CK +++N A    + ++ +G+ PN  TYT+L+ G
Sbjct: 176 SLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C    +  A  L+  M K+  TPN+  Y+A++D   K G+V EA EL ++  +  +  D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            +TY+ L++         +A  +F  MV  G   D+ +Y TLI  FC+ K++++  K F+
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    GL     TY ++I G+ + G++  A ++F +M+  G +PD  TY  L+ GLC   
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           +L++A   +E M  + +    VT  T+    CK G    A  +  SL  K     I T  
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 614 TLIRKLCSE 622
           T++  LC++
Sbjct: 475 TMMSGLCTK 483



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 206/408 (50%), Gaps = 14/408 (3%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E     +  +V+ F    R+ +  S+V +M   G        N ++   C+   V  A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           + F E+  +G+  +  +Y  +V   C   R ++A R LS M+ +    +  T + L+ AF
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    + +A EL EEMVR    P++ T++ L++GLC     ++A ++F  L+ S   
Sbjct: 271 VKNG---KVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF-DLMVSKGC 326

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             +V +Y  +I+G+CK +++     L   M ++GL+ NT TY +LI G  + G+ ++A +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M   G +P+I+ YN ++ GLC  G +++A  + +   +RE+  D +TYT ++    
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + ++A  LFC +   GL PDI  YTT+++  C +  + E E  + +    GL     
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           T        L DG+I+ + +  ++M   G AP  +    + SG+CK++
Sbjct: 507 T--------LSDGDITLSAELIKKMLSCGYAPSLLK--DIKSGVCKKA 544



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            NR++    +L   +    +  +M   G+  D  ++ +++  +C   +V+ A   L  ML
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
             G   D  T+  L+  FC    R  +  A  L+++MV  G+KP++  +  +ID LCK  
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR---RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
               AF  F ++ R    +PNV TYTA+++G C   + + A  LL  M ++ + PN  TY
Sbjct: 205 RVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           ++L+    K G    A +L + M +    P+I  Y+++++GLC   R+ EA ++      
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVS 323

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +   AD ++Y  L++   K    +  + LF  M + GL  +   Y TLI  F +   + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +++FF +    G+ P   TY  ++ G   +G +  A+  F+ M +     D +TY  +I 
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           G+CK  K++EA   + S+  KG+ P  VT  T+    C +G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 168/366 (45%), Gaps = 47/366 (12%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNV 332
           +  A +L  +MV+    P++     L+  + K    +    L  K+    +R+D Y    
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY---- 121

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +I+ +C   +++ A  +L +M + G  P+  T  SL+ G C+      A  L+D 
Sbjct: 122 -TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P+I AYNAIID LCK  RV +A++     F +E++                  
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD-----FFKEIE------------------ 217

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
                       + G+ P++  YT L+   C   +  ++ +   + I   + P   TY++
Sbjct: 218 ------------RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++  ++++G +  A + F+ M ++   PD +TY +L++GLC   ++DEA Q ++ M+ KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
                V+  TL   +CK       M +   + ++  +    T NTLI+       V  A 
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385

Query: 630 LFFHKL 635
            FF ++
Sbjct: 386 EFFSQM 391



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 38/245 (15%)

Query: 447 HLKQAETKQALGLFCRMVKA-----------------------------------GLNPD 471
            L+  +   A+ LF  MVK+                                   G+  D
Sbjct: 60  RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ +  +I  FC   ++  +     + +  G  P + T  S++ G+ R   +S AV    
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M +IG  PD + Y A+I  LCK  ++++A  F++ +  KGI P  VT   L    C   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
             + A  +L  + KK     + T + L+       +V  A   F +++    + D V+ +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 649 ALKNA 653
           +L N 
Sbjct: 300 SLVNG 304


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 254/585 (43%), Gaps = 69/585 (11%)

Query: 115 VALSFFYWAIGFA--KFRHFMRLYIVCATSLISNGNFERAHEVM----QCMVSSFAEIGR 168
           +AL F  W I     + +H   +Y + A  L+    ++ A  ++    Q  + S +  G 
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 151

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD---------------- 212
           L + + +      N +P   S  + ++ +  + G+++YA E F+                
Sbjct: 152 LMDTYPLC-----NSIP---SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNM 203

Query: 213 -------------------EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
                              EM  +G+C +  ++ +++   C  G + +A   L  M + G
Sbjct: 204 ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
            +    T   L+  +C K   G  K A EL++ M+ KG + +V T+ V ID LC    + 
Sbjct: 264 FVPTIVTYNTLLNWYCKK---GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSA 320

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           KA+ L LK +R +   PN  TY  +I+G+ KE K+  A  +   M +  L PN  TY +L
Sbjct: 321 KAY-LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I GHC VG+FE A  L+D M   G   N            + G V EA ++         
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLRLN------------EHGNVTEAMKVYAVMNCNGH 427

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
            AD  T  +L+S   +  +  +A    C M + GL P+   Y  +I  +        +  
Sbjct: 428 GADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFS 487

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
           FF + I  G  P+  TY S++ G  + GN+  A K+  R++ I  A D++ Y  L++  C
Sbjct: 488 FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 547

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--LWIRT 611
           K   L EA   ++ M+   + P   T  +L    C++G + TA+ +  +   +  L+   
Sbjct: 548 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 607

Query: 612 V--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
           V    L+  L        A  FF +++ K    D V+  A+ ++C
Sbjct: 608 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 652



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 203/447 (45%), Gaps = 26/447 (5%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G LK+  +++ +M  NG      T N ++   C+ G  + A E+ D M  +G+ AD  +Y
Sbjct: 247 GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 306

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            + +   C   R  +A   L  M       +  T   LI  F  +G  G   Q F    E
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN---E 363

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-------LKLVRSDNYKPNVHTYTAM- 338
           M +    PN  T+  LI G C  G  E+A RL        L+L    N    +  Y  M 
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMN 423

Query: 339 --------------ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                         +S  C++ K+  AE  L  M   GL+PN+ TY  +I G+  +G+  
Sbjct: 424 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 483

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A+   D M K G  P+ + Y +++ GLCK G + EA + L +        D + Y  LL
Sbjct: 484 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 543

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-L 503
           +E  K     +A+ LF +MV+  + PD + Y++L+   CR+ K   +   F  A+  G L
Sbjct: 544 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 603

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
           FP    YT ++ G  + G+  +A  +F+ M + G  PD + + A+I    ++ ++ +A  
Sbjct: 604 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 663

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQ 590
           F+ +M   G+ P   T   L + + K+
Sbjct: 664 FFSTMRWWGVCPNLATYNILLHGFSKK 690



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 195/428 (45%), Gaps = 25/428 (5%)

Query: 253 GAILDNATLTLLITAFCDKGFR-----GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
           GA++D   L   I +  D   R     G I  A E  E +   G+KP+VYT  +++  + 
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K   TE  + LF ++       PNV T+  +I+G C E  + +A  LL++M+E G +P  
Sbjct: 210 KDKRTELVWSLFREM-SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTI 268

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY +L+  +CK G ++ A +L+D M  +G   ++  YN  ID LC   R  +AY LLKK
Sbjct: 269 VTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 328

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +  +  +++TY  L++  +K+ +   A  +F  M K  L+P+   Y  LI   C    
Sbjct: 329 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 388

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            +E+ +       AGL   +             GN++ A+K +  MN  G   D+ T   
Sbjct: 389 FEEALRLLDHMEAAGLRLNEH------------GNVTEAMKVYAVMNCNGHGADHFTCNV 436

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-- 605
           L+S LC+  KL EA +F   M   G+ P  +T   +   Y   GD   A    + + K  
Sbjct: 437 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 496

Query: 606 -KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA-LKNACYESNKY--- 660
                 T  +L++ LC    +  A  F ++L      VD V     L   C   N +   
Sbjct: 497 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 556

Query: 661 ALFSDLSQ 668
           ALF  + Q
Sbjct: 557 ALFDKMVQ 564



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 226/512 (44%), Gaps = 49/512 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G++     +  EM+   L     T N ++G  C +G  E A  + D M A G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 219 V-------------------C----ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
           +                   C    AD  +  ++V + CR G++ EA+++L  M   G +
Sbjct: 404 LRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
            ++ T   +I  +   G  G    AF   ++M++ G  P+ +T+  L+ GLCK G   +A
Sbjct: 464 PNSITYDCIINGY---GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 520

Query: 316 FRLFLKLVRSDNYKP---NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
            +   +L    +Y P   +   Y  +++  CK   ++ A  L ++M +  +LP++ TY+S
Sbjct: 521 KKFLNRL----HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 576

Query: 373 LIYGHCKVGNFERAYDLMDL-MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           L+ G C+ G    A  L    MG+    PN   Y  ++DGL K G  + A+   ++  ++
Sbjct: 577 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 636

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
               D + +  ++    ++ +  +A   F  M   G+ P++  Y  L+  F +++ +   
Sbjct: 637 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 696

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN------------QIGCA 539
              +   +  G+FP K T+ S+I G  + G     VK   +M             + G  
Sbjct: 697 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVI 756

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P +  Y  LI+G+C+   +  A +  + M   G    EV    +       G +  AM++
Sbjct: 757 PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 816

Query: 600 LESLDKKLWIRTV---NTLIRKLCSEKRVGMA 628
           L+ + +   + T+    TL+ + C + ++  A
Sbjct: 817 LDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 848



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 217/524 (41%), Gaps = 33/524 (6%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +VSS    G+L E    +  M+  GL   + T + ++     +G    A   FD
Sbjct: 431 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 490

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G      +Y  ++   C+ G + EA ++L+ +      +D+     L+   C  G
Sbjct: 491 DMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSG 550

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
              ++ +A  L ++MV+    P+ YT++ L+ GLC+KG    A  LF   +      PN 
Sbjct: 551 ---NLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 607

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             YT ++ G  K      A    E M ++G  P+T  + ++I    + G   +A D    
Sbjct: 608 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 667

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  PN+  YN ++ G  KK  +     L     +  +  DK+T+  L+        
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI-------- 719

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
               LGL     K+G+ PD      L      +  M+ES     E +  G+ P    Y +
Sbjct: 720 ----LGL----SKSGI-PD------LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYIT 764

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  R G+I  A K    M  +G     +   A++ GL    K ++A    + M+   
Sbjct: 765 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 824

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMI---ILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
           + P   T  TL + +C+    A A+    ++E    KL +   N LI  +C+      A 
Sbjct: 825 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 884

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
             + ++  +D   +  + A L +A   +N       L +DL +R
Sbjct: 885 ELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 928



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 173/395 (43%), Gaps = 17/395 (4%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+ G +  A  +FD+M    V  D+ +Y  ++   CR G+   A       + 
Sbjct: 540 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 599

Query: 252 RGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           RG +  N  + T L+      G     K AF   EEM++KG  P+      +ID   ++G
Sbjct: 600 RGTLFPNHVMYTCLVDGLSKAGHP---KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 656

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
              KA   F   +R     PN+ TY  ++ G+ K++ + R   L   M  +G+ P+  T+
Sbjct: 657 QMMKA-NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 715

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKE------------GCTPNIYAYNAIIDGLCKKGRV 418
            SLI G  K G  +    L+  M  E            G  P    Y  +I+G+C+ G +
Sbjct: 716 HSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDI 775

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           Q A++L  +       + ++  + ++   L   +T+ A+ +   M++  L P I  +TTL
Sbjct: 776 QGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTL 835

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +  FCR  K+ E+ K        GL      Y  +I G   +G+ ++A + ++ M     
Sbjct: 836 MHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 895

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            P+  TY  L+  +   + L +  +    +  +G+
Sbjct: 896 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 930



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 6/197 (3%)

Query: 169 LKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++E   ++ EM  NG +P     +  + G+ C +G ++ A ++ DEM A G  +   +  
Sbjct: 740 MEESTVVLHEMLENGVIPKHAQYITLINGM-CRVGDIQGAFKLKDEMEALGFGSHEVAES 798

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            MV      G+  +A   L  ML    +   AT T L+  FC       I +A +L   M
Sbjct: 799 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA---KIAEALKLKGVM 855

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G K +V  + VLI G+C  G +  AF L+ ++ R  +  PN+ TY  ++        
Sbjct: 856 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM-RHRDLCPNITTYAVLVDAISAANN 914

Query: 348 MNRAEMLLERMKEQGLL 364
           + + E LL  ++E+GL+
Sbjct: 915 LIQGEKLLTDLQERGLI 931


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 246/497 (49%), Gaps = 9/497 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            ++S+F   G + E   ++  M  +  +P + +    V G+  + G ++ A  +  EM  +
Sbjct: 534  LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG-KAGRLDEAVSLLREMEKQ 592

Query: 218  GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            G      +Y  ++ ++ +  +  E+      M+ +G + D +T +L+I   C       +
Sbjct: 593  GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD---DV 649

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             QA ++   M  +G +P +  +  L+  L K    + A ++F +L  S +  P+   Y  
Sbjct: 650  DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES-SLVPDTFVYNI 708

Query: 338  MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            M++G  K  +++ A  L++ MK Q +LP+  TYTSL+ G  K G  E A+++   M +EG
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 398  CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              P++ AY +++D L K G++  A  + +   ++    D +TY+ L+    K+   ++A 
Sbjct: 769  HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 458  GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
              F   +  G  P++  Y++LI +F ++  +  + + F+E       P   TY +++ G 
Sbjct: 829  YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             + G ++ A K  + M ++GC PD +TY  LI G+ K   +DEA  +++ M  KGI P  
Sbjct: 889  AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948

Query: 578  VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            +T  +L     K      A  + +S++++ +   + T N LI  L    +V  AA+ FH+
Sbjct: 949  ITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008

Query: 635  LLGKDQNVDRVSLAALK 651
            +  K    D +++  +K
Sbjct: 1009 MKVKGCMPDGITIGIMK 1025



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 237/527 (44%), Gaps = 38/527 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           + V   +L+ +GN + A +    M               V+  A+ GRL+E   + +EM 
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
            N         N ++    + G  + A  +F EM  RG+  +  +Y +M+    + GR  
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-----KPN 295
           EA +    + ++GA+ D  T   LI      G  G + +   +++EMV KG      + +
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVL---GKGGQMDKVLAIIKEMVEKGGECIISRDS 501

Query: 296 VYTHTVLIDGLCKK-GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
              H   I+G  +   +    F+   ++           TY  ++S +     ++ A  L
Sbjct: 502 NAGHEGTIEGADRTVEYPSLGFKSLGEI-----------TYNTLMSAFIHNGHVDEAVKL 550

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           LE MK+   +P   TYT+L+ G  K G  + A  L+  M K+GC P++  Y++++    K
Sbjct: 551 LEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYK 610

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           + + +E+  L  +  ++   AD  TY+++++   K  +  QAL +F RM + G+ P +  
Sbjct: 611 RDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGN 670

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y TL+++  + +K+  + + F E   + L P    Y  M+ G ++   +  A K    M 
Sbjct: 671 YKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK 730

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
                PD  TY +L+ GL K  +L+EA   +  M  +G  P  V   +L     K G  +
Sbjct: 731 NQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLS 790

Query: 595 TAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGK 638
            A+II  ++ KK  +  V T   LI  L  E RV  A  FF   + K
Sbjct: 791 HALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISK 837



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 245/585 (41%), Gaps = 55/585 (9%)

Query: 107 LANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSL-----------ISNGNFERAHEV 155
           + N+    +A  FF WA     + H +  Y +    L           I    ++  H +
Sbjct: 156 VVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRI 215

Query: 156 ----MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
               +  ++ +F     +     +  +M + G    T+  N V+ +  + G    A  VF
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
            ++    +  DA ++++ V ++ R GR+  A   +  M+  G      T T+LI A    
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G   +I +A +    M      PNV T+T L++GL K G  E+A  +F+++ + +N  P+
Sbjct: 336 G---NIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM-KENNCSPD 391

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y  +I G  K  + + A  L + MK++GL+PN  TY  +I    K G    A+ L  
Sbjct: 392 AIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFH 451

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ----------------- 434
            + ++G  P+++ YN +ID L K G++ +   ++K+  ++  +                 
Sbjct: 452 DLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEG 511

Query: 435 ADK--------------ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           AD+              ITY  L+S  +      +A+ L   M K    P +  YTTL+ 
Sbjct: 512 ADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVD 571

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
              +  ++ E+    +E    G  P+  TY+S++  + +      ++  F  M + GC  
Sbjct: 572 GLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA 631

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D  TY  +I+ LCK   +D+A   +  M  +G+ P      TL     K      A+ I 
Sbjct: 632 DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF 691

Query: 601 ESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             L +   +      N ++  L    RV  A      +  K+QN+
Sbjct: 692 NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM--KNQNI 734



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 3/165 (1%)

Query: 155  VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
            V   ++ SF + G +     +  EM     P    T N ++    + G +  AE++ +EM
Sbjct: 845  VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904

Query: 215  CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               G   D  +Y +++    +MG V EA+ +   M ++G + D  T T LI +    G  
Sbjct: 905  EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL---GKV 961

Query: 275  GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              + +A EL + M  +G+ P+V T+ VLID L + G   +A  +F
Sbjct: 962  DKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 194/381 (50%), Gaps = 5/381 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G ++ AE V+ EM    V  DA  Y  M+  + R GR+ +    L  ++ R    + 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIE-LWELMGREXSQNV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +  +++      G    + +A  + E M + G+  +  T+ +L+DG CK G+  K+ R+
Sbjct: 60  VSFNIMMRGLFGNG---DVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L++        +   Y+AMI+G CKE K++ A  +L  M + G  PN + Y +LI G  
Sbjct: 117 -LEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFM 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            V  F+ A  +   MG   C+P +  YN +I+GLCK  R  EAY+L+K+  ++  +   I
Sbjct: 176 GVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+    +  + + AL L+ +++  GL PD+     LI   C   K + +   + + 
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM 295

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ +++ G+ +DG+I +A+  + R+ + G  PD ++Y   + GLC  S++
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRI 355

Query: 559 DEACQFYESMIGKGISPCEVT 579
             A  F +  + K I+P  +T
Sbjct: 356 SFAILFLQDALAKKIAPSIIT 376



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 165/367 (44%), Gaps = 5/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  + +EM      P+   +  +++G  + G  +    L+  + R      NV +
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRE--XSQNVVS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G      +++A  + E M + G + ++ TY  L+ G CK G   ++  ++++  
Sbjct: 62  FNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   + +AY+A+I+GLCK+ ++ EA  +L    +     +   Y  L++  +  ++  
Sbjct: 122 EKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFD 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ +F  M     +P +  Y TLI   C+ ++  E+    +E +  G  P   TY+ ++
Sbjct: 182 DAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLM 241

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +   +  A++ + ++   G  PD      LI GLC   K   A   Y  M     +
Sbjct: 242 KGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCA 301

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   + K GD   A+ I   + +      I + N  ++ LCS  R+  A LF
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILF 361

Query: 632 FHKLLGK 638
               L K
Sbjct: 362 LQDALAK 368



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  +   M +   +P+   YNA+++G  + GR+++  EL +    RE   + 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWE-LMGREXSQNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +++ I++       +  +A+ ++  M ++G   D   Y  L+  FC+   + +S +  + 
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  ++  +  AV     M + G  P+   Y  LI+G    SK
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            D+A + +  M     SP  VT                                 NTLI 
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVT--------------------------------YNTLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
            LC  +R   A     ++L K
Sbjct: 208 GLCKGERFAEAYDLVKEMLEK 228


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 220/488 (45%), Gaps = 33/488 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G++ + +++ +EM + G+P    T   V+   C+  L + AE VF +M   G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           V  +  +Y  ++  Y  +G+  E  R L  M   G   +  T   L+   C  G      
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 273 --------------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                      +G++ +  +LL  MV  G  PN +   +     
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K G  +KA  +F K+ R     P+  +Y A+I   CK  +++ AE+   +M  +G+ P+
Sbjct: 389 AKCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              ++SL+YG C V  +E+  +L   M   G  PNI  +N I+  LCK+GRV E   L+ 
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                 ++ D I+Y  L+  H       +A  L   MV  GL PD  +Y TL+  +C+  
Sbjct: 508 SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAG 567

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++  +   F++ ++ G+ P   TY +++ G  +    S A + +  M   G   D  TY 
Sbjct: 568 RIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYN 627

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +++GLCK + +DEA + ++++  KG+    +T   +     K G    AM +  ++   
Sbjct: 628 IILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687

Query: 607 LWIRTVNT 614
             ++ V T
Sbjct: 688 GLVQNVVT 695



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 233/542 (42%), Gaps = 46/542 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCAR 217
           ++  F  +G L+ GF+    +   G  +    +N+++   C+   V  A +V    M   
Sbjct: 100 LIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPEL 159

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR---GAILDNATLTLLITAFCDKGFR 274
           G   D  SY +++   C   R  EA   L  M D        +  + + +I  F  +G  
Sbjct: 160 GCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEG-- 217

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + + + L  EM+ +G  P+V T+T +IDGLCK    ++A  +F +++  +  KPN+ T
Sbjct: 218 -QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI-DNGVKPNIDT 275

Query: 335 YTAMISGY-----------------------------------CKEEKMNRAEMLLERMK 359
           Y  +I GY                                   CK  +   A    + M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+ P+  TY  +++G+   G     +DL++LM   G +PN + +N       K G + 
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           +A ++  K  Q+ L  D ++Y  L+    K      A   F +M+  G+ PDI  +++L+
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              C   K ++ E+ F E +  G+ P    + +++C   ++G +    +    +  +G  
Sbjct: 456 YGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVR 515

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAM 597
           PD I+Y  LI G C    +DEA +  E M+  G+ P   +  TL + YCK G  DSA + 
Sbjct: 516 PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH 575

Query: 598 I-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
              + S      + T NT++  L   KR   A   +  ++      D  +   + N   +
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635

Query: 657 SN 658
           SN
Sbjct: 636 SN 637



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 214/509 (42%), Gaps = 56/509 (11%)

Query: 149 FERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
           F+RA  V Q               C++  +  IG+ KE   M+ EM+  G      T   
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G    A   FD M  +G+    ++Y +M+  Y   G ++E    L+ M+  G
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG--- 310
              ++    +  +A+   G    I +A ++  +M ++G  P+  ++  LID LCK G   
Sbjct: 374 ISPNHHIFNIFFSAYAKCGI---IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD 430

Query: 311 ---------------------------------WTEKAFRLFLKLVRSDNYKPNVHTYTA 337
                                            W EK   LF +++      PN+  +  
Sbjct: 431 DAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW-EKVEELFFEMLNV-GIHPNIVFFNT 488

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++   CKE ++   + L++ ++  G+ P+  +Y +LI GHC  G  + A  L++ M   G
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ ++YN ++ G CK GR+  AY   +K     +    +TY  +L    +     +A 
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M+ +G   DI+ Y  ++   C+   + E+ K FQ   + GL     T+  MI   
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           L+ G    A+  F  +   G   + +TY  ++  L ++  L+E    + +M   G +P  
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK 606
                L      +GD + A   L  LD++
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDER 757



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 203/476 (42%), Gaps = 55/476 (11%)

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM-GR--VTEADRWLSAMLDR----- 252
           LGL + A ++FDE+      A   ++  ++ A  R  GR   T     + ++ +R     
Sbjct: 28  LGLGD-ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDC 86

Query: 253 --GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
                 +  T ++LI  FC  G    ++  F     +++ GW+ +      L++GLC   
Sbjct: 87  YIKVAPNRCTYSILIGCFCRMG---HLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGK 143

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL---PNT 367
              +A  + L+ +      P+  +Y  ++ G C E++   A  LL  M +  +    PN 
Sbjct: 144 RVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNV 203

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y+++I G    G  ++ Y+L   M   G  P++  Y  +IDGLCK      A  + ++
Sbjct: 204 VSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQ 263

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                ++ +  TY  L+  +L   + K+ + +   M   G  P+   Y +L+   C+  +
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS---------------------- 525
            +E+  FF   I  G+ P+  TY  M+ GY   G +S                       
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383

Query: 526 -------------AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
                        A+  F +M Q G +PD ++YGALI  LCK  ++D+A   +  MI +G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 573 ISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
           ++P  V   +L Y  C          +  E L+  +    V  NT++  LC E RV
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 212/505 (41%), Gaps = 37/505 (7%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ EG  +V  +   G+     + N ++   C  G ++ A ++ + M + G+  D+ SY
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLE 285
             ++  YC+ GR+  A      ML  G      T  T+L   F  K F     +A EL  
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRF----SEAKELYL 612

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M+  G K ++YT+ ++++GLCK    ++A ++F  L  S   + N+ T+  MI    K 
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC-SKGLQLNIITFNIMIGALLKG 671

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            +   A  L   +   GL+ N  TY  ++    + G+ E    L   M K G  PN    
Sbjct: 672 GRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 731

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS--------EHLKQAETK--- 454
           NA++  L  +G +  A   L K  +R    +  T ++L+S         H K    K   
Sbjct: 732 NALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRI 791

Query: 455 -----------------QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
                             A  LF  M+  GL PD+  Y T++    +  +  E+++ +  
Sbjct: 792 LNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 851

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            I +       TY  ++ G  +   +  A K FQ +   G   + IT+  +I  L K  +
Sbjct: 852 MINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGR 911

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNT 614
            ++A   + ++   G+ P  VT   +A    ++G   +     + +E     L  R +N 
Sbjct: 912 KEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNA 971

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKD 639
           L+R+L     +  A  +  KL  K+
Sbjct: 972 LVRRLLQRGDISRAGAYLSKLDEKN 996



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 179/411 (43%), Gaps = 32/411 (7%)

Query: 168  RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
            R  E   + + M N+G      T N ++   C+   V+ A ++F  +C++G+  +  ++ 
Sbjct: 603  RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662

Query: 228  LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +M+ A  + GR  +A    +A+   G + +  T  L++    ++G   S+++   L   M
Sbjct: 663  IMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG---SLEEFDSLFSAM 719

Query: 288  VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE- 346
             + G  PN      L+  L  +G   +A   +L  +   N+     T + +IS +  +E 
Sbjct: 720  EKNGTAPNSQMLNALVRRLLHRGDISRA-GAYLSKLDERNFSVEASTTSMLISIFSSDEY 778

Query: 347  ---------------------------KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
                                       +++ A  L   M  +GL P+  TY ++++G  +
Sbjct: 779  QHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 838

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             G F  A +L   M       NIY YN I++GLCK   V EA+++ +    + LQ + IT
Sbjct: 839  TGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 898

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
            + I++   LK    + A+ LF  +   GL PD+  Y  +      +  ++E +  F    
Sbjct: 899  FNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTME 958

Query: 500  TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
             +G         +++   L+ G+IS A  Y  ++++   + +  T   LIS
Sbjct: 959  KSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELIS 1009



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/371 (21%), Positives = 154/371 (41%), Gaps = 32/371 (8%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            M+ +  + GR ++   +   +  NGL     T   VV    E G +E  + +F  M   G
Sbjct: 664  MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-- 276
               ++     +V      G ++ A  +LS + +R   ++ +T ++LI+ F    ++    
Sbjct: 724  TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAK 783

Query: 277  -----------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
                                   I  A+ L  EM+ KG  P+V T+  ++ GL + G   
Sbjct: 784  SLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 843

Query: 314  KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            +A  L+L ++ S   + N++TY  +++G CK   ++ A  + + +  +GL  N  T+  +
Sbjct: 844  EAKELYLSMINSRT-QMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902

Query: 374  IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
            I    K G  E A DL   +   G  P++  Y  + + L ++G ++E   L     +   
Sbjct: 903  IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGT 962

Query: 434  QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR------QKK 487
              D      L+   L++ +  +A     ++ +   + +    + LI+ F R       K 
Sbjct: 963  PLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKS 1022

Query: 488  MKESEKFFQEA 498
            + E  +   EA
Sbjct: 1023 LPEKYRLLNEA 1033


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 244/537 (45%), Gaps = 51/537 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G   E   +  EM ++ +P+  +    ++   C  G V  A  +FDE+   G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-- 276
           V  + + + +++    ++G V +A+   + M   G        T+ I  F  KGFR    
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL-----QPTVFILNFLLKGFRKQNL 412

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           ++ A+ LL+  V  G   +V T+ +++  LC+ G   +A  L+ K++      P++ +Y 
Sbjct: 413 LENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMI-GKGITPSLVSYN 470

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            MI G+CK+  M+ A  ++  + E GL PN  TYT L+ G  K G+ E A+++ D M   
Sbjct: 471 HMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAA 530

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYE----LLKKAF----------------------- 429
           G  P  Y +N+II+GLCK GRV EA +     +K++F                       
Sbjct: 531 GIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSA 590

Query: 430 --------QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                   + E+  + ITYT L++   K  +   AL +   M + GL  DI  Y TLIA 
Sbjct: 591 ESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAG 650

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--NQIGCA 539
           FC+ + M+ + KFF + +  GL P    Y  MI  Y    N+ +A+   + M  N+I C 
Sbjct: 651 FCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPC- 709

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            D   Y +LI GL K+ KL  A   Y  M+ +GI P       L    C  G    A  I
Sbjct: 710 -DLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKI 768

Query: 600 LESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           L+ +D      TV   NTLI     E  +  A     ++L K    D  +   L N 
Sbjct: 769 LKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 233/521 (44%), Gaps = 45/521 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S+    ++ E       M  +G+      +N ++       +VE A  +FDEM
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R +  D  + ++++ A  + G+  EA+R+      RG  LD A+ +++I A C    R
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC----R 269

Query: 275 GS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           GS +  A +L+E     GW P+  T+  +I    + G   +A RL  ++V S     NV 
Sbjct: 270 GSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDS-RVPVNVA 328

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
             T++I GYC    +N A  L + + E G+ PN   ++ LI    K+GN E+A +L   M
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G  P ++  N ++ G  K+  ++ AY LL  A +  + A  +TY I+L    +  + 
Sbjct: 389 KCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKV 447

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  L+ +M+  G+ P + +Y  +I   C++  M ++ +     I +GL P   TYT +
Sbjct: 448 NEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC-------------------- 553
           + G  + G+   A   F +M   G  P + T+ ++I+GLC                    
Sbjct: 508 MEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSF 567

Query: 554 ---------------KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
                          K+  +D A   Y  M    ISP  +T  +L   +CK      A+ 
Sbjct: 568 IPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627

Query: 599 ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           + + + +K   L I    TLI   C  + +  A  FF KLL
Sbjct: 628 MHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 4/317 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G  E+A  +FD+M A G+     ++  ++   C++GRV+EA   L+  + +  I  + T 
Sbjct: 515 GDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTY 574

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             +I  +  +G   +I  A  +  EM R    PNV T+T LI+G CK    + A ++   
Sbjct: 575 NCIIDGYVKEG---AIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + R    + ++  Y  +I+G+CK + M  A     ++ E GL PNT  Y  +I  +  + 
Sbjct: 632 MKRK-GLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLN 690

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           N E A +L   M       ++  Y ++IDGL K+G++  A +L  +   R +  D   Y 
Sbjct: 691 NMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYN 750

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           +L++      + + A  +   M    + P +  Y TLIA   ++  ++E+ +   E +  
Sbjct: 751 VLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDK 810

Query: 502 GLFPTKETYTSMICGYL 518
           GL P   TY  ++ G L
Sbjct: 811 GLVPDDTTYDILVNGKL 827



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 38/326 (11%)

Query: 351 AEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            E+L+E  +  G  L ++  +  L+  + +      A +    M ++G  P +   N ++
Sbjct: 135 VELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLL 194

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             + ++  V++A+ L  +  +R +  D  T  +L+   LK  +  +A   F +    GL 
Sbjct: 195 TAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLK 254

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY------------------- 510
            D  +Y+ +I A CR   +  + K  +     G  P++ TY                   
Sbjct: 255 LDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRL 314

Query: 511 ----------------TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
                           TS+I GY   G+++SA++ F  + ++G  P+   +  LI    K
Sbjct: 315 KDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSK 374

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--LWIRTV 612
              +++A + Y  M   G+ P       L   + KQ     A ++L+   +     + T 
Sbjct: 375 IGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTY 434

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGK 638
           N ++  LC   +V  A   + K++GK
Sbjct: 435 NIVLLWLCELGKVNEACNLWDKMIGK 460


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/656 (23%), Positives = 273/656 (41%), Gaps = 95/656 (14%)

Query: 5   HVLRSHGLRGKPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKT 64
           HV   H  R   S   S ++ V+  +    HH+NF       +F ++ S P+   + ++ 
Sbjct: 11  HVFSIHNFRCSYS---SFSVTVVHQIAKAFHHNNF-------SFFNSGSLPNLQPAHLEP 60

Query: 65  VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
           V           F LRS+P                                AL FF WA 
Sbjct: 61  VV----------FQLRSNPTS------------------------------ALRFFEWAE 80

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
            F    H ++ +   A  L+ +  F+ A  V   MV  F  +  L E         +N  
Sbjct: 81  NFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNP- 139

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV------------------------- 219
              ++  + ++   C  G+V+ A + F  M   GV                         
Sbjct: 140 ---STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILE 196

Query: 220 -----CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                C     Y+ +  ++ + G V +   +  A+++RG +        ++   C     
Sbjct: 197 NYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLC---MG 253

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A +  + MVR G  PN+ T + LI+  CK+   ++AF L+  L+      P++  
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY-NLMIEKGIVPDLVI 312

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I+G  +  K+     L      +G+  +   ++S++  + +VG+  +A ++   M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           KEG +PN+  Y+ +I+GLC+ GRV EA  +  +  ++ L+   +TY+ L+    K    +
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
              GL+  M++ G  PD+   + LI    RQ  M E+ +FF +A+  GL      + ++I
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R       +K +  M      PD +TY  L+ GL +Q +LDEA   +  ++ KG S
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEK 623
           P  +   TL   +CK+ D AT + I + +       D  ++   +N   R+ C E 
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 243/527 (46%), Gaps = 41/527 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V + + +SF + G +++G +    +   GL       N+++   C    +  A + FD M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI--------- 265
              G   +  ++  ++  YC+  R+ EA    + M+++G + D    ++LI         
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 266 ----------------------TAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                                 ++  D   R G + +A E+   M+++G  PNV T+++L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I+GLC+ G   +A  +F ++++    +P+V TY+++I G+CK E +     L   M  +G
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQ-GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            +P+    + LI G  + G  + A        K G T N Y +NA+IDG  +  R ++  
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ++       ++  D +TYT+L+    +Q    +AL LF +++K G +PD   Y TLI  F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+++      + F+   + G+FP    Y  +I  + R+G + + ++  + + + G  PD 
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY  +I G C      +A + +E +      P  +T   L   YCK G    AM+I  S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 603 LDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           + ++     I T + LI      +    A   + K+LG     DRVS
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLG-----DRVS 727



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 228/484 (47%), Gaps = 39/484 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++     G+L+EG S+       G+ +     + ++     +G +  A EV+  M
Sbjct: 312 IYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +Y +++   CR GRV EA      +L +G      T + LI  FC     
Sbjct: 372 LKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS--- 428

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----DNYK- 329
            +++  F L   M+RKG  P+V   ++LI+GL ++G  ++A R F + V+     +NY  
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488

Query: 330 -----------------------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                                        P+V TYT ++ G  ++ +++ A  L  ++ +
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G  P+   Y +LI G CK  +      +  LM   G  P+I  YN +I+   ++G V+ 
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLI 479
             ELL++  +  L+ D +TY  ++  +       +A+ LF  ++K G   P+   +T LI
Sbjct: 609 VLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILI 667

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            A+C+  +M ++   F   +  G  P   TY+ +I GY +  N  SA + +++M     +
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVS 727

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+ ++Y  LI GLCK+  ++EA   ++  IG+ + P  +    L   YCK G  A AM++
Sbjct: 728 PNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMML 787

Query: 600 LESL 603
            + +
Sbjct: 788 YDHM 791



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 192/391 (49%), Gaps = 6/391 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F +   L++GF +   M   G +P +      + G++ + G+++ A   F +   R
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQ-GMMDEALRFFFQAVKR 479

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +   +  ++    R+ R  +  +    M     I D  T T+L+    ++G    +
Sbjct: 480 GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG---RL 536

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L  ++++KG+ P+   +  LIDG CKK       ++F KL++S+   P++  Y  
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF-KLMQSNGIFPDICIYNV 595

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+ + +E  +     LL  + + GL P+  TY ++I G+C +  F +A  L +++    
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   +  +ID  CK GR+ +A  +     +R  + + +TY+ L+  + K   T+ A 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+ +M+   ++P+I +Y+ LI   C++  M+E+   FQ AI   L P    Y  +I GY
Sbjct: 716 ELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            + G ++ A+  +  M   G  PD++   AL
Sbjct: 776 CKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F   H +   ++  F +      G  +   M +NG+       N ++ +    G VE   
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITA 267
           E+  E+   G+  D  +Y  M+  YC +   ++A + L  +L  G    NA T T+LI A
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK-LFEVLKCGRTQPNAITFTILIDA 669

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +C  G    +  A  +   M+ +G +PN+ T++ LIDG  K   TE AF L+ K++  D 
Sbjct: 670 YCKDG---RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML-GDR 725

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             PN+ +Y+ +I G CK+  M  A +  +    + LLP+   Y  LI G+CKVG    A 
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 388 DLMDLMGKEGCTPN 401
            L D M   G  P+
Sbjct: 786 MLYDHMLVNGIMPD 799



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 18/321 (5%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           L+R   + P    +  M+  +   E +          +  G  P+T  Y+ L++ +C+ G
Sbjct: 99  LLRHRMFDPATRVFDRMVGQFGNLEVLGEFH---GSFRNYGSNPST-VYSFLLHCYCRNG 154

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ---EAYELLKKAFQRELQADKI 438
             +RA D    M K G + + YA + ++D L    R+    E YE + K           
Sbjct: 155 MVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLG-------- 206

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y  + +  LK+ E ++ L     +V+ GL P I     ++   C   ++  +  FF   
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + +G  P   T++++I  Y ++  +  A   +  M + G  PD + Y  LI+GL +  KL
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           +E    +   + +G+    V   ++   Y + GD   A+ +   + K+     + T + L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 616 IRKLCSEKRVGMAALFFHKLL 636
           I  LC   RV  A   F ++L
Sbjct: 387 INGLCRNGRVLEACGVFGQIL 407



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
            +P    +  ++  F   + + E    F+     G  P+   Y+ ++  Y R+G +  AV
Sbjct: 105 FDPATRVFDRMVGQFGNLEVLGEFHGSFR---NYGSNPST-VYSFLLHCYCRNGMVDRAV 160

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  M+++G +  +     ++  L    ++D   + YE M  KG+   E    +    +
Sbjct: 161 DTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-KGLGVYEFVFNS----F 215

Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
            K+G+    +    +L ++  +  +   N +++ LC   ++G+A+ FF  ++    + + 
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 645 VSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           V+ + L N  C E      FS  +  I +GI
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 203/394 (51%), Gaps = 7/394 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        +++ F + G +K+  ++  EM ++G+ ++ S  N V+   C  G +  A 
Sbjct: 133 FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSH-NIVLRGLCSGGKISMAW 191

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           EVF +M       +  SY +M+   C+  +V +A      M+D+    D  T   LI   
Sbjct: 192 EVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGL 250

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G +  +K+A++L EE   KG  P V T+  +IDGLCK G  E A  L+  +VR  + 
Sbjct: 251 ---GKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHL 307

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KP++ TY+A+I+G     +  +A  L E M + G  P+  TY +L+ G CK G  ++A +
Sbjct: 308 KPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAME 367

Query: 389 LMDLMGKEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +   MG    C PN+  Y  +ID  CK  R+ +A +L K+   R L  D +T+T ++ + 
Sbjct: 368 IFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKL 427

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K++   +A  LF  + K    PD   + T++A +C+  ++ +++K     + +G  PT 
Sbjct: 428 CKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTL 486

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            TYT+++ G+ R G  S A+  +  M ++G  P+
Sbjct: 487 ATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 209/417 (50%), Gaps = 11/417 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ +  +   VE A   F          D  SY  ++  + + G V +A      M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 250 LDRG-AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            D G A+L +  + L     C  G    I  A+E+ ++M    + PN+ ++T++IDGLCK
Sbjct: 164 KDSGIAVLRSHNIVL--RGLCSGG---KISMAWEVFKDM-SGIFSPNLISYTIMIDGLCK 217

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
               +KA  LF ++V    Y P+V TY A+I G  K+ ++  A  L E  + +G  P   
Sbjct: 218 SRKVDKAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 276

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           TY ++I G CK G  E A  L D M +E    P+++ Y+A+I+GL    R ++AYEL ++
Sbjct: 277 TYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEE 336

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRM-VKAGLNPDIHAYTTLIAAFCRQK 486
                   D +TY  LL    K     +A+ +F +M V    +P++  YT LI  FC+  
Sbjct: 337 MLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVD 396

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ ++ K  +E     L P   T+T++I    ++  I  A + F+ + +  C PD++ + 
Sbjct: 397 RLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFN 455

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            +++G CK +++D+A + ++ M+  G +P   T   L   +C+ G  + A+I+   +
Sbjct: 456 TMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 181/366 (49%), Gaps = 11/366 (3%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           ++ A    +  ++  ++P+  ++  L++G  K G  +KA  LF ++   D+    + ++ 
Sbjct: 118 VEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM--KDSGIAVLRSHN 175

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLL-PNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            ++ G C   K++ A  + + M   G+  PN  +YT +I G CK    ++A  L   M  
Sbjct: 176 IVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD 233

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +   P++  Y A+IDGL K+ RV+EAY+L ++A  +      +TY  ++    K    + 
Sbjct: 234 KAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIEN 293

Query: 456 ALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           AL L+  MV+   L PD+  Y+ LI       + +++ + ++E +  G  P   TY +++
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353

Query: 515 CGYLRDGNISSAVKYFQRMNQIG--CAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            G  + G    A++ F++M  +G  C P+ ITY  LI   CK  +L +A +  + M G+ 
Sbjct: 354 DGLCKSGCEDKAMEIFRKMG-VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRS 412

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAAL 630
           + P  VT  T+  + CK+     A  + ES+ K     +V  NT++   C   R+  A  
Sbjct: 413 LLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKK 472

Query: 631 FFHKLL 636
              ++L
Sbjct: 473 LHDRML 478



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 172/369 (46%), Gaps = 17/369 (4%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A+ +F    +   +  N  T   ++S Y K  ++  A +  +   +    P+  +Y +L+
Sbjct: 85  AWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLM 144

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G  K G+ ++A  L   M   G    + ++N ++ GLC  G++  A+E+ K        
Sbjct: 145 NGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKD-MSGIFS 202

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            + I+YTI++    K  +  +A+ LF +MV   + PD+  Y  LI    +Q+++KE+   
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLC 553
           F+EA   G  PT  TY +MI G  + G I +A+  +  M  +    PD  TY ALI+GL 
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL------DKKL 607
             ++ ++A + YE M+  G SP  VT  TL    CK G    AM I   +      D  +
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL-AALKNACYESNKYALFSDL 666
              TV  LI + C   R+G A     ++ G+    D V+    ++  C ES       D 
Sbjct: 383 ITYTV--LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR-----IDE 435

Query: 667 SQRIAEGIG 675
           +  + E IG
Sbjct: 436 AHELFESIG 444



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 140/271 (51%), Gaps = 5/271 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLT 262
           V+ A ++F+E  A+G      +Y  M+   C+ GR+  A      M+    +  D  T +
Sbjct: 256 VKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYS 315

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI    +   RG  ++A+EL EEM+  G  P+V T+  L+DGLCK G  +KA  +F K+
Sbjct: 316 ALINGL-NLSNRG--EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
              +   PNV TYT +I  +CK +++  A  L + M+ + LLP+  T+T++I   CK   
Sbjct: 373 GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR 432

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A++L + +GK  C P+   +N ++ G CK  R+ +A +L  +           TYT 
Sbjct: 433 IDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTA 491

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           L++   +      AL ++  M++ G  P+ H
Sbjct: 492 LVTGFCRTGRYSDALIMYHEMIEMGFPPERH 522


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 213/477 (44%), Gaps = 33/477 (6%)

Query: 207 AEEVFDEMC---ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD----RGAILDNA 259
           A  +FD +    A G+ A +++++ +V+A+   GR  EA    S M D      A + NA
Sbjct: 125 AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNA 184

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              +L+        RG I  A  L   MV  G  PN  T+ VL+DGLCK+G    A ++F
Sbjct: 185 VFQVLVD-------RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMF 237

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            +++      P+V  YT ++S  C E ++  A  LL  MKE G  P+  TYT  + G CK
Sbjct: 238 DEMLER-GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  + A+   +L+   G T  +  Y+ +IDGL + GR  E      +   + +  D   
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           YTIL+    +   TK A  L   M   G  PD   Y TL+ A      +  ++    E +
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
              +     T+  MICG  + G I  A++ F  M + GC P  +TY ALI GL +   L+
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYE--------------YCKQGDSATAMIILESLDK 605
           EA   +  M   G +P    R+TL                  C+ G    A  +L  + +
Sbjct: 477 EARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIE 535

Query: 606 KLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
              +  V   NTLI  LC  K +  A   F +L  K  + D ++   L +  + +++
Sbjct: 536 SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHR 592



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 237/520 (45%), Gaps = 25/520 (4%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           + +V + +  GR +E       M +          N V  +  + G++  A  +++ M +
Sbjct: 148 RALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVS 207

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   ++++Y +++   C+ G   +A +    ML+RG + D    T+L+++ C++   G 
Sbjct: 208 SGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNE---GR 264

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           I+ A  LL  M   G  P+  T+TV + GLCK G  ++AF  F +L++   +   +  Y+
Sbjct: 265 IEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF-ELLQDGGFTLGLIGYS 323

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I G  +  + +        M  + + P+   YT LI    + G  + A+ L+D M  +
Sbjct: 324 CLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK 383

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ + YN ++  L   G +  A  L+ +  Q  +  D  T+ I++    K+    +A
Sbjct: 384 GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKA 443

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-------------AITAGL 503
           + +F  M + G +P +  Y  LI    R   ++E+   F +              + A  
Sbjct: 444 MQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQ 503

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
               E+   ++ G  + G +  A K  + + + G  PD +TY  LI+GLCK   LD A +
Sbjct: 504 VRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALR 563

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
            ++ +  KGISP E+T  TL     +      A ++ +++ +     ++   NT++R LC
Sbjct: 564 LFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLC 623

Query: 621 SEKRVGMAALFFHKLLGKDQNV---DRVSLAALKNACYES 657
             K++  A   +   L K  N+   D V   A K  C+E 
Sbjct: 624 RMKKLSQAINLWLDYLPKKYNLSPEDEVIANARK--CFED 661



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 244/552 (44%), Gaps = 54/552 (9%)

Query: 133 MRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVI 177
           +++Y V  +SL + G  E A  ++  M               +S   + GR+ E F    
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308

Query: 178 EMTNNGLPLITSTLNRVVGIAC------ELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            + + G  L       ++G +C      + G  +     + EM  + +  D + Y +++ 
Sbjct: 309 LLQDGGFTL------GLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIR 362

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
            +   GR  +A   L  M D+G + D      L+ A  D G   +I +A  L+ EM++  
Sbjct: 363 RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVG---NIDRAQSLMSEMLQNN 419

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
              +  TH ++I GLCKKG  +KA ++F ++     + P V TY A+I G  +   +  A
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCH-PTVMTYNALIDGLYRAGMLEEA 478

Query: 352 EMLLERMKEQGLLP--------------NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            ML  +M E G  P              +T +   L+ G C+ G   +AY L+  + + G
Sbjct: 479 RMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESG 537

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  YN +I+GLCK   +  A  L K+   + +  D+ITY  L+    +      A 
Sbjct: 538 VVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDAT 597

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA--GLFPTKETYTSMIC 515
            LF  ++++G  P +  Y T++ + CR KK+ ++   + + +     L P  E   +   
Sbjct: 598 MLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARK 657

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +  DG +   VK   +++Q+  + +   Y   + GLC+  K+D+A + +  +   GI  
Sbjct: 658 CF-EDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVV 716

Query: 576 CEVTRVTLAYEYC-KQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSE-KRVGMAALF 631
                  L    C  +  +A   I++ +L K+  +     N L+R LC   +R    AL 
Sbjct: 717 TPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALS 776

Query: 632 FH-KLLGKDQNV 642
           +   L+G D +V
Sbjct: 777 WRMHLVGYDMDV 788



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/399 (20%), Positives = 147/399 (36%), Gaps = 88/399 (22%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +  ++G +    S++ EM  N + L ++T N ++   C+ GL++ A +VFDEM   G
Sbjct: 395 LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHG 454

Query: 219 V------------------------------------------------CADASSYKLMV 230
                                                              D  S + +V
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLV 514

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C+ G+V +A + L  +++ G + D  T   LI   C      ++  A  L +E+  K
Sbjct: 515 DGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK---NLDGALRLFKELQLK 571

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  P+  T+  LIDGL +      A  LF  ++RS  + P++  Y  M+   C+ +K+++
Sbjct: 572 GISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF-PSLPIYNTMMRSLCRMKKLSQ 630

Query: 351 A------------------EMLLERMK--EQGLLP----------------NTNTYTSLI 374
           A                  E++    K  E G L                 N N YT  +
Sbjct: 631 AINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWV 690

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G C+V   + A  +  ++ + G          +I+ LC    +  A +++     +   
Sbjct: 691 IGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFI 750

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
             +     LL     +     A  L  RM   G + D++
Sbjct: 751 VSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGYDMDVY 789


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/608 (25%), Positives = 262/608 (43%), Gaps = 59/608 (9%)

Query: 95  LTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRH----------FMRLY-----IVC 139
           ++ ++ + V+ S+ +    + ALS+FY    F    H          F+R++     +  
Sbjct: 87  VSEDEVLGVLKSMTD---PIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAA 143

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
               +      R  +    +  + +  G L++  +++ +M   G  L   + N ++ +  
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           + G    A EV+  M + G+     +Y  ++VA  +          L  M D G   +  
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T T+ I      G  G I +A+E+   M  +G  P++ T+TVLID LC  G  E A  LF
Sbjct: 264 TFTICIRVL---GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 320 LKL----------------------------------VRSDNYKPNVHTYTAMISGYCKE 345
           +K+                                  + +D Y P+V T+T ++   CK 
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
              + A    + M++QG+LPN +TY +LI G  + G  E A  L+D M   G  P  Y Y
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
              ID   K G   +A E  +K   + +  + +     L    +    ++A  +F  + +
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL PD   Y  ++  + +  ++ E+     E I  G  P      S+I    + G +  
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A + F RM  +  +P  +TY  L+SGL K+ ++ +A + +ESMI K  SP  ++  TL  
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620

Query: 586 EYCKQGDSATAMIILES---LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +CK  +   A+ +      +D K  + T NT+I  L  E +V  A  FFH+ L K  + 
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHP 679

Query: 643 DRVSLAAL 650
           D V++  L
Sbjct: 680 DHVTICTL 687



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 218/511 (42%), Gaps = 70/511 (13%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E + +   M + G      T   ++   C  G +E A+E+F +M A G   D   Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-----DKGFR------- 274
             ++  +   G +     + S M   G + D  T T+L+   C     D+ F        
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRK 395

Query: 275 --------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                               G I+ A +LL+ M   G +P  YT+   ID   K G T K
Sbjct: 396 QGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGK 455

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   F K+ ++    PN+    A +    +  ++  A+ +   ++E GL P++ TY  ++
Sbjct: 456 AVETFEKM-KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMM 514

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + KVG  + A +L+  M + GC P++   N++ID L K GRV EA+++  +    +L 
Sbjct: 515 KCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS 574

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
              +TY  LLS   K+   ++A+ LF  M+    +P+  ++ TL+  FC+  +++ + K 
Sbjct: 575 PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKM 634

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F +       P   TY ++I G +++  ++ A  +F ++ +    PD++T   L+ GL K
Sbjct: 635 FSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVK 693

Query: 555 ------------------------------------QSKLDEACQFYESMIGKGISPCEV 578
                                               ++++D+A  F E ++  GI   + 
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
             + L    CK      A  I +   KKL I
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 175/372 (47%), Gaps = 5/372 (1%)

Query: 178  EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRM 236
            E+  NG+    S L  +V + C+     YA ++FD+   + G+    +SY  ++     +
Sbjct: 742  ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801

Query: 237  GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
                +A      M + G   D  T  +L+      G  G I + FEL +EM+ +  KP+ 
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV---HGKSGKITELFELYKEMISRRCKPDA 858

Query: 297  YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
             T+ ++I  L K    +KA   F  LV SD ++P   TY  +I G  K  ++  A  L E
Sbjct: 859  ITYNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFE 917

Query: 357  RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
             M + G  PN   +  LI G+ K+G+ E A  L   M  EG  P++ +Y  ++D LC  G
Sbjct: 918  EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAG 977

Query: 417  RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            RV EA     +     L  D I Y  +++   K    ++AL L+  M   G+ PD++ Y 
Sbjct: 978  RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037

Query: 477  TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +L+        ++++++ ++E   AGL P   TY ++I GY    N   A   ++ M   
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 537  GCAPDNITYGAL 548
            GC P+  TY  L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 229/555 (41%), Gaps = 55/555 (9%)

Query: 162  SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
            S AE+GRL+E  +M   +  NGL   + T N ++    ++G V+ A  +  EM   G   
Sbjct: 481  SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 222  DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
            D      ++ +  + GRV EA +    M D        T   L++     G  G +++A 
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL---GKEGRVQKAI 597

Query: 282  ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            EL E M+ K   PN  +   L+D  CK    E A ++F K+   D  KP+V TY  +I G
Sbjct: 598  ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD-CKPDVLTYNTVIYG 656

Query: 342  YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTP 400
              KE K+N A     ++K + + P+  T  +L+ G  K G    A  +  D M +     
Sbjct: 657  LIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRV 715

Query: 401  NIYAYNAIIDGLCKKGRVQEAY----ELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            N   +  ++ G   +  + +A     EL+     RE  +  I    +L +H ++    Q 
Sbjct: 716  NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRE-DSFLIPLVRVLCKHKRELYAYQI 774

Query: 457  LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
               F +  K G++P + +Y  LI         +++   F++    G  P   T+  ++  
Sbjct: 775  FDKFTK--KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV 832

Query: 517  YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            + + G I+   + ++ M    C PD ITY  +IS L K + LD+A  F+  ++     P 
Sbjct: 833  HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 577  EVTRVTLAYEYCKQGDSATAMIILESLDK---------------------------KLWI 609
              T   L     K G    AM + E +                             +L+ 
Sbjct: 893  PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 610  RTVNTLIRK-----------LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            R VN  IR            LC   RV  A  +F++L     + D ++   + N   +S 
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012

Query: 659  K----YALFSDLSQR 669
            +     AL++++  R
Sbjct: 1013 RMEEALALYNEMRNR 1027



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 162/365 (44%), Gaps = 5/365 (1%)

Query: 212  DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCD 270
            +E+   G+C + S    +V   C+  R   A +       +  I    A+   LI    +
Sbjct: 741  EELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800

Query: 271  KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
              +    ++A++L ++M   G  P+ +T  +L+    K G   + F L+ +++ S   KP
Sbjct: 801  VHY---TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKP 856

Query: 331  NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
            +  TY  +IS   K   +++A      +      P   TY  LI G  KVG  E A  L 
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 391  DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
            + M   GC PN   +N +I+G  K G  + A +L K+     ++ D  +YTIL+      
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 451  AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                +AL  F  +   GL+PD  AY  +I    + ++M+E+   + E    G+ P   TY
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 511  TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             S++      G +  A + ++ +   G  PD  TY ALI G       + A   Y++M+ 
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096

Query: 571  KGISP 575
             G +P
Sbjct: 1097 DGCNP 1101



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 28/281 (9%)

Query: 93   DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            D++T+     V++SLA       AL FFY  +  + FR   R Y                
Sbjct: 857  DAITYN---IVISSLAKSNNLDKALDFFYDLVS-SDFRPTPRTY---------------- 896

Query: 153  HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
                  ++   A++GRL+E   +  EM++ G     +  N ++    ++G  E A ++F 
Sbjct: 897  ----GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952

Query: 213  EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
             M   G+  D  SY ++V   C  GRV EA  + + +   G   D      +I      G
Sbjct: 953  RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL---G 1009

Query: 273  FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                +++A  L  EM  +G  P++YT+  L+  L   G  E+A R++ +L  +   +P+V
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA-GLEPDV 1068

Query: 333  HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
             TY A+I GY   E    A  + + M   G  PN  TY  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/656 (23%), Positives = 273/656 (41%), Gaps = 95/656 (14%)

Query: 5   HVLRSHGLRGKPSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKT 64
           HV   H  R   S   S ++ V+  +    HH+NF       +F ++ S P+   + ++ 
Sbjct: 11  HVFSIHNFRCSYS---SFSVTVVHQIAKAFHHNNF-------SFFNSGSLPNLQPAHLEP 60

Query: 65  VCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
           V           F LRS+P                                AL FF WA 
Sbjct: 61  VV----------FQLRSNPTS------------------------------ALRFFEWAE 80

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
            F    H ++ +   A  L+ +  F+ A  V   MV  F  +  L E         +N  
Sbjct: 81  NFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNP- 139

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV------------------------- 219
              ++  + ++   C  G+V+ A + F  M   GV                         
Sbjct: 140 ---STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILE 196

Query: 220 -----CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                C     Y+ +  ++ + G V +   +  A+++RG +        ++   C     
Sbjct: 197 NYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLC---MG 253

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             I  A +  + MVR G  PN+ T + LI+  CK+   ++AF L+  L+      P++  
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY-NLMIEKGIVPDLVI 312

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+ +I+G  +  K+     L      +G+  +   ++S++  + +VG+  +A ++   M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           KEG +PN+  Y+ +I+GLC+ GRV EA  +  +  ++ L+   +TY+ L+    K    +
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
              GL+  M++ G  PD+   + LI    RQ  M E+ +FF +A+  GL      + ++I
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R       +K +  M      PD +TY  L+ GL +Q +LDEA   +  ++ KG S
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEK 623
           P  +   TL   +CK+ D AT + I + +       D  ++   +N   R+ C E 
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 242/527 (45%), Gaps = 41/527 (7%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V + + +SF + G +++G +    +   GL       N+++   C    +  A + FD M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI--------- 265
              G   +  ++  ++  YC+  R+ EA    + M+++G + D    ++LI         
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 266 ----------------------TAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVL 302
                                 ++  D   R G + +A E+   M+++G  PNV T+++L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I+GLC+ G   +A  +F ++++    +P+V TY+++I G+CK E +     L   M  +G
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQ-GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
            +P+    + LI G  + G  + A        K G T N Y +NA+IDG  +  R ++  
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           ++       ++  D +TYT+L+    +Q    +AL LF +++K G +PD   Y TLI  F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C+++      + F+   + G+FP    Y  +I  + R+G + + ++  + + + G  PD 
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY  +I G C      +A + +E +      P  +T   L   YCK G    AM+I  S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 603 L---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           +     +  I T + LI      +    A   + K+LG     DRVS
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLG-----DRVS 727



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 228/484 (47%), Gaps = 39/484 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   +++     G+L+EG S+       G+ +     + ++     +G +  A EV+  M
Sbjct: 312 IYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  +  +Y +++   CR GRV EA      +L +G      T + LI  FC     
Sbjct: 372 LKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS--- 428

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----DNYK- 329
            +++  F L   M+RKG  P+V   ++LI+GL ++G  ++A R F + V+     +NY  
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488

Query: 330 -----------------------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                                        P+V TYT ++ G  ++ +++ A  L  ++ +
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G  P+   Y +LI G CK  +      +  LM   G  P+I  YN +I+   ++G V+ 
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG-LNPDIHAYTTLI 479
             ELL++  +  L+ D +TY  ++  +       +A+ LF  ++K G   P+   +T LI
Sbjct: 609 VLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILI 667

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            A+C+  +M ++   F   +  G  P   TY+ +I GY +  N  SA + +++M     +
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVS 727

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           P+ ++Y  LI GLCK+  ++EA   ++  IG+ + P  +    L   YCK G  A AM++
Sbjct: 728 PNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMML 787

Query: 600 LESL 603
            + +
Sbjct: 788 YDHM 791



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 192/391 (49%), Gaps = 6/391 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++  F +   L++GF +   M   G +P +      + G++ + G+++ A   F +   R
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQ-GMMDEALRFFFQAVKR 479

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  +   +  ++    R+ R  +  +    M     I D  T T+L+    ++G    +
Sbjct: 480 GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG---RL 536

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L  ++++KG+ P+   +  LIDG CKK       ++F KL++S+   P++  Y  
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF-KLMQSNGIFPDICIYNV 595

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+ + +E  +     LL  + + GL P+  TY ++I G+C +  F +A  L +++    
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   +  +ID  CK GR+ +A  +     +R  + + +TY+ L+  + K   T+ A 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+ +M+   ++P+I +Y+ LI   C++  M+E+   FQ AI   L P    Y  +I GY
Sbjct: 716 ELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            + G ++ A+  +  M   G  PD++   AL
Sbjct: 776 CKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F   H +   ++  F +      G  +   M +NG+       N ++ +    G VE   
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITA 267
           E+  E+   G+  D  +Y  M+  YC +   ++A + L  +L  G    NA T T+LI A
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK-LFEVLKCGRTQPNAITFTILIDA 669

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           +C  G    +  A  +   M+ +G +PN+ T++ LIDG  K   TE AF L+ K++  D 
Sbjct: 670 YCKDG---RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML-GDR 725

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             PN+ +Y+ +I G CK+  M  A +  +    + LLP+   Y  LI G+CKVG    A 
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 388 DLMDLMGKEGCTPN 401
            L D M   G  P+
Sbjct: 786 MLYDHMLVNGIMPD 799



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 18/321 (5%)

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           L+R   + P    +  M+  +   E +          +  G  P+T  Y+ L++ +C+ G
Sbjct: 99  LLRHRMFDPATRVFDRMVGQFGNLEVLGEFH---GSFRNYGSNPST-VYSFLLHCYCRNG 154

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ---EAYELLKKAFQRELQADKI 438
             +RA D    M K G + + YA + ++D L    R+    E YE + K           
Sbjct: 155 MVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLG-------- 206

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y  + +  LK+ E ++ L     +V+ GL P I     ++   C   ++  +  FF   
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           + +G  P   T++++I  Y ++  +  A   +  M + G  PD + Y  LI+GL +  KL
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTL 615
           +E    +   + +G+    V   ++   Y + GD   A+ +   + K+     + T + L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 616 IRKLCSEKRVGMAALFFHKLL 636
           I  LC   RV  A   F ++L
Sbjct: 387 INGLCRNGRVLEACGVFGQIL 407



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
            +P    +  ++  F   + + E    F+     G  P+   Y+ ++  Y R+G +  AV
Sbjct: 105 FDPATRVFDRMVGQFGNLEVLGEFHGSFR---NYGSNPST-VYSFLLHCYCRNGMVDRAV 160

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F  M+++G +  +     ++  L    ++D   + YE M  KG+   E    +    +
Sbjct: 161 DTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-KGLGVYEFVFNS----F 215

Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
            K+G+    +    +L ++  +  +   N +++ LC   ++G+A+ FF  ++    + + 
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 645 VSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           V+ + L N  C E      FS  +  I +GI
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 39/428 (9%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P+I    N+++G   +L        +  +M  +G+  +  +  +++  +C +G++  +  
Sbjct: 9   PIIE--FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            L  +L  G   +  T T L+   C    +G +K+     +++V + ++ N  ++  L++
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLC---LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLCK G T  A +L L+++   + +PNV  Y+A+I G CK++ +N A  L   M  + + 
Sbjct: 124 GLCKTGETRCAIKL-LRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLM-------------------DLMGKEG-------- 397
           PN  TY +LI   C  G    A+ L+                   D + KEG        
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFH 242

Query: 398 ------CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
                   PN+Y+YN +I+GLCK  RV EA  LL++   + +  D +TY  L+    K  
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               AL L   M   G   D+  YT+L+ A C+ + + ++   F +    G+ PT  TYT
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 362

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G  + G + +A + FQ +   GC  D  TY  +ISGLCK+   DEA      M   
Sbjct: 363 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 422

Query: 572 GISPCEVT 579
           G  P  VT
Sbjct: 423 GCIPNAVT 430



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 214/462 (46%), Gaps = 20/462 (4%)

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKE 171
           GS+V L ++   I  +K               +     E+    +  +++ F  +G++  
Sbjct: 18  GSLVKLKYYLTVISLSK--------------QMDVKGIEQNLVTLSILINCFCHLGQMAF 63

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            FS++ ++   G    T T   ++   C  G V+      D++ A+    +  SY  ++ 
Sbjct: 64  SFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C+ G    A + L  + DR    +    + +I   C       + +A++L  EM  + 
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKL---VNEAYDLYSEMDARE 180

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV T+  LI   C  G    AF L  +++   N  P+V+T++ +I   CKE K   A
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK-NINPDVYTFSILIDALCKEGK--NA 237

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + +   M + G+ PN  +Y  +I G CK    + A +L+  M  +   P+   YN++IDG
Sbjct: 238 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LCK GR+  A  L+ +   R   AD +TYT LL    K     +A  LF +M + G+ P 
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ YT LI   C+  ++K +++ FQ  +  G      TYT MI G  ++G    A+    
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +M   GC P+ +T+  +I  L ++ + D+A +    MI KG+
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 14/383 (3%)

Query: 246 LSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           LS  +D   I  N  TL++LI  FC     G +  +F LL ++++ G+ PN  T T L+ 
Sbjct: 32  LSKQMDVKGIEQNLVTLSILINCFCH---LGQMAFSFSLLGKILKLGYXPNTITWTTLMK 88

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC KG  +K      K+V +  ++ N  +Y  +++G CK  +   A  LL  ++++   
Sbjct: 89  GLCLKGEVKKLLHFHDKVV-AQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTR 147

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN   Y+++I G CK      AYDL   M      PN+  YN +I   C  G++  A+ L
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +   + +  D  T++IL+    K  E K A  +F  MV+ G+NP++++Y  +I   C+
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCK--EGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 265

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K++ E+    +E +   + P   TY S+I G  + G I+SA+     M+  G   D +T
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y +L+  LCK   LD+A   +  M  +GI P   T   L    CK G    A  + + L 
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385

Query: 605 KK-----LWIRTVNTLIRKLCSE 622
            K     +W  TV  +I  LC E
Sbjct: 386 VKGCCIDVWTYTV--MISGLCKE 406



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 9/323 (2%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L ++M  +G+  N  T + LI   C +G    ++ L+  + K G  PN   +  ++ GLC
Sbjct: 32  LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
            KG V++      K   +  Q ++++Y  LL+   K  ET+ A+ L   +      P++ 
Sbjct: 92  LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVV 151

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+ +I   C+ K + E+   + E     +FP   TY ++IC +   G +  A      M
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 PD  T+  LI  LCK+ K   A Q + +M+  G++P   +   +    CK    
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 594 ATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             AM +L E L K +   TV  N+LI  LC   R+  A    +++  + Q  D V+  +L
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329

Query: 651 KNA-CYESN---KYALFSDLSQR 669
            +A C   N     ALF  + +R
Sbjct: 330 LDALCKNQNLDKATALFMKMKER 352



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   +  R+ E  +++ EM +  +   T T N ++   C+ G +  A  + +EM  RG
Sbjct: 259 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             AD  +Y  ++ A C+   + +A      M +RG      T T LI   C KG  G +K
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC-KG--GRLK 375

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A EL + ++ KG   +V+T+TV+I GLCK+G  ++A  +  K+   +   PN  T+  +
Sbjct: 376 NAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM-EDNGCIPNAVTFEII 434

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I    ++++ ++AE LL  M  +GLL
Sbjct: 435 IRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 11/251 (4%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           T  I  +N I+  L K         L K+   + ++ + +T +IL++      +   +  
Sbjct: 7   TSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +++K G  P+   +TTL+   C + ++K+   F  + +       + +Y +++ G  
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G    A+K  + +      P+ + Y A+I GLCK   ++EA   Y  M  + I P  +
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 579 TRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
           T  TL   +C  G    A      +IL++++  ++  T + LI  LC E +   A   FH
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY--TFSILIDALCKEGK--NAKQIFH 242

Query: 634 KL--LGKDQNV 642
            +  +G + NV
Sbjct: 243 AMVQMGVNPNV 253


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 248/538 (46%), Gaps = 66/538 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  + +IG ++    ++  +   G+PL    LN +V   CE+GLV  A ++ ++    G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAML-----DRGAILDN--------------- 258
           V  D  +Y  +V A+C+ G + +A+  ++ +L     D   +L++               
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 259 -ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-WTEKAF 316
             T T LI A+C    RG I   F L E+M+  G  P+V T + ++ GLC+ G  TE A 
Sbjct: 236 VVTWTTLIAAYCKH--RG-IDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA- 291

Query: 317 RLFLKLVRSDNYKPNVHTYTAMIS-----------------------------------G 341
            + L+ + +    PN  +YT +IS                                   G
Sbjct: 292 -MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 350

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             K  K   AE + + + +  L+PN  TYT+L+ GHCKVG+ E A  ++  M KE   PN
Sbjct: 351 LFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPN 410

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +++II+G  KKG + +A E+L+K  Q  +  +   Y ILL  + +  + + A G + 
Sbjct: 411 VVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYK 470

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M   GL  +   +  L+    R   MKE++   ++ ++ G++     Y+S++ GY ++G
Sbjct: 471 EMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEG 530

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N S+A+   Q M +     D + Y AL  GL +  K  E    +  MI  G++P  VT  
Sbjct: 531 NESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYN 589

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
           ++   Y  QG +  A+ +L  +     +    T N LI  LC    +       H++L
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEML 647



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 222/475 (46%), Gaps = 25/475 (5%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +V  F + G   +GF ++ EM   G+   + T N +V   C++GLV+YAE +  
Sbjct: 75  HVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMG 134

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            +   GV  DA     +V  YC +G V+ A   +      G   D  T   L+ AFC   
Sbjct: 135 NLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCK-- 192

Query: 273 FRGSIKQAFELLEEMVR---------------KGW------KPNVYTHTVLIDGLCKKGW 311
            RG + +A  ++ E++                + W      +P V T T LI   CK   
Sbjct: 193 -RGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRG 251

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            +  F L+ +++ S    P+V T ++++ G C+  K+  A MLL  M   GL PN  +YT
Sbjct: 252 IDDFFSLYEQMIMS-GVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYT 310

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           ++I    K G    A++    M   G + ++     ++DGL K G+ +EA E+ +   + 
Sbjct: 311 TIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKL 370

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  + +TYT LL  H K  + + A  +  +M K  + P++  ++++I  + ++  + ++
Sbjct: 371 NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKA 430

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            +  ++ +   + P    Y  ++ GY R G   +A  +++ M   G   +NI +  L++ 
Sbjct: 431 VEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNN 490

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           L +   + EA    + ++ KGI        +L   Y K+G+ + A+ +++ + +K
Sbjct: 491 LKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEK 545



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 203/475 (42%), Gaps = 42/475 (8%)

Query: 167 GRLKEG-----FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           G  KEG      S+V EMT   +       N +      LG  E  + VF  M   G+  
Sbjct: 525 GYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTP 583

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  +Y  ++  Y   G+   A   L+ M   G + +  T  +LI   C  G   +I++  
Sbjct: 584 DCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTG---AIEKVI 640

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            +L EM+  G+ P    H  L+    +    +   ++  KLV       N   Y  +I+ 
Sbjct: 641 SVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDM-GLNLNQMVYNTLITV 699

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C+     +A ++L  M  +G+  +  TY +LI G+C   + E+A++    M   G +PN
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPN 759

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           I  YNA+++GL   G +++A +L+ +  +R L  +  TY IL+S H +    + ++ L+C
Sbjct: 760 ITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYC 819

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+  G  P    Y  LI  + +  KM+++ +   E +T G  P   TY  +ICG+ +  
Sbjct: 820 EMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK-- 877

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
                         + C P+       +  L K S  +EA +    M  KG  P E T +
Sbjct: 878 --------------LSCQPE-------MDRLLKLSYQNEAKKLLREMCEKGHVPSESTLM 916

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            ++  +   G            D K  ++TV  L R    E    +A   F ++L
Sbjct: 917 YISSNFSAPGKRD---------DAKRLLKTVIGLYRSTAEEATEKIAQFCFAQIL 962



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 44/456 (9%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E A   + EM + G+  +   + +++    R G + EA   +  +L +G  LD    + L
Sbjct: 463 EAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSL 522

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +  +  +G   +   A  +++EM  K  + +V  +  L  GL + G  E    +F +++ 
Sbjct: 523 MDGYFKEGNESA---ALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIE 578

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                P+  TY ++++ Y  + K   A  LL  MK  G++PN  TY  LI G CK G  E
Sbjct: 579 L-GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIE 637

Query: 385 RAYDLMDLMGKEGCTP-----------------------------------NIYAYNAII 409
           +   ++  M   G  P                                   N   YN +I
Sbjct: 638 KVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLI 697

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             LC+ G  ++A  +L +   + + AD +TY  L+  +   +  ++A   + +M+ +G++
Sbjct: 698 TVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGIS 757

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+I  Y  L+        M++++K   E    GL P   TY  ++ G+ R GN   ++K 
Sbjct: 758 PNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKL 817

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           +  M   G  P   TY  LI    K  K+ +A +    M+ +G  P   T   L   +CK
Sbjct: 818 YCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
                +    ++ L K  +      L+R++C +  V
Sbjct: 878 ----LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHV 909



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 178/404 (44%), Gaps = 52/404 (12%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL---------------------------- 306
           G + Q   L  EMV  G  PNV++  +L+  L                            
Sbjct: 24  GFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVW 83

Query: 307 --CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             CK+G  ++ F L  ++V+      +V T   ++ GYC+   +  AE ++  +   G+ 
Sbjct: 84  GFCKRGLADQGFGLLSEMVKKGVCFDSV-TCNILVKGYCQIGLVQYAEWIMGNLVGGGVP 142

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
            +     +L+ G+C+VG   RA DL++   K G  P+I  YN +++  CK+G + +A  +
Sbjct: 143 LDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESV 202

Query: 425 LKKAFQ---------------------RELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           + +                        R+LQ   +T+T L++ + K         L+ +M
Sbjct: 203 VNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQM 262

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           + +G+ PD+   ++++   CR  K+ E+    +E    GL P   +YT++I   L+ G +
Sbjct: 263 IMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRV 322

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A  +  +M   G + D +    ++ GL K  K  EA + +++++   + P  VT   L
Sbjct: 323 MEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTAL 382

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
              +CK GD   A  +L+ ++K+  +  V T    +    + GM
Sbjct: 383 LDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGM 426



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 56/303 (18%)

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF---------------- 383
           SG+  + K+  +EM+L      G++PN  +   L++  CKVG+                 
Sbjct: 23  SGFVSQVKVLYSEMVL-----CGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVT 77

Query: 384 --------------ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
                         ++ + L+  M K+G   +    N ++ G C+ G VQ A  ++    
Sbjct: 78  YNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV 137

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              +  D I    L+  + +     +AL L     K G+ PDI  Y TL+ AFC++  + 
Sbjct: 138 GGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLA 197

Query: 490 ESEKFFQEAI------TAGLF---------------PTKETYTSMICGYLRDGNISSAVK 528
           ++E    E +       +G+                PT  T+T++I  Y +   I     
Sbjct: 198 KAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFS 257

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +++M   G  PD +T  +++ GLC+  KL EA      M   G+ P  V+  T+     
Sbjct: 258 LYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALL 317

Query: 589 KQG 591
           K G
Sbjct: 318 KSG 320



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 138/344 (40%), Gaps = 34/344 (9%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+   L+P+   +  L+Y     G   +   L   M   G  PN+++ N ++  LCK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A   L+ +       D +TY  ++    K+    Q  GL   MVK G+  D      
Sbjct: 61  LGLALGYLRNSV-----FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+  +C+   ++ +E      +  G+        +++ GY   G +S A+   +   + G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIG---------------------KGISPC 576
             PD +TY  L++  CK+  L +A      ++G                     + + P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 577 EVTRVTLAYEYCKQGD-----SATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
            VT  TL   YCK        S    +I+  +     + T ++++  LC   ++  AA+ 
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPD--VVTCSSILYGLCRHGKLTEAAML 293

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNKY-ALFSDLSQRIAEGI 674
             ++     + + VS   + +A  +S +    F+  SQ +  GI
Sbjct: 294 LREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGI 337


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 224/477 (46%), Gaps = 7/477 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T + VV   C+   ++ AE    +M  +G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  Y   G+  EA R    M  +  + D   L  L+ + C  G    IK
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG---KIK 343

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  P+V+++T++++G   KG       LF  L+  D   P + T+  +
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNVL 402

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAY+ +I G C  G + +A EL+ +     ++ D + +  +++   K      A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F   V  GL+PD   Y  L+  +C   KM+++ + F   ++AG+ P    Y +++ GY 
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G I   +  F+ M Q G  P  I Y  +I GL +  +   A   +  M   GI+  + 
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 579 TRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
           T   +     K      A+ +   L +++ K+ I T+NT+I  +   +RV  A   F
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+  +  T N ++      G+++ A  +F+EM   G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  ++ A CR+G++ +A    + M+D+G + D      LI  FC     GS+ 
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT---HGSLL 483

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G + ++     +I+ LCK G    A  +F  L  +    P+   Y  +
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNML 542

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M ++G 
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN IIDGL + GR   A     +  +  +  +K TY+I+L    K     +A+ 
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  DI    T+IA   + ++++E++  F     +GL P   TY+ MI   +
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLI 722

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC PD+     ++  L K++++  A  +   +  +  S   +
Sbjct: 723 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 782

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 783 TAMLLVDLFSSKG 795



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 234/543 (43%), Gaps = 86/543 (15%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTL 263
           E A   F ++   G+  DA     ++  +C   R  EA D  L    + G + D  +  +
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           L+ + C++G  G   QA +LL  M   G    P+V  +  +IDG  K+G   KA  LF +
Sbjct: 190 LLKSLCNQGKSG---QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 246

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +V+     P++ TY++++   CK   M++AE  L +M  +G+LP+  TY +LIYG+   G
Sbjct: 247 MVQR-GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
            ++ A  +   M ++   P++ A N ++  LCK G+++EA ++      +    D  +YT
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365

Query: 442 ILLSEHLKQ-----------------------------------AETKQALGLFCRMVKA 466
           I+L+ +  +                                       +A+ +F  M   
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN---- 522
           G+ P +  Y T+IAA CR  KM ++ + F + I  G+ P K  Y  +I G+   G+    
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485

Query: 523 -------------------------------ISSAVKYFQRMNQIGCAPDNITYGALISG 551
                                          +  A   F     +G  PD + Y  L+ G
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIR 610
            C   K+++A + +++M+  GI P  V   TL   YCK G     + +  E L K +   
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605

Query: 611 TV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALF 663
           T+  N +I  L    R   A + FH++      +++ + + +     KN C++   + LF
Sbjct: 606 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF-LF 664

Query: 664 SDL 666
            +L
Sbjct: 665 KEL 667



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 202/483 (41%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM    +      LN ++G  C+ G ++ A +VFD M  +G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY +M+  Y   G + +       ML  G      T  +LI A+ + G    + 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM---LD 413

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI-DQGVVPDKYAYHCL 472

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+   Y  L+ G+C VG  E+A  + D M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  Q+ ++   I Y I++    +   T  A   F  M ++G+  +   Y+ ++    
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 652

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++ G  P  +
Sbjct: 653 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAV 712

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 713 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772

Query: 604 DKK 606
           D++
Sbjct: 773 DER 775



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 217/479 (45%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 46  RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSG-PALAVALFNRAASRAQ 104

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  +D    + L+  FC+    
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA--- 161

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++ +L+  LC +G + +A  L   +        
Sbjct: 162 ---KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCS 218

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I G+ KE  +N+A  L + M ++G+ P+  TY+S+++  CK    ++A   
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +G  P+ + YN +I G    G+ +EA  + K+  ++ +  D +    L+    K
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NPD+ +YT ++  +  +  + +    F   +  G+ P   T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 398

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  P  +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G+ P +     L   +C  G    A  +I E ++  + +  V   ++I  LC   RV
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 39/324 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++  F   G L +   ++ E+ NNG+ L       ++   C+LG V  A+ +FD    
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  DA  Y +++  YC +G++ +A R   AM+  G   +      L+  +C     G 
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI---GR 586

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT------------------------ 312
           I +   L  EM++KG KP+   + ++IDGL + G T                        
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 313 -----------EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                      ++A  LF K +R+ N K ++ T   MI+G  +  ++  A+ L   +   
Sbjct: 647 VLRGLFKNRCFDEAIFLF-KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL+P   TY+ +I    K G  E A D+   M   GC P+    N ++  L KK  +  A
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 422 YELLKKAFQRELQADKITYTILLS 445
              L K  +R    + +T  +L+ 
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 6/266 (2%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           G    +P  Y Y  ++D   +  R + A     +  +  L+ D I  + LL    +   T
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 454 KQALG-LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF--PTKETY 510
            +AL  L  R  + G  PD+ +Y  L+ + C Q K  +++   +     G    P    Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I G+ ++G+++ A   F+ M Q G  PD +TY +++  LCK   +D+A  F   M+ 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGM 627
           KG+ P   T   L Y Y   G    A+ + + + ++  +  V   NTL+  LC   ++  
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA 653
           A   F  +  K QN D  S   + N 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNG 370


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 210/436 (48%), Gaps = 7/436 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +  E  +L   +  + EM + GL L  S ++  +   C  G ++   ++  EM
Sbjct: 188 VCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEM 247

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  +Y +++ + C+M  + EA   L  M   G  LD+ +++ ++  +C     
Sbjct: 248 KYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCK---V 304

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G  ++A ++LE        PN++     I  LC  G   KA ++F  +       P+  +
Sbjct: 305 GKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEM-GLIPDCFS 360

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT M++GYCK + ++ A   L +M ++G+ P+  TYT LI   CK GN E A  L   M 
Sbjct: 361 YTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMI 420

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            EG  P++ +YN +++G  KKG +Q+A+ELL       +  D +TY IL+   +K+    
Sbjct: 421 TEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVN 480

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  +   + + G +PD+  +T +I  F  +   +E+   F       L P   T ++++
Sbjct: 481 EAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALL 540

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY R   ++ A   F +M   G   D I Y +LI G C    +D+AC     MI  GI 
Sbjct: 541 NGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIM 600

Query: 575 PCEVTRVTLAYEYCKQ 590
           P  +T   L   Y K+
Sbjct: 601 PNNITHHALVLGYEKK 616



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 197/415 (47%), Gaps = 8/415 (1%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
           N  PLI    N ++    E   +  A +   EM ++G+  +AS   L +  YC  G +  
Sbjct: 181 NIFPLI-GVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDT 239

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
             + L  M   G   D    T++I + C       +K+A  +L +M + G   +  + + 
Sbjct: 240 GWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL---LKEATSILFKMTQMGVFLDSVSVSS 296

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           ++DG CK G +E+A    + ++   N  PN+  + + IS  C +  M +A  + + M E 
Sbjct: 297 VVDGYCKVGKSEEA----MDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEM 352

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL+P+  +YT+++ G+CKV +   A   +  M K G  P++  Y  +ID  CK G ++ A
Sbjct: 353 GLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMA 412

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L ++     L  D ++Y  L++ + K+   ++A  L   M  AG++PD+  Y  LI  
Sbjct: 413 EYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHG 472

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
             ++  + E++    E    G  P   T+T++I G+   GN   A   F  M++    PD
Sbjct: 473 LIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPD 532

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            +T  AL++G C+   + EA   +  M+  G+    +   +L + +C  G+   A
Sbjct: 533 VVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDA 587



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 195/389 (50%), Gaps = 17/389 (4%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A++ L+EM  +G   N    ++ I G C +G  +  ++L +++ +    KP+V  YT +I
Sbjct: 205 AWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEM-KYLGIKPDVVAYTIVI 263

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK   +  A  +L +M + G+  ++ + +S++ G+CKVG  E A D++++      +
Sbjct: 264 DSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFN---LS 320

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PNI+ +N+ I  LC  G + +A ++ +   +  L  D  +YT +++ + K  +   AL  
Sbjct: 321 PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKY 380

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             +M+K G+ P +  YT LI + C+   M+ +E  FQ  IT GL P   +Y +++ GY +
Sbjct: 381 LGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGK 440

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G++  A +    M   G +PD +TY  LI GL K+  ++EA    + +  +G SP  VT
Sbjct: 441 KGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVT 500

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              +   +  +G+   A ++   + +      + T + L+   C  + +  A + FHK+L
Sbjct: 501 FTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKML 560

Query: 637 GKDQNVDRV----------SLAALKNACY 655
                 D +          SL  + +AC+
Sbjct: 561 DAGLKADVILYNSLIHGFCSLGNIDDACH 589



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 37/326 (11%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHT-YTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           ++GW      +FLK+  +   +  + T Y  +++ Y KE     A  L+ +M+   + P 
Sbjct: 130 EEGW----HNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPL 185

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
                SL+    +      A+D +  M  +G   N    +  I G C +G +   ++LL 
Sbjct: 186 IGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLM 245

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG------------------- 467
           +     ++ D + YTI++    K +  K+A  +  +M + G                   
Sbjct: 246 EMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVG 305

Query: 468 -------------LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
                        L+P+I  + + I+  C    M ++ K FQ+    GL P   +YT+M+
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY +  +IS+A+KY  +M + G  P   TY  LI   CK   ++ A   ++ MI +G+ 
Sbjct: 366 AGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLV 425

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIIL 600
           P  V+  TL   Y K+G    A  +L
Sbjct: 426 PDVVSYNTLMNGYGKKGHLQKAFELL 451



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%)

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y +L++ ++K+  T+ AL L C+M    + P I    +L+ A    +++  +  F +E 
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            + GL       +  I GY   GNI +  K    M  +G  PD + Y  +I  LCK S L
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
            EA      M   G+    V+  ++   YCK G S  AM +LE  +    I   N+ I K
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISK 332

Query: 619 LCSEKRVGMAALFFHKL 635
           LC++  +  AA  F  +
Sbjct: 333 LCTDGNMLKAAKVFQDM 349


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 211/432 (48%), Gaps = 21/432 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +G +   FS++ ++   G    T TL  ++   C  G V  A    D + ARG
Sbjct: 89  VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARG 148

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY +++   C+MG    A + L  +  +    +    + +I + C +     + 
Sbjct: 149 FRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKL---VT 205

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+EL  +M+ K   P+V T + LI G C  G  ++AF LF ++V + N  P+V T+  +
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLT-NINPDVCTFNIL 264

Query: 339 ISGYCKE-----------------EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +   CKE                  ++N+A+ +   + ++ + P+ ++YT +I   CK+ 
Sbjct: 265 VDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIK 324

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             + A  L + M  +G TP+   Y+++IDGLCK  R+  A+ELL +   R   AD ITYT
Sbjct: 325 MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYT 384

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
             L    K  +  +A+ L  ++   G+ P+I+ Y  LI   C++ + + ++  FQ+ +  
Sbjct: 385 SFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIK 444

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G   T  TY  MI G   +G    A+   ++M   GC PD +TY  +I  L K  +  +A
Sbjct: 445 GYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKA 504

Query: 562 CQFYESMIGKGI 573
            +    MI +G+
Sbjct: 505 EKLLREMIARGL 516



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 220/513 (42%), Gaps = 51/513 (9%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMV---------IEMTNNGLPLITS------ 189
           S+  F   H  +   +SSF  + R+    S++         ++  NN  P+  S      
Sbjct: 16  SHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQ 75

Query: 190 ---------TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
                    T N V+   C LG +++A  V  ++   G   D  +   ++   C  G+V 
Sbjct: 76  LNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVH 135

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA  +   ++ RG  L+  +  +LI   C     G  + A ++L ++  K    NV  ++
Sbjct: 136 EALHFHDHVIARGFRLNEVSYGILINGLCK---MGETRAALQVLRKIDGKLVNTNVVMYS 192

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            +ID LCK+    +A+ L+ +++      P+V T++A+I G+C   +   A  L   M  
Sbjct: 193 TIIDSLCKEKLVTEAYELYSQMI-VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVL 251

Query: 361 QGLLPNTNTYTSLIYGHCK-----------------VGNFERAYDLMDLMGKEGCTPNIY 403
             + P+  T+  L+   CK                 V    +A  + +++GK   TP+++
Sbjct: 252 TNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVH 311

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           +Y  II  LCK   V EA  L  +   + +  DK+TY+ L+    K      A  L  +M
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              G   D+  YT+ + A C+  ++ ++    ++    G+ P   TY  +I G  ++G  
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A   FQ +   G      TY  +I+GLC +   DEA    E M   G +P  VT  T+
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491

Query: 584 AYEYCKQGDSATA------MIILESLDKKLWIR 610
                K  ++  A      MI    L++K+ IR
Sbjct: 492 IRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 21/383 (5%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L   +      P++ T   +I+  C  G  + AF +  K+++   Y P+  T T +I
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKM-GYHPDTITLTTLI 125

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G C   K++ A    + +  +G   N  +Y  LI G CK+G    A  ++  +  +   
Sbjct: 126 KGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVN 185

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N+  Y+ IID LCK+  V EAYEL  +   +++  D +T++ L+       + K+A GL
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGL 245

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF--------QEAITAGLF------- 504
           F  MV   +NPD+  +  L+ A C++   KE++           Q      +F       
Sbjct: 246 FHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRR 305

Query: 505 --PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P   +YT +I    +   +  A+  F  M   G  PD +TY +LI GLCK  ++  A 
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATAMI-ILESLDKKLWIRTVNTLIRKL 619
           +  + M  +G     +T  +  +  CK  Q D A A++  ++    +  I T N LI  L
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425

Query: 620 CSEKRVGMAALFFHKLLGKDQNV 642
           C E R   A + F  LL K   V
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKV 448



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 24/352 (6%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR--AEMLLERMKEQGLLPNTNTYTS 372
           A   F +++R  N  P++  +  ++    K    N   A  L  R++   + P+  T+ +
Sbjct: 30  AISSFYRMLRM-NPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNT 88

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I  +C +G  + A+ ++  + K G  P+      +I GLC  G+V EA         R 
Sbjct: 89  VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARG 148

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + ++++Y IL++   K  ET+ AL +  ++    +N ++  Y+T+I + C++K + E+ 
Sbjct: 149 FRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAY 208

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + + + I   + P   T++++I G+   G    A   F  M      PD  T+  L+  L
Sbjct: 209 ELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           CK+    E       M+       EV +V  A              +   + K+     V
Sbjct: 269 CKEGSTKETKNVLAVMMK------EVNQVNKAKH------------VFNIIGKRRVTPDV 310

Query: 613 NT---LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA 661
           ++   +I++LC  K V  A   F+++  K    D+V+ ++L +   +S + +
Sbjct: 311 HSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERIS 362


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 197/405 (48%), Gaps = 4/405 (0%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   V+   C+ GL     ++F EM   G+C +   Y  ++   CR+G++ EA      M
Sbjct: 81  TYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEM 140

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + +G   +  T   LI A C  G     K+A     +MV +G  P+V T T LID L KK
Sbjct: 141 VSQGIKANVITYNSLIHASCRFGLW---KEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++A+++F  +++     PN+ TY ++++G C   +M+ A  L E M E+G+  +  +
Sbjct: 198 GKVQEAYKIFELMIKQGE-APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVIS 256

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +LI G+C  G  E A  L   M  E  TP+I  Y  ++  L + GR++ A EL     
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
                    TYT+LL    K    ++A+ +F  +      P I  Y+ LI    + ++ +
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + + F E  T GL P   TY  MI G  ++G +  A + F +M + GC  D I++  +I
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
            G  +++++ +A +F + M  K  SP +   + L   Y     S+
Sbjct: 437 RGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSS 481



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 198/384 (51%), Gaps = 4/384 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  + G   +G  M  EM N G+       + ++   C +G +  A  +FDEM ++G
Sbjct: 85  VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + A+  +Y  ++ A CR G   EA R  S M+  G + D  T T LI     KG    ++
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKG---KVQ 201

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+++ E M+++G  PN+ T+  L++GLC     + A RLF  +V     K +V +Y  +
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVER-GIKIDVISYNTL 260

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC   K   A  L  +M+ + L P+  TYT L+    + G    A +L + M   G 
Sbjct: 261 INGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ 320

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P++  Y  ++DGLCK G ++EA ++ +     + +     Y+IL+    +    + A+ 
Sbjct: 321 SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAME 380

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F  +   GL P+I  Y  +I   C++ K+ E+E+ F +   +G    + ++  +I G+L
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFL 440

Query: 519 RDGNISSAVKYFQRMNQIGCAPDN 542
           ++  +  A+++ +RM +   +P++
Sbjct: 441 QENQVQKAMEFLKRMREKNFSPND 464



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 220/453 (48%), Gaps = 7/453 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T++ +V   C  G V  A E+FD+M   G   D   Y  ++ A  +  +   A      M
Sbjct: 11  TVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRM 70

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L      +  T  L+I + C  G   +IK   ++  EM+  G  PNV  ++ LI+GLC+ 
Sbjct: 71  LSEICSGNFFTYGLVIDSLCKDGL--AIK-GLKMFREMINMGICPNVIVYSSLINGLCRV 127

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  LF ++V S   K NV TY ++I   C+      A     +M  +G+LP+  T
Sbjct: 128 GKLREAVNLFDEMV-SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +T+LI    K G  + AY + +LM K+G  PNI  YN++++GLC   ++  A  L +   
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +R ++ D I+Y  L++ +    +T++A+ LF +M    L P I  YT L+ A  +  +++
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +++ F      G  P+ +TYT ++ G  ++G I  A+  F+ +  I   P    Y  LI
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
            G+ +  + + A + ++ +   G+ P  VT   +    CK+G    A  +   +++    
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCE 426

Query: 610 R---TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
           +   + N +IR    E +V  A  F  ++  K+
Sbjct: 427 QDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 206/447 (46%), Gaps = 7/447 (1%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           +V   C  G+V +A      M   G   D      LI A   +  R + ++A EL   M+
Sbjct: 15  LVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINAL--RKTRQA-RRAVELHRRML 71

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
            +    N +T+ ++ID LCK G   K  ++F +++      PNV  Y+++I+G C+  K+
Sbjct: 72  SEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM-GICPNVIVYSSLINGLCRVGKL 130

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A  L + M  QG+  N  TY SLI+  C+ G ++ A      M  EG  P++  +  +
Sbjct: 131 REAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           ID L KKG+VQEAY++ +   ++    + +TY  LL+      +   A+ LF  MV+ G+
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
             D+ +Y TLI  +C   K +E+   F++     L P+  TYT ++    ++G I +A +
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F  M   G +P   TY  L+ GLCK   ++EA   + S+      P       L     
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMF 370

Query: 589 KQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           +     +AM I + +        I T N +I  LC E ++  A   F ++       D +
Sbjct: 371 QARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEI 430

Query: 646 SLAALKNACYESNKYALFSDLSQRIAE 672
           S   +     + N+     +  +R+ E
Sbjct: 431 SFNFIIRGFLQENQVQKAMEFLKRMRE 457



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 167/337 (49%), Gaps = 8/337 (2%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y+PN+ T + ++ G C E K+  A  L ++M   G   +   Y  LI    K     RA 
Sbjct: 5   YQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAV 64

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L   M  E C+ N + Y  +ID LCK G   +  ++ ++     +  + I Y+ L++  
Sbjct: 65  ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +  + ++A+ LF  MV  G+  ++  Y +LI A CR    KE+ + F + +  G+ P  
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+T++I    + G +  A K F+ M + G AP+ +TY +L++GLC   ++D A + +E 
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKR 624
           M+ +GI    ++  TL   YC  G +  AM +   +  +    ++ T   L++ L    R
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304

Query: 625 VGMAALFFH--KLLGKDQNVD--RVSLAAL-KNACYE 656
           +  A   F+  ++ G+  ++D   V L  L KN C E
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIE 341



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 176/376 (46%), Gaps = 4/376 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++    +G+L+E  ++  EM + G+     T N ++  +C  GL + A   F +M
Sbjct: 116 VYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM 175

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  ++  ++    + G+V EA +    M+ +G   +  T   L+   C     
Sbjct: 176 VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLC---LH 232

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  L E MV +G K +V ++  LI+G C  G TE+A  LF K+ + +   P++ T
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM-QYEELTPSITT 291

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++    +  ++  A+ L   M+  G  P+ +TYT L+ G CK G  E A D+   + 
Sbjct: 292 YTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLK 351

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
                P+I  Y+ +I G+ +  R + A E+  +     L  + +TY I+++   K+ +  
Sbjct: 352 SIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLL 411

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  LF +M ++G   D  ++  +I  F ++ +++++ +F +        P       ++
Sbjct: 412 EAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471

Query: 515 CGYLRDGNISSAVKYF 530
             Y  D   S     F
Sbjct: 472 NLYAADAQSSELPNNF 487



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 1/309 (0%)

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           ++ G++PN+ T + L+ G+C +G    A  LF K+ RS  ++ ++  Y  +I+   K  +
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRS-GFQGDILLYGYLINALRKTRQ 59

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
             RA  L  RM  +    N  TY  +I   CK G   +   +   M   G  PN+  Y++
Sbjct: 60  ARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSS 119

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I+GLC+ G+++EA  L  +   + ++A+ ITY  L+    +    K+A   F +MV  G
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + PD+  +TTLI    ++ K++E+ K F+  I  G  P   TY S++ G      +  AV
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           + F+ M + G   D I+Y  LI+G C   K +EA   +  M  + ++P   T   L    
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 588 CKQGDSATA 596
            + G   TA
Sbjct: 300 YQNGRIRTA 308



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 3/303 (0%)

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + G  PN  T ++L+ G C  G    A +L D M + G   +I  Y  +I+ L K  + +
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A EL ++        +  TY +++    K     + L +F  M+  G+ P++  Y++LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              CR  K++E+   F E ++ G+     TY S+I    R G    A + F +M   G  
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAM 597
           PD +T+  LI  L K+ K+ EA + +E MI +G +P  VT  +L    C   Q D A  +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 598 I-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
             ++     K+ + + NTLI   C+  +   A   F K+  ++      +   L  A Y+
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 657 SNK 659
           + +
Sbjct: 302 NGR 304



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 9/193 (4%)

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +K+G  P++   +TL+   C + K+ ++ + F +   +G       Y  +I    +    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             AV+  +RM    C+ +  TYG +I  LCK     +  + +  MI  GI P  +   +L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGM---AALFFHKLLG 637
               C+ G    A+ + + +     K  + T N+LI   C   R G+   A   F +++G
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC---RFGLWKEATRTFSQMVG 177

Query: 638 KDQNVDRVSLAAL 650
           +    D V+   L
Sbjct: 178 EGILPDVVTFTTL 190


>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 375

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 190/381 (49%), Gaps = 6/381 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G  + AE V++EM    V  DA  Y  M+  Y R+GR+      L  ++ R    + 
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFE-LWELMGRKGSRNV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A+  +++    D    G + Q   + E M+  G+  +  T+ +L+DGLCK G+  K+  +
Sbjct: 60  ASFNIMMRGLFD---NGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L++        +  +Y+AMI+G CKE K++ A  +L  M + G  PNT+ Y +LI G  
Sbjct: 117 -LEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFV 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               FE A  +   MG   C+PNI  YN +I+GLCK  R  EAY+L+K+  ++  +    
Sbjct: 176 GASKFEDATRVFREMGTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVS 234

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+       +   A+ L+ +++  G  PD+  +  LI   C   K + +   +   
Sbjct: 235 TYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNM 294

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   TY +++ G+ +DG++ +A+  +  + + G  PD I+Y   + GLC  +++
Sbjct: 295 NXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRI 354

Query: 559 DEACQFYESMIGKGISPCEVT 579
             A  F    + K + P  +T
Sbjct: 355 SGAILFLHDAVTKKLVPTIIT 375



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 6/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G    A  +  EM      P+   +  +++G  + G  +  F L+  + R  +   NV +
Sbjct: 4   GDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGS--RNVAS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G     ++++   + E M E G   ++ TY  L+ G CK G   ++  ++++  
Sbjct: 62  FNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G   + ++Y+A+I+GLCK+ ++ EA  +L    +   + +   Y  L++  +  ++ +
Sbjct: 122 GKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFE 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F R +    +P+I  Y TLI   C+ ++  E+    +E +  G  P   TY+ ++
Sbjct: 182 DATRVF-REMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLM 240

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G      +  A+  + ++   G  PD   +  LI GLC   K   A   Y +M     +
Sbjct: 241 KGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCA 300

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   + K GD   A+ I   + +      I + N  ++ LCS  R+  A LF
Sbjct: 301 PNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAILF 360

Query: 632 FHKLLGK 638
            H  + K
Sbjct: 361 LHDAVTK 367



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 41/325 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   M++ +  +GR+K  F +   M   G   + S  N ++    + G V+    +++ M
Sbjct: 27  VYNAMLNGYFRVGRIKNCFELWELMGRKGSRNVAS-FNIMMRGLFDNGEVDQVISIWELM 85

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D+ +Y ++V   C+ G   ++   L     +G +LD  + + +I   C +   
Sbjct: 86  IENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEA-- 143

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +A  +L  MV+ G KPN + +  LI+G       E A R+F ++    +  PN+ T
Sbjct: 144 -KLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREM--GTHCSPNIVT 200

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT----------------------- 371
           Y  +I+G CK E+   A  L++ M E+G  P  +TY+                       
Sbjct: 201 YNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVI 260

Query: 372 ------------SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                        LI+G C VG  + A  L   M    C PN+  YN +++G  K G ++
Sbjct: 261 AKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLR 320

Query: 420 EAYELLKKAFQRELQADKITYTILL 444
            A  +     +  LQ D I+Y I L
Sbjct: 321 NALAIWAHILRNGLQPDIISYNITL 345



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 34/261 (13%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  + + M +   +P+   YNA+++G  + GR++  +EL +    R+   + 
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWE-LMGRKGSRNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            ++ I++       E  Q + ++  M++ G   D   Y  L+   C+     +S    + 
Sbjct: 60  ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G      +Y++MI G  ++  +  AV     M + GC P+   Y ALI+G    SK
Sbjct: 120 AEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            ++A + +  M G   SP                                 I T NTLI 
Sbjct: 180 FEDATRVFREM-GTHCSPN--------------------------------IVTYNTLIN 206

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
            LC  +R G A     ++L K
Sbjct: 207 GLCKGERFGEAYDLVKEMLEK 227


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 248/521 (47%), Gaps = 12/521 (2%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
             C++ S+   G++ E FS+  +M   G  P + +  N + G+ C+ G +  A++    + 
Sbjct: 508  NCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGL-CQGGHLVQAKQFMFCLL 566

Query: 216  ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
                  D  ++  +++  C+ G + EA      M+    + D  T T+L++ FC KG   
Sbjct: 567  DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKG--- 623

Query: 276  SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             I  A  +L+ M+ KG  P+   +T L++GL  +G  + A  +F +++  +    +   Y
Sbjct: 624  KILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 683

Query: 336  TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++++GY K   +N  + ++  M +  + PN+ +Y  L++G+ K G F ++  L   M +
Sbjct: 684  NSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 743

Query: 396  EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            +G  P+   Y  +I GL + G +  A + L+K     +  DK+ + IL++   ++++   
Sbjct: 744  KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHN 803

Query: 456  ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
            AL LF  M    L+P    ++ +I    R+  + +S +   E +  GL P    Y +++ 
Sbjct: 804  ALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVN 863

Query: 516  GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
               R G I  A +  + M  IG  P  +   ++I GLC+  KL+EA   + +M+  G+ P
Sbjct: 864  AKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVP 923

Query: 576  CEVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
               T  TL +  CK+   A A+    ++E    K+ + + N LI  LC +K +  A   +
Sbjct: 924  TVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLY 983

Query: 633  HKLLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
             ++  K    +  +   L  A Y +    N   L  D+ +R
Sbjct: 984  GEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEER 1024



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 258/572 (45%), Gaps = 65/572 (11%)

Query: 88  LQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNG 147
           ++I I +  H QA++V+  LA    S  A+           F   +R+      S   + 
Sbjct: 40  VRILIQAQMHSQAMSVLKHLAVTGFSCTAI-----------FTSLLRI-----ISRFDST 83

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N    H V + ++ ++ +  ++ +    V  M + G        N ++    E G  +Y 
Sbjct: 84  N----HVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYV 139

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLIT 266
                E  AR    D ++  +++ + C  G   +A+  L  M  +   L N AT   ++ 
Sbjct: 140 WLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCCLSNSATYNTILH 197

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +  KG     K A  +LE+M R   + ++YT+ ++ID LC+   + +AF L LK +R D
Sbjct: 198 WYVKKG---RFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF-LLLKRMRKD 253

Query: 327 NYKPN-----------------------------------VHTYTAMISGYCKEEKMNRA 351
           +  P+                                   V TYT MI GYC+  ++++A
Sbjct: 254 DLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKA 313

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             +L  M+  G++P+  TY++L+ G+CKV     A DLM  +   G T N      +IDG
Sbjct: 314 LSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDG 373

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            C+ G + +A ++LK   +  +  D +TY+ L++   + A+  +   +  RM K+G+ P+
Sbjct: 374 FCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPN 433

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              YTTLI  +C+   +K + K F +    GL      + +++  + R+G I+ A  + Q
Sbjct: 434 DVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQ 493

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M+++  + +++++  +I   C + K+ EA   Y+ M+  G SP   T   L    C+ G
Sbjct: 494 YMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGG 553

Query: 592 DSATA---MIILESLDKKLWIRTVNTLIRKLC 620
               A   M  L  +   +  +T N L+  +C
Sbjct: 554 HLVQAKQFMFCLLDIPSAVDEKTFNALLLGIC 585



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/537 (25%), Positives = 244/537 (45%), Gaps = 63/537 (11%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
            SL +NG F +A +++Q M S                 ++N      ++T N ++    +
Sbjct: 163 NSLCTNGEFRKAEDMLQKMKSCC---------------LSN------SATYNTILHWYVK 201

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
            G  + A  V ++M    + AD  +Y +M+   CR+ R   A   L  M       D  T
Sbjct: 202 KGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECT 261

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
              LI  F  +G    I  A  +   M+R+   P+V T+T +IDG C+    +KA  + L
Sbjct: 262 YNTLINGFFGEG---KINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSV-L 317

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
             +      P+  TY+A+++GYCK   +  A  L+  +K +G+  N    T LI G C+V
Sbjct: 318 SEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQV 377

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G   +A  ++  M ++G  P++  Y+A+I+G+C+  ++ E  E+L +  +  +  + + Y
Sbjct: 378 GEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLY 437

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGL--NPDIH------------------------- 473
           T L+  + K    K AL  F  + + GL  NP IH                         
Sbjct: 438 TTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSR 497

Query: 474 --------AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
                   ++  +I ++C + K+ E+   + + +  G  P   TY +++ G  + G++  
Sbjct: 498 MNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQ 557

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A ++   +  I  A D  T+ AL+ G+CK   LDEA    E M+     P   T   L  
Sbjct: 558 AKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLS 617

Query: 586 EYCKQGDSATAMIILE-SLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKD 639
            +C++G    A+++L+  L+K +   TV    L+  L +E +V  A+  F +++ K+
Sbjct: 618 GFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 163/339 (48%), Gaps = 4/339 (1%)

Query: 202  GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
            G V   + +  +M    V  +++SY +++  Y + G+ +++      M+ +G   DN T 
Sbjct: 694  GNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 753

Query: 262  TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LLI    + G    I  A + LE+MV +G  P+     +LI    +K     A RLF  
Sbjct: 754  RLLILGLSECGL---IDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLF-N 809

Query: 322  LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
             ++  +  P+  T++AMI+G  ++  ++++  +L  M + GL PN   Y +L+   C+VG
Sbjct: 810  CMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVG 869

Query: 382  NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
              +RA+ L + M   G  P   A ++II GLC+ G+++EA  +     +  +     T+T
Sbjct: 870  EIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFT 929

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
             L+    K+++   AL L   M    L  D+ +Y  LI   C+ K + ++   + E  + 
Sbjct: 930  TLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSK 989

Query: 502  GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            GL+P   TY ++       G + +  +  + + + G  P
Sbjct: 990  GLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 190/391 (48%), Gaps = 12/391 (3%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PLIT+ L R        G V+  E +  EM   G+     +Y  ++    +  +V  A  
Sbjct: 319 PLITALLER--------GFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
             + M   G + D  T   ++  +C  G   ++K+A  LL ++ R G  P V T+  LID
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAG---NLKEALWLLGDLRRAGLAPTVLTYNTLID 427

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C+ G  E+A RL  ++V    + P+V TYT +++G  K   +  A    + M  +GL 
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCF-PDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ 486

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y + I     +G+  +A+ L ++M  +G  P+   YN IIDGLCK G +++A +L
Sbjct: 487 PDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDL 546

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             K     LQ D ITYT L+  H ++    +A  L   MV  GL P +  YT LI   CR
Sbjct: 547 KMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCR 606

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  +  +  +F++ +  G+ P + TY  +I    R G    A  +F  M + G AP+  T
Sbjct: 607 RGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYT 666

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y  LI G C++    +A + Y  M   GI P
Sbjct: 667 YTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 213/449 (47%), Gaps = 21/449 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM--------------VSSFAEIGRLKEGFSMVIEMTN 181
           Y V  + L   G+ E A +++  M              +++  E G +++  ++ +EM N
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMEN 342

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
            G+     T N ++    +   VE A+  F EM A G+  D  +Y  M+  YC+ G + E
Sbjct: 343 EGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKE 402

Query: 242 ADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           A  WL   L R  +     T   LI  +C     G +++A  L EEMV +G  P+V T+T
Sbjct: 403 A-LWLLGDLRRAGLAPTVLTYNTLIDGYCR---LGGLEEARRLKEEMVEQGCFPDVCTYT 458

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L++G  K      A R F   + S   +P+   Y   I         ++A  L E M  
Sbjct: 459 ILMNGSHKVRNLPMA-REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G+ P+T TY  +I G CK GN + A DL   M  +G  P+   Y  +I   C++G + E
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +LL       LQ   +TYTIL+    ++     A G F +M+  G+ P+   Y  LI 
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           A CR  +   +   F E +  GL P K TYT +I G  R+GN + A++ +  M+Q G  P
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMI 569
           D  T+ AL  G  K   +  A ++ E+++
Sbjct: 698 DYCTHNALFKGFDK-GHMYHAIEYLENIV 725



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 224/458 (48%), Gaps = 17/458 (3%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA--ILDNATLTLLITA 267
           V+ EM    +     +Y  ++ ++ + GR  EA   L  M  +G   +L++ T  ++I+ 
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISF 289

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
              +G    ++ A +L++ M R   K + +T+  LI  L ++G+ +K   L +++  ++ 
Sbjct: 290 LAREG---HLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEM-ENEG 344

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P + TY A+I G  K E++  A++    M+  GLLP+  TY S++ G+CK GN + A 
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+  + + G  P +  YN +IDG C+ G ++EA  L ++  ++    D  TYTIL++  
Sbjct: 405 WLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGS 464

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ---EAITAGLF 504
            K      A   F  M+  GL PD  AY T I   C +  + ++ K FQ     +  G++
Sbjct: 465 HKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDTHKAFQLREVMMLKGIY 521

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY  +I G  + GN+  A     +M   G  PD ITY  LI   C++  L EA + 
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIR--TVNTLIRKLCS 621
              M+  G+ P  VT   L +  C++G+  +A     + LD  +     T N LI  LC 
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
             R  +A   FH++L +    ++ +   L +  C E N
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 207/442 (46%), Gaps = 9/442 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ SF + GR  E   ++ EM   G   + +  T N V+      G +E A ++ D M  
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-R 307

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
               A + +Y  ++ A    G V + +     M + G +    T   +I        +  
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL----LKSE 363

Query: 277 IKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             +A +L   EM   G  P++ T+  +++G CK G  ++A  L   L R+    P V TY
Sbjct: 364 QVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA-GLAPTVLTY 422

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I GYC+   +  A  L E M EQG  P+  TYT L+ G  KV N   A +  D M  
Sbjct: 423 NTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLS 482

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  P+ +AYN  I      G   +A++L +    + +  D +TY +++    K    K 
Sbjct: 483 KGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKD 542

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  L  +MV  GL PD   YT LI A C +  + E+ K     ++ GL P+  TYT +I 
Sbjct: 543 AKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIH 602

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
              R GN+ SA  +F++M  +G  P+ ITY  LI  LC+  +   A   +  M+ +G++P
Sbjct: 603 TCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAP 662

Query: 576 CEVTRVTLAYEYCKQGDSATAM 597
            + T   L    C++G+ A A+
Sbjct: 663 NKYTYTLLIDGNCREGNWADAI 684



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 115/288 (39%), Gaps = 41/288 (14%)

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++   N ++  L    R  +   + ++  Q E++   +TY  LL   LK+    +
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 456 ALGLFCRMVKAG---LNPDIHAYTTLIAAFCRQKKMKESEKF--------------FQEA 498
           A  L   M   G   L  D+  Y  +I+   R+  ++ + K               +   
Sbjct: 262 ASMLLKEMETQGGGCLLNDV-TYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPL 320

Query: 499 ITA--------------------GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           ITA                    G+ PT  TY ++I G L+   + +A   F  M  +G 
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD ITY ++++G CK   L EA      +   G++P  +T  TL   YC+ G    A  
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440

Query: 599 ILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           + E + ++     V T   L+      + + MA  FF ++L K    D
Sbjct: 441 LKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPD 488


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 194/399 (48%), Gaps = 12/399 (3%)

Query: 255 ILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           IL N  +  L+I + C  G    +  A EL  EM  +   P+ YT+  L+DGLCK    +
Sbjct: 177 ILPNVLSFNLIIKSMCKLGL---VDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRID 233

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A  L L  ++ +   P+  T+  +I+G CK+    R   L++ M  +G +PN  TY +L
Sbjct: 234 EAVSL-LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I+G C  G  ++A  L+D M    C PN   Y  II+GL K+GR  +   +L    +R  
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             ++  Y++L+S   K+ ++++A+ LF   +  G   +   Y+ L+   CR +K  E+ K
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              E    G  P   T++S++ G+   GN   A++ ++ M +I CA + + Y  LI GLC
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA------MIILESLDKKL 607
           K  K+ EA   +  M+  G  P  V   ++    C  G    A      M+ LE  D + 
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP-DSQP 531

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            + T N L   LC +  +  A    + +L +  + D V+
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 193/400 (48%), Gaps = 7/400 (1%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
           N LP + S  N ++   C+LGLV+ A E+F EM  R    DA +Y  ++   C++ R+ E
Sbjct: 176 NILPNVLS-FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDE 234

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A   L  M   G     AT  +LI   C K   G   +  +L++ M  KG  PN  T+  
Sbjct: 235 AVSLLDEMQIEGCFPSPATFNVLINGLCKK---GDFTRVTKLVDNMFLKGCVPNEVTYNT 291

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           LI GLC KG  +KA  L  ++V S    PN  TY  +I+G  K+ +      +L  M+E+
Sbjct: 292 LIHGLCLKGKLDKALSLLDRMVSSKCV-PNEVTYGTIINGLVKQGRALDGARVLVLMEER 350

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G + N   Y+ L+ G  K G  E A  L      +GC  N   Y+A++DGLC+  +  EA
Sbjct: 351 GYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEA 410

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            ++L +   +    +  T++ L+    +   + +A+ ++  M K     +   Y+ LI  
Sbjct: 411 MKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHG 470

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--NQIGCA 539
            C+  K+ E+   + + +  G  P    Y+SMI G    G++  A+K +  M   +    
Sbjct: 471 LCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQ 530

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           PD ITY  L + LCKQS +  A     SM+ +G  P  VT
Sbjct: 531 PDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 6/378 (1%)

Query: 279 QAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNVHTY 335
           +A EL   M  + + KP V +   +++ + + G+ ++A   +  +V  +  N  PNV ++
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I   CK   ++ A  L   M  +  +P+  TY +L+ G CKV   + A  L+D M  
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQI 244

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           EGC P+   +N +I+GLCKKG      +L+   F +    +++TY  L+     + +  +
Sbjct: 245 EGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 304

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L  RMV +   P+   Y T+I    +Q +  +  +        G    +  Y+ ++ 
Sbjct: 305 ALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVS 364

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  ++G    A++ F+     GC  + + Y AL+ GLC+  K DEA +    M  KG +P
Sbjct: 365 GLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAP 424

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFF 632
              T  +L   + + G+S  A+ + + + K          + LI  LC + +V  A + +
Sbjct: 425 NAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVW 484

Query: 633 HKLLGKDQNVDRVSLAAL 650
            K+L      D V+ +++
Sbjct: 485 AKMLATGCRPDVVAYSSM 502



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 203/485 (41%), Gaps = 72/485 (14%)

Query: 138 VCATSLISNG-NFERAHEVMQCMVSSFA---------EIGRLKEGFSMVIEMTNNGLPLI 187
           +C   L+ N     R   V +C+  ++          ++ R+ E  S++ EM   G    
Sbjct: 191 MCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPS 250

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            +T N ++   C+ G      ++ D M  +G   +  +Y  ++   C  G++ +A   L 
Sbjct: 251 PATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLD 310

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+    + +  T   +I     +G      +   L+EE   +G+  N Y ++VL+ GL 
Sbjct: 311 RMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEE---RGYIVNEYVYSVLVSGLF 367

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K+G +E+A RLF K       K N   Y+A++ G C++ K + A  +L  M ++G  PN 
Sbjct: 368 KEGKSEEAMRLF-KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNA 426

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T++SL+ G  +VGN  +A ++   M K  C  N   Y+ +I GLCK G+V E       
Sbjct: 427 FTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVME------- 479

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                                       A+ ++ +M+  G  PD+ AY+++I   C    
Sbjct: 480 ----------------------------AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGS 511

Query: 488 MKESEKFFQE--AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT- 544
           ++E+ K + E   +     P   TY  +     +  +IS AV     M   GC PD +T 
Sbjct: 512 VEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTC 571

Query: 545 --------------------YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
                                  L+  L K+ +   A +  E M+ K +SP   T   + 
Sbjct: 572 NIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVV 631

Query: 585 YEYCK 589
           +E C+
Sbjct: 632 HELCQ 636


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 201/452 (44%), Gaps = 40/452 (8%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T + N ++     LG  +  +  F +M   G      +Y +M+   C+ G +  A     
Sbjct: 98  TRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFE 157

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M  RG I D  T   +I  +   G  G +       EEM     +P+V T+  LI+  C
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGY---GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFC 214

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G   K    F ++ +S   KPNV +Y+ ++  +CKE+ M +A      M+  GL+PN 
Sbjct: 215 KFGKLPKGLEFFREMKQS-GLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNE 273

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           +TYTSL+  +CK+GN   A+ L D M + G   N+  Y A+IDGLC   R++EA EL  K
Sbjct: 274 HTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGK 333

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                +  +  +YT L+   +K     +AL L   M   G+ PD+  Y T I + C  +K
Sbjct: 334 MVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEK 393

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN------------------------- 522
           ++ ++    E    G+      YT+++  Y +  N                         
Sbjct: 394 IEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCV 453

Query: 523 ----------ISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
                     +S A+ YF R+ N  G   +   Y A+I GLCK+ +++ A   +E M  K
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQK 513

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           G+ P      +L     KQG+   A+ + + +
Sbjct: 514 GLVPDRTAYTSLIDGKLKQGNVVQALALRDKM 545



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 200/399 (50%), Gaps = 10/399 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + ++GRL +      EM +        T N ++   C+ G +    E F EM   G
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  +V A+C+   + +A ++   M   G + +  T T L+ A+C     G++ 
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKI---GNLS 290

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF L +EM + G + NV T+T LIDGLC     ++A  LF K+V +    PN+ +YTA+
Sbjct: 291 DAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTA-GVIPNLASYTAL 349

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+ K + M+RA  LL+ MK +G+ P+   Y + I+  C +   E A  +M+ M ++G 
Sbjct: 350 IHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI 409

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N + Y  ++D   K     E   LL++  + +++   +T+ +L+    K     +A+ 
Sbjct: 410 KANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAID 469

Query: 459 LFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            F R+    GL  +   YT +I   C++ +++ +   F++    GL P +  YTS+I G 
Sbjct: 470 YFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGK 529

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           L+ GN+  A+    +M +IG     +  GA    LC+ +
Sbjct: 530 LKQGNVVQALALRDKMAEIG-----VESGARFGDLCQNT 563



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 191/426 (44%), Gaps = 43/426 (10%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           L+  F   G    +K+ F+   +M+  G KP V+T+ ++ID +CK+G  E A  LF ++ 
Sbjct: 104 LLHKFARLGKTDGMKRFFK---DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM- 159

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +     P+  TY +MI GY K  +++      E MK     P+  TY +LI   CK G  
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKL 219

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            +  +    M + G  PN+ +Y+ ++D  CK+  +Q+A +      +  L  ++ TYT L
Sbjct: 220 PKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSL 279

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  + K      A  L   M + G+  ++  YT LI   C  +++KE+E+ F + +TAG+
Sbjct: 280 VDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   +YT++I G+++  N+  A++    M   G  PD + YG  I  LC   K++ A  
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGD-------------------SATAMIILESLD 604
               M  KGI        TL   Y K  +                   + T  ++++ L 
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459

Query: 605 K-KLWIRTVN-------------------TLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
           K KL  + ++                    +I  LC E +V  A   F ++  K    DR
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519

Query: 645 VSLAAL 650
            +  +L
Sbjct: 520 TAYTSL 525



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 196/437 (44%), Gaps = 46/437 (10%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            ++A +   +M R    P   +   L+    + G T+   R F  ++ + + KP V TY 
Sbjct: 79  FEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGS-KPTVFTYN 137

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            MI   CKE  +  A  L E MK +GL+P+T TY S+I G+ KVG  +      + M   
Sbjct: 138 IMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
            C P++  YN +I+  CK G++ +  E  ++  Q  L+ + ++Y+ L+    K+   +QA
Sbjct: 198 SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCR-------------------------------- 484
           L  +  M + GL P+ H YT+L+ A+C+                                
Sbjct: 258 LKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDG 317

Query: 485 ---QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
               +++KE+E+ F + +TAG+ P   +YT++I G+++  N+  A++    M   G  PD
Sbjct: 318 LCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPD 377

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            + YG  I  LC   K++ A      M  KGI        TL   Y K  + +  + +LE
Sbjct: 378 LLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLE 437

Query: 602 SLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL---LGKDQNVDRVSLAALKNACY 655
            + +     T  T   LI  LC  K V  A  +F ++    G   N   +  A +   C 
Sbjct: 438 EMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA-AIYTAMIDGLCK 496

Query: 656 ESNKYA---LFSDLSQR 669
           E    A   LF  ++Q+
Sbjct: 497 EDQVEAATTLFEQMAQK 513



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 164/366 (44%), Gaps = 38/366 (10%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    + A+ S   +E+    A     +MK   + P T +   L++   ++G  +     
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY--------- 440
              M   G  P ++ YN +ID +CK+G ++ A  L ++   R L  D +TY         
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 441 ------TILLSEHLKQ--------------------AETKQALGLFCRMVKAGLNPDIHA 474
                 T+   E +K                      +  + L  F  M ++GL P++ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+TL+ AFC++  M+++ KF+ +    GL P + TYTS++  Y + GN+S A +    M+
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
           Q+G   + +TY ALI GLC   ++ EA + +  M+  G+ P   +   L + + K  +  
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 595 TAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALK 651
            A+ +L+ +     K  +    T I  LC  +++  A +  +++  K    +      L 
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 652 NACYES 657
           +A ++S
Sbjct: 421 DAYFKS 426


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 216/459 (47%), Gaps = 36/459 (7%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-- 269
           ++M   G+  +  +Y +++  +CR  +++ A   L  M+  G      TL+ L+  +C  
Sbjct: 34  EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93

Query: 270 --------------DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTH 299
                         + G+R                    +A  L++ MV++G +PN+ T+
Sbjct: 94  KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            V+++GLCK+G  + AF L  K+  +   + +V  +  +I   CK   ++ A  L + M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+ PN  TY+SLI   C  G +  A  L+  M ++   PN+  +NA+ID   K+G+  
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA +L     +R +  D  TY  L++         +A  +F  MV     PD+  Y TLI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
             FC+ K++++  + F+E    GL     TYT++I G   DG+  +A K F++M   G  
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
           PD +TY  L+ GLC   KL++A + ++ M    I        T+    CK G       +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 600 LESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             SL     K  + T NT+I  LCS++ +  A     K+
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 206/403 (51%), Gaps = 5/403 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +   F+++ +M    +       N ++   C+   V+ A  +F EM  +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A + LS M+++    +  T   LI AF  +G      
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFV 272

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L ++M+++   P+++T+  LI+G C     +KA ++F  +V  D + P++ TY  +
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTL 331

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M  +GL+ +T TYT+LI G    G+ + A  +   M  +G 
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLC  G++++A E+     + E++ D   YT ++    K  +      
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  Y T+I+  C ++ ++E+    ++    G  P   TY ++I  +L
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+ +++ +  + M       D  T G L++ +    +LD++
Sbjct: 512 RDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 553



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 204/448 (45%), Gaps = 4/448 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E +   +  +++ +    R+ +  ++V +M   G    T T   ++           A 
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + D M  RG   +  +Y ++V   C+ G +  A   L+ M       D      +I + 
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C   +R  +  A  L +EM  KG +PNV T++ LI  LC  G    A +L   ++     
Sbjct: 196 CK--YR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KI 251

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN+ T+ A+I  + KE K   AE L + M ++ + P+  TY SLI G C     ++A  
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + M  + C P++  YN +I G CK  RV++  EL ++   R L  D +TYT L+    
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              +   A  +F +MV  G+ PDI  Y+ L+   C   K++++ + F     + +     
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT+MI G  + G +      F  ++  G  P+ +TY  +ISGLC +  L EA    + M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATA 596
              G  P   T  TL   + + GD A +
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAAS 519



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 218/496 (43%), Gaps = 40/496 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+ A++ +     S+  +M   G+     T N ++   C    +  A  +  +M   G
Sbjct: 16  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +   ++  YC   R+++A   +  M++ G   D  T T LI             
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKAS 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---------------- 322
           +A  L++ MV++G +PN+ T+ V+++GLCK+G  + AF L  K+                
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 323 ------------------VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                             + +   +PNV TY+++IS  C   + + A  LL  M E+ + 
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  T+ +LI    K G F  A  L D M K    P+I+ YN++I+G C   R+ +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +    ++   D  TY  L+    K    +    LF  M   GL  D   YTTLI     
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
                 ++K F++ ++ G+ P   TY+ ++ G   +G +  A++ F  M +     D   
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  +I G+CK  K+D+    + S+  KG+ P  VT  T+    C +     A  +L+ + 
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492

Query: 605 KKLWIR---TVNTLIR 617
           +   +    T NTLIR
Sbjct: 493 EDGPLPDSGTYNTLIR 508



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++  +  ++S   K +K +    L E+M+  G+  N  TY  LI   C+      A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M K G  P+I   +++++G C   R+ +A  L+ +  +   + D IT+T L+     
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +  +A+ L  RMV+ G  P++  Y  ++   C++  +  +     +   A +      
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           + ++I    +  ++  A+  F+ M   G  P+ +TY +LIS LC   +  +A Q    MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKR 624
            K I+P  VT   L   + K+G    A      +I  S+D  ++  T N+LI   C   R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF--TYNSLINGFCMHDR 305

Query: 625 VGMAALFFHKLLGKD 639
           +  A   F  ++ KD
Sbjct: 306 LDKAKQMFEFMVSKD 320



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 9/285 (3%)

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K    P+I+ +N ++  + K  +      L +K  +  +  +  TY IL++   ++++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              AL L  +M+K G  P I   ++L+  +C  K++ ++     + +  G  P   T+T+
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G       S AV    RM Q GC P+ +TYG +++GLCK+  +D A      M    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMA 628
           I    V   T+    CK      A+ + + ++ K  IR    T ++LI  LCS  R   A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDA 239

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
           +     ++ K  N + V+  AL +A  +  K+     L  D+ +R
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 197/401 (49%), Gaps = 20/401 (4%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  +L+  FC       +  A   L +M++ G +P++ T   L++G C+      A  +F
Sbjct: 118 TCNILLNCFCRCS---QLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
            ++V    Y+PNV  Y  +I G CK ++++ A  LL RM+  G+ P+  TY SLI G C 
Sbjct: 175 DRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCN 233

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G ++ A  ++  M K    P+++ +NA+ID   K+GR+ EA EL ++  +R L  D +T
Sbjct: 234 SGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVT 293

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y++L+      +   +A  +F  MV  G  PD+  Y+ LI  +C+ KK++   K F E  
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G+     TYT +I GY R G ++ A + F+ M   G  P+ ITY  L+ GLC   K++
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII-----LESLDKKLWIRTVNT 614
           +A      M   G+    VT   +    CK G+ A A  +     L+ L   +W  T   
Sbjct: 414 KALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIW--TYTA 471

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
           ++  L  +   G A   F K+  K+  +       L N CY
Sbjct: 472 MMLGLYKKGLRGEADALFRKM--KEDGI-------LPNECY 503



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 179/349 (51%), Gaps = 4/349 (1%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N+ T  +L++  C+      A     K+++   ++P++ T+ ++++G+
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKL-GHEPDIVTFGSLLNGF 161

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C+ +++  A  + +RM E G  PN   Y ++I G CK    + A DL++ M  +G  P+ 
Sbjct: 162 CRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDA 221

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YN++I GLC  GR  +A  ++    +RE+  D  T+  L+   +K+    +A  L+  
Sbjct: 222 VTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEE 281

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M++  L+PDI  Y+ LI   C   ++ E+E+ F   ++ G FP   TY+ +I GY +   
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +   +K F  M+Q G   + +TY  LI G C+  KL+ A + ++ M+  G+ P  +T   
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401

Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           L +  C  G    A++IL  + K      I T N +IR +C    V  A
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 186/366 (50%), Gaps = 4/366 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           ++++M   G+  +  +  +++  +CR  +++ A  +L  M+  G   D  T   L+  FC
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFC 162

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            +G R  I  A  + + MV  G++PNV  +  +IDGLCK    + A  L L  +  D  +
Sbjct: 163 -RGDR--IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL-LNRMEVDGIR 218

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+  TY ++ISG C   + + A  ++  M ++ + P+  T+ +LI    K G    A +L
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +    P+I  Y+ +I GLC   R+ EA ++      +    D +TY+IL++ + K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCK 338

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + +  + LFC M + G+  +   YT LI  +CR  K+  +E+ F+  +  G+ P   T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIIT 398

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  ++ G   +G I  A+     M + G   D +TY  +I G+CK  ++ +A   Y S+ 
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458

Query: 570 GKGISP 575
            KG++P
Sbjct: 459 LKGLTP 464



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 156/323 (48%), Gaps = 4/323 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E    +   ++    +  ++     ++  M  +G+     T N ++   C  G  + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +   M  R +  D  ++  ++ A  + GR++EA+     M+ R    D  T +LLI   
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C       + +A ++   MV KG  P+V T+++LI+G CK    E   +LF ++ +    
Sbjct: 302 C---MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           + N  TYT +I GYC+  K+N AE + + M   G+ PN  TY  L++G C  G  E+A  
Sbjct: 359 R-NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           ++  M K G   +I  YN II G+CK G V +A++L      + L  D  TYT ++    
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY 477

Query: 449 KQAETKQALGLFCRMVKAGLNPD 471
           K+    +A  LF +M + G+ P+
Sbjct: 478 KKGLRGEADALFRKMKEDGILPN 500



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 4/323 (1%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + +  LF  +V+     P++  ++ ++S   K +K +    L E+M+  G+  N  T   
Sbjct: 63  DDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+   C+      A   +  M K G  P+I  + ++++G C+  R+ +A  +  +  +  
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + + + Y  ++    K  +   AL L  RM   G+ PD   Y +LI+  C   +  ++ 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +         ++P   T+ ++I   +++G IS A + ++ M +    PD +TY  LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
           C  S+LDEA Q +  M+ KG  P  VT   L   YCK       M +   + ++  +R  
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 611 -TVNTLIRKLCSEKRVGMAALFF 632
            T   LI+  C   ++ +A   F
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIF 384



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
           F R   +    Y  +L   ++  +   +L LF  MV+    P I  ++ L++A  + KK 
Sbjct: 38  FSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
                 +++    G+     T   ++  + R   +S A+ +  +M ++G  PD +T+G+L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           ++G C+  ++ +A   ++ M+  G  P  V   T+    CK      A+ +L  ++    
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD-G 216

Query: 609 IR----TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           IR    T N+LI  LC+  R   A      +  ++   D  +  AL +AC +  +
Sbjct: 217 IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 211/471 (44%), Gaps = 53/471 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S  A+I    + FS+  +M  +GL     TLN ++   C +  +      F  +  RG
Sbjct: 75  LLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C   R++EA R    M   G   D  T   LI   C  G   +I 
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG---NIN 191

Query: 279 QAFELLEEMVRK------GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---------V 323
            A +L +EM+          KPNV T+ +++DGLCK G  ++A +LF ++         +
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEM 251

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
                +P++ T+  +I   CKE K+  A+ LL  M E G++P+  TY SLI G C VG+ 
Sbjct: 252 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 311

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL------------------ 425
             A +L   M  +GC P++ +YN +I+G  K  +V+EA +L                   
Sbjct: 312 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 371

Query: 426 -------------KKAFQ----RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
                        KK F       +  +  TY I L    K     +A+ LF  +  +  
Sbjct: 372 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 431

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
             +I     LI   C+  K++ + + F++    G  P   TYT MI G+ R+G +  A  
Sbjct: 432 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 491

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             Q+M   GC PD ITY  L+ G  + +KL+E  Q    M  K +SP  +T
Sbjct: 492 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 216/469 (46%), Gaps = 21/469 (4%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           ++++M   G+ +D  +  +++   C + R+ E     + +L RG   +  T   LI   C
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD--- 326
                  I +A  L   M + G  P+V T+  LI GLC  G    A +L  +++      
Sbjct: 151 ---MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRY 207

Query: 327 --NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN----------TYTSLI 374
             N KPNV TY  ++ G CK  + + A+ L E MK QG++PN            T+  LI
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLI 267

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              CK G    A  L+ +M + G  P++  YN++I+G C  G +  A EL      +  +
Sbjct: 268 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 327

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D I+Y +L++ + K  + ++A+ L+  M+  G  P++  Y +L+       K+ +++K 
Sbjct: 328 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 387

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F      G+     TY   + G  ++  +  A+K F  +       +      LI GLCK
Sbjct: 388 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 447

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
             KL+ A + +E +  +G  P  VT   + + +C++G    A ++++ ++       I T
Sbjct: 448 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 507

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
            NTL+R      ++       H++  KD + D ++ + + +   +  KY
Sbjct: 508 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKY 556



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 209/509 (41%), Gaps = 58/509 (11%)

Query: 118 SFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVI 177
           SF +   G AK +H+ +++ +     +S  + +R    +  +++    + RL+EGF+   
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRC--TLNILLNCLCNVNRLREGFAAFA 128

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM----CA----------RGVCADA 223
            +   G      T N ++   C    +  A  +F  M    C           +G+C   
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG 188

Query: 224 S---------------------------SYKLMVVAYCRMGRVTEADRWL---------- 246
           +                           +Y ++V   C++GR  EA +            
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           + MLD+G   D  T  +LI   C +G    + +A +LL  M+  G  P++ T+  LI+G 
Sbjct: 249 NEMLDQGLQPDMVTFNVLIDTLCKEG---KVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C  G    A  LF+ +  S   +P+V +Y  +I+GY K  K+  A  L   M   G  PN
Sbjct: 306 CMVGDLNSARELFVSM-PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 364

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY SL+ G    G  + A  L  +M   G   N Y Y   +DGLCK   + EA +L  
Sbjct: 365 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT 424

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +      + +      L+    K  + + A  LF ++   G  P++  YT +I  FCR+ 
Sbjct: 425 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 484

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           ++ ++    Q+    G  P   TY +++ G+     +   V+   RM Q   +PD IT  
Sbjct: 485 QVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCS 544

Query: 547 ALISGLCKQSKLDEACQFYESM-IGKGIS 574
            ++  L K  K  E         I KG+ 
Sbjct: 545 IVVDMLSKDEKYQECLHLLPRFPIQKGVD 573



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 136/311 (43%), Gaps = 21/311 (6%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDL--MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           +P+ N   +    HCK GN    + L    LM +   TP++ ++N ++ GL K     + 
Sbjct: 29  IPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
           + L  +     L +D+ T  ILL+        ++    F  +++ G +P+I  Y TLI  
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM------NQ 535
            C + ++ E+ + F      G  P   TY ++I G    GNI+ A+K  Q M       +
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYE----------SMIGKGISPCEVTRVTLAY 585
           I C P+ ITY  ++ GLCK  + DEA Q +E           M+ +G+ P  VT   L  
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLID 268

Query: 586 EYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
             CK+G    A  +L  + +   +    T N+LI   C    +  A   F  +  K    
Sbjct: 269 TLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEP 328

Query: 643 DRVSLAALKNA 653
           D +S   L N 
Sbjct: 329 DVISYNVLING 339



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 167/428 (39%), Gaps = 92/428 (21%)

Query: 307 CKKGWTEKAFRL-FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           CK G       L F  L+      P++ ++  ++SG  K +  ++   L  +M+  GL  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +  T   L+   C V      +     + + G +PNI  YN +I GLC + R+ EA  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 426 KKA-----------------------------------------FQRELQADKITYTILL 444
            +                                          ++   + + ITY I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 445 SEHLKQAETKQALGLF----------CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
               K     +A  LF            M+  GL PD+  +  LI   C++ K+ E++K 
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
               I +G+ P   TY S+I G+   G+++SA + F  M   GC PD I+Y  LI+G  K
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTL----------------------------AYE 586
             K++EA + Y  M+  G  P  +T  +L                            +Y 
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402

Query: 587 Y-------CKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           Y       CK      AM +   L+S + KL I  +N LI  LC   ++  A   F KL 
Sbjct: 403 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLS 462

Query: 637 --GKDQNV 642
             G + NV
Sbjct: 463 NEGHEPNV 470


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 207/441 (46%), Gaps = 27/441 (6%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-KGFRGSIKQA 280
           +A +Y  ++   C  G+V +A   L  ML RG   D  T  +L+ A C  +G+R    QA
Sbjct: 6   NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYR----QA 61

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            EL++ M  +G  PN  T+ VL+DG+C +G  + A  L L+ + S   KP+   Y  ++ 
Sbjct: 62  MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL-LRNLPSHGCKPSTVNYNTVLK 120

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G C  E+   A+ L+  M  +   PN  T+  +IY  C+ G  ++A  L++ M K GCT 
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           NI  YNAII+GLC++  V  A  LL K      + D +TY  LL      A    A  L 
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M + G  PD   + TLI   C++  M ++ + F++    G  P   TY+++I G  + 
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  A++ F  M   G  PD I Y  L   L     ++EA Q    +   GISP  V  
Sbjct: 301 TKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359

Query: 581 VTLAYEYCKQG-------------------DSATAMIILESLDKKLWIRTVNTLIRKLCS 621
             +    C+ G                   D  T +I++E L  + ++     L+ KLCS
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 419

Query: 622 EKRVGMAALFFHKLLGKDQNV 642
            + V + +L   + L  DQN+
Sbjct: 420 -RDVLVNSLIKSEALLLDQNI 439



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 150/317 (47%), Gaps = 34/317 (10%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRL---------------------------------- 318
           +PN YT+  LI  LC++G    A  +                                  
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            + L+R++   PN  TY  ++ G C E  ++ A  LL  +   G  P+T  Y +++ G C
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               +  A +L+  M +E C PN   +N +I  LC+KG +Q+A +LL+K  +    A+ +
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  +++   +Q     A+GL  +M   G  PDI  Y TL+   C   +  ++E+     
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   T+ ++I    + G +  A++ F++M   GC P++ITY  +ISGL K +KL
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 559 DEACQFYESMIGKGISP 575
           D+A + +  M  KG +P
Sbjct: 304 DQALELFNEMGHKGFNP 320



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 170/345 (49%), Gaps = 7/345 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G V+ A E+   + + G      +Y  ++   C   R  +AD  ++ M
Sbjct: 79  TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L      + AT  ++I + C KG    ++QA +LLE+M + G   N+ T+  +I+GLC++
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGL---LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQ 195

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              + A  L  K+ +S   KP++ TY  ++ G C   +   AE L++ M + G LP+  T
Sbjct: 196 RNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVT 254

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI   C+ G    A ++   M  +GCTPN   Y+ II GL K  ++ +A EL  +  
Sbjct: 255 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 314

Query: 430 QRELQADKITYTILLSEHLKQAET-KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +    DKI    LL+E L   +T ++A+    ++  +G++P    Y  ++   CR  K 
Sbjct: 315 HKGFNPDKIYQ--LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKT 372

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           + +       +++G  P   TY  +I G   +G ++ A +   ++
Sbjct: 373 EFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 152/320 (47%), Gaps = 3/320 (0%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           +PN +TY  +I   C+  ++  A  +L+ M  +G  P+  TY  L+   CK   + +A +
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+DLM  EGCTPN   YN ++DG+C +G V +A ELL+       +   + Y  +L    
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
                  A  L   M++    P+   +  +I + CR+  ++++ +  ++    G      
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY ++I G     N+  A+    +M   GC PD +TY  L+ GLC  ++  +A +  ++M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRV 625
              G  P  VT  TL    C++G    A+ + + +  K       T +T+I  L    ++
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 626 GMAALFFHKLLGKDQNVDRV 645
             A   F+++  K  N D++
Sbjct: 304 DQALELFNEMGHKGFNPDKI 323



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 7/292 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    G L++   ++ +M+ +G      T N ++   CE   V+ A  +  +M + G
Sbjct: 153 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++   C   R  +A+  +  M   G + DN T   LI   C KG    + 
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL---MV 269

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+ ++M  KG  PN  T++ +I GL K    ++A  LF ++     + P+   Y  +
Sbjct: 270 DAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK-GFNPD-KIYQLL 327

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
                 ++ +  A   + ++++ G+ P+T  Y +++ G C+ G  E A D+M  M   GC
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI--TYTILLSEHL 448
            P+   Y  +I+GL  +G + EA ELL K   R++  + +  +  +LL +++
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALLLDQNI 439



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 3/206 (1%)

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +Q +  TY  L+    ++ + + AL +   M+  G  PD+  Y  L+ A C+ +  +++ 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +        G  P   TY  ++ G   +G++  A++  + +   GC P  + Y  ++ GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWI 609
           C   +  +A +    M+ +   P E T   + Y  C++G    A+ +LE + K      I
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
            T N +I  LC ++ V  A     K+
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKM 208


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 19/444 (4%)

Query: 144 ISNGNFERAHEVMQCMVSS-----------FAEIGRLKEGFSMVIE----MTNNGLPLIT 188
           + NG FE    V   MV             F    + +    + +E    M ++G+ +  
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
            +L  VV   C  G VE ++++  E   +G+  +A +Y  ++ AY +    +  +  L  
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M   G + +  T TLL+      G    +  A +L +EM  +G + +V+ +T LI   C+
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNG---KMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           KG  ++AF LF +L       P+ +TY A+I G CK  +M  AE+L+  M+ +G+     
Sbjct: 342 KGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
            + +LI G+C+ G  + A  + D+M ++G   +++  N I     +  R  EA + L + 
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +  ++   ++YT L+  + K+   ++A  LF  M   G+ P+   Y  +I A+C+Q K+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           KE+ K        G+ P   TYTS+I G     N+  A++ F  M   G   +++TY  +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580

Query: 549 ISGLCKQSKLDEACQFYESMIGKG 572
           ISGL K  K DEA   Y+ M  KG
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKG 604



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 203/440 (46%), Gaps = 39/440 (8%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G+ E    VFD M  +G+  D  S  + +VA  +  R+         M+D G  +   +L
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI------------------ 303
           T+++   C    RG ++++ +L++E   KG KP  YT+  +I                  
Sbjct: 228 TIVVEGLCR---RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284

Query: 304 ---DGLC--------------KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
              DG+               K G    A +LF ++ R    + +VH YT++IS  C++ 
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM-RERGIESDVHVYTSLISWNCRKG 343

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M RA +L + + E+GL P++ TY +LI G CKVG    A  LM+ M  +G       +N
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +IDG C+KG V EA  +     Q+  QAD  T   + S   +     +A     RM++ 
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+     +YT LI  +C++  ++E+++ F E  + G+ P   TY  MI  Y + G I  A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            K    M   G  PD+ TY +LI G C    +DEA + +  M  KG+    VT   +   
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583

Query: 587 YCKQGDSATAMIILESLDKK 606
             K G S  A  + + + +K
Sbjct: 584 LSKAGKSDEAFGLYDEMKRK 603


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 225/500 (45%), Gaps = 60/500 (12%)

Query: 124 IGFAKFRHFMRL--------YIVCATSLISNGNFERAHEVMQCM---------------V 160
           +  A +RH  RL        Y +   +L   GNFE A +V + M               +
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGV 219
                  R   G+  +  +     P+ T     V+ G   E+ L E AE+VF +M   G+
Sbjct: 270 EGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKE-AEDVFIDMVNEGI 328

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++ AYC+ G +      L A+     ++ N   T L+  F  K FR S   
Sbjct: 329 APDGYIYGALIHAYCKAGNL------LQAVALHNDMVSNGIKTNLVDQF--KEFRDSGIF 380

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
             E+L              + +++D LCK G  E+A  L L  ++      +V  YT +I
Sbjct: 381 LDEVL--------------YNIVVDALCKLGKVEEAVEL-LNEMKGRRMSLDVVHYTTLI 425

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +GYC + K+  A+ + E MKE+G+ P+  TY  L+ G  + G  + A +L+D +G +G  
Sbjct: 426 AGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLK 485

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   +N II+GLC  G+V+EA   L     + L+     Y+ ++  + K   T++A  L
Sbjct: 486 PNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYEL 541

Query: 460 FCRMVKAGL--------NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           F R+ K G+         P+   Y  LI AFCR   MK ++  F   +  G+ P   TYT
Sbjct: 542 FSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYT 601

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MI GY R   +  A   F  M + G  PD ITY  ++ G  K + L +A   Y+ MI +
Sbjct: 602 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIAR 661

Query: 572 GISPCEVTRVTLAYEYCKQG 591
           G+ P  VT   L    C  G
Sbjct: 662 GLQPDIVTYTALLPGKCNFG 681



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 175/454 (38%), Gaps = 127/454 (27%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW--------------------------- 292
            L +L+ A+   G      +A + L +  R+G+                           
Sbjct: 159 VLDMLVKAYVRVGM---FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIY 215

Query: 293 --------KPNVYTHTVLIDGLCKKGWTEKAFRLF------------------------- 319
                    PN YT+ + I  LC+KG  E+A  +F                         
Sbjct: 216 RHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSH 275

Query: 320 ---------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
                    L+ +R+ N+  +   YTA+I G+C E K+  AE +   M  +G+ P+   Y
Sbjct: 276 KRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIY 335

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA----------------YNAIIDGLCK 414
            +LI+ +CK GN  +A  L + M   G   N+                  YN ++D LCK
Sbjct: 336 GALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCK 395

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G+V+EA ELL +   R +  D + YT L++ +  Q +   A  +F  M + G+ PDI  
Sbjct: 396 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 455

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK--------------------------- 507
           Y  L+  F R    KE+ +      T GL P                             
Sbjct: 456 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 515

Query: 508 ----ETYTSMICGYLRDGNISSAVKYFQRMNQIG--------CAPDNITYGALISGLCKQ 555
               E Y++M+ GY +      A + F R+++ G          P+ I YG LI   C+ 
Sbjct: 516 DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRD 575

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
             +  A   ++ ++ +GI+P  +T   +   YC+
Sbjct: 576 GDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 609



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 169/391 (43%), Gaps = 26/391 (6%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L+    + G  ++A     +  R   + P++ +   +++   +  K++ A  +   +K 
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRR-GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            GL PN  TY   I   C+ GNFE A D+   M + G  PN    +  I+GLC   R   
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
            YE L+         D   YT ++     + + K+A  +F  MV  G+ PD + Y  LI 
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 481 AFCRQKKMKESEKF----------------FQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           A+C+   + ++                   F+E   +G+F  +  Y  ++    + G + 
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            AV+    M     + D + Y  LI+G C Q KL +A   +E M  +GI P  VT   L 
Sbjct: 401 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460

Query: 585 YEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             + + G    A+ +L+ +     K    T N +I  LC   +V  A  F + L  +D+ 
Sbjct: 461 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL--EDKC 518

Query: 642 VDRVSLAALKNAC---YESNKYALFSDLSQR 669
           ++  S A +   C   +    Y LFS LS++
Sbjct: 519 LENYS-AMVDGYCKANFTRKAYELFSRLSKQ 548



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 34/354 (9%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F   ++   ++ NV TY A+I   C+          LER K Q LL         + G  
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWR--------LER-KLQSLLSEIVGSKESVLGFD 133

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               F+   +    +  E  +  I   + ++    + G   EA + L +  +R      +
Sbjct: 134 ITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIM 193

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +   L++  ++  +   A+ ++  + + GLNP+ + Y   I A CR+   +E+   F+E 
Sbjct: 194 SCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM 253

Query: 499 ITAGLFP---TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
             AG+ P   T  TY   +C + R      A++  +  N      D   Y A+I G C +
Sbjct: 254 EEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANW---PIDTFAYTAVIRGFCSE 310

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL------------ 603
            KL EA   +  M+ +GI+P       L + YCK G+   A+ +   +            
Sbjct: 311 MKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQ 370

Query: 604 -----DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                D  +++  V  N ++  LC   +V  A    +++ G+  ++D V    L
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTL 424



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 22/163 (13%)

Query: 159 MVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++ +F   G +K     F M++E    G+     T   ++   C +  +  A ++F++M 
Sbjct: 568 LIGAFCRDGDMKRAQLVFDMLVE---RGITPDVITYTMMINGYCRVNCLREARDIFNDMK 624

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG+  D  +Y +++  + +   + +A      M+ RG   D  T T L+   C+ G R 
Sbjct: 625 ERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRH 684

Query: 276 SIKQAFE-------------LLEEM---VRKGWKPNVYTHTVL 302
              Q  E              LEEM    R  WKP ++  T L
Sbjct: 685 FDNQWLEEPKLFILAQPRGVRLEEMGALWRDAWKPFIFRLTPL 727


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 190/414 (45%), Gaps = 8/414 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL  +  T N ++   C  G V  A  + ++M  +G+  D  +Y  +V   C+MG 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
              A   LS M +     D    + +I   C  G     +  F    EM+ KG  PNV+T
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS---EMLEKGIAPNVFT 117

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  +IDG C  G    A RL   ++  +   P+V T+ A+IS   KE K+  AE L + M
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEM 176

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             + + P+T TY S+IYG CK   F+ A  + DLM     +P++  +N IID  C+  RV
Sbjct: 177 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRV 232

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            E  +LL++  +R L A+  TY  L+    +      A  LF  M+  G+ PD      L
Sbjct: 233 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +  FC  +K++E+ + F+    + +      Y  +I G  +   +  A   F  +   G 
Sbjct: 293 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 352

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
            PD  TY  +ISG C +S + +A   +  M   G  P   T  TL     K G+
Sbjct: 353 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 406



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 9/403 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   ++G  K   +++ +M    +       + ++   C+ G    A+ +F EM  +G
Sbjct: 51  IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  M+  +C  GR ++A R L  M++R    D  T   LI+A   +G    + 
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLF 167

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L +EM+ +   P+  T+  +I G CK    + A  +F  L+ S    P+V T+  +
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTI 222

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC+ ++++    LL  +  +GL+ NT TY +LI+G C+V N   A DL   M   G 
Sbjct: 223 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 282

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N ++ G C+  +++EA EL +     ++  D + Y I++    K ++  +A  
Sbjct: 283 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 342

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ PD+  Y  +I+ FC +  + ++   F +    G  P   TY ++I G L
Sbjct: 343 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 402

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           + G I  +++    M   G + D  T   +++ L    +LD++
Sbjct: 403 KAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKS 444



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 185/435 (42%), Gaps = 40/435 (9%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++  ++   C  GRV EA   ++ M+ +G  +D  T   ++   C     G  K A  LL
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK---MGDTKSALNLL 68

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +M     KP+V  ++ +ID LCK G    A  LF +++      PNV TY  MI G+C 
Sbjct: 69  SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCS 127

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             + + A+ LL  M E+ + P+  T+ +LI    K G    A  L D M      P+   
Sbjct: 128 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 187

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN++I G CK  R  +A    K  F      D +T+  ++  + +     + + L   + 
Sbjct: 188 YNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + GL  +   Y TLI  FC    +  ++  FQE I+ G+ P   T   ++ G+  +  + 
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 303

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A++ F+ +       D + Y  +I G+CK SK+DEA   + S+   G+ P         
Sbjct: 304 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP--------- 354

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDR 644
                                   ++T N +I   C +  +  A + FHK+       D 
Sbjct: 355 -----------------------DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 391

Query: 645 VSLAALKNACYESNK 659
            +   L   C ++ +
Sbjct: 392 STYNTLIRGCLKAGE 406



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 10/325 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  F   GR  +   ++ +M    +     T N ++  + + G +  AE++ DEM  
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           R +  D  +Y  M+  +C+  R  +A      M D  A  D  T   +I  +C +  R  
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYC-RAKR-- 231

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +  +LL E+ R+G   N  T+  LI G C+      A  LF +++ S    P+  T  
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCN 290

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++ G+C+ EK+  A  L E ++   +  +T  Y  +I+G CK    + A+DL   +   
Sbjct: 291 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 350

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++  YN +I G C K  + +A  L  K      + D  TY  L+   LK  E  ++
Sbjct: 351 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 410

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAA 481
           + L   M   G + D  A+T  + A
Sbjct: 411 IELISEMRSNGFSGD--AFTIKMVA 433



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 9/239 (3%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G TP +  +N +I+GLC +GRV EA  L+ K   + L  D +TY  +++   K  +TK A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L  +M +  + PD+  Y+ +I   C+     +++  F E +  G+ P   TY  MI G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           +   G  S A +  + M +    PD +T+ ALIS   K+ KL EA +  + M+ + I P 
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 577 EVTRVTLAYEYCKQG--DSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRV--GMAAL 630
            VT  ++ Y +CK    D A  M  ++ S D    + T NT+I   C  KRV  GM  L
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLL 239



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 7/282 (2%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E GL P   T+ +LI G C  G    A  L++ M  +G   ++  Y  I++G+CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            + A  LL K  +  ++ D + Y+ ++    K      A  LF  M++ G+ P++  Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           +I  FC   +  ++++  ++ I   + P   T+ ++I   +++G +  A K    M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD +TY ++I G CK ++ D+A   ++ M     SP  VT  T+   YC+       M
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 598 IILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLL 636
            +L  + ++  +    T NTLI   C    +  A   F +++
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 201/437 (45%), Gaps = 4/437 (0%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ S  E G L +   +   M + GL L +ST N ++   C+ G  + AE +  EM
Sbjct: 359 VYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEM 418

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            + G   +  S+  ++   C       A R++  ML R        LT LI+  C     
Sbjct: 419 LSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK---H 475

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A EL  + + KG+  +  T   L+ GLC+ G  E+ FR+  K +    +  +  +
Sbjct: 476 GKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRI-QKEILGRGFVMDRVS 534

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +ISG C  +K++ A M ++ M ++GL P+  TY+ LI G   +   E A        
Sbjct: 535 YNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCK 594

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P++Y Y+ +IDG CK  R +E  +L  +     LQ + + Y  L+  + +     
Sbjct: 595 RNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLS 654

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL L   M   G++P+   YT+LI       +++E++   +E    GL P    YT++I
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALI 714

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY + G +       + M+     P+ ITY  +I G  +   + EA +    M  KGI 
Sbjct: 715 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIV 774

Query: 575 PCEVTRVTLAYEYCKQG 591
           P  +T     Y Y KQG
Sbjct: 775 PDSITYKEFIYGYLKQG 791



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 204/448 (45%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R+ + + ++ EMT  G P      N ++    E G +  A E+ D M ++G
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   +S+Y  ++  YC+ G+   A+R L  ML  G  ++  + T +I   C      S  
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDS-- 445

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   + EM+ +   P     T LI GLCK G   KA  L+LK + +  +  +  T  A+
Sbjct: 446 -ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFL-NKGFLVDTKTSNAL 503

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+  K+     + + +  +G + +  +Y +LI G C     + A+  MD M K+G 
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL 563

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ Y Y+ +I GL    +V+EA +      +  +  D  TY++++    K   T++   
Sbjct: 564 KPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQK 623

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M+   L P+   Y  LI A+CR  ++  + +  ++    G+ P   TYTS+I G  
Sbjct: 624 LFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 683

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
               +  A    + M   G  P+   Y ALI G  K  ++ +       M  K + P ++
Sbjct: 684 IISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 743

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   +   Y + G+   A  +L  + +K
Sbjct: 744 TYTVMIGGYARDGNVTEASRLLHEMREK 771



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 186/370 (50%), Gaps = 14/370 (3%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N      ++  ++S   + G+  +   + ++  N G  + T T N ++   CE G +E  
Sbjct: 457 NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             +  E+  RG   D  SY  ++   C   ++ EA  ++  M+ +G   DN T ++LI  
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRG 576

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
             +      +++A +   +  R G  P+VYT++V+IDG CK   TE+  +LF +++ S+N
Sbjct: 577 LLN---MNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM-SNN 632

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            +PN   Y  +I  YC+  +++ A  L E MK +G+ PN+ TYTSLI G   +   E A 
Sbjct: 633 LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 692

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L++ M  EG  PN++ Y A+IDG  K G++ +   LL++   + +  +KITYT+++  +
Sbjct: 693 LLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 752

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +     +A  L   M + G+ PD   Y   I  + +Q  + ++ K   E          
Sbjct: 753 ARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE---------- 802

Query: 508 ETYTSMICGY 517
           E Y ++I G+
Sbjct: 803 ENYAAIIEGW 812



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 169/364 (46%), Gaps = 14/364 (3%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
           L  ++   C+ G    A E++ +   +G   D  +   ++   C  G++ E  R    +L
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
            RG ++D  +   LI+  C       + +AF  ++EMV+KG KP+ YT+++LI GL    
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNK---KLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMN 581

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             E+A + F    + +   P+V+TY+ MI G CK E+    + L + M    L PNT  Y
Sbjct: 582 KVEEAIQ-FWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVY 640

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI  +C+ G    A +L + M  +G +PN   Y ++I G+    RV+EA  LL++   
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L+ +   YT L+  + K  +  +   L   M    ++P+   YT +I  + R   + E
Sbjct: 701 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 760

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +   E    G+ P   TY   I GYL+ G +  A K            D   Y A+I 
Sbjct: 761 ASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK----------GSDEENYAAIIE 810

Query: 551 GLCK 554
           G  K
Sbjct: 811 GWNK 814



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 217/488 (44%), Gaps = 51/488 (10%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCA 216
           +++F + G+++E   +  +M   G+     T N V+     LG+    +E F   ++M  
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVID---GLGMSGRYDEAFMFKEKMVE 315

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG----AILDNATLTLLITAFCDKG 272
           RGV     +Y ++V    +  R+ +A   L  M ++G     I+ N  +  LI A     
Sbjct: 316 RGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEA----- 370

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD------ 326
             GS+ +A E+ + MV KG      T+  LI G CK G  + A RL  +++         
Sbjct: 371 --GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQG 428

Query: 327 ----------------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
                                       N  P     T +ISG CK  K ++A  L  + 
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G L +T T  +L++G C+ G  E  + +   +   G   +  +YN +I G C   ++
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKL 548

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA+  + +  ++ L+ D  TY+IL+   L   + ++A+  +    + G+ PD++ Y+ +
Sbjct: 549 DEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVM 608

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C+ ++ +E +K F E ++  L P    Y  +I  Y R G +S A++  + M   G 
Sbjct: 609 IDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGI 668

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           +P++ TY +LI G+   S+++EA    E M  +G+ P       L   Y K G       
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 728

Query: 599 ILESLDKK 606
           +L  +  K
Sbjct: 729 LLREMHSK 736



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 196/465 (42%), Gaps = 43/465 (9%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E F  +C +GV  D   +   + A+C+ G+V EA    S M + G + +  T   +I   
Sbjct: 239 EAFHVVC-KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGL 297

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G  G   +AF   E+MV +G +P + T+++L+ GL K      A+   LK +    +
Sbjct: 298 ---GMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAY-CVLKEMTEKGF 353

Query: 329 KPNV-----------------------------------HTYTAMISGYCKEEKMNRAEM 353
            PNV                                    TY  +I GYCK  + + AE 
Sbjct: 354 PPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAER 413

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL+ M   G   N  ++TS+I   C    F+ A   +  M     +P       +I GLC
Sbjct: 414 LLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 473

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G+  +A EL  K   +    D  T   LL    +  + ++   +   ++  G   D  
Sbjct: 474 KHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRV 533

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           +Y TLI+  C  KK+ E+  F  E +  GL P   TY+ +I G L    +  A++++   
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            + G  PD  TY  +I G CK  + +E  + ++ M+   + P  V    L   YC+ G  
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL 653

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + A+ + E +  K       T  +LI+ +    RV  A L   ++
Sbjct: 654 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEM 698



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 192/431 (44%), Gaps = 11/431 (2%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R  RV  AD   S  L     +      LLI  +C +  R     A ++   +  KG  P
Sbjct: 157 RDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFP 216

Query: 295 NVYTHTVLIDGLCKKGWTEK---AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  T  +L+  L +    +K   AF +  K V      P+V+ +T  I+ +CK  K+  A
Sbjct: 217 SKTTCNILLTSLVRATEFQKCCEAFHVVCKGV-----SPDVYLFTTAINAFCKGGKVEEA 271

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L  +M+E G++PN  TY ++I G    G ++ A+   + M + G  P +  Y+ ++ G
Sbjct: 272 IELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKG 331

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L K  R+ +AY +LK+  ++    + I Y  L+   ++     +A+ +   MV  GL+  
Sbjct: 332 LTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLT 391

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              Y TLI  +C+  +   +E+  +E ++ G    + ++TS+IC         SA+++  
Sbjct: 392 SSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVG 451

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M     +P       LISGLCK  K  +A + +   + KG      T   L +  C+ G
Sbjct: 452 EMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAG 511

Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
                  I + +  + ++    + NTLI   C  K++  A +F  +++ K    D  + +
Sbjct: 512 KLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYS 571

Query: 649 ALKNACYESNK 659
            L       NK
Sbjct: 572 ILIRGLLNMNK 582


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 229/495 (46%), Gaps = 28/495 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  ++S  A+ G L +    V  +    +P  T T N ++              +F+++
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A  V     ++ +++   C+ G + EA    S M + G + D  T   LI  +   G  
Sbjct: 184 PAPNV----FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY---GKC 236

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  +L+EEM R G K +V T+  LI+  CK G  E A+  F  + R +    NV T
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKR-EGVMANVVT 295

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           ++  +  +CKE  +  A  L  +M+ +G+  N  TYT LI G CK G  + A  L+D M 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   N+  Y  ++DGLCK+ +V EA ++L+   +  ++A+++ YT L+  H     ++
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +ALGL   M   GL  DI  Y  LI   C   K+ E++    +   +GL P    YT+M+
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G +  A+   Q++   G  P+N               L+EA Q +  M+ KG+S
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNN-------------GCLNEAVQLFNEMVHKGMS 522

Query: 575 PCEVTRVTLAYEYCKQGD-----SATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
             +V    L   Y KQG+     +  A +I   L   L+  T    I   C+   +  A 
Sbjct: 523 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYT--CFISGFCNLNMMPEAR 580

Query: 630 LFFHKLLGKDQNVDR 644
             F +++G     DR
Sbjct: 581 EVFSEMIGHGIAPDR 595



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 177/378 (46%), Gaps = 26/378 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L E   +V EM  +G      T N ++   C+ G +E A   F  M   G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V A+  ++   V A+C+ G V EA +  + M  RG  L+  T T LI   C  G    + 
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG---RLD 345

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+EMVR+G   NV T+TVL+DGLCK+    +A  + L+++     + N   YT +
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV-LRMMEKAGVRANELLYTTL 404

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+   +   +A  LL  MK +GL  + + Y +LI G C V   + A  L+  M + G 
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA----------------------D 436
            PN   Y  ++D   K G+V EA  +L+K      Q                       D
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLD 524

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           K+ YT LL  +LKQ     A  L  +M+ +GL  D+  YT  I+ FC    M E+ + F 
Sbjct: 525 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 584

Query: 497 EAITAGLFPTKETYTSMI 514
           E I  G+ P +  Y  +I
Sbjct: 585 EMIGHGIAPDRAVYNCLI 602



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 193/407 (47%), Gaps = 28/407 (6%)

Query: 167 GRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G L E  S+   M   G LP +  T N ++    + G ++  E++ +EM   G  AD  +
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVV-TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVT 260

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++  +C+ GR+  A  + +AM   G + +  T +  + AFC +G    +++A +L  
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL---VREAMKLFA 317

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M  +G   N +T+T LIDG CK G  + A  L  ++VR      NV TYT ++ G CKE
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ-GVPLNVVTYTVLVDGLCKE 376

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K+  AE +L  M++ G+  N   YT+LI+GH    N E+A  L+  M  +G   +I  Y
Sbjct: 377 RKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLY 436

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG------- 458
            A+I GLC   ++ EA  LL K  +  L+ + I YT ++    K  +  +A+        
Sbjct: 437 GALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILD 496

Query: 459 ---------------LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
                          LF  MV  G++ D   YT L+  + +Q  + ++     + I +GL
Sbjct: 497 SGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 556

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
                 YT  I G+     +  A + F  M   G APD   Y  LI+
Sbjct: 557 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT 603



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 8/374 (2%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+  L  +G  + A R   + VR     PN  T   ++    ++    R+  L+ R+ EQ
Sbjct: 128 LLSVLADRGLLDDAVRAVAR-VRELRVPPNTRTCNHILLRLARD----RSGRLVRRLFEQ 182

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
              PN  T+  +I   CK G    A  L   M + GC P++  +N++IDG  K G + E 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            +L+++  +   +AD +TY  L++   K    + A G F  M + G+  ++  ++T + A
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FC++  ++E+ K F +    G+   + TYT +I G  + G +  A+     M + G   +
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  L+ GLCK+ K+ EA      M   G+   E+   TL + +    +S  A+ +L 
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 602 SLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESN 658
            +  K   L I     LI+ LC+  ++  A     K+       + +    + +AC++S 
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 659 KYALFSDLSQRIAE 672
           K      + Q+I +
Sbjct: 483 KVPEAIAMLQKILD 496



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 140/342 (40%), Gaps = 55/342 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + GR++  +     M   G+     T +  V   C+ GLV  A ++F +M  RG
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK------- 271
           +  +  +Y  ++   C+ GR+ +A   L  M+ +G  L+  T T+L+   C +       
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 272 ---------GFRGS----------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                    G R +                 ++A  LL EM  KG + ++  +  LI GL
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C     ++A  L  K+  S   +PN   YT M+    K  K+  A  +L+++ + G  PN
Sbjct: 444 CNVHKLDEAKSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502

Query: 367 TN----------------------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
                                    YT+L+ G+ K GN   A+ L   M   G   +++ 
Sbjct: 503 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 562

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y   I G C    + EA E+  +     +  D+  Y  L+++
Sbjct: 563 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQ 604


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 202/415 (48%), Gaps = 8/415 (1%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAML-DRGAILDNATLTLLITAFCDKGFRGSIKQA 280
           D  ++ +++  YC      EA   +  M  D G      T  L++   C  G   +    
Sbjct: 153 DVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDH 212

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           FE     VR+    +  T ++LI+GL K G   +A  L  +   ++    ++HTYTA+++
Sbjct: 213 FE----AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETT-TNGCTIDIHTYTAIVN 267

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
              K +K+  A  L+E++   G  P   TY +L+ G CK+G  E A DL+  +   GCTP
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++  Y ++IDGL K+ R  EAY+L K+   R L  D + YT L+   L+  +  QA  ++
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M   G  PD+   +T+I    +  ++  + + F+     GL P +  Y+++I G  + 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
             +  A++   +M +  C PD ITY  LI GLCK   ++ A  F++ M+  G  P   T 
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             L    CK G++  A  +L+ +    ++   ++L+  LC   ++    + FH++
Sbjct: 508 NILISGLCKAGNTDAACGVLDDMSSSRFV--YSSLVDGLCKSGKLEGGCMLFHEM 560



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 202/417 (48%), Gaps = 12/417 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+  A+  +++E  +++ ++T NG     +T N ++   C++G +E A ++  ++   G
Sbjct: 265 IVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++    +  R  EA +    M  RG  LD    T LI      G    I 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG---KIP 381

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  + + M   G  P+V T + +IDGL K G    A R+F K + +    PN   Y+A+
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF-KSMEARGLAPNEVVYSAL 440

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  KM+ A  +L +MK+    P+T TY  LI G CK G+ E A    D M + GC
Sbjct: 441 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 500

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++Y YN +I GLCK G    A  +L      ++ + +  Y+ L+    K  + +    
Sbjct: 501 KPDVYTYNILISGLCKAGNTDAACGVLD-----DMSSSRFVYSSLVDGLCKSGKLEGGCM 555

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M ++G+  +    T LI   C+  ++ E+   F  AI     P    Y S+I   +
Sbjct: 556 LFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFN-AIRKEGMPHPYAYNSIISALI 613

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + G ++     +Q M +    PD +TY AL++G+   +++D A  +Y  M G+G  P
Sbjct: 614 KSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 177/362 (48%), Gaps = 4/362 (1%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  LL+  +   ++P+V T  VLI G C     E+AF +  ++       P++ T+  
Sbjct: 136 REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNL 195

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G CK  K+  A    E ++ + +  +  T++ LI G  K G   +A+ L       G
Sbjct: 196 VLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG 254

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           CT +I+ Y AI++ L K  ++QEA  L++K           TY  LL+   K    ++A+
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  ++V  G  PD+  YT+LI    ++K+  E+ K F+E  + GL      YT++I G 
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           L+ G I  A   ++ M   GC PD +T   +I GL K  ++  A + ++SM  +G++P E
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           V    L +  CK      A+ +L  + K        T N LI  LC    V  A  FF +
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494

Query: 635 LL 636
           +L
Sbjct: 495 ML 496



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 156/327 (47%), Gaps = 5/327 (1%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           ++ +VHT  A++  + + ++   A  LL+        P+  T+  LI G+C     E A+
Sbjct: 115 FQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAF 174

Query: 388 DLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            ++  M ++ G  P++  +N ++ GLCK G+V  A +  + A +R +     T++IL++ 
Sbjct: 175 AVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE-AVRRSMPVSAATFSILING 233

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
            +K     QA  L       G   DIH YT ++    + KK++E+    ++    G  PT
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY +++ G  + G +  A+   +++   GC PD +TY +LI GL K+ +  EA + ++
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEK 623
            M  +G++   V    L     + G    A  + +++     +    T++T+I  L    
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
           R+G A   F  +  +    + V  +AL
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSAL 440



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 5/263 (1%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +++  NA++D   +  R +EA  LLK       + D  T+ +L++ +    E ++A  + 
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 461 CRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             M +  G+ P +  +  ++   C+  K+  +   F EA+   +  +  T++ +I G ++
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVK 236

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A    Q     GC  D  TY A+++ L K  K+ EA    E +   G +P   T
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L    CK G    A+ +L  +        + T  +LI  L  EKR   A   F ++ 
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 637 GKDQNVDRVSLAALKNACYESNK 659
            +   +D V   AL     ++ K
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGK 379



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +RE+  D +   + + + LK A+    L       + G    +H    L+  F R K+ 
Sbjct: 79  LRREISTDAV---VKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRH 135

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ-IGCAPDNITYGA 547
           +E+    +  +     P  ET+  +I GY        A    + M +  G AP   T+  
Sbjct: 136 REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNL 195

Query: 548 LISGLCKQSKLDEACQFYESM 568
           ++ GLCK  K+  A   +E++
Sbjct: 196 VLHGLCKSGKVLAAMDHFEAV 216


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 210/467 (44%), Gaps = 11/467 (2%)

Query: 127 AKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPL 186
            +F   MR++      L+ +            M+    + GR KE   +   M  N L  
Sbjct: 242 GEFEKVMRVW----DKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR-W 245
              T   ++   C  G V+ A  V+ E+   G+  DA+ Y  +V  +C+ GRV EA + W
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            SA      + +  T  ++I    D G      + ++LLE+ V     P+  T   LI G
Sbjct: 358 DSAGF--AGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV--ACIPDTVTFGTLIHG 413

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+ G+  KAF +F +  R    + +V +Y++MI+G C   ++  A  + E+M + G  P
Sbjct: 414 LCQNGFANKAFTIFEE-ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N++ Y +LI G C+V     A  +   M   GC+P +  YN +IDGLCK  + QEA  + 
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  +     D  TY  L+       +   AL ++ +++  GL  D+  +  LI   C  
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592

Query: 486 KKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K+ E+   F +        P   TY +++ G    G I  A   +  + + G  PD I+
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           Y   I GLC   ++ E  Q  + ++ +GI P  +T   L     K G
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 222/463 (47%), Gaps = 14/463 (3%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  +  +Y +++ + C  G +  A     ++  R    D  T + L+   C    + 
Sbjct: 151 GRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLM---CGLAKQD 207

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  A +LL+EM R G +P+V  +  L+ G  K G  EK  R++ KLV+    +PN+ TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             M+ G CK  +      + ERM    L P+  TY  LI+G C+ G+ + A  +   + K
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN+++ G C+ GRVQEA++    A    L+  + TY I++          +
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR-TYNIMIKGLFDSGMVDE 386

Query: 456 ALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A+ L+  + K     PD   + TLI   C+     ++   F+EA  +G      +Y+SMI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G    G +  AVK +++M++ GC P++  Y ALISG C+  +  +A + Y  M   G S
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 575 PCEVTRVTLAYEYCK----QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
           P  +T  TL    CK    Q  S+ A  ++E+      I T  +LIR L S+K++  A  
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDALS 565

Query: 631 FFHKLLGKDQNVD----RVSLAALKNACYESNKYALFSDLSQR 669
            + ++L K   VD     + +  L +A        +FSD+ ++
Sbjct: 566 IWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 22/357 (6%)

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI--- 166
           +AG +     F+ + GFA  R+ +R Y +    L  +G  + A E+   +    A I   
Sbjct: 346 QAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDT 404

Query: 167 -------------GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
                        G   + F++  E   +G  L   + + ++   C +G +  A +V+++
Sbjct: 405 VTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEK 464

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   ++  Y  ++  +C++ R ++A R  S M D G      T   LI   C    
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE- 523

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
               ++A  +  EMV  G+ P++ T+  LI GL      + A  ++ K +     K +V 
Sbjct: 524 --KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIW-KQILYKGLKVDVM 580

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +  +I G C   K++ A  +   MKE+    PN  TY +L+ G  + G  ++A  L   
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTS 640

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           + ++G  P+I +YN  I GLC   R+ E  +LL +   R +    IT+ IL+   +K
Sbjct: 641 ITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++    +GRL +   +  +M  +G    +   N ++   C++     A  ++ +M   G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGFRGSI 277
                 +Y  ++   C+  +  EA      M++ G   D  T   LI   F DK     I
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK----KI 560

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  + ++++ KG K +V  H +LI GLC  G  ++A  +F  +    N  PN+ TY  
Sbjct: 561 DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G  +   +++A  L   + E GL P+  +Y + I G C          L+D +   G
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680

Query: 398 CTPNIYAYNAIIDGLCKKGRVQ 419
             P +  +N ++  + K G +Q
Sbjct: 681 IIPTVITWNILVRAVIKYGPIQ 702



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 18/264 (6%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA----YELLKKAFQRELQADKITYTILLSEHLKQAE 452
           GC P I ++NA++D   +  R  +A      L   AF R +  +  TY I+L     + +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ LF  + +  + PD   Y+TL+    +Q ++  +     E   +G+ P    Y +
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 513 MICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++ G  + G     ++ + ++    G  P+  TY  ++ GLCK  +  E  + +E M+  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMA 628
            + P  +T   L +  C+ GD    A +  E +   L I     N+L++  C   RV  A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 629 ALFFHKLLGKDQNVDRVSLAALKN 652
             F+          D    A L+N
Sbjct: 354 WKFW----------DSAGFAGLRN 367


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 209/434 (48%), Gaps = 27/434 (6%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G    A++VFDEM  RG+  +       VV Y +MG   EA+     M + G +  N
Sbjct: 50  CAQGDFSNAQKVFDEMLERGIEPN-------VVIYGQMG---EAEGVFGRMRESGVVTPN 99

Query: 259 A-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T   L+  +      G +K+ F L  +M++ G  P+V T   LID L K G  + A  
Sbjct: 100 LYTYKTLMDGY---SMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXN 156

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            F  + + D   PN H Y ++I GYCK   +  A  L   M+  G+  +  TY  LI G 
Sbjct: 157 CFAYMAKFD-VVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGL 215

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C +   E A  LM+ M +     N   +N +IDG CK G +++A E+  +  +  ++ + 
Sbjct: 216 CDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNV 275

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           IT++IL+     +   + A+GL+  MV  G+ PD+  YT LI   C+    KE+ +  +E
Sbjct: 276 ITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKE 335

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYF----------QRMNQIGCAPDNITYGA 547
            + AGL P   T + +I G L+DG  + A+K F           +M+   C+P+++ Y  
Sbjct: 336 MLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAI 395

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           LI GLC+   + +A +F+  M   G  P  +  VT+   + +       M++   + K  
Sbjct: 396 LIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMG 455

Query: 608 WIRTVNTLIRKLCS 621
            I+  NT I ++ S
Sbjct: 456 VIQ--NTFIYRVLS 467



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 16/380 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++ +G +K  F +  +M   GL     T   ++ +  ++G ++ A   F  M    
Sbjct: 106 LMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFD 165

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSI 277
           V  +  +Y  ++  YC+ G + EA  WL   ++R  I  D  T  +LI   CD      +
Sbjct: 166 VVPNGHAYNSLIHGYCKAGDLLEA-MWLRLEMERCGIFSDVVTYNILIKGLCDIC---RL 221

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  L+E+M       N     V+IDG CK G  EKA  +  ++   +  +PNV T++ 
Sbjct: 222 EEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTE-EXIEPNVITFSI 280

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+C +  +  A  L   M  +G++P+  TYT+LI GHCKVGN + A+ L   M   G
Sbjct: 281 LIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAG 340

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELL----------KKAFQRELQADKITYTILLSEH 447
            +PN++  + +IDGL K GR  +A ++            K   R    + + Y IL+   
Sbjct: 341 LSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGL 400

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            +     +A   F  M   G  PD+  Y T++ A  + K M +      + +  G+    
Sbjct: 401 CEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNT 460

Query: 508 ETYTSMICGYLRDGNISSAV 527
             Y  +  GY  +G + SA+
Sbjct: 461 FIYRVLSRGYRENGYLKSAL 480



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 12/327 (3%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P +    A++ G  K +  +    +   M  +   P   TY  L+   C  G+F  A  +
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            D M + G  PN+  Y  + +     GR++E+  +    +         TY  L+  +  
Sbjct: 62  FDEMLERGIEPNVVIYGQMGEAEGVFGRMRESGVVTPNLY---------TYKTLMDGYSM 112

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+   L+C M+K GL PD+  + TLI    +   +K +   F       + P    
Sbjct: 113 MGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHA 172

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y S+I GY + G++  A+     M + G   D +TY  LI GLC   +L+EA    E M 
Sbjct: 173 YNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMD 232

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVG 626
              +    V    +    CK GD   A+ +   + ++     + T + LI   C++  V 
Sbjct: 233 EVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVR 292

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA 653
            A   + +++ K    D V+  AL + 
Sbjct: 293 AAMGLYTEMVIKGIVPDVVTYTALIDG 319


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 210/467 (44%), Gaps = 11/467 (2%)

Query: 127 AKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPL 186
            +F   MR++      L+ +            M+    + GR KE   +   M  N L  
Sbjct: 242 GEFEKVMRVW----DKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR-W 245
              T   ++   C  G V+ A  V+ E+   G+  DA+ Y  +V  +C+ GRV EA + W
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
            SA      + +  T  ++I    D G      + ++LLE+ V     P+  T   LI G
Sbjct: 358 DSAGF--AGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV--ACIPDTVTFGTLIHG 413

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           LC+ G+  KAF +F +  R    + +V +Y++MI+G C   ++  A  + E+M + G  P
Sbjct: 414 LCQNGFANKAFTIFEE-ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N++ Y +LI G C+V     A  +   M   GC+P +  YN +IDGLCK  + QEA  + 
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  +     D  TY  L+       +   AL ++ +++  GL  D+  +  LI   C  
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592

Query: 486 KKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            K+ E+   F +        P   TY +++ G    G I  A   +  + + G  PD I+
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           Y   I GLC   ++ E  Q  + ++ +GI P  +T   L     K G
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 221/463 (47%), Gaps = 14/463 (3%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  +  +Y +++ + C  G +  A     ++  R    D  T + L+   C    + 
Sbjct: 151 GRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLM---CGLAKQD 207

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  A +LL+EM R   +P+V  +  L+ G  K G  EK  R++ KLV+    +PN+ TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             M+ G CK  +      + ERM    L P+  TY  LI+G C+ G+ + A  +   + K
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G   +   YN+++ G C+ GRVQEA++    A    L+  + TY I++          +
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR-TYNIMIKGLFDSGMVDE 386

Query: 456 ALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A+ L+  + K     PD   + TLI   C+     ++   F+EA  +G      +Y+SMI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G    G +  AVK +++M++ GC P++  Y ALISG C+  +  +A + Y  M   G S
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 575 PCEVTRVTLAYEYCK----QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
           P  +T  TL    CK    Q  S+ A  ++E+      I T  +LIR L S+K++  A  
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDALS 565

Query: 631 FFHKLLGKDQNVD----RVSLAALKNACYESNKYALFSDLSQR 669
            + ++L K   VD     + +  L +A        +FSD+ ++
Sbjct: 566 IWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 22/357 (6%)

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEI--- 166
           +AG +     F+ + GFA  R+ +R Y +    L  +G  + A E+   +    A I   
Sbjct: 346 QAGRVQEAWKFWDSAGFAGLRN-LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDT 404

Query: 167 -------------GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
                        G   + F++  E   +G  L   + + ++   C +G +  A +V+++
Sbjct: 405 VTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEK 464

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   ++  Y  ++  +C++ R ++A R  S M D G      T   LI   C    
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE- 523

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
               ++A  +  EMV  G+ P++ T+  LI GL      + A  ++ K +     K +V 
Sbjct: 524 --KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIW-KQILYKGLKVDVM 580

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            +  +I G C   K++ A  +   MKE+    PN  TY +L+ G  + G  ++A  L   
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTS 640

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           + ++G  P+I +YN  I GLC   R+ E  +LL +   R +    IT+ IL+   +K
Sbjct: 641 ITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++    +GRL +   +  +M  +G    +   N ++   C++     A  ++ +M   G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA-FCDKGFRGSI 277
                 +Y  ++   C+  +  EA      M++ G   D  T   LI   F DK     I
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK----KI 560

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  + ++++ KG K +V  H +LI GLC  G  ++A  +F  +    N  PN+ TY  
Sbjct: 561 DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G  +   +++A  L   + E GL P+  +Y + I G C          L+D +   G
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680

Query: 398 CTPNIYAYNAIIDGLCKKGRVQ 419
             P +  +N ++  + K G +Q
Sbjct: 681 IIPTVITWNILVRAVIKYGPIQ 702



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 18/264 (6%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA----YELLKKAFQRELQADKITYTILLSEHLKQAE 452
           GC P I ++NA++D   +  R  +A      L   AF R +  +  TY I+L     + +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ LF  + +  + PD   Y+TL+    +Q ++  +     E   + + P    Y +
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 513 MICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++ G  + G     ++ + ++    G  P+  TY  ++ GLCK  +  E  + +E M+  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMA 628
            + P  +T   L +  C+ GD    A +  E +   L I     N+L++  C   RV  A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 629 ALFFHKLLGKDQNVDRVSLAALKN 652
             F+          D    A L+N
Sbjct: 354 WKFW----------DSAGFAGLRN 367


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 213/424 (50%), Gaps = 7/424 (1%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y +++  +CR  R++ A   L  M+  G   D  TL  L+  FC  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC-H 160

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I  A  L+++MV  G+KP+  T T LI GL       +A  L  ++V+    +P+
Sbjct: 161 GNR--ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPD 217

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY A+++G CK    + A  LL +M+   +  N   Y+++I   CK  + + A +L  
Sbjct: 218 LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 277

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  PN+  Y+++I  LC  GR  +A  LL    +R++  + +T++ L+   +K+ 
Sbjct: 278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +A  L+  M+K  ++P+I  Y++LI  FC   ++ E+++  +  I     P   TY 
Sbjct: 338 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I G+ +   +   ++ F+ M+Q G   + +TY  LI G  +    D A   ++ M+  
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
           G+ P  +T   L    CK G  A AM++ E L +      I T N +I  +C   +  M 
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517

Query: 629 ALFF 632
            ++F
Sbjct: 518 GIYF 521



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E+M   G   N+YT+ +LI+  C+      A  L  K+++   Y+P++ T  ++++G+C 
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL-GYEPDIVTLNSLLNGFCH 160

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +++ A  L+++M E G  P+T T+T+LI+G         A  L+D M + GC P++  
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y A+++GLCK+G    A  LL K    +++A+ + Y+ ++    K      AL LF  M 
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+ P++  Y++LI+  C   +  ++ +   + I   + P   T++++I  +++ G + 
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A K ++ M +    P+  TY +LI+G C   +L EA Q  E MI K   P  VT  TL 
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 585 YEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
             +CK       M +   + ++  +    T  TLI      +    A + F +++
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 4/399 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F    RL    +++ +M   G      TLN ++   C    +  A  + D+M   G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++  ++       + +EA   +  M+ RG   D  T   ++   C    RG   
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK---RGDTD 235

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL +M     + NV  ++ +ID LCK    + A  LF ++  +   +PNV TY+++
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 294

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           IS  C   + + A  LL  M E+ + PN  T+++LI    K G   +A  L + M K   
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI+ Y+++I+G C   R+ EA ++L+   +++   + +TY  L++   K     + + 
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  M + GL  +   YTTLI  F + +    ++  F++ ++ G+ P   TY  ++ G  
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           ++G ++ A+  F+ + +    PD  TY  +I G+CK  K
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 8/364 (2%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  + +S  + P++  ++ ++S   K  K +      E+M+  G+  N  TY  
Sbjct: 60  DDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  L+  M K G  P+I   N++++G C   R+ +A  L+ +  +  
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D +T+T L+       +  +A+ L  RMV+ G  PD+  Y  ++   C++     + 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               +   A +      Y+++I    +  +   A+  F  M   G  P+ ITY +LIS L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
           C   +  +A +    MI + I+P  VT   L   + K+G    A  + E + K+     I
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSD 665
            T ++LI   C   R+G A      ++ KD   + V+   L N   ++ +      LF +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 666 LSQR 669
           +SQR
Sbjct: 419 MSQR 422



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 6/213 (2%)

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++AF  +   D   Y  +L   L   E   A+GLF  M ++   P I  ++ L++A  + 
Sbjct: 35  RRAFSGKTSYD---YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKM 91

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K      F ++    G+     TY  +I  + R   +S A+    +M ++G  PD +T 
Sbjct: 92  NKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTL 151

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
            +L++G C  +++ +A    + M+  G  P  VT  TL +       ++ A+ +++ + +
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +     + T   ++  LC      +A    +K+
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           TS++N ++        V+ AE+ F     R V  D  ++  ++   CR+G++ +A     
Sbjct: 156 TSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +   G     AT   LI  +C KG  G++     LL+EMV  G  P   T  VLI+G C
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYC 275

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K   T  A R+F ++ +      +V TY ++ISG C E K+     L+E M++ GL PN 
Sbjct: 276 KNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+  ++ G CK G    A D +D M +    P++  Y  +IDG  + G++++A  + + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ +  +  TY  L++   +  + + A GL   M + G+  D+  Y  LI A C + +
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++++ K   E    GL P   TY ++I G+   GNI SA +   RM +     + +TY  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            I   C+  K+DEA      M+ K + P  +T     YE  K+G
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT-----YETIKEG 553



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 172/366 (46%), Gaps = 7/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE---LGLVEYAEEVFDEMC 215
           ++S    IG+L++   +  ++   GL    +T N ++   C+    G + + + +  EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+   A ++ +++  YC+      A R    M  +G      T   LI+  C +G   
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG--- 313

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++  +L+EEM   G  PN  T   ++ G CKKG    A   ++  +   N +P+V  Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND-WIDGMTERNVEPDVVIY 372

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T +I GY +  KM  A  + E M ++G+ PN  TY  LI G  + G++  A  L+D M +
Sbjct: 373 TILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G   ++  YN +I  LC KG V++A +LL +  +  L+ + +TY  ++     +   K 
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +  RM K     ++  Y   I  FC+  KM E+     E +   L P   TY ++  
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552

Query: 516 GYLRDG 521
           G +  G
Sbjct: 553 GMMEKG 558



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 167/342 (48%), Gaps = 7/342 (2%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           +L+  L +     +A+  FL    S   ++P+  +  A+++G    ++++ AE       
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            + + P+  T+ ++I G C++G   +A D+   +   G  P++  YN++IDG CKKG   
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 420 EAYE---LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
             Y    LLK+  +  +    +T+ +L++ + K + T  A+ +F  M + G+   +  Y 
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI+  C + K++E  K  +E    GL P + T+  ++ G+ + G ++ A  +   M + 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              PD + Y  LI G  +  K+++A    E+M  KGISP   T   L   + + GD  +A
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L+ + +K     + T N LI  LC +  V  A     ++
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 10/295 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N ++   C  G VE   ++ +EM   G+  +  ++  ++  +C+ G
Sbjct: 289 EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKG 348

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--GSIKQAFELLEEMVRKGWKPN 295
            + +A+ W+  M +R    D    T+LI      G+R  G ++ A  + E M +KG  PN
Sbjct: 349 MMADANDWIDGMTERNVEPDVVIYTILI-----DGYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V T+  LI G  + G    A  L L  ++    + +V TY  +I   C + ++ +A  LL
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGL-LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + M E GL PN  TY ++I G C  GN + AY++   M K     N+  YN  I   C+ 
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G++ EA +LL +   + L  + ITY  +    +++  T    G  C + +A  NP
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG--CTVSQASENP 575



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 44/240 (18%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    +   ++  +  +G++++  ++   M   G+    +T N ++      G    A
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             + DEM  +G+ AD  +Y +++ A C  G V +A + L  M + G   ++ T   +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FCDK   G+IK A+E+   M +   + NV T+ V I   C+ G                 
Sbjct: 484 FCDK---GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG----------------- 523

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
                              KM+ A  LL  M ++ L+PN  TY ++     K G  E+ Y
Sbjct: 524 -------------------KMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 35/157 (22%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++ F+  G  +    ++ EM   G+     T N ++G  C  G V  A ++ DEM  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 217 --------------RGVC---------------------ADASSYKLMVVAYCRMGRVTE 241
                         +G C                     A+  +Y + +  +C++G++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           A+  L+ MLD+  + +  T   +     +KG+   I+
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 233/520 (44%), Gaps = 12/520 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG---LPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           ++ S     R +E   MV  M   G    P + S  N V+    + G V  A  +F+EM 
Sbjct: 201 VIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS-FNTVIHGFFKQGEVSKACNLFNEMV 259

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            +GV  D  +Y  +V A C+   + +A+  L  M+D+G   D  T   +I  +      G
Sbjct: 260 QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY---SCSG 316

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             K++ ++  +M  KG  P+  T +  +  LCK G ++ A  +F + + +  + P++ +Y
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF-QYMTTKGHMPDIVSY 375

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           + ++ GY  E +      L   M ++G++ N +    LI  H K G  + A  +   M  
Sbjct: 376 SILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQG 435

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G  PN+  Y+ +I   C+ GR+ +A E   +     ++ +   Y  L+       +  +
Sbjct: 436 QGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVK 495

Query: 456 ALGLFCRMVKAGLN-PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A      M+  GL+ P+I  ++++I + C + ++ +++  F   I  G  PT  T+ S+I
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY   G +  A      M  +G  PD +T   L+SG CK  K+D+    +  M+ K + 
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615

Query: 575 PCEVTRVTLAYEYCKQG-DSATAMIILESLDK--KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  VT   +     + G  SA   +  E +D    + I T   L++ LC       A   
Sbjct: 616 PTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 675

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
           FHKL   D   D   L  + NA Y+  +    +DL   I+
Sbjct: 676 FHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIS 715



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 8/475 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  KE   M  +MT+ GL   T T +  +   C+ G  + AEE+F  M  +G   D  SY
Sbjct: 316 GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSY 375

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  Y   GR  + +    +M D+G + +   + +LI+A      RG + +A  +  E
Sbjct: 376 SILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK---RGMMDEAMLVFTE 432

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G +PNV T++ LI   C+ G    A   F +++ S   +PN   Y ++I G+C   
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI-SIGIEPNTAVYHSLIHGFCMHG 491

Query: 347 KMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            + +A+  +  M  +GL  PN   ++S+I+  C  G    A D+ +L+   G  P I  +
Sbjct: 492 DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF 551

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N++IDG C  G++++A+ +L       ++ D +T   L+S + K  +    L LF  M+ 
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             + P    Y  ++    R  +   ++K F E I +G     +TY  ++ G  R+     
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 671

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+  F ++  + C  D      +I+ L K  + +EA   + ++   G+ P   T   +  
Sbjct: 672 AITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIR 731

Query: 586 EYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLG 637
              K+G    A  +  S++K       R +N +IR L  +  +  A  +  K+ G
Sbjct: 732 NLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 786



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 208/450 (46%), Gaps = 20/450 (4%)

Query: 141 TSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGFSMVIEMTNNGLP 185
           +SL  +G  + A E+ Q M +                +A  GR  +  ++   M + G+ 
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
                +N ++    + G+++ A  VF EM  +GV  +  +Y  ++ A+CRMGR+ +A   
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK 464

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTVLID 304
            S M+  G   + A    LI  FC     G + +A E + EM+ KG  +PN+   + +I 
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFC---MHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIH 521

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            LC +G    A  +F  LV     +P + T+ ++I GYC   KM +A  +L+ M   G+ 
Sbjct: 522 SLCIEGRVMDAQDVF-NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 580

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T  +L+ G+CK G  +    L   M  +   P    YN ++DGL + GR   A ++
Sbjct: 581 PDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
             +        D  TY ILL    +   T +A+ LF ++       DI    T+I A  +
Sbjct: 641 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYK 700

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            ++ +E+   F    T+GL P   TY  MI   L++G++  A   F  M + GCAP +  
Sbjct: 701 VRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRL 760

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGIS 574
              +I  L ++  + +A  +   + G  IS
Sbjct: 761 LNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 790



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 217/487 (44%), Gaps = 81/487 (16%)

Query: 234 CRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           C   R  EA D  L  M +   + D  +   +I + C        ++A ++++ M ++G 
Sbjct: 170 CHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDS---RSQEALDMVQRMAKEGG 226

Query: 293 K--PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           +  P+V +   +I G  K+G   KA  LF ++V+     P+V TY +++   CK   M++
Sbjct: 227 RCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQK-GVVPDVGTYNSIVDALCKARAMDK 285

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE +L +M ++G+ P+  TY ++I+G+   G+++ +  +   M  +G  P+   +++ + 
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILL-------------------------- 444
            LCK GR ++A E+ +    +    D ++Y+ILL                          
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS 405

Query: 445 ---------SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
                    S H K+    +A+ +F  M   G+ P++  Y+TLI+AFCR  ++ ++ + F
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN--------------------- 534
            + I+ G+ P    Y S+I G+   G++  A ++   M                      
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525

Query: 535 ---------------QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
                           IG  P  +T+ +LI G C   K+++A    ++M+  GI P  VT
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585

Query: 580 RVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLL 636
             TL   YCK G     +I+  E L KK+   TV  N ++  L    R   A   FH+++
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645

Query: 637 GKDQNVD 643
                VD
Sbjct: 646 DSGTAVD 652


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 231/542 (42%), Gaps = 46/542 (8%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +V EM ++G+ +     +  + +  + G++E A+ +FD M A G+   A +Y  ++  YC
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R   V +    L  M  R  ++   T   ++   C  G    +  A+ +++EM+  G +P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG---DLDGAYNIVKEMIASGCRP 450

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           NV  +T LI    +      A R+ LK ++     P++  Y ++I G  K ++M+ A   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRV-LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L  M E GL PN  TY + I G+ +   F  A   +  M + G  PN      +I+  CK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           K +V EA    +    + +  D  TYT+L++   K  +   A  +F  M   G+ PD+ +
Sbjct: 570 KEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y  LI  F +   M+++   F E +  GL P    Y  ++ G+ R G I  A +    M+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P+ +TY  +I G CK   L EA + ++ M  KG+ P      TL    C+  D  
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 595 TAMIILESLDKKL------------WI-----------------------------RTVN 613
            A+ I  +  K              W+                              T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQRIAE 672
            +I  LC E  +  A   FH++   +     ++  +L N   +  + A +F    + IA 
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 673 GI 674
           GI
Sbjct: 870 GI 871



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 216/448 (48%), Gaps = 4/448 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +I RL++  S+++EM + G+ L   T + ++    +    + A+ +  EM + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +      Y   +    + G + +A      M+  G I        LI  +C +    +++
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK---NVR 399

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q +ELL EM ++    + YT+  ++ G+C  G  + A+ +  +++ S   +PNV  YT +
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTL 458

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  + +  +   A  +L+ MKEQG+ P+   Y SLI G  K    + A   +  M + G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN + Y A I G  +      A + +K+  +  +  +K+  T L++E+ K+ +  +A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACS 578

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  MV  G+  D   YT L+    +  K+ ++E+ F+E    G+ P   +Y  +I G+ 
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN+  A   F  M + G  P+ I Y  L+ G C+  ++++A +  + M  KG+ P  V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T  T+   YCK GD A A  + + +  K
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLK 726



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 89/567 (15%)

Query: 75  QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMR 134
           +Q + R +    NL I+I+    E  ++V+ S   +  S + LSFF W          + 
Sbjct: 43  KQENWRDTLVSSNLSIEINP---EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLD 98

Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSS-------FAEIGRLKEGFSMVIEMTNNGLPLI 187
            +   A  L + G+FE+A  V++ M+         ++ I R  + F   +  +++G+   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEF---VGKSDDGV--- 152

Query: 188 TSTLNRVVGIACE----LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
                 + GI  +     G +E A  VF       +    S  K+++ A  R  R+    
Sbjct: 153 ------LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFW 206

Query: 244 RWLSAMLDRGAILDNATLTLLITAFC---------------DKGFRGS---IKQAFELLE 285
                M++R  + D  T  +LI A C               +K FR +   +  A +L E
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNVHTYTAMISG 341
            M+ KG  P  YT+ VLIDGLCK    E A  L +++    V  DN     HTY+ +I G
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN-----HTYSLLIDG 321

Query: 342 Y-----------------------------------CKEEKMNRAEMLLERMKEQGLLPN 366
                                                KE  M +A+ L + M   GL+P 
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y SLI G+C+  N  + Y+L+  M K     + Y Y  ++ G+C  G +  AY ++K
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +      + + + YT L+   L+ +    A+ +   M + G+ PDI  Y +LI    + K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +M E+  F  E +  GL P   TY + I GY+     +SA KY + M + G  P+ +   
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGI 573
            LI+  CK+ K+ EAC  Y SM+ +GI
Sbjct: 562 GLINEYCKKEKVIEACSAYRSMVDQGI 588



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 230/487 (47%), Gaps = 21/487 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++  R+ E  S ++EM  NGL     T    +    E      A++   EM   G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-I 277
           V  +      ++  YC+  +V EA     +M+D+G + D  T T+L+       F+   +
Sbjct: 553 VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL----FKNDKV 608

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A E+  EM  KG  P+V+++ VLI+G  K G  +KA  +F ++V  +   PNV  Y  
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNM 667

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+C+  ++ +A+ LL+ M  +GL PN  TY ++I G+CK G+   A+ L D M  +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+ + Y  ++DG C+   V+ A  +     ++   +    +  L++   K  +T+   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 458 GLFCRMVKAGLN----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +  R++    +    P+   Y  +I   C++  ++ +++ F +   A L PT  TYTS+
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           + GY + G  +     F      G  PD+I Y  +I+   K+    +A    + M  K  
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 574 --SPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLC--SEK 623
               C+++  T   L   + K G+   A  ++E++ +  +I    TV  LI + C  S +
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966

Query: 624 RVGMAAL 630
           RV   A+
Sbjct: 967 RVEADAV 973



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 220/489 (44%), Gaps = 42/489 (8%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A ++ + M  +G+     +Y +++   C++ R+ +A   L  M   G  LDN T +L
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI     KG      +   L+ EMV  G     Y +   I  + K+G  EKA  LF  ++
Sbjct: 318 LIDGLL-KGRNADAAKG--LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S    P    Y ++I GYC+E+ + +   LL  MK++ ++ +  TY +++ G C  G+ 
Sbjct: 375 AS-GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 384 ERAYDLMDLMGKEGCTPN-----------------------------------IYAYNAI 408
           + AY+++  M   GC PN                                   I+ YN++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I GL K  R+ EA   L +  +  L+ +  TY   +S +++ +E   A      M + G+
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P+    T LI  +C+++K+ E+   ++  +  G+    +TYT ++ G  ++  +  A +
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            F+ M   G APD  +YG LI+G  K   + +A   ++ M+ +G++P  +    L   +C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 589 KQGDSATAMIILESLD-KKLWIRTVN--TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           + G+   A  +L+ +  K L    V   T+I   C    +  A   F ++  K    D  
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733

Query: 646 SLAALKNAC 654
               L + C
Sbjct: 734 VYTTLVDGC 742



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 183/435 (42%), Gaps = 54/435 (12%)

Query: 275 GSIKQAFELLEEMVRKGWK-PNVYTHTV------------------LIDGLCKKGWTEKA 315
           GS ++A  ++E M+ + W    V++  V                  L DG   KG+ E+A
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170

Query: 316 FRLF-----LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +F     L+LV      P +     ++    +  +++    + + M E+ ++ +  TY
Sbjct: 171 VFVFSSSMGLELV------PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKE---------------------GCTPNIYAYNAII 409
             LI  HC+ GN +   D++    KE                     G  P  Y Y+ +I
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           DGLCK  R+++A  LL +     +  D  TY++L+   LK      A GL   MV  G+N
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
              + Y   I    ++  M++++  F   I +GL P  + Y S+I GY R+ N+    + 
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
              M +        TYG ++ G+C    LD A    + MI  G  P  V   TL   + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
                 AM +L+ + ++     +   N+LI  L   KR+  A  F  +++      +  +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524

Query: 647 LAALKNACYESNKYA 661
             A  +   E++++A
Sbjct: 525 YGAFISGYIEASEFA 539



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 27/373 (7%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           + Y V    L  N   + A E+ + M               ++ F+++G +++  S+  E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL       N ++G  C  G +E A+E+ DEM  +G+  +A +Y  ++  YC+ G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA R    M  +G + D+   T L+   C       +++A  +     +KG   +   
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTN-KKGCASSTAP 768

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRS--DNY-KPNVHTYTAMISGYCKEEKMNRAEMLL 355
              LI+ + K G TE    +  +L+    D + KPN  TY  MI   CKE  +  A+ L 
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
            +M+   L+P   TYTSL+ G+ K+G     + + D     G  P+   Y+ II+   K+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888

Query: 416 GRVQEAYELLKKAFQRELQADKITYTI-----LLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G   +A  L+ + F +    D    +I     LLS   K  E + A  +   MV+    P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948

Query: 471 DIHAYTTLIAAFC 483
           D      LI   C
Sbjct: 949 DSATVIELINESC 961



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 44/259 (16%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------------------- 396
           +++ EQ L    ++++ L    C  G+FE+A  +++ M +                    
Sbjct: 90  QKVTEQKL----DSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFV 145

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G + +   +  + DG   KG ++EA  +   +   EL        +LL   L+       
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK-------ESEKFFQEA----------- 498
             ++  MV+  +  D+  Y  LI A CR   ++       ++EK F+ A           
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 499 ---ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
              I  GL P K TY  +I G  +   +  A      M+ +G + DN TY  LI GL K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 556 SKLDEACQFYESMIGKGIS 574
              D A      M+  GI+
Sbjct: 326 RNADAAKGLVHEMVSHGIN 344


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 195/384 (50%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + +V   C  G+VE A +V ++M   G  A+ +   +++   C+ GRV +A ++L+ M
Sbjct: 318 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 377

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C +  R   + A ELL+EMVRK   PN  T    I  LC+K
Sbjct: 378 GSYGCSPDTISYTTVLKGLC-RAERW--EDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A  + ++ +     + N+ TY A+++G+C + +++ A   LE        PNT T
Sbjct: 435 GLIEQA-TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTIT 490

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M ++ C PN+  +N ++   C+KG + EA EL+++  
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + ITY  LL    K   +++AL L   +V  G++PDI  Y+++I    R+ +++
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ K F      G+ P    Y  ++    +  N   A+ +F  M   GC P+ +TY  LI
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L E       +  +G+
Sbjct: 671 EGLANEDFLKETRDLLRELCSRGV 694



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 215/463 (46%), Gaps = 23/463 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     GR+ +    +  +++ G    T +   V+   C     E  EE+F EM  + 
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++ ++V  +CR G V  A + L  M   G   +     ++I   C +G    + 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG---RVD 368

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+ L  M   G  P+  ++T ++ GLC+    E A  L  ++VR  N  PN  T+   
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPPNEVTFNTF 427

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++  + +A ML+E+M E G   N  TY +L+ G C  G  + A +L   M    C
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 484

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++ GLC   R+  A ELL +  Q++   + +T+ +L+S   ++    +A+ 
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  P++  Y TL+    +    +E+ +     ++ G+ P   TY+S+I    
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+  +  A+K F  +  +G  P  + Y  ++  LCK+   D A  F+  M+  G  P E+
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           T +TL                +E L  + +++    L+R+LCS
Sbjct: 665 TYITL----------------IEGLANEDFLKETRDLLRELCS 691



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 10/409 (2%)

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A R +     RG   D    T LI   C    RG    A  +L    R G   +V+ +  
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCR---RGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+ G C+ G  + A RL    + S    P+ +TYT +I G C   ++  A  LL+ M  +
Sbjct: 150 LVAGYCRYGQLDAARRL----IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P+  TYT L+   CK   F +A +++D M  +GCTPNI  YN II+G+C++GRV +A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            E L +      Q D ++YT +L         +    LF  M++    P+   +  L+  
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           FCR   ++ + +  ++    G          +I    + G +  A ++   M   GC+PD
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            I+Y  ++ GLC+  + ++A +  + M+ K   P EVT  T     C++G    A +++E
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445

Query: 602 SLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
            + +   ++ I T N L+   C + RV  A   F+ +  K   +   +L
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTL 494



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 222/480 (46%), Gaps = 17/480 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+ +   G+L     ++  M     P+     T   ++   C+ G V  A  + D+M  
Sbjct: 150 LVAGYCRYGQLDAARRLIASM-----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 204

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y +++ A C+     +A   L  M  +G   +  T  ++I   C +   G 
Sbjct: 205 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE---GR 261

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A E L  +   G++P+  ++T ++ GLC     E    LF +++   N  PN  T+ 
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFD 320

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C+   + RA  +LE+M   G   NT     +I   CK G  + A+  ++ MG  
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC+P+  +Y  ++ GLC+  R ++A ELLK+  ++    +++T+   +    ++   +QA
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L  +M + G   +I  Y  L+  FC Q ++  + + F    +    P   TYT+++ G
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKPNTITYTTLLTG 497

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
                 + +A +    M Q  CAP+ +T+  L+S  C++  +DEA +  E M+  G +P 
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
            +T  TL     K  +S  A+ +L  L        I T +++I  L  E RV  A   FH
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 205/447 (45%), Gaps = 13/447 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + D   +RG   D      ++   CR GR ++A R L A    G  +D      L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C  G    +  A  L+  M      P+ YT+T +I GLC +G   +A  L   ++   
Sbjct: 153 GYCRYG---QLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 205

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             +P+V TYT ++   CK     +A  +L+ M+ +G  PN  TY  +I G C+ G  + A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            + ++ +   G  P+  +Y  ++ GLC   R ++  EL  +  ++    +++T+ +L+  
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++A+ +  +M   G   +      +I   C+Q ++ ++ +F     + G  P 
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +YT+++ G  R      A +  + M +  C P+ +T+   I  LC++  +++A    E
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445

Query: 567 SMIGKGISPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            M   G   CEV  VT   L   +C QG   +A+ +  S+  K    T  TL+  LC+ +
Sbjct: 446 QMSEHG---CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 502

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
           R+  AA    ++L KD   + V+   L
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVL 529



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 7/309 (2%)

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           RA  L++R   +G  P+    T LI   C+ G    A  ++    + G   +++AYN ++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G C+ G++  A  L+       +  D  TYT ++     +    +AL L   M+  G  
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P +  YT L+ A C+     ++ +   E    G  P   TY  +I G  R+G +  A ++
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
             R++  G  PD ++Y  ++ GLC   + ++  + +  M+ K   P EVT   L   +C+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            G    A+ +LE +            N +I  +C + RV  A  F + +     + D +S
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 647 -LAALKNAC 654
               LK  C
Sbjct: 389 YTTVLKGLC 397



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++      RL     ++ EM          T N +V   C+ GL++ A E+ ++M   G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++    +     EA   L  ++  G   D  T + +I     +       
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F +++++   G +P    +  ++  LCK+  T+ A   F  +V S+   PN  TY  +
Sbjct: 614 KMFHIVQDL---GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV-SNGCMPNELTYITL 669

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I G   E+ +     LL  +  +G+L
Sbjct: 670 IEGLANEDFLKETRDLLRELCSRGVL 695



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 51/136 (37%)

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A +   R    G APD      LI  LC++ +  +A +   +    G +       TL  
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
            YC+ G    A  ++ S+       T   +IR LC   RVG A      +L +      V
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 646 SLAALKNACYESNKYA 661
           +   L  A  +S  + 
Sbjct: 213 TYTVLLEAVCKSTGFG 228


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 225/503 (44%), Gaps = 73/503 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +   ++E FS+  ++ + G+       N ++   C+    + A+ +F EM  RG
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ A C+ G + +A      M D+G  +       LI  +C +G   S+ 
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG---SLD 425

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL  MV++G  P   +++ LI GLC+ G    A  L  ++        N +T+TA+
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAER-GIAWNNYTFTAL 484

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK++KM+ A  L ++M +  ++PN  T+  +I G+C VGN  +A+ L D M + G 
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 399 TPNIYAYNAIIDGLC-----------------------------------KKGRVQEAYE 423
            P+ Y Y ++I GLC                                   ++GR  E Y 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYH 604

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   R ++ D +++TI++   LKQ + +++  LF  M + G+ PD   YT +I A  
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +++ M ++   + + +  G  P   T+T +I    + G + SA    + M      P+  
Sbjct: 665 KEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 544 TYGA----------------------------------LISGLCKQSKLDEACQFYESMI 569
           TY                                    LI GLCK  K+ EA      + 
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKIT 784

Query: 570 GKGISPCEVTRVTLAYEYCKQGD 592
             G SP  ++  T+ +E CK GD
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGD 807



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 215/447 (48%), Gaps = 4/447 (0%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ E   L     +V+ M + G+       N ++   C+   V+ A EV + M   GV
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
            AD  +Y+ +V  +CRM  +  A R    M+  G +   A  + +I     K     +++
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL---VEE 321

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF L  ++   G  PNV+ +  LID LCK    + A RLF K +     +PN  TY  +I
Sbjct: 322 AFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF-KEMAGRGLEPNEVTYAILI 380

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK   +  A  L ++M+++G+      Y SLI G+CK G+ +RA  L+  M KEG T
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P   +Y+ +I GLC+ G +  A EL ++  +R +  +  T+T L++   K  +  +A  L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M+ + + P+   +  +I  +C    ++++ + + + +  GL P   TY S+I G   
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A ++   +       +N +  AL+ GL ++ +  E    ++ M  +G+    V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
              + Y   KQ D   + ++   + ++
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 219/461 (47%), Gaps = 11/461 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G+  +  +   ++ +  ++ +   A      ML  G  LD    T  I A+C+     
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR--- 212

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A  L+  M  +G K +   + VL+ GLCK    ++A  +   +V        V TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TY 271

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+C+ E++  A  +   M   G +P+    + +I    K    E A+ L   +G 
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN++AYNA+ID LCK  R  +A  L K+   R L+ +++TY IL+    K+   + 
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF +M   G+   ++ Y +LI  +C+Q  +  +       +  GL PT  +Y+ +I 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R+G++SSA++  + M + G A +N T+ ALI+G CK  K+DEA + ++ MI   + P
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
            EVT   +   YC  G+   A  + + + +   K    T  +LI  LC    V  A  F 
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
             L      ++  SL AL    +   +    Y L+ +++ R
Sbjct: 572 ADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVR 612



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 38/451 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G L     ++  M   GL    ++ + ++   C  G +  A E+  EM  RG
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG 473

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+  ++ EA R    M+D   I +  T  ++I  +C     G+I+
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC---LVGNIR 530

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR-------------------LF 319
           +AF+L ++MV  G KP+ YT+  LI GLC      KA                     L 
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590

Query: 320 LKLVRSDNYKPNVH---------------TYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
             L R   +    H               ++T ++    K+    ++ +L   MKEQG+ 
Sbjct: 591 YGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   YT +I    K  N  +A +  D M  +G +PN   +  +I+ LCK G +  A  L
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELL 710

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K+     +  +K TY   L     + + ++A  L   M++  L   I ++  LI   C+
Sbjct: 711 CKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCK 769

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             K++E+    ++   +G  P   +Y+++I    + G+I+ A + +  M   G  PD + 
Sbjct: 770 AGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 829

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISP 575
           Y   I       + D+A   Y +MI  G+ P
Sbjct: 830 YNIFIRWCNVHGESDKALGIYTNMIRSGVQP 860



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 197/405 (48%), Gaps = 7/405 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  ++ E   +  +M ++ +     T N ++   C +G +  A +++D+M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y+ ++   C    V++A+ +++ + +  A+L+N +LT L+       FR G  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGL----FREGRF 599

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + + L +EM  +G K ++ + T+++    K+   EK+  LF ++ +    KP+   YT 
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGVKPDDIFYTC 658

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI    KEE M +A    ++M   G  PNT T+T LI   CK G    A  L   M    
Sbjct: 659 MIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN + YN  +D    +G +++A +L     Q  L A  +++ IL+    K  + ++A+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAI 777

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  ++ ++G +PD  +Y+T+I   C+   + ++ + + E +  GL P    Y   I   
Sbjct: 778 DLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
              G    A+  +  M + G  P+  TY AL+SG+      D +C
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 202/441 (45%), Gaps = 7/441 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C  G VE    + +     G    A  Y +++  YCR G V      L  M  +G +   
Sbjct: 287 CLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTV 346

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   +I      G +  + +   LL EM  +G  PNV  +  +I  LCK     +A  +
Sbjct: 347 VTYGAIIHWL---GRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             ++V S  + P+V T+  +I+ +C+E  +  A  LL     + L PN  +YT LI+G C
Sbjct: 404 LNQMVAS-RFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFC 462

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
             G    A DL+  M   G TP++    A+I GL   G+V EA  + +K  +R++  D  
Sbjct: 463 VRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDAN 522

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y +L+S   K+     A  L   M++  + PD   YTTLI  F R  K+ ++ K F+  
Sbjct: 523 IYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFM 582

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G +     Y +MI GY + G ++ AV     M ++GC PD  TY  LI G  K+  +
Sbjct: 583 EEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDI 642

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTL 615
             A +F   M+ +   P  VT  +L   YC  G++ +A ++  S+  +     V     L
Sbjct: 643 KAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVL 702

Query: 616 IRKLCSEKRVGMAALFFHKLL 636
           I  L  + +   AA +F  +L
Sbjct: 703 IGSLFKKDKAIQAAAYFEHML 723



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 201/448 (44%), Gaps = 19/448 (4%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           S++ EM   GL       N V+   C+      A  V ++M A     D  ++  ++ A+
Sbjct: 367 SLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAF 426

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           CR G V EA + L   + R    +  + T LI  FC    RG +  A +LL EM+ +G  
Sbjct: 427 CREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFC---VRGEVMVASDLLVEMIGRGHT 483

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+V T   LI GL   G  ++A  +  K+       P+ + Y  +ISG CK+  ++ A+ 
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAER-QVMPDANIYNVLISGLCKKRMLSAAKN 542

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL  M EQ + P+   YT+LI G  +      A  + + M ++G   +I AYNA+I G C
Sbjct: 543 LLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYC 602

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G + EA   +    +     D+ TYT L+  + K+ + K AL   C M+K    P+I 
Sbjct: 603 KSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIV 662

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y +LI  +C       +E  F    + GLFP    YT +I    +      A  YF+ M
Sbjct: 663 TYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM 722

Query: 534 NQIGCAPDNITYGALISGL--CKQSKLDEAC-------------QFYESMIGKGISPCEV 578
               C+P++ T   L++GL  C+   ++  C               ++ +I  G+ P   
Sbjct: 723 LLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRIS 782

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
               + +  C+      AM + E +  K
Sbjct: 783 AYNAIIFSLCRHNMLGKAMELKEKMSNK 810



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 161/374 (43%), Gaps = 19/374 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F   G +     +++EM   G      TL  ++      G V+ A  V ++M  R 
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  DA+ Y +++   C+   ++ A   L  ML++    D    T LI  F         +
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + FE +EE   KG   ++  +  +I G CK G   +A  + +  +R     P+  TYT +
Sbjct: 577 KIFEFMEE---KGGYRDIVAYNAMIKGYCKSGMMNEAV-MCMSSMRKVGCIPDEFTYTTL 632

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K+  +  A   L  M ++   PN  TY SLI G+C +GN + A  L   M  EG 
Sbjct: 633 IDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGL 692

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS------------- 445
            PN+  Y  +I  L KK +  +A    +         +  T   L++             
Sbjct: 693 FPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSN 752

Query: 446 -EHLKQAETKQA-LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
                QA  K A L +F  ++  GL+P I AY  +I + CR   + ++ +  ++    G 
Sbjct: 753 CSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGC 812

Query: 504 FPTKETYTSMICGY 517
            P   T+ S++ G+
Sbjct: 813 LPDPVTFLSLLYGF 826



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 54/292 (18%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A ++F+ M  +G   D  +Y  M+  YC+ G + EA   +S+M   G I D  T T LI 
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +  KG    IK A   L +M+++  KPN+ T+  LI G C  G T+ A  LF  + +S+
Sbjct: 635 GYAKKG---DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASM-QSE 690

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK--------------------------- 359
              PNV  YT +I    K++K  +A    E M                            
Sbjct: 691 GLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMIN 750

Query: 360 -----------------------EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
                                    GL P  + Y ++I+  C+     +A +L + M  +
Sbjct: 751 SNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNK 810

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           GC P+   + +++ G    G+  +    L   FQ++       Y  LL++H+
Sbjct: 811 GCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEFEIICKYMTLLNQHV 862



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 128/313 (40%), Gaps = 39/313 (12%)

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           R Y  M    +EG   + Y+   ++ GLC +GRV+E   L++  +        + Y +L+
Sbjct: 260 RLYGEMLARDREGGADD-YSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLI 318

Query: 445 SEHLKQAETKQAL-----------------------------------GLFCRMVKAGLN 469
             + ++ +  + L                                    L   M + GL+
Sbjct: 319 DGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLS 378

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++  Y T+I A C+ +   ++     + + +   P   T+ ++I  + R+G++  A+K 
Sbjct: 379 PNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKL 438

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
            +   +    P+ ++Y  LI G C + ++  A      MIG+G +P  VT   L +    
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498

Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            G    A+++ E + ++  +      N LI  LC ++ +  A     ++L +    D+  
Sbjct: 499 SGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFV 558

Query: 647 LAALKNACYESNK 659
              L +    S+K
Sbjct: 559 YTTLIDGFIRSDK 571



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 19/238 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+  + + G + E    +  M   G      T   ++    + G ++ A     +M  R 
Sbjct: 597 MIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRR 656

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  YC +G    A+   ++M   G   +    T+LI +   K       
Sbjct: 657 CKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKD---KAI 713

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGL--CKKGW-------TEKAFR------LFLKLV 323
           QA    E M+     PN  T   L++GL  C+ G        T++A +      +F  L+
Sbjct: 714 QAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLI 773

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
            SD   P +  Y A+I   C+   + +A  L E+M  +G LP+  T+ SL+YG   VG
Sbjct: 774 -SDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVG 830


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 195/384 (50%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + +V   C  G+VE A +V ++M   G  A+ +   +++   C+ GRV +A ++L+ M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C +  R   + A ELL+EMVRK   PN  T    I  LC+K
Sbjct: 347 GSYGCSPDTISYTTVLKGLC-RAERW--EDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A  + ++ +     + N+ TY A+++G+C + +++ A   LE        PNT T
Sbjct: 404 GLIEQA-TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTIT 459

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M ++ C PN+  +N ++   C+KG + EA EL+++  
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + ITY  LL    K   +++AL L   +V  G++PDI  Y+++I    R+ +++
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ K F      G+ P    Y  ++    +  N   A+ +F  M   GC P+ +TY  LI
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L E       +  +G+
Sbjct: 640 EGLANEDFLKETRDLLRELCSRGV 663



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 215/463 (46%), Gaps = 23/463 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     GR+ +    +  +++ G    T +   V+   C     E  EE+F EM  + 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++ ++V  +CR G V  A + L  M   G   +     ++I   C +G    + 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG---RVD 337

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+ L  M   G  P+  ++T ++ GLC+    E A  L  ++VR  N  PN  T+   
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPPNEVTFNTF 396

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++  + +A ML+E+M E G   N  TY +L+ G C  G  + A +L   M    C
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 453

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++ GLC   R+  A ELL +  Q++   + +T+ +L+S   ++    +A+ 
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  P++  Y TL+    +    +E+ +     ++ G+ P   TY+S+I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+  +  A+K F  +  +G  P  + Y  ++  LCK+   D A  F+  M+  G  P E+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           T +TL                +E L  + +++    L+R+LCS
Sbjct: 634 TYITL----------------IEGLANEDFLKETRDLLRELCS 660



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 192/412 (46%), Gaps = 10/412 (2%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA R +     RG   D    T LI   C    RG    A  +L    R G   +V+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCR---RGRTSDAARVLRAAERSGTAVDVFA 115

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+ G C+ G  + A RL    + S    P+ +TYT +I G C   ++  A  LL+ M
Sbjct: 116 YNTLVAGYCRYGQLDAARRL----IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G  P+  TYT L+   CK   F +A +++D M  +GCTPNI  YN II+G+C++GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A E L +      Q D ++YT +L         +    LF  M++    P+   +  L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +  FCR   ++ + +  ++    G          +I    + G +  A ++   M   GC
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           +PD I+Y  ++ GLC+  + ++A +  + M+ K   P EVT  T     C++G    A +
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 599 ILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           ++E + +   ++ I T N L+   C + RV  A   F+ +  K   +   +L
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTL 463



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 222/480 (46%), Gaps = 17/480 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+ +   G+L     ++  M     P+     T   ++   C+ G V  A  + D+M  
Sbjct: 119 LVAGYCRYGQLDAARRLIASM-----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG      +Y +++ A C+     +A   L  M  +G   +  T  ++I   C +   G 
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE---GR 230

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A E L  +   G++P+  ++T ++ GLC     E    LF +++   N  PN  T+ 
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFD 289

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C+   + RA  +LE+M   G   NT     +I   CK G  + A+  ++ MG  
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC+P+  +Y  ++ GLC+  R ++A ELLK+  ++    +++T+   +    ++   +QA
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L  +M + G   +I  Y  L+  FC Q ++  + + F    +    P   TYT+++ G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKPNTITYTTLLTG 466

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
                 + +A +    M Q  CAP+ +T+  L+S  C++  +DEA +  E M+  G +P 
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFH 633
            +T  TL     K  +S  A+ +L  L        I T +++I  L  E RV  A   FH
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 201/436 (46%), Gaps = 13/436 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + D   +RG   D      ++   CR GR ++A R L A    G  +D      L+ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C  G    +  A  L+  M      P+ YT+T +I GLC +G   +A  L   ++   
Sbjct: 122 GYCRYG---QLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 174

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             +P+V TYT ++   CK     +A  +L+ M+ +G  PN  TY  +I G C+ G  + A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            + ++ +   G  P+  +Y  ++ GLC   R ++  EL  +  ++    +++T+ +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++A+ +  +M   G   +      +I   C+Q ++ ++ +F     + G  P 
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +YT+++ G  R      A +  + M +  C P+ +T+   I  LC++  +++A    E
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 567 SMIGKGISPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            M   G   CEV  VT   L   +C QG   +A+ +  S+  K    T  TL+  LC+ +
Sbjct: 415 QMSEHG---CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471

Query: 624 RVGMAALFFHKLLGKD 639
           R+  AA    ++L KD
Sbjct: 472 RLDAAAELLAEMLQKD 487



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 7/313 (2%)

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + +  A  L++R   +G  P+    T LI   C+ G    A  ++    + G   +++AY
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ G C+ G++  A  L+       +  D  TYT ++     +    +AL L   M+ 
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P +  YT L+ A C+     ++ +   E    G  P   TY  +I G  R+G +  
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A ++  R++  G  PD ++Y  ++ GLC   + ++  + +  M+ K   P EVT   L  
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +C+ G    A+ +LE +            N +I  +C + RV  A  F + +     + 
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353

Query: 643 DRVS-LAALKNAC 654
           D +S    LK  C
Sbjct: 354 DTISYTTVLKGLC 366



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 8/255 (3%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN    NA +  L  +  + EA  L+ +A  R    D    T L+    ++  T  A  
Sbjct: 42  SPN--PANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +     ++G   D+ AY TL+A +CR  ++  + +       A   P   TYT +I G  
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLC 156

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A+     M   GC P  +TY  L+  +CK +   +A +  + M  KG +P  V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK-KLWIRTVN--TLIRKLCSEKRVGMAALFFHKL 635
           T   +    C++G    A   L  L        TV+  T+++ LC+ KR       F ++
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 636 LGKDQNVDRVSLAAL 650
           + K+   + V+   L
Sbjct: 277 MEKNCMPNEVTFDML 291



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++      RL     ++ EM          T N +V   C+ GL++ A E+ ++M   G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++    +     EA   L  ++  G   D  T + +I     +       
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F +++++   G +P    +  ++  LCK+  T+ A   F  +V S+   PN  TY  +
Sbjct: 583 KMFHIVQDL---GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV-SNGCMPNELTYITL 638

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I G   E+ +     LL  +  +G+L
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGVL 664



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 1/143 (0%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           RD +++ A +   R    G APD      LI  LC++ +  +A +   +    G +    
Sbjct: 56  RD-DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF 114

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              TL   YC+ G    A  ++ S+       T   +IR LC   RVG A      +L +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 639 DQNVDRVSLAALKNACYESNKYA 661
                 V+   L  A  +S  + 
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFG 197


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 234/516 (45%), Gaps = 42/516 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+P    T + VV   C+   ++ AE    +M  +G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  Y   G+  EA R    M     + D  TL++L+ + C  G    IK
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG---KIK 341

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++ + M  KG  PNV+++T++++G   KG       LF  L+  D   P+++T+  +
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAPDIYTFNVL 400

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y     +++A ++   M++ G+ P+  TY ++I   C++G  + A +  + M  +G 
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ YAY+ +I G C  G + +A EL+ +                               
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISE------------------------------- 489

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               ++  G++ DI  ++++I   C+  ++ +++  F   +  GL PT   Y+ ++ GY 
Sbjct: 490 ----IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A++ F  M   G  P+++ YG L++G CK  ++DE    +  M+ KGI P  +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 605

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
               +     + G +  A +    + +    +   T N ++R L   +    A   F +L
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
              +  ++ ++L  +    +++ +     DL   I+
Sbjct: 666 RAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 205/433 (47%), Gaps = 4/433 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ +A  G L +   +   M  +G+     T N ++      G+++ A  +F+EM   G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y+ ++ A CR+G++ +A    + M+D+G   D      LI  FC     GS+ 
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT---HGSLL 481

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL+ E++  G   ++   + +I+ LCK G    A  +F  L  +    P    Y+ +
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSML 540

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYC   KM +A  + + M   G+ PN   Y +L+ G+CK+G  +    L   M ++G 
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+   YN IIDGL + GR   A     +  +  +  +K TY I+L    K     +A+ 
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LF  +    +  +I    T+IA   + ++++E++  F     +GL P   TY+ MI   +
Sbjct: 661 LFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI 720

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++G +  A   F  M   GC PD+     ++  L K++++  A  +   +  +  S   +
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 780

Query: 579 TRVTLAYEYCKQG 591
           T + L   +  +G
Sbjct: 781 TTMLLVDLFSSKG 793



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 223/479 (46%), Gaps = 28/479 (5%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGI--------ACELGLVEYAEEVFDEMCARG- 218
           R +E   ++ E+   G P++   LN  +          AC  G    A  +F+   +R  
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSG-PALAVALFNRAASRAQ 102

Query: 219 ----VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
               +   + +Y +++    R  R   A  +   +L  G  ++      L+  FC+    
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEA--- 159

Query: 275 GSIKQAFELLEEMVRK----GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY-K 329
              K+  E L+ ++ +    G  P+V+++++L+  LC +G + +A  L   +        
Sbjct: 160 ---KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y+ +I G+ KE  +N+A  L + M ++G+ P+  TY+S+++  CK    ++A   
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M  +G  PN + YN +I G    G+ +EA  + K+  +  +  D +T ++L+    K
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             + K+A  +F  M   G NP++ +YT ++  +  +  + +    F   +  G+ P   T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  +I  Y   G +  A+  F  M   G  PD +TY  +I+ LC+  K+D+A + +  MI
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRV 625
            +G++P +     L   +C  G    A  +I E ++  + +  V  +++I  LC   RV
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 203/483 (42%), Gaps = 39/483 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  EM  + +     TL+ ++G  C+ G ++ A +VFD M  +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  SY +M+  Y   G + +       ML  G   D  T  +LI A+ + G    + 
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM---LD 411

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM   G KP+V T+  +I  LC+ G  + A   F +++      P+ + Y  +
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI-DQGVAPDKYAYHCL 470

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+  +   G                                   L
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P    Y+ L+ G+C VG  E+A  + D M   G  PN   Y  +++G CK GR+ E   
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++  Q+ ++   I Y I++    +   T  A   F  M ++G+  +   Y  ++    
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLF 650

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + +   E+   F+E     +     T  +MI G  +   +  A   F  +++ G  P  +
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVV 710

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I+ L K+  ++EA   + SM   G  P       +  E  K+ +   A   L  +
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 604 DKK 606
           D++
Sbjct: 771 DER 773



 Score = 38.9 bits (89), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 54/117 (46%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  M++   +  R++E   +   ++ +GL     T + ++    + GLVE AE++F  M 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
             G   D+     +V    +   +  A  +LS + +R   L++ T  LL+  F  KG
Sbjct: 737 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 239/516 (46%), Gaps = 20/516 (3%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           + E FS+   M  +G+     TL+ +V   C  G    A  +F EM   GV  +  +Y  
Sbjct: 273 MDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT 332

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK-GFRGSIKQAFELLEEM 287
           ++ +  +  R +E+   L  M+ RG ++D     ++ TA  D+ G  G I++A ++L   
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMD----LVMYTALMDRLGKEGKIEEAKDVLRHA 388

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
                 PN  T+TVL+D  C+ G  + A ++ L++    +  PNV T++++I+G  K   
Sbjct: 389 QSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM-EEKSVIPNVVTFSSIINGLVKRGC 447

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           + +A   + +MK+ G+ PN  TY +LI G  K    E A D+   M  EG   N +  ++
Sbjct: 448 LGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDS 507

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +++GL K G ++ A  L K   +R L  D + YT L+    K      A  +   +++  
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           L+PD   Y   I   C   K  E++ F +E    GL P + TY +MI    R+G  S A+
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT--RVTLAY 585
           K  + M +    P+ ITY  L+ GL +   + +A      M   G +P  +T  RV  A 
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 586 EYCKQGDSATAMIILESLDKKLW------IRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
              ++ D     +ILE  +  +       I   NTL+  LC       A +   ++L + 
Sbjct: 688 SGSRRPD-----VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG 742

Query: 640 QNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
              D ++  AL    C  S+    F+  +Q + +G+
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 213/464 (45%), Gaps = 11/464 (2%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T + N  +    E G    A  V  EMC RGV  D  +    +V  CR G V EA   L+
Sbjct: 115 TVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEA-AALA 173

Query: 248 AMLDRGAILDNATLT---LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
            ML RG  +D   +     LI  +C       +  A  ++E M  +G   +V  +  L+ 
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQ---DMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G    G  + A  +  ++ ++D  +PNV TYTA+I  YCK + M+ A  L E M   G+L
Sbjct: 231 GFFHSGDADAALEVVERM-KADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  T ++L+ G C+ G F  AY L   M K G  PN   Y  +ID L K  R  E+  L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L +   R +  D + YT L+    K+ + ++A  +        + P+   YT L+ A CR
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
              +  +E+   +     + P   T++S+I G ++ G +  A  Y ++M   G AP+ +T
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           YG LI G  K    + A   Y  M+ +G+        +L     K G+   A  + + +D
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 605 KK-LWIRTVN--TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           ++ L +  VN  TL+  L     +  A     +L+ K+ + D V
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAV 573



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 9/459 (1%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V AD  SY + + A    G    A   LS M  RG   D  T++  +   C  G  G   
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVG--- 167

Query: 279 QAFELLEEMVR-KGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +A  L E +VR +G    +V     LIDG CK      A  +  ++  +     +V  Y 
Sbjct: 168 EAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMT-TQGVALDVVGYN 226

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++++G+      + A  ++ERMK  G+ PN  TYT+LI  +CK    + A+ L + M + 
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS 286

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++   +A++DGLC+ G+  EAY L ++  +  +  + +TY  L+    K     ++
Sbjct: 287 GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           LGL   MV  G+  D+  YT L+    ++ K++E++   + A +  + P   TYT ++  
Sbjct: 347 LGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + R GNI  A +   +M +    P+ +T+ ++I+GL K+  L +A  +   M   GI+P 
Sbjct: 407 HCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPN 466

Query: 577 EVTRVTLAYEYCK-QGDSATAMIILESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFH 633
            VT  TL   + K QG  A   +  + L + +      V++L+  L     +  A   F 
Sbjct: 467 VVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFK 526

Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
            +  +   +D V+   L +  +++        + Q + E
Sbjct: 527 DMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 203/449 (45%), Gaps = 39/449 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  +V+   + G ++   ++  +M   GL L       ++    + G +  A +V  E+
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             + +  DA  Y + +   C +G+ +EA  +L  M + G   D AT   +I A C +G  
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREG-- 621

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP---- 330
               +A +LL+EM R   KPN+ T+T L+ GL + G  +KA +  L  + S  + P    
Sbjct: 622 -KTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA-KFLLNEMASAGFAPTSLT 679

Query: 331 -------------------------------NVHTYTAMISGYCKEEKMNRAEMLLERMK 359
                                          ++  Y  ++   C       A ++L+ M 
Sbjct: 680 HQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML 739

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+ P+T T+ +LI GHCK  + + A+ +   M  +G +PNI  +N ++ GL   GR+ 
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L    +  L+ + +TY IL++ + K++   +AL L+C MV  G  P    Y +L+
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLM 859

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + F +   M ++++ F E    G+  T  TY  ++ G+ +  N        + M ++G  
Sbjct: 860 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFK 919

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESM 568
           P   T  ++     +     EA +  +++
Sbjct: 920 PSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 14/415 (3%)

Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
           E A +V+ +M   GV A+      +V    + G +  A+     M +RG +LD+   T L
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 265 ITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +    D  F+ G++  AF++ +E++ K   P+   + V I+ LC  G   +A + FLK +
Sbjct: 544 M----DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEA-KSFLKEM 598

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           R+   +P+  TY  MI+  C+E K ++A  LL+ MK   + PN  TYT+L+ G  + G  
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR----VQEAYELLKKAFQRELQADKIT 439
           ++A  L++ M   G  P    +  ++   C   R    + E +EL+  A    L AD   
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGA---GLHADITV 714

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L+         + A  +   M+  G+ PD   +  LI   C+   +  +   + + +
Sbjct: 715 YNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQML 774

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             GL P   T+ +++ G    G I  A      M ++G  P+N+TY  L++G  K+S   
Sbjct: 775 HQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKV 834

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           EA + Y  M+ KG  P   T  +L  ++ K G    A  +   + ++  + T +T
Sbjct: 835 EALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSST 889



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/543 (22%), Positives = 223/543 (41%), Gaps = 82/543 (15%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG----LPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++ S A+  R  E   ++ EM + G    L + T+ ++R+     + G +E A++V    
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL----GKEGKIEEAKDVLRHA 388

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            +  +  +  +Y ++V A+CR G +  A++ L  M ++  I +  T + +I        R
Sbjct: 389 QSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVK---R 445

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A + + +M   G  PNV T+  LIDG  K    E A  ++  ++  +  + N   
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLH-EGVEANNFV 504

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH----------------- 377
             ++++G  K   +  AE L + M E+GLL +   YT+L+ G                  
Sbjct: 505 VDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELM 564

Query: 378 ------------------CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
                             C +G F  A   +  M   G  P+   YN +I   C++G+  
Sbjct: 565 EKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTS 624

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP--------- 470
           +A +LLK+  +  ++ + ITYT L+   L+    K+A  L   M  AG  P         
Sbjct: 625 KALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVL 684

Query: 471 --------------------------DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
                                     DI  Y TL+   C     + +     E +T G+ 
Sbjct: 685 QACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIA 744

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T+ ++I G+ +  ++ +A   + +M   G +P+  T+  L+ GL    ++ EA   
Sbjct: 745 PDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 804

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKR 624
              M   G+ P  +T   L   Y K+ +   A+ +   +  K +I   +T    +    +
Sbjct: 805 LSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAK 864

Query: 625 VGM 627
            GM
Sbjct: 865 AGM 867



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 169/445 (37%), Gaps = 56/445 (12%)

Query: 143 LISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           L  NGN E A  + + M               +    + G +   F +  E+    L   
Sbjct: 512 LRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPD 571

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
               N  +   C LG    A+    EM   G+  D ++Y  M+ A CR G+ ++A + L 
Sbjct: 572 AVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLK 631

Query: 248 AMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH------- 299
            M  R +I  N  T T L+    + G    +K+A  LL EM   G+ P   TH       
Sbjct: 632 EM-KRNSIKPNLITYTTLVVGLLEAGV---VKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 300 ----------------------------TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                                         L+  LC  G    A  + L  + +    P+
Sbjct: 688 SGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNA-TVVLDEMLTRGIAPD 746

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
             T+ A+I G+CK   ++ A  +  +M  QGL PN  T+ +L+ G    G    A  ++ 
Sbjct: 747 TITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS 806

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M K G  PN   Y+ ++ G  KK    EA  L  +   +       TY  L+S+  K  
Sbjct: 807 DMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAG 866

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              QA  LF  M + G+      Y  L+  + + +   E     ++    G  P+K T +
Sbjct: 867 MMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTIS 926

Query: 512 SMICGYLRDGNISSAVKYFQRMNQI 536
           SM   + R G    A +  + + ++
Sbjct: 927 SMSRAFSRPGMTGEARRLLKTLFKV 951


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 230/476 (48%), Gaps = 12/476 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V  A  VF+EM ARG     +++  M++ +C  G V  A   L  M + G + +  + 
Sbjct: 198 GEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSY 257

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI   C  G+    + AF+L EEM R G +P V T+ +L+D LC +G   +A RLF +
Sbjct: 258 NILIKGHCVFGWS---RDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 314

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + +    + N  T+  +I GY K  +M++A      MK +GL+P++ T+  +  G  K G
Sbjct: 315 MAQV-GIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFG 373

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           +  +     D+ G       +   + ++  LC   R+ +A+ELL+ A ++        + 
Sbjct: 374 HAAQLVHDHDMFGSHMLADGM---DMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFN 430

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L++ + K+   ++A  L+  M K GL P    +  LI   C Q ++ E++   +  ++ 
Sbjct: 431 ALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 490

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G +    ++T  +    R+GN   A+K +  M ++G  PD I + A I+GLC+   ++EA
Sbjct: 491 G-YCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEA 549

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRK 618
            Q +  M  +GI P   T  ++    C+ G+   A+ + +++ +      I T N LI  
Sbjct: 550 YQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDG 609

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
           LC E ++ M       +       D V+   + NA C   +  +  + +++ +A G
Sbjct: 610 LCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAG 665



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 227/508 (44%), Gaps = 36/508 (7%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  ++ F +  EM  +G      T N +V + C  G +  A  +FDEM   G+ A+  ++
Sbjct: 268 GWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITF 327

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA----------FCDKGFRGS 276
            +++  Y + GR+ +A      M  RG + D+ T  ++               D    GS
Sbjct: 328 NVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGS 387

Query: 277 -------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
                              +  A+ELL   + +G   +V     LI    K+G  E+AF 
Sbjct: 388 HMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFE 447

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L+ +++      P+  T+  +I G C + +++ A++LLE M  +G   +T ++T  +   
Sbjct: 448 LY-RIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAS 505

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            + GN   A    D MGK G  P+  A++A I+GLC+   V EAY+   +   R +  + 
Sbjct: 506 FREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNN 565

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            TY  ++S   +     +AL L   M + GL PDI+    LI   CR+ K++  +    +
Sbjct: 566 FTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLD 625

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + GL P   TY ++I  Y R  +++SA+ +  +M   GC PD  TY   +  LC    
Sbjct: 626 MCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHM 685

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
           L++A +  + ++  G  P  VT  TL    C       AMI+   L K  +     T+N 
Sbjct: 686 LNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLD-RAMILTGRLIKMAFQPNTITLNV 744

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +   C +   G  AL + + L +D  V
Sbjct: 745 FLSHFCKQG-FGKRALMWAEKLREDSFV 771



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 36/364 (9%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A ++L  + R G  P++     L+  L + G    A+ +F ++  +   +P++ T
Sbjct: 163 GMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMA-ARGPRPSLAT 221

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           + AMI G+C    +  A  LL  M E G++PN  +Y  LI GHC  G    A+ L + M 
Sbjct: 222 FNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMH 281

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P +  YN ++D LC +GR+ EA  L  +  Q  +QA+ IT+ +L+  + K     
Sbjct: 282 RSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMD 341

Query: 455 QALGLFCRMVKAGLNPD--------------------IHAY------------TTLIAAF 482
           QA   +  M   GL PD                    +H +              L+   
Sbjct: 342 QACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRL 401

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   ++ ++ +  + AI  G   +   + ++I  Y ++G    A + ++ MN++G AP +
Sbjct: 402 CWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSS 461

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC-KQGDSATAMIILE 601
            T+  LI GLC Q +LDEA    E M+ KG   C  T  T+  +   ++G++  A+   +
Sbjct: 462 STFNYLIMGLCNQGRLDEAQLLLEHMVSKGY--CLSTSFTICLDASFREGNAVCALKCWD 519

Query: 602 SLDK 605
            + K
Sbjct: 520 DMGK 523



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 72/353 (20%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++++ G  +E F +   M   GL   +ST N ++   C  G ++ A+ + + M ++G
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491

Query: 219 --------VCADAS--------------------------SYKLMVVAYCRMGRVTEADR 244
                   +C DAS                          ++   +   CR+  V EA +
Sbjct: 492 YCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQ 551

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
             + M  RG + +N T   +I+A C  G   ++ +A +L + M + G  P++YT  +LID
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAG---NMTEALKLQQNMRQNGLVPDIYTSNILID 608

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC++G  E    L L +  S+   P+  TY  +I+ YC+ + MN A   + +M   G  
Sbjct: 609 GLCREGKLEMVDNLLLDMC-SNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCE 667

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------- 411
           P+  TY   ++  C      +A  ++D +   GC P+   YN ++DG             
Sbjct: 668 PDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILT 727

Query: 412 ---------------------LCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
                                 CK+G  + A    +K  +     D  T  I+
Sbjct: 728 GRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDATRNII 780



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L R++  G  P+ +   +L+    + G    A+++ + M   G  P++  +NA+I G C
Sbjct: 171 VLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFC 230

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
            +G V                                   + A GL   M + G+ P++ 
Sbjct: 231 HRGLV-----------------------------------RVASGLLGIMGEFGIVPNVC 255

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           +Y  LI   C     +++ K F+E   +G  PT  TY  ++     +G +  A + F  M
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            Q+G   + IT+  LI G  K  ++D+AC  Y  M  +G+ P   T   +A    K G +
Sbjct: 316 AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHA 375

Query: 594 ATAMIILESLDKKLWIRTVNTLIRKLCSEKRV 625
           A  +   +     +    ++ L+ +LC + R+
Sbjct: 376 AQLVHDHDMFGSHMLADGMDMLVCRLCWDCRL 407


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 217/484 (44%), Gaps = 19/484 (3%)

Query: 125 GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL 184
           G  KF  F     V    + S G F     V   ++  ++  G + +   +  +MT  GL
Sbjct: 320 GLVKFEKFDEANSVLV-EMYSKG-FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL 377

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR--GVCADASSYKLMVVAYCRMGRVTEA 242
                T N ++   C    +E AE+V + + +    V  DA SY L ++  C+  +   A
Sbjct: 378 KPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL--CKSSKFDSA 435

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKG-FRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
            + + A+L R   ++++ LTLL+   C  G    +I   F L +   +KG   N  T   
Sbjct: 436 LKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLAD---KKGLAANTTTSNA 492

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+ GLC++G  E+ F +  ++V        + +Y  +I G CK  K+  A  L E+M +Q
Sbjct: 493 LLYGLCERGNMEEVFPVCKEMVERGLVLDGI-SYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G  P+T TY  L+ G    G  +    ++      G  PNIY Y  +++G C   R+  A
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 611

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L  K    +++   + Y IL++ H K     +A  L   M  + ++P I  Y+++I  
Sbjct: 612 VSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHG 671

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C    ++E++  F+E    GL P    YT++I GY + G +       Q M      P+
Sbjct: 672 MCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPN 731

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--------QGDS 593
            ITY  +I G CK     EA +    MI  GISP  VT   L   YCK        QGD+
Sbjct: 732 KITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDT 791

Query: 594 ATAM 597
           A  +
Sbjct: 792 AVPL 795



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 149/635 (23%), Positives = 235/635 (37%), Gaps = 152/635 (23%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMV--------------- 160
            L FF +A    KFR  +R Y +    L+++ +  RA   ++ ++               
Sbjct: 94  TLDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARL 153

Query: 161 ----SSFAEIGRLKEG---------------------FSMVIEMTNNGLPLITSTLNRVV 195
               S+F E+G    G                     F   +  T+ G+     + N ++
Sbjct: 154 SEIASAFLELGERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLM 213

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
               +   +  +  VFD MC  GV  D  +Y   + AYC+ G++ EA      M + G +
Sbjct: 214 SSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVL 273

Query: 256 LDNATLTLLITAFCDKG-------FRGSI-------------------------KQAFEL 283
            +  T   LI   C  G       F+G +                          +A  +
Sbjct: 274 PNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSV 333

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD----NYKPNVHTYTAMI 339
           L EM  KG+ PN +    LIDG  +KG  + A R     VR D      KPN  T+  ++
Sbjct: 334 LVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALR-----VRDDMTLKGLKPNAVTHNTLL 388

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNT------------------------------ 369
            G+C+  +M +AE +LE +    L  N +                               
Sbjct: 389 QGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIK 448

Query: 370 -----YTSLIYGHCKVGNFERAYDL-MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                 T L+ G CK G    A DL   L  K+G   N    NA++ GLC++G ++E + 
Sbjct: 449 VNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFP 508

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           + K+  +R L  D I+Y  L+    K  + ++A  L  +M+K G  PD + Y  L+    
Sbjct: 509 VCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLA 568

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR----------- 532
            + KM +  +   EA   G+ P   TY  M+ GY     I +AV  F +           
Sbjct: 569 DKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYV 628

Query: 533 ------------------------MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
                                   M      P   TY ++I G+C    ++EA   +E M
Sbjct: 629 VYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEM 688

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             +G+ P       L   YCK G       IL+ +
Sbjct: 689 RNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEM 723



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 32/365 (8%)

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
           W    F LF     S    P++ +   ++S   K  +++++  + + M   G+L +  TY
Sbjct: 189 WAFDTFMLF----TSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTY 244

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            + I  +CK G  + A  L   MG+ G  PN+  YN +IDGLCK GR++EA     +  +
Sbjct: 245 ATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVE 304

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            ++    +TY IL++  +K  +  +A  +   M   G +P+   +  LI  + R+  M +
Sbjct: 305 NKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDD 364

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--NQIGCAPDNITYGAL 548
           + +   +    GL P   T+ +++ G+ R   +  A +  + +  N +    D  +Y  +
Sbjct: 365 ALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--V 422

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           +  LCK SK D A +  ++++ + I   +     L    CK G        LE++D  LW
Sbjct: 423 LHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKH------LEAID--LW 474

Query: 609 IR------------TVNTLIRKLCSEKRVGMAALF--FHKLLGKDQNVDRVSLAALKNAC 654
            R            T N L+  LC  +R  M  +F    +++ +   +D +S   L   C
Sbjct: 475 FRLADKKGLAANTTTSNALLYGLC--ERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGC 532

Query: 655 YESNK 659
            +S K
Sbjct: 533 CKSGK 537



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 7/298 (2%)

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
           F  A+D   L   +G  P++ + N ++  L K   + +++ +     +  +  D  TY  
Sbjct: 187 FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYAT 246

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
            ++ + K  +  +A+GLF +M + G+ P++  Y  LI   C+  +++E+  F    +   
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK 306

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P+  TY  ++ G ++      A      M   G +P+   + ALI G  ++  +D+A 
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 366

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT-----LIR 617
           +  + M  KG+ P  VT  TL   +C+      A  +LE L     + +VN      ++ 
Sbjct: 367 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSN--VLSVNEDACSYVLH 424

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
            LC   +   A      LL ++  V+   L  L     +  K+    DL  R+A+  G
Sbjct: 425 LLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKG 482


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 5/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G ++ AE V+ EM    V  DA  Y  M+  + R GR+ +    L  ++ R    + 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIE-LWELMGREDSQNV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +  +++      G    + +A  + E M + G+  +  T+ +L+DG CK G+  K+ R+
Sbjct: 60  VSFNIMMRGLFGNG---DVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L +        +   Y+AMI+G CKE K++ A  +L  M + G  PN + Y +LI G  
Sbjct: 117 -LGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFV 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            V  F+ A  +   MG   C+P +  YN +I+GLCK  R  EAY+L+K+  ++  +   I
Sbjct: 176 GVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+    +  + + AL L+ +++  GL PD+     LI   C   K + +   + + 
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM 295

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ +++ G+ +DG+I +A+  + R+ + G  PD ++Y   + GLC  S++
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRI 355

Query: 559 DEACQFYESMIGKGISP 575
             A  F +  + K I+P
Sbjct: 356 SFAILFLQDALAKKIAP 372



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 4/305 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V+ A  +++ M   G   D+++Y ++V  +C+ G + ++ R L    ++G +LD    
Sbjct: 73  GDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAY 132

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
           + +I   C +     + +A  +L  M++ G  PN + +  LI+G       + A R+F +
Sbjct: 133 SAMINGLCKEA---KLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFRE 189

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +  S N  P V TY  +I+G CK E+   A  L++ M E+G  P   TY+ L+ G C+  
Sbjct: 190 M-GSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGH 248

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             E A  L + +   G  P++   N +I GLC  G+ Q A  L     +     + +T+ 
Sbjct: 249 KVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHN 308

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+    K  + + ALG++ R+++ GL PDI +Y   +   C   ++  +  F Q+A+  
Sbjct: 309 TLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAK 368

Query: 502 GLFPT 506
            + P+
Sbjct: 369 KIAPS 373



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 166/367 (45%), Gaps = 5/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  + +EM      P+   +  +++G  + G  +    L+  + R D+   NV +
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDS--QNVVS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G      +++A  + E M + G + ++ TY  L+ G CK G   ++  ++ +  
Sbjct: 62  FNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   + +AY+A+I+GLCK+ ++ EA  +L    +     +   Y  L++  +  ++  
Sbjct: 122 EKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFD 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ +F  M     +P +  Y TLI   C+ ++  E+    +E +  G  P   TY+ ++
Sbjct: 182 DAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLM 241

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +   +  A++ + ++   G  PD      LI GLC   K   A   Y  M     +
Sbjct: 242 KGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCA 301

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   + K GD   A+ I   + +      I + N  ++ LCS  R+  A LF
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILF 361

Query: 632 FHKLLGK 638
               L K
Sbjct: 362 LQDALAK 368



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 33/261 (12%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  +   M +   +P+   YNA+++G  + GR+++  EL +    RE   + 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWE-LMGREDSQNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +++ I++       +  +A+ ++  M ++G   D   Y  L+  FC+   + +S +    
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  ++  +  AV     M + G  P+   Y  LI+G    SK
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            D+A + +  M     SP  VT                                 NTLI 
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVT--------------------------------YNTLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
            LC  +R   A     ++L K
Sbjct: 208 GLCKGERFAEAYDLVKEMLEK 228


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 204/438 (46%), Gaps = 11/438 (2%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAML--DRGAILDNA-TLTLLITAFCDKGFRGSIK 278
           DA SY  ++ A CR G    A   L AM      A   NA + T+L+ A C         
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRL---AD 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  LL  M   G + +V T+  LI GLC     +KA  L  ++  S   +PNV  Y+++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES-GIEPNVVVYSSL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYCK  +      +   M E+G+ P+   YT LI   CKVG  ++A+ +MD+M + G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN +I+ +CK+G V+EA  +LKK  ++ +  D +TY  L+       E  +A+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 459 LFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L   MV+    + P++  + ++I   C   +M+++ +        G      TY  +I G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            LR   +  A++    M  +G  PD+ TY  LI G CK  ++D A     +M  +GI P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
               + L    C+QG    A  +   +D    +  V  +T+I   C    +  A      
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 635 LLGKDQNVDRVSLAALKN 652
           ++ +    D V+ + + N
Sbjct: 492 IVDEGLTPDAVTYSIVIN 509



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 194/397 (48%), Gaps = 9/397 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   V+ A E+  EMC  G+  +   Y  ++  YC+ GR  +  +    M ++G   D 
Sbjct: 161 CDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDV 220

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              T LI + C  G     K+A  +++ MVR+G +PNV T+ VLI+ +CK+G  ++A  +
Sbjct: 221 VMYTGLIDSLCKVG---KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYG 376
            LK +      P+V TY  +I G     +M+ A  LLE M   +  + PN  T+ S+I G
Sbjct: 278 -LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C +G   +A+ +  +M + GC  N+  YN +I GL +  +V++A EL+ +     L+ D
Sbjct: 337 LCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY+IL+    K  +  +A  L   M   G+ P++  Y  L+ A C Q  M+ +   F 
Sbjct: 397 SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN 456

Query: 497 EAITAGLFPTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           E      FP     Y++MI G  + G++ +A +  + +   G  PD +TY  +I+   K 
Sbjct: 457 EMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
             ++ A    + M   G  P      +L   Y  +G+
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGE 551



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 200/434 (46%), Gaps = 12/434 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  + + GR ++   + +EM+  G+         ++   C++G  + A  V D M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +  +Y +++   C+ G V EA   L  M ++G   D  T   LI    D    
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV--- 303

Query: 275 GSIKQAFELLEEMVRKG--WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             + +A  LLEEMVR     KPNV T   +I GLC  G   +AF++   ++       N+
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR-AMMEETGCMVNL 362

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G  +  K+ +A  L++ M   GL P++ TY+ LI G CK+   +RA DL+  
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P ++ Y  ++  +C++G ++ A  L  +        D + Y+ ++    K  +
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGD 481

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            K A  L   +V  GL PD   Y+ +I  F +   M+ +    ++   +G  P    + S
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK---LDEACQFYESMI 569
           +I GY   G I+  ++  + M     A D+     L + L   ++   L ++   + + I
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEI 601

Query: 570 GKG--ISPCEVTRV 581
            KG   SP E+ +V
Sbjct: 602 SKGNINSPQELMKV 615


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 204/445 (45%), Gaps = 39/445 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G + +   +  EM   G+    ST N VV   C+   ++ AE +  +M  +G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++  Y   G+  EA R    M  +G + D  TL  L+ + C     G IK
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK---HGKIK 338

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ + M  KG K +++++ ++++G   KG       LF  L+ SD   P+ H +  +
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF-NLMLSDGIAPDSHIFNVL 397

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE-------------- 384
           I  Y K   ++RA ++   M+EQG+ P+  TY+++I   C++G  +              
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457

Query: 385 ---------------------RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
                                +A DL+  M  +G  P+I  +N II+ LCK GRV +A  
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +        L  + + Y  L+  +    + + AL +F  MV AG+ P++  Y TL+  +C
Sbjct: 518 IFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYC 577

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ E    F+E +  G+ P+   Y  ++ G  + G    A   F  M + G A D  
Sbjct: 578 KVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRY 637

Query: 544 TYGALISGLCKQSKLDEACQFYESM 568
           TY  ++ GL K S  DEA   ++ +
Sbjct: 638 TYSIVLGGLFKNSCSDEAILLFKEL 662



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 223/477 (46%), Gaps = 15/477 (3%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V  A ++F+EM  RG+  D S+Y  +V A C+   + +A+  L  M+D+G + DN T 
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LI  +   G     K+A  + ++M  +G  P+V T   L+  LCK G  + A  +F  
Sbjct: 290 NSLIYGYSSTG---QWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +      K ++ +Y  M++GY  +  +     L   M   G+ P+++ +  LI  + K G
Sbjct: 347 MAMKGQ-KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             +RA  + + M ++G  P++  Y+ +I  LC+ G++ +A E   +   + +     TY 
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+       +  +A  L  +M+  G+ PDI  +  +I   C+  ++ +++  F   I+ 
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           GL P    Y +++ GY   G + +A++ F  M   G  P+ + YG L++G CK  ++DE 
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE-------SLDKKLWIRTVNT 614
              +  ++ KGI P       + +   + G +  A +          ++D+  +   +  
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
           L +  CS++    A L F +L   +  +D  +L  +    ++  +     DL   I+
Sbjct: 646 LFKNSCSDE----AILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASIS 698



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 219/467 (46%), Gaps = 10/467 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCARGVCADASSYKLMVVAYCRM 236
           ++   GL + T  ++ ++   CE      A ++    M   G   D  SY +++ + C  
Sbjct: 133 QVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSD 192

Query: 237 GRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKP 294
            +  +AD  L  M + GA+ L NA   +      D  F+ G + +A +L  EMV++G  P
Sbjct: 193 RKSGQADELLRMMAEGGAVCLPNA---VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISP 249

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           ++ T+  +++ LCK    +KA  +  ++V      P+  TY ++I GY    +   A  +
Sbjct: 250 DLSTYNCVVNALCKARAMDKAEAILRQMV-DKGVLPDNWTYNSLIYGYSSTGQWKEAVRV 308

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            ++M  QG+LP+  T  SL+   CK G  + A D+ D M  +G   +I++Y  +++G   
Sbjct: 309 SKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT 368

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG + +  EL        +  D   + +L+  + K     +A  +F  M + G+ PD+  
Sbjct: 369 KGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVT 428

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+T+IAA CR  KM ++ + F + I  G+ P+  TY  +I G+   G++  A     +M 
Sbjct: 429 YSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  PD   +  +I+ LCK  ++ +A   ++  I  G+ P  +   TL   YC  G   
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548

Query: 595 TAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            A+ + +   S   +  +    TL+   C   R+      F ++L K
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 199/441 (45%), Gaps = 24/441 (5%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFC 269
           F ++   G+  D      ++   C   R  EA D  L  M   G + D  +  +++ + C
Sbjct: 131 FGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC 190

Query: 270 DKGFRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
                G   QA ELL  M   G    PN   +  +IDG  K+G   KA  LF ++V+   
Sbjct: 191 SDRKSG---QADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQR-G 246

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P++ TY  +++  CK   M++AE +L +M ++G+LP+  TY SLIYG+   G ++ A 
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            +   M  +G  P++   N+++  LCK G++++A ++      +  + D  +Y I+L+ +
Sbjct: 307 RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             +        LF  M+  G+ PD H +  LI A+ +   +  +   F E    G+ P  
Sbjct: 367 ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDV 426

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY+++I    R G +  AV+ F +M   G AP   TY  LI G C    L +A      
Sbjct: 427 VTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKR 624
           M+ KG+ P       +    CK G    A  I +   S+     +   NTL+   C    
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYC---- 542

Query: 625 VGMAALFFHKLLGKDQNVDRV 645
                     L+GK +N  RV
Sbjct: 543 ----------LVGKMENALRV 553



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 198/449 (44%), Gaps = 39/449 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+ KE   +  +MT+ G+     TLN ++   C+ G ++ A +VFD M  +G
Sbjct: 292 LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG 351

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SYK+M+  Y   G + +     + ML  G   D+    +LI A+   G    + 
Sbjct: 352 QKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM---LD 408

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  EM  +G +P+V T++ +I  LC+ G  + A   F +++      P++ TY  +
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI-DQGVAPSISTYHFL 467

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG-----------------------------------L 363
           I G+C    + +A+ L+ +M  +G                                   L
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   Y +L+ G+C VG  E A  + D+M   G  PN+  Y  +++G CK GR+ E   
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L ++   + ++     Y I+L    +   T  A   F  M ++G+  D + Y+ ++    
Sbjct: 588 LFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLF 647

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +     E+   F+E     +     T   MI G  +   +  A   F  +++ G  P  +
Sbjct: 648 KNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVV 707

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKG 572
           TY  +++ L K+  ++EA   + SM   G
Sbjct: 708 TYSIMMTNLIKEGLVEEADDMFSSMENAG 736



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 190/419 (45%), Gaps = 11/419 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++S+G    +H +   ++ ++A+ G L     +  EM   G+     T + V+   C +G
Sbjct: 382 MLSDGIAPDSH-IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            ++ A E F++M  +GV    S+Y  ++  +C  G + +A   +  M+++G   D     
Sbjct: 441 KMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFN 500

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I   C     G +  A  + +  +  G  PNV  +  L+DG C  G  E A R+F  +
Sbjct: 501 FIINNLCK---LGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVM 557

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V S   +PNV  Y  +++GYCK  +++    L   +  +G+ P+T  Y  +++G  + G 
Sbjct: 558 V-SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A      M + G   + Y Y+ ++ GL K     EA  L K+     ++ D  T  I
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +++   +    ++A  LF  + ++GL P +  Y+ ++    ++  ++E++  F     AG
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736

Query: 503 L-FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS-----GLCKQ 555
              P  +    ++   L    I  A  Y  ++++   + D+ T   LI      G C++
Sbjct: 737 CEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCRE 795



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 10/193 (5%)

Query: 456 ALGLFCRMVKAG----LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           A+ LF R+ +A     L+P +H Y  L+    R  + K +  FF + +  GL       +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 512 SMICGYLRDGNISSAVK-YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +++ G       + A+     RM  +GC PD  +Y  ++  LC   K  +A +    M  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 571 KGIS--PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
            G    P  V   T+   + K+GD   A  +   + ++     + T N ++  LC  + +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267

Query: 626 GMAALFFHKLLGK 638
             A     +++ K
Sbjct: 268 DKAEAILRQMVDK 280


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 7/382 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILD 257
           CE G +  AE V+ EM    +  DA  Y  M+  + + GR+    D W   ++ R    +
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLW--ELMGREGSRN 58

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
            A+   ++    +    G + + F + E M   G+  +  T+ +L+ G CK G+  K+  
Sbjct: 59  VASFNTMMRGLFN---NGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLH 115

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           + L++ + +    +   Y+AMISG CK  K+++A  +L  M E G  PNT  Y +LI G 
Sbjct: 116 V-LEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGL 174

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
                FE A  +   +G   C+P I  YN +I+GLCK  R  EAY+L+K+  ++      
Sbjct: 175 LGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSV 234

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY++L+    +  + + AL L+ +++  G  PD+  +  LI   C   K + + + + +
Sbjct: 235 ITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFD 294

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
                  P   TY +++ G+ + G+  +A+  + R+ + G  PD I+Y   + GLC  ++
Sbjct: 295 MNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNR 354

Query: 558 LDEACQFYESMIGKGISPCEVT 579
           +  A  F    + K I P  +T
Sbjct: 355 ISVAILFLNDAVTKNIVPTVIT 376



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 4/220 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S   ++G+L +  S++  M  +G    T   N ++         E A  VF E+  R 
Sbjct: 135 MISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRH 194

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++   C+  R  EA   +  ML++G      T +LLI   C       ++
Sbjct: 195 CSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQD---HKVE 251

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L  +++ KG+KP+V  H +LI GLC  G TE A  L+  +    N  PN+ TY  +
Sbjct: 252 MALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDM-NHWNCAPNLVTYNTL 310

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + G+ K      A ++  R+   GLLP+  +Y   + G C
Sbjct: 311 MEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLC 350



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 34/297 (11%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G    A  +   M +   +P+   YNA+++G  K GR++  ++L +    RE   + 
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWE-LMGREGSRNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            ++  ++       E  +   ++  M ++G   D   Y  L+  FC+     +S    + 
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  + G +  AV     M + GC P+   Y ALI+GL   SK
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            ++A + ++ +  +  SP                                 I T NTLI 
Sbjct: 180 FEDAIRVFKELGTRHCSPT--------------------------------IVTYNTLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEG 673
            LC  +R   A     ++L K  N   ++ + L K  C +          +Q I++G
Sbjct: 208 GLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKG 264


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 195/382 (51%), Gaps = 7/382 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILD 257
           CE G ++ A+ V+ EM    V  DA  Y  M++ + R+GR+ +  D W   ++ R    +
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLW--ELMGRKGSQN 58

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             +  +++    D    G + +A  + E M + G+  +  T+ ++IDG CK G+  K+  
Sbjct: 59  VVSFNIMMRGLFD---NGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLH 115

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           + L++        +   Y+AMI+G CKE K+++A  +L  M + G  PN + Y +LI G 
Sbjct: 116 V-LEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGF 174

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
                F+ A  +   MG   C+P I  Y+ +I+GLCK  R  EAY+L+K+  ++  +   
Sbjct: 175 VGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCV 234

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY++L+    +  + + AL L+ +++  G  PD+  +  LI   C   K + +   + +
Sbjct: 235 ITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFD 294

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
                  P   T+ +++ G+ +DG+I +A+  + R+ + G  PD I+Y   + GLC  ++
Sbjct: 295 MNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNR 354

Query: 558 LDEACQFYESMIGKGISPCEVT 579
           +  A  F    + K I P  +T
Sbjct: 355 ISFAILFLHDALTKKIFPTIIT 376



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 170/367 (46%), Gaps = 5/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  +  EM      P+   +  ++ G  + G  +  F L+  + R  +   NV +
Sbjct: 4   GDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGS--QNVVS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G     ++++A  + E MK+ G + ++ TY  +I G CK G   ++  ++++  
Sbjct: 62  FNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G   + +AY+A+I+GLCK+ ++ +A  +L    +   + +   Y  L++  +  ++  
Sbjct: 122 GKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFD 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ +F  M     +P I  Y TLI   C+ ++  E+    +E +  G  P   TY+ ++
Sbjct: 182 DAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLM 241

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +   +  A++ + ++   G  PD   +  LI GLC   K   A   Y  M     +
Sbjct: 242 KGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCA 301

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   + K GD   A++I   + +      I + N  ++ LCS  R+  A LF
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILF 361

Query: 632 FHKLLGK 638
            H  L K
Sbjct: 362 LHDALTK 368



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  +   M +   +P+   YNA++ G  + GR+++ ++L +    R+   + 
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWE-LMGRKGSQNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +++ I++       E  +A+ ++  M K+G   D   Y  +I  FC+   + +S    + 
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  ++  +  AV     M + GC P+   Y  LI+G    SK
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            D+A + +  M     SP                                 I T +TLI 
Sbjct: 180 FDDAIRVFREMGSMDCSPT--------------------------------IVTYHTLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGK 638
            LC  +R   A     ++L K
Sbjct: 208 GLCKGERFSEAYDLVKEMLEK 228


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 197/450 (43%), Gaps = 62/450 (13%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR--- 274
           G   D  +Y  ++  YC+ G+V EA   +  + +    +D  +   L   FC +  +   
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 275 ----------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                       G +   ++  +EM + G  PN+   T LIDG 
Sbjct: 62  FIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGY 121

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K G  + A++L+  + +S  + PNV+TY A+I+G+CK   + RAE    +M E G++PN
Sbjct: 122 SKIGNLDFAYQLYKDMCKS-MHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           +  YTS+I GH K GN + A      M KE    +I AY  +I GL   GR+ +  E+++
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVME 240

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD--------------- 471
              +  L  DK+  T L+  H K   TK A G++  ++  G  PD               
Sbjct: 241 DMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDG 300

Query: 472 -IH--------------AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             H              +YT LI   C++  + E E+   E   +G  P K  YTS I  
Sbjct: 301 RYHDAKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAE 360

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R G I  A K   +M + G   D +TY +LI GL  +  + EA Q ++ M+ +GI P 
Sbjct: 361 LCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPD 420

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +    L   Y KQ +      + E + ++
Sbjct: 421 SMVFDILIRGYLKQDNPVAISHLHEEMRRR 450



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 200/429 (46%), Gaps = 27/429 (6%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G++ D  T   LI  +C     G +++A   ++ +     + ++ +   L +G CK+   
Sbjct: 2   GSLPDIVTYNSLIDGYCK---YGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMK 58

Query: 313 EKAFRLFLKLVRSDNYK---PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           E+ F +++ L+    +K   PNV TY   I   CK   ++      + M++ G++PN   
Sbjct: 59  EEVF-IYMGLM----WKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIA 113

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +T LI G+ K+GN + AY L   M K    PN+Y Y A+I+G CK+G ++ A     K  
Sbjct: 114 FTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKML 173

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  +  +   YT ++  H K+     A+  F  M K     DI AY  +I+      ++ 
Sbjct: 174 EVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLD 233

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +  +  ++ +  GL P K   T+++  + + GN  +A   ++ +   G  PD +T  +LI
Sbjct: 234 KVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLI 293

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
            GLCK  +  +A  ++           EV+   L    CK+G+      ++  + +  ++
Sbjct: 294 DGLCKDGRYHDAKGYFCKEKAN-----EVSYTALIDGICKEGNLDEVERVVMEMSESGFV 348

Query: 610 R---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL------KNACYESNKY 660
                  + I +LC + ++  A    +K++ +  ++D ++ ++L      K    E+ + 
Sbjct: 349 PDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQ- 407

Query: 661 ALFSDLSQR 669
            LF D+ +R
Sbjct: 408 -LFDDMLKR 415



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 166/329 (50%), Gaps = 11/329 (3%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           C++  +++IG L   + +  +M  +  LP + +    + G  C+ G++E AE  F +M  
Sbjct: 116 CLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGF-CKRGMLERAEWFFLKMLE 174

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +++ Y  ++  + + G +  A ++ S M      LD     ++I+   + G    
Sbjct: 175 VGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNG---R 231

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +  E++E+MVR G  P+    T L+    K G T+ A+ ++ +L+    ++P+  T +
Sbjct: 232 LDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNR-GFEPDAVTIS 290

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           ++I G CK+ + + A+    + K      N  +YT+LI G CK GN +    ++  M + 
Sbjct: 291 SLIDGLCKDGRYHDAKGYFCKEK-----ANEVSYTALIDGICKEGNLDEVERVVMEMSES 345

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ + Y + I  LC++G++ EA+++  K  +  +  D +TY+ L+     +    +A
Sbjct: 346 GFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEA 405

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
             LF  M+K G+ PD   +  LI  + +Q
Sbjct: 406 KQLFDDMLKRGIIPDSMVFDILIRGYLKQ 434



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 24/251 (9%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVS---------------SFAEIGRLKEGF 173
           FR  +  Y V  + L++NG  ++  EVM+ MV                +  + G  K  +
Sbjct: 212 FRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAY 271

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
            +  E+ N G      T++ ++   C+ G    A+  F   C     A+  SY  ++   
Sbjct: 272 GVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYF---CKEK--ANEVSYTALIDGI 326

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C+ G + E +R +  M + G + D    T  I   C +   G I +AF++  +MV +G  
Sbjct: 327 CKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQ---GKIVEAFKVKNKMVEEGID 383

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            ++ T++ LI GL  KG   +A +LF  +++     P+   +  +I GY K++       
Sbjct: 384 LDLLTYSSLIFGLANKGLMIEAKQLFDDMLKR-GIIPDSMVFDILIRGYLKQDNPVAISH 442

Query: 354 LLERMKEQGLL 364
           L E M+ +GLL
Sbjct: 443 LHEEMRRRGLL 453



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 21/202 (10%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S   F     V    ++     G++ E F +  +M   G+ L   T + ++      GL
Sbjct: 342 MSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGL 401

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLT 262
           +  A+++FD+M  RG+  D+  + +++  Y +             M  RG + +D  T++
Sbjct: 402 MIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGLLTIDKITIS 461

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                     FR   ++     E  V++    N            K+ + E  F +F   
Sbjct: 462 ----------FRNQTEEFVSKQESYVQRPCPSNYIKR--------KQKYMEFDFHIFRDK 503

Query: 323 VRSDNYKPNVHTYTAMISGYCK 344
            R   Y+   H Y  + S YC+
Sbjct: 504 FRIPGYRR--HVYCLLFSCYCQ 523


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 231/485 (47%), Gaps = 9/485 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++S     G+LK+  +++  M  NG +P I S  N ++   C+ G  ++A  +   M  +
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVS-YNTLLSWCCKKGRFKFALVLIHHMECK 239

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+ AD  +Y + + + CR  R  +    L  M ++    +  +   LI  F  +G  G  
Sbjct: 240 GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVA 299

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + F    EM+     PN+ T+ +LI+G C  G  E+A R+ L ++ +++ +PN  T   
Sbjct: 300 TRVFN---EMIELNLSPNLITYNILINGYCINGNFEEALRV-LDVMEANDVRPNEVTIGT 355

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G  K  K + A  +LER        N  ++T +I G C+ G  + A+ L+  M K+G
Sbjct: 356 LLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  ++ +I+G CK G + +A E++ K ++     + + ++ L+    K     +A+
Sbjct: 416 VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAM 475

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             +  M   G N D     +L+A+ C   K+ E+E+F       GL P   T+  +I GY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G+ S A   F RM   G  P   TYG+L+  LCK     EA +  + +    ++   
Sbjct: 536 ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHK 634
           ++  TL  E  K G+   A+ + E + +   +    T   ++  L  E R+  A +F  +
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 635 LLGKD 639
           L+ K+
Sbjct: 656 LMQKE 660



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 191/393 (48%), Gaps = 4/393 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F +M    VC + SS+ +++   C  G++ +A   L+ M   G +    +   L++  C 
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           KG     K A  L+  M  KG + +V T+ + ID LC+   + + + L LK +R+    P
Sbjct: 223 KG---RFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGY-LVLKKMRNKMITP 278

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  +Y  +I+G+ KE K+  A  +   M E  L PN  TY  LI G+C  GNFE A  ++
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVL 338

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D+M      PN      +++GL K  +   A  +L++        + I++T+++    + 
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRN 398

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A  L   M K G++PDI  ++ LI  FC+   + ++++   +    G  P    +
Sbjct: 399 GLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIF 458

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +++I    + GN+  A+K++  MN  G   DN T  +L++ LC+  KL EA +F   +  
Sbjct: 459 STLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISR 518

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G+ P  VT   +   Y   GD + A  + + +
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDGSGAFSVFDRM 551



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 215/452 (47%), Gaps = 13/452 (2%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + S     R  +G+ ++ +M N  +     + N ++    + G +  A  VF+EM    +
Sbjct: 252 IDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             +  +Y +++  YC  G   EA R L  M       +  T+  L+              
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSA---KFDV 368

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  +LE         N  +HTV+IDGLC+ G  ++AF+L +++ + D   P++ T++ +I
Sbjct: 369 ARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCK-DGVHPDIITFSVLI 427

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G+CK   +N+A+ ++ ++  +G +PN   +++LIY  CKVGN   A      M   G  
Sbjct: 428 NGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQN 487

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            + +  N+++  LC+ G++ EA E L    +  L  + +T+  +++ +    +   A  +
Sbjct: 488 ADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSV 547

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F RM+  G +P    Y +L+   C+ +   E+ K  ++     L     +Y ++I    +
Sbjct: 548 FDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISK 607

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            GN+  AV+ F+ M Q    PD+ TY  ++SGL ++ +L  A  F   ++ K I    +T
Sbjct: 608 SGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI----LT 663

Query: 580 RVTLAYE-----YCKQGDSATAMIILESLDKK 606
             ++ Y        K G S  A+ + + +++K
Sbjct: 664 LNSIVYTCFIDGLFKAGQSKAALYLFKEMEEK 695



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 66/551 (11%)

Query: 146 NGNFERAHEVMQ------------------------------------------------ 157
           NGNFE A  V+                                                 
Sbjct: 328 NGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCIS 387

Query: 158 --CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
              M+      G L E F ++IEM  +G+     T + ++   C++G +  A+EV  ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY 447

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G   +   +  ++   C++G V EA ++ +AM   G   DN T   L+ + C+    G
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCEN---G 504

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +A E L  + R G  PN  T   +I+G    G    AF +F +++ S  + P+  TY
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMI-SCGHHPSPFTY 563

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            +++   CK +    A  LL+++    L  +T +Y +LI    K GN   A  L + M +
Sbjct: 564 GSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ 623

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQAETK 454
               P+ Y Y  I+ GL ++GR+  A+  L +  Q+E L  + I YT  +    K  ++K
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            AL LF  M + GL+ D+ A  ++   + R  K+  +     +     + P   T+  ++
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            GY R  +I S  K +  M + G  P+ +TY +LI GLC    L+   +  +  I +  +
Sbjct: 744 HGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESST 803

Query: 575 PCEVTRVTLAYEYCKQGDSATAM-------IILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
             ++T   L  + C+  D    +       +   SLDK       + L+R++ S+     
Sbjct: 804 IDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYF-- 861

Query: 628 AALFFHKLLGK 638
             +F H++L K
Sbjct: 862 --VFMHEMLKK 870



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 42/415 (10%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A   LLI  +  +G  G    A      M+ +G+KP+VYT  +++  + K       +  
Sbjct: 106 AVFDLLIRVYLRQGMVG---HAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 162

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +++ S    PNV ++  +IS  C + K+ +A  +L  M+  G +P   +Y +L+   C
Sbjct: 163 FKQMLTS-RVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G F+ A  L+  M  +G   ++  YN  ID LC+  R  + Y +LKK   + +  +++
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ-- 496
           +Y  L++  +K+ +   A  +F  M++  L+P++  Y  LI  +C     +E+ +     
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 497 EA------------ITAGLFPTKE---------------------TYTSMICGYLRDGNI 523
           EA            +  GL+ + +                     ++T MI G  R+G +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLL 401

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A +    M + G  PD IT+  LI+G CK   +++A +    +  +G  P  V   TL
Sbjct: 402 DEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 584 AYEYCKQGDSATAMIILESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            Y  CK G+   AM    +++   +     T N+L+  LC   ++  A  F H +
Sbjct: 462 IYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI 516



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/553 (22%), Positives = 235/553 (42%), Gaps = 27/553 (4%)

Query: 140  ATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGL 184
              SL  NG    A E +                C+++ +A +G     FS+   M + G 
Sbjct: 497  VASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGH 556

Query: 185  PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
                 T   ++ + C+      A ++  ++    +  D  SY  ++V   + G + EA R
Sbjct: 557  HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVR 616

Query: 245  WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNVYTHTVLI 303
                M+    + D+ T T +++    +   G +  AF  L  +++K     N   +T  I
Sbjct: 617  LFEEMIQNNILPDSYTYTCILSGLIRE---GRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 304  DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            DGL K G ++ A  LF K +       ++    ++  GY +  K+  A  L+ + + + +
Sbjct: 674  DGLFKAGQSKAALYLF-KEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNV 732

Query: 364  LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            +PN  T+  L++G+ +  +    + L +LM + G  PN   Y+++I GLC  G ++   +
Sbjct: 733  IPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIK 792

Query: 424  LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            +LK         D +T+ +L+ +  +  +  + + L   M    ++ D      +     
Sbjct: 793  MLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLV 852

Query: 484  RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
            R+   +    F  E +  G  PT + Y +M+    R G+I  A K   +M  +G + D+ 
Sbjct: 853  RRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDA 912

Query: 544  TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM---IIL 600
               A++ GL    K++EA    + M+     P   T  TL + +CK+ +   A    I++
Sbjct: 913  AECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILM 972

Query: 601  ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAALKNACYE 656
            E    KL I   N LI   C+   V  A  F+ ++  K    +    RV ++A+    Y 
Sbjct: 973  EHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYV 1032

Query: 657  SNKYALFSDLSQR 669
            S    +  DL+ R
Sbjct: 1033 SRGEIVLKDLNDR 1045



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 157/370 (42%), Gaps = 38/370 (10%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           +KP+V+T   +++   K  + +      ++M    + PN +++  LI   C  G  ++A 
Sbjct: 136 FKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAV 195

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +++ +M + G  P I +YN ++   CKKGR + A  L+     + +QAD  TY + +   
Sbjct: 196 NILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSL 255

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            + + + Q   +  +M    + P+  +Y TLI  F ++ K+  + + F E I   L P  
Sbjct: 256 CRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNL 315

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL------------------- 548
            TY  +I GY  +GN   A++    M      P+ +T G L                   
Sbjct: 316 ITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILER 375

Query: 549 ----------------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
                           I GLC+   LDEA Q    M   G+ P  +T   L   +CK G+
Sbjct: 376 YCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGN 435

Query: 593 SATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A  ++  + ++ ++      +TLI   C    V  A  F+  +    QN D  +  +
Sbjct: 436 INKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNS 495

Query: 650 LKNACYESNK 659
           L  +  E+ K
Sbjct: 496 LVASLCENGK 505



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 162/422 (38%), Gaps = 85/422 (20%)

Query: 158  CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE-----VFD 212
            C++S     GRL   F  +  +    +     TLN +V      GL +  +      +F 
Sbjct: 635  CILSGLIREGRLVCAFIFLGRLMQKEIL----TLNSIVYTCFIDGLFKAGQSKAALYLFK 690

Query: 213  EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            EM  +G+  D  +   +   Y RMG+V  A   +S   ++  I +  T  +L+  +    
Sbjct: 691  EMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYS--- 747

Query: 273  FRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
             RG  I   F+L   M R G+ PN  T+  LI GLC  G  E   ++ LK+  +++   +
Sbjct: 748  -RGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM-LKMFIAESSTID 805

Query: 332  VHTYTAMISGYCKEEKMNRA-----------------------EMLLERMKEQ------- 361
              T+  +I   C+   +++                        ++L+ RM  Q       
Sbjct: 806  DLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMH 865

Query: 362  -----GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL---- 412
                 G +P +  Y +++   C+VG+ + A+ L D M   G + +  A  A++ GL    
Sbjct: 866  EMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCG 925

Query: 413  -------------------------------CKKGRVQEAYELLKKAFQRELQADKITYT 441
                                           CKK   +EA+ L        ++ D + Y 
Sbjct: 926  KIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYN 985

Query: 442  ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            +L+S      +   AL  +  + + GL P++  Y  L++A   +  +   E   ++    
Sbjct: 986  VLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1045

Query: 502  GL 503
            GL
Sbjct: 1046 GL 1047



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 3/275 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+ N   ++ +I    ++G V  A         R  +    T  ++++  +K        
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+ + + P++ ++  LI+  C Q K+K++          G  PT  +Y +++   
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G    A+     M   G   D  TY   I  LC+ S+  +     + M  K I+P E
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 578 VTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V+  TL   + K+G    A  +      L+    + T N LI   C       A      
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDV 340

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           +   D   + V++  L N  Y+S K+ +  ++ +R
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILER 375


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 204/438 (46%), Gaps = 11/438 (2%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAML--DRGAILDNA-TLTLLITAFCDKGFRGSIK 278
           DA SY  ++ A CR G    A   L AM      A   NA + T+L+ A C         
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA---D 132

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  LL  M   G + +V T+  LI GLC     +KA  L  ++  S   +PNV  Y+++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES-GIEPNVVVYSSL 191

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + GYCK  +      +   M E+G+ P+   YT LI   CKVG  ++A+ +MD+M + G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN+  YN +I+ +CK+G V+EA  +LKK  ++ +  D +TY  L+       E  +A+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 459 LFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L   MV+    + P++  + ++I   C   +M+++ +        G      TY  +I G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            LR   +  A++    M  +G  PD+ TY  LI G CK  ++D A     +M  +GI P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFHK 634
               + L    C+QG    A  +   +D    +  V  +T+I   C    +  A      
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 635 LLGKDQNVDRVSLAALKN 652
           ++ +    D V+ + + N
Sbjct: 492 IVDEGLTPDAVTYSIVIN 509



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 225/471 (47%), Gaps = 18/471 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   V+ A E+  EMC  G+  +   Y  ++  YC+ GR  +  +    M ++G   D 
Sbjct: 161 CDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDV 220

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              T LI + C  G     K+A  +++ MVR+G +PNV T+ VLI+ +CK+G  ++A  +
Sbjct: 221 VMYTGLIDSLCKVG---KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYG 376
            LK +      P+V TY  +I G     +M+ A  LLE M   +  + PN  T+ S+I G
Sbjct: 278 -LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
            C +G   +A+ +  +M + GC  N+  YN +I GL +  +V++A EL+ +     L+ D
Sbjct: 337 LCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TY+IL+    K  +  +A  L   M   G+ P++  Y  L+ A C Q  M+ +   F 
Sbjct: 397 SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN 456

Query: 497 EAITAGLFPTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           E      FP     Y++MI G  + G++ +A +  + +   G  PD +TY  +I+   K 
Sbjct: 457 EMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWI--RTV 612
             ++ A    + M   G  P      +L   Y  +G+    + +I E + K + +  + +
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKII 574

Query: 613 NTLIRKLCSEKRVGMAAL-----FFHKLLGKDQNVDRVSLAALKNACYESN 658
           +TL   L +    G A L     F  ++   + N  +  +  L N C ++N
Sbjct: 575 STLSTSLVASNE-GKALLQSLPDFSAEISKGNINSPQELMKVLHNVCPQTN 624



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 14/443 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  + + GR ++   + +EM+  G+         ++   C++G  + A  V D M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +  +Y +++   C+ G V EA   L  M ++G   D  T   LI    D    
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV--- 303

Query: 275 GSIKQAFELLEEMVRKG--WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             + +A  LLEEMVR     KPNV T   +I GLC  G   +AF++   ++       N+
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR-AMMEETGCMVNL 362

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G  +  K+ +A  L++ M   GL P++ TY+ LI G CK+   +RA DL+  
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P ++ Y  ++  +C++G ++ A  L  +        D + Y+ ++    K  +
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGD 481

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            K A  L   +V  GL PD   Y+ +I  F +   M+ +    ++   +G  P    + S
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK---LDEACQFYESMI 569
           +I GY   G I+  ++  + M     A D+     L + L   ++   L ++   + + I
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEI 601

Query: 570 GKG--ISPCEVTRVTLAYEYCKQ 590
            KG   SP E+ +V   +  C Q
Sbjct: 602 SKGNINSPQELMKVL--HNVCPQ 622


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 222/485 (45%), Gaps = 8/485 (1%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           CM+  +A +GRLKE   M  EM   GL     T N  +   C+ G  + A E FD M A+
Sbjct: 340 CMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK 399

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  Y   G   +     ++M   G   +    T+LI A+     RG +
Sbjct: 400 GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK---RGMV 456

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  +  EM ++G  P+V T++ +I    + G    A   F ++V +   +PN   Y++
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV-ARGIQPNTAVYSS 515

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +I G+C    + +A+ L+  M  +G+  P+   ++S+I   CK G    A+D+ DL    
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P +  +N++IDG C  G++ +A+++L       ++ D +TY  LL  + K       
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L LF  M + G+ P+   Y  ++A   R  +   + K F E I +G   T   Y  ++ G
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R+     A+  FQ++  +           +I+ + K  + +EA + + ++   G+ P 
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFH 633
           E T   +     K G    A  +  S++K   +   R +N +IR L  +  +  A  +  
Sbjct: 756 ESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815

Query: 634 KLLGK 638
           K+ GK
Sbjct: 816 KVDGK 820



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 11/438 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSA 248
           T N ++   C     +    +F  +   G+  D  +   ++   C   R  EA +  L  
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW--KPNVYTHTVLIDGL 306
           M + G + +  + ++++ A CD       ++A +LL+ M ++G    P+V  ++ +I G 
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMS---QRALDLLQMMAKQGGACSPDVVAYSTVIHGF 275

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
             +G T KA  LF ++ R    KP+V TY  +I   CK   M++AE++L +M   G  P+
Sbjct: 276 FNEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           T TY+ +I+G+  +G  + A  +   M K G  PNI   N+ +  LCK GR +EA E   
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
               +  + D  +Y  LL  +  +      +GLF  M   G+  + H +T LI A+ ++ 
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            + ++   F E    G+ P   TY+++I  + R G ++ A++ F +M   G  P+   Y 
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYCKQGDSATAMIILE---S 602
           ++I G C    L +A +    MI KGI  P  V   ++    CK G    A  I +    
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATD 574

Query: 603 LDKKLWIRTVNTLIRKLC 620
           + ++  + T N+LI   C
Sbjct: 575 IGERPGVITFNSLIDGYC 592



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 41/433 (9%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           S+ SNG     H V   ++ ++A+ G + +   +  EM   G+     T + V+     +
Sbjct: 430 SMKSNGIAANCH-VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRM 488

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNAT 260
           G +  A E F++M ARG+  + + Y  ++  +C  G + +A   +S M+++G    D   
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            + +I + C  G    +  A ++ +     G +P V T   LIDG C  G  +KAF++ L
Sbjct: 549 FSSVINSLCKDG---RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI-L 604

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
             +     +P++ TY  ++ GY K  ++N    L   M+ +G+ PNT TY  ++ G  + 
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G    A      M + G T  +  Y  I+ GLC+     EA  L +K     +   K + 
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV---KFSI 721

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           TIL                                 T+I A  + ++ +E+++ F     
Sbjct: 722 TIL--------------------------------NTMINAMYKVQRKEEAKELFATISA 749

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
           +GL P + TY  MI   L+DG +  A   F  M + G  P +     +I  L ++ ++ +
Sbjct: 750 SGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAK 809

Query: 561 ACQFYESMIGKGI 573
           A  +   + GK I
Sbjct: 810 AGNYLSKVDGKRI 822



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 5/371 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+F+ +GRL +      +M   G+   T+  + ++   C  G +  A+E+  EM  +G
Sbjct: 481 VISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 219 VC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           +   D   +  ++ + C+ GRV +A        D G      T   LI  +C     G +
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYC---LVGKM 597

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AF++L+ M   G +P++ T+  L+DG  K G       LF ++ R    KPN  TY  
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK-GVKPNTVTYGI 656

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           M++G  +  +   A      M E G     + Y  ++ G C+    + A  L   +G   
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              +I   N +I+ + K  R +EA EL        L  ++ TY +++   LK    + A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M K+G+ P       +I     + ++ ++  +  +     +     T + M+  +
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 518 LRDGNISSAVK 528
            R G     +K
Sbjct: 837 SRKGKYQEDIK 847



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 38/286 (13%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           E    Q  +P   TY  L+   C+    +    L   + + G   +    N ++  LC  
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205

Query: 416 GRVQEA-------------------YELLKKAF------QRELQ-------------ADK 437
            R +EA                   Y ++ KA       QR L               D 
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           + Y+ ++     + ET +A  LF  M + G+ PD+  Y  +I A C+ + M ++E   ++
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             T G  P   TY+ MI GY   G +  A K F+ M + G  P+ +T  + ++ LCK  +
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             EA +F++SM  KG  P   +  TL + Y  +G  A  + +  S+
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSM 431



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 46/345 (13%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLP-----LITSTLNRVVGIACELGLVEYAEE 209
           V   ++  F   G L +   +V EM N G+P       +S +N +    C+ G V  A +
Sbjct: 512 VYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL----CKDGRVMDAHD 567

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FD     G      ++  ++  YC +G++ +A + L AM   G   D  T   L+  + 
Sbjct: 568 IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD--- 326
             G    I     L  EM RKG KPN  T+ +++ GL + G T  A + F +++ S    
Sbjct: 628 KNG---RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 327 -------------------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
                                          N K ++     MI+   K ++   A+ L 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             +   GLLPN +TY  +I    K G  E A ++   M K G  P     N II  L +K
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           G + +A   L K   + +  +  T +++LS   ++ + ++ + L 
Sbjct: 805 GEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 104/263 (39%), Gaps = 6/263 (2%)

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           G +   P    YN ++D  C+  R      L     +  L+ D+IT   LL        T
Sbjct: 149 GTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRT 208

Query: 454 KQALG-LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG--LFPTKETY 510
           ++A+  L  RM + G  P+  +Y+ ++ A C     + +    Q     G    P    Y
Sbjct: 209 EEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAY 268

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +++I G+  +G    A   F  M + G  PD +TY  +I  LCK   +D+A      M  
Sbjct: 269 STVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGM 627
            G  P  VT   + + Y   G    A  +   + K+  I    T N+ +  LC   R   
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 628 AALFFHKLLGKDQNVDRVSLAAL 650
           AA FF  +  K    D  S   L
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTL 411


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 232/503 (46%), Gaps = 50/503 (9%)

Query: 149 FERAHEVMQC---------MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           F+R HE+  C         ++++  E  +  E  S  +     GL     T N ++ I+C
Sbjct: 76  FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 135

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                + A+E+ + M  +G   D  SY  ++ +  + G +++A +    M +RG   D A
Sbjct: 136 RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              +LI  F  KG    I  A E+ E +++     PN+ ++ V+I+GLCK G  +++F +
Sbjct: 196 CYNILIDGFFKKG---DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 252

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++ +++  + +++TY+ +I G C    ++ A  + + M E G+ P+   Y +++ G+ 
Sbjct: 253 WHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 311

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G  E   +L  +M KEGC   + +YN +I GL +  +V EA  + +   +++  AD +
Sbjct: 312 RAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM 370

Query: 439 TYTILLSEHLKQAETKQAL-----------------------------------GLFCRM 463
           TY +L+    K     +AL                                   G+  +M
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K G  P+ +    +I  F R  K++++ +FF   ++ G FPT  TY ++I G  +    
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A    + M Q G  P+ ITY  L++GLC+  KLD A   +   + KG  P       +
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550

Query: 584 AYEYCKQGDSATAMIILESLDKK 606
            +  C  G    A+ +   + ++
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQR 573



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 205/432 (47%), Gaps = 11/432 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+  E F +   M  N       T + ++   C  G ++ A  V+ EM   G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           V  D   Y  M+  Y R GR+ E  + W   ++++       +  +LI    +      +
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELW--KVMEKEGCRTVVSYNILIRGLFENA---KV 350

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT--Y 335
            +A  + E +  K    +  T+ VL+ GLCK G+  KA  +   L  ++N + ++ T  Y
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI---LEEAENGRGDLDTFAY 407

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           ++MI+G C+E +++    +L++M + G  PN     ++I G  +    E A      M  
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +GC P +  YN +I+GL K  R  EAY L+K+  Q+  + + ITY++L++   +  +   
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDM 527

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L+C+ ++ G  PD+  +  +I   C   K++++ + + E       P   T+ +++ 
Sbjct: 528 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLME 587

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+ +  +   A K +  + Q G  PD I+Y   + GLC   ++ +A  F    + +G+ P
Sbjct: 588 GFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647

Query: 576 CEVTRVTLAYEY 587
             +T   L   Y
Sbjct: 648 TAITWNILVQGY 659



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 228/511 (44%), Gaps = 52/511 (10%)

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
           L + +   E+F   C  G+     SY  ++ A     +  EA+ +       G   +  T
Sbjct: 73  LDIFQRMHEIFG--CQPGI----RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQT 126

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF- 319
             +LI   C K       +A ELL  M  +G+ P+V+++  LI+ L K G+   A +LF 
Sbjct: 127 YNILIKISCRKK---QFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183

Query: 320 ----------------------------------LKLVRSDNYKPNVHTYTAMISGYCKE 345
                                              +L++  +  PN+ +Y  MI+G CK 
Sbjct: 184 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 243

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K + +  +  RMK+     +  TY++LI+G C  GN + A  +   M + G +P++  Y
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +++G  + GR++E  EL  K  ++E     ++Y IL+    + A+  +A+ ++  + +
Sbjct: 304 NTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPE 362

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
                D   Y  L+   C+   + ++    +EA           Y+SMI G  R+G +  
Sbjct: 363 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 422

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
                 +M + GC P+     A+I+G  + SKL++A +F+ +M+ KG  P  VT  TL  
Sbjct: 423 VAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 482

Query: 586 EYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK---- 638
              K    + A  +++ + +K W   + T + L+  LC  K++ MA   + + L K    
Sbjct: 483 GLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP 542

Query: 639 DQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           D  +  + +  L ++    +   L+S++ QR
Sbjct: 543 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 179/364 (49%), Gaps = 5/364 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   M++ +   GR++E   +   M   G   + S  N ++    E   V+ A  +++ +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISIWELL 360

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +  CAD+ +Y ++V   C+ G + +A   L    +    LD    + +I   C +G  
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG-- 418

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +   +L++M + G KPN Y    +I+G  +    E A R F  +V    + P V T
Sbjct: 419 -RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVT 476

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+G  K E+ + A  L++ M ++G  PN  TY+ L+ G C+    + A +L     
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  P++  +N II GLC  G+V++A +L  +  QR    + +T+  L+    K  + +
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  ++  +++ GL PDI +Y   +   C   ++ ++  F  +A+  G+ PT  T+  ++
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656

Query: 515 CGYL 518
            GYL
Sbjct: 657 QGYL 660



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 170/386 (44%), Gaps = 45/386 (11%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           +   ++++ + P +  H        K    ++A  +F ++      +P + +Y ++++  
Sbjct: 45  VFHHILKRLFDPKLVAH-----AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 99

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            +  K + AE      +  GL PN  TY  LI   C+   F++A +L++ M  +G +P++
Sbjct: 100 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDV 159

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           ++Y  +I+ L K G + +A +L  +  +R +  D   Y IL+    K+ +   A  ++ R
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219

Query: 463 MVKA---------------GL---------------------NPDIHAYTTLIAAFCRQK 486
           ++K                GL                       D++ Y+TLI   C   
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            +  + + ++E    G+ P    Y +M+ GYLR G I   ++ ++ M + GC    ++Y 
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYN 338

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK- 605
            LI GL + +K+DEA   +E +  K      +T   L +  CK G    A+ ILE  +  
Sbjct: 339 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 398

Query: 606 --KLWIRTVNTLIRKLCSEKRVGMAA 629
              L     +++I  LC E R+   A
Sbjct: 399 RGDLDTFAYSSMINGLCREGRLDEVA 424


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 187/347 (53%), Gaps = 7/347 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  R+ +   +V +M   G        N ++  +C++GLV  A E+FD M   G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V ADA +Y  +V   C  GR ++A R +  M+ R  + +  T T +I  F  +G      
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG---KFS 261

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L EEM R+   P+V+T+  LI+GLC  G  ++A +  L L+ +    P+V TY  +
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA-KQMLDLMVTKGCLPDVVTYNTL 320

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK ++++    L   M ++GL+ +T TY ++I G+ + G  + A ++   M     
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  Y+ ++ GLC   RV++A  L +   + E++ D  TY I++    K    + A  
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           LF  +   GL PD+ +YTT+I+ FCR+++  +S+  +++    GL P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 7/384 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C       A  V  +M   G   D  +   ++  +C+  RV +A   +S M +
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   D      +I   C  G    +  A EL + M R G + +  T+  L+ GLC  G 
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGL---VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A RL   +V  D   PNV T+TA+I  + KE K + A  L E M  + + P+  TY 
Sbjct: 225 WSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           SLI G C  G  + A  ++DLM  +GC P++  YN +I+G CK  RV E  +L ++  QR
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  D ITY  ++  + +      A  +F RM      P+I  Y+ L+   C   +++++
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKA 400

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F+    + +     TY  +I G  + GN+  A   F+ ++  G  PD ++Y  +ISG
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460

Query: 552 LCKQSKLDEACQFYESMIGKGISP 575
            C++ + D++   Y  M   G+ P
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 7/381 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F  M   G+  D  SY +++   CR  R   A   +  M+  G   D  T++ LI  FC
Sbjct: 91  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            +G R  +  A +L+ +M   G++P+V  +  +IDG CK G    A  LF ++ R D  +
Sbjct: 151 -QGNR--VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVR 206

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +  TY ++++G C   + + A  L+  M  + ++PN  T+T++I    K G F  A  L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +    P+++ YN++I+GLC  GRV EA ++L     +    D +TY  L++   K
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +   LF  M + GL  D   Y T+I  + +  +   +++ F    +    P   T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+ ++ G   +  +  A+  F+ M +     D  TY  +I G+CK   +++A   + S+ 
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443

Query: 570 GKGISPCEVTRVTLAYEYCKQ 590
            KG+ P  V+  T+   +C++
Sbjct: 444 CKGLKPDVVSYTTMISGFCRK 464



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 13/362 (3%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  ++ +M++ G++P+V T + LI+G C+      A  L  K+     ++P+V  Y  +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTII 181

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G CK   +N A  L +RM+  G+  +  TY SL+ G C  G +  A  LM  M      
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL---LSEHLKQAETKQA 456
           PN+  + A+ID   K+G+  EA +L ++  +R +  D  TY  L   L  H +  E KQ 
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L   MV  G  PD+  Y TLI  FC+ K++ E  K F+E    GL     TY ++I G
Sbjct: 302 LDL---MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y + G   +A + F RM+     P+  TY  L+ GLC   ++++A   +E+M    I   
Sbjct: 359 YFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
             T   + +  CK G+   A  +  SL  K     + +  T+I   C +++   + L + 
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475

Query: 634 KL 635
           K+
Sbjct: 476 KM 477



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 11/410 (2%)

Query: 240 TEADRWLS-AMLDRGAILDNATLTLLITAFCDKGF---RGS--IKQAFELLEEMVRKGWK 293
           ++A+++L+  +L +G    N  +   I+ F  + F   R S  +++  +L  +M++    
Sbjct: 11  SKANKFLNLCLLQKG----NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPL 66

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P++   + ++  + K    +    LF  +        ++++Y  +I+  C+  +   A  
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALS 125

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           ++ +M + G  P+  T +SLI G C+      A DL+  M + G  P++  YN IIDG C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K G V +A EL  +  +  ++AD +TY  L++          A  L   MV   + P++ 
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            +T +I  F ++ K  E+ K ++E     + P   TY S+I G    G +  A +    M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              GC PD +TY  LI+G CK  ++DE  + +  M  +G+    +T  T+   Y + G  
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 594 ATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             A  I   +D +  IRT + L+  LC   RV  A + F  +   +  +D
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 15/299 (5%)

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR----ELQADK 437
           N E   DL   M +    P+I  ++ ++  + K     + Y+L+   F       +  D 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAK----SKNYDLVISLFHHMEVCGIGHDL 104

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            +Y I+++   + +    AL +  +M+K G  PD+   ++LI  FC+  ++ ++     +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G  P    Y ++I G  + G ++ AV+ F RM + G   D +TY +L++GLC   +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
             +A +    M+ + I P  +T   +   + K+G  + AM + E + ++     + T N+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
           LI  LC   RV  A      ++ K    D V+   L N   +S +      LF +++QR
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           TS++N ++        V+ AE+ F     R V  D  ++  ++   CR+G++ +A     
Sbjct: 156 TSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +   G     AT   LI  +C KG  G++     LL+EMV  G  P   T  VLI+G C
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYC 275

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K   T  A R+F ++ +      +V TY ++ISG C E K+     L+E M++ GL PN 
Sbjct: 276 KNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+  ++ G CK G    A D +D M +    P++  YN +ID   + G++++A  + + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ +  +  TY  L++   +  + + A GL   M + G+  D+  Y  LI A C + +
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++++ K   E    GL P   TY ++I G+   GNI SA +   RM +     + +TY  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            I   C+  K+DEA      M+ K + P  +T     YE  K+G
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT-----YETIKEG 553



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 188/391 (48%), Gaps = 22/391 (5%)

Query: 258 NATLTLLITA----FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           NA L  L+ A      +K FR ++           R+   P++YT   +I GLC+ G   
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSAL-----------RRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE---KMNRAEMLLERMKEQGLLPNTNTY 370
           KA  +  K +++    P+V TY ++I GYCK+     M   +MLL+ M E G+ P   T+
Sbjct: 209 KAGDV-AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI G+CK  N   A  + + M ++G   ++  YN++I GLC +G+V+E  +L+++   
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  ++IT+  +L    K+     A      M +  + PD+  Y  LI  + R  KM++
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +    +     G+ P   TY  +I G+ R G+  SA      M + G   D +TY  LI 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKL 607
            LC + ++ +A +  + M   G+ P  +T  T+   +C +G+  +A  I   +E   K+ 
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            + T N  I+  C   ++  A    +++L K
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 170/366 (46%), Gaps = 7/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE---LGLVEYAEEVFDEMC 215
           ++S    IG+L++   +  ++   GL    +T N ++   C+    G + + + +  EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+   A ++ +++  YC+      A R    M  +G      T   LI+  C +G   
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG--- 313

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++  +L+EEM   G  PN  T   ++ G CKKG    A   ++  +   N +P+V  Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND-WIDGMTERNVEPDVVIY 372

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I  Y +  KM  A  + E M ++G+ PN  TY  LI G  + G++  A  L+D M +
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G   ++  YN +I  LC KG V++A +LL +  +  L+ + +TY  ++     +   K 
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +  RM K     ++  Y   I  FC+  KM E+     E +   L P   TY ++  
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552

Query: 516 GYLRDG 521
           G +  G
Sbjct: 553 GMMEKG 558



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 7/342 (2%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           +L+  L +     +A+  FL    S   ++P+  +  A+++G    ++++ AE       
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            + + P+  T+ ++I G C++G   +A D+   +   G  P++  YN++IDG CKKG   
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 420 EAYE---LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
             Y    LLK+  +  +    +T+ +L++ + K + T  A+ +F  M + G+   +  Y 
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI+  C + K++E  K  +E    GL P + T+  ++ G+ + G ++ A  +   M + 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              PD + Y  LI    +  K+++A    E+M  KGISP   T   L   + + GD  +A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L+ + +K     + T N LI  LC +  V  A     ++
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 20/300 (6%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N ++   C  G VE   ++ +EM   G+  +  ++  ++  +C+ G
Sbjct: 289 EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKG 348

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +A+ W+  M +R    D     +LI  +      G ++ A  + E M +KG  PNV 
Sbjct: 349 MMADANDWIDGMTERNVEPDVVIYNILIDVY---RRLGKMEDAMAVKEAMAKKGISPNVT 405

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI G  + G    A  L L  ++    + +V TY  +I   C + ++ +A  LL+ 
Sbjct: 406 TYNCLITGFSRSGDWRSASGL-LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E GL PN  TY ++I G C  GN + AY++   M K     N+  YN  I   C+ G+
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA +LL +   + L  + ITY     E +K+            M++ G  PDI   T 
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITY-----ETIKEG-----------MMEKGYTPDIRGCTV 568



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 44/240 (18%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    +   ++  +  +G++++  ++   M   G+    +T N ++      G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             + DEM  +G+ AD  +Y +++ A C  G V +A + L  M + G   ++ T   +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FCDK   G+IK A+E+   M +   + NV T+ V I   C+ G                 
Sbjct: 484 FCDK---GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG----------------- 523

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
                              KM+ A  LL  M ++ L+PN  TY ++     K G  E+ Y
Sbjct: 524 -------------------KMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 35/157 (22%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++ F+  G  +    ++ EM   G+     T N ++G  C  G V  A ++ DEM  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 217 --------------RGVC---------------------ADASSYKLMVVAYCRMGRVTE 241
                         +G C                     A+  +Y + +  +C++G++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           A+  L+ MLD+  + +  T   +     +KG+   I+
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           TS++N ++        V+ AE+ F     R V  D  ++  ++   CR+G++ +A     
Sbjct: 156 TSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +   G     AT   LI  +C KG  G++     LL+EMV  G  P   T  VLI+G C
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYC 275

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K   T  A R+F ++ +      +V TY ++ISG C E K+     L+E M++ GL PN 
Sbjct: 276 KNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+  ++ G CK G    A D +D M +    P++  YN +ID   + G++++A  + + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ +  +  TY  L++   +  + + A GL   M + G+  D+  Y  LI A C + +
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++++ K   E    GL P   TY ++I G+   GNI SA +   RM +     + +TY  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            I   C+  K+DEA      M+ K + P  +T     YE  K+G
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT-----YETIKEG 553



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 188/391 (48%), Gaps = 22/391 (5%)

Query: 258 NATLTLLITA----FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
           NA L  L+ A      +K FR ++           R+   P++YT   +I GLC+ G   
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSAL-----------RRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE---KMNRAEMLLERMKEQGLLPNTNTY 370
           KA  +  K +++    P+V TY ++I GYCK+     M   +MLL+ M E G+ P   T+
Sbjct: 209 KAGDV-AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             LI G+CK  N   A  + + M ++G   ++  YN++I GLC +G+V+E  +L+++   
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  ++IT+  +L    K+     A      M +  + PD+  Y  LI  + R  KM++
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +    +     G+ P   TY  +I G+ R G+  SA      M + G   D +TY  LI 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKL 607
            LC + ++ +A +  + M   G+ P  +T  T+   +C +G+  +A  I   +E   K+ 
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            + T N  I+  C   ++  A    +++L K
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 170/366 (46%), Gaps = 7/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE---LGLVEYAEEVFDEMC 215
           ++S    IG+L++   +  ++   GL    +T N ++   C+    G + + + +  EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+   A ++ +++  YC+      A R    M  +G      T   LI+  C +G   
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG--- 313

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++  +L+EEM   G  PN  T   ++ G CKKG    A   ++  +   N +P+V  Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND-WIDGMTERNVEPDVVIY 372

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             +I  Y +  KM  A  + E M ++G+ PN  TY  LI G  + G++  A  L+D M +
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G   ++  YN +I  LC KG V++A +LL +  +  L+ + +TY  ++     +   K 
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +  RM K     ++  Y   I  FC+  KM E+     E +   L P   TY ++  
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552

Query: 516 GYLRDG 521
           G +  G
Sbjct: 553 GMMEKG 558



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 7/342 (2%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           +L+  L +     +A+  FL    S   ++P+  +  A+++G    ++++ AE       
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            + + P+  T+ ++I G C++G   +A D+   +   G  P++  YN++IDG CKKG   
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 420 EAYE---LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
             Y    LLK+  +  +    +T+ +L++ + K + T  A+ +F  M + G+   +  Y 
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           +LI+  C + K++E  K  +E    GL P + T+  ++ G+ + G ++ A  +   M + 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
              PD + Y  LI    +  K+++A    E+M  KGISP   T   L   + + GD  +A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L+ + +K     + T N LI  LC +  V  A     ++
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 6/293 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+     T N ++   C  G VE   ++ +EM   G+  +  ++  ++  +C+ G
Sbjct: 289 EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKG 348

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + +A+ W+  M +R    D     +LI  +      G ++ A  + E M +KG  PNV 
Sbjct: 349 MMADANDWIDGMTERNVEPDVVIYNILIDVY---RRLGKMEDAMAVKEAMAKKGISPNVT 405

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI G  + G    A  L L  ++    + +V TY  +I   C + ++ +A  LL+ 
Sbjct: 406 TYNCLITGFSRSGDWRSASGL-LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M E GL PN  TY ++I G C  GN + AY++   M K     N+  YN  I   C+ G+
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           + EA +LL +   + L  + ITY  +    +++  T    G  C + +A  NP
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG--CTVSQASENP 575



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 44/240 (18%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    +   ++  +  +G++++  ++   M   G+    +T N ++      G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             + DEM  +G+ AD  +Y +++ A C  G V +A + L  M + G   ++ T   +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
           FCDK   G+IK A+E+   M +   + NV T+ V I   C+ G                 
Sbjct: 484 FCDK---GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG----------------- 523

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
                              KM+ A  LL  M ++ L+PN  TY ++     K G  E+ Y
Sbjct: 524 -------------------KMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 35/157 (22%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++ F+  G  +    ++ EM   G+     T N ++G  C  G V  A ++ DEM  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 217 --------------RGVC---------------------ADASSYKLMVVAYCRMGRVTE 241
                         +G C                     A+  +Y + +  +C++G++ E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           A+  L+ MLD+  + +  T   +     +KG+   I+
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 232/527 (44%), Gaps = 21/527 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV---- 210
           V   ++  +   G +++   +   M   G      T N ++G      +V+  E+V    
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG-----SIVKSCEDVSVWS 179

Query: 211 -FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
              EM  R +C D +++ +++   C  G   ++   +  M   G      T   ++  +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            KG     K A ELL+ M  KG   +V T+ +LI  LC+   + K + L L+ +R     
Sbjct: 240 KKG---RFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGY-LLLRDMRKRMIH 295

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN  TY  +++G+  E K+  A  LL  M   GL PN  T+ +LI GH   GNF+ A  +
Sbjct: 296 PNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
             +M  +G      +Y  ++DGLCK      A     +  +  +   +ITYT ++    K
Sbjct: 356 FHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +A+ +   M K G++PDI  Y+ LI  FCR  ++K +++        GL P    
Sbjct: 416 NGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGII 475

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+++I    R G +   ++ ++ M   G  PD+ T+  L++ LCK  K+ EA +F   M 
Sbjct: 476 YSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVG 626
             GI P  V+   L   Y   G+   A  + + + K        T  +L++ LC    + 
Sbjct: 536 SDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLI 595

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQR 669
            A  F   L      VD V    L  A C   N     +LF ++ QR
Sbjct: 596 AAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR 642



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 219/509 (43%), Gaps = 14/509 (2%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     ++      G  KE   M   M   GL     +   ++   C+    + A   + 
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
            M   GVC    +Y  M+   C+ G + EA   L+ M   G   D  T + LI  FC  G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVG 452

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +K A E++  + R G  PN   ++ LI   C+ G  ++  R++  ++   N  P+ 
Sbjct: 453 ---RLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGN-TPDH 508

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  +++  CK  K+  AE  +  M   G+LPN  ++  LI G+   G   +A+ + D 
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDE 568

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K G  P  + Y +++ GLCK G +  A + LK         D +    L++   K   
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYT 511
             +A+ LF  MV+  + PD   YT+LI+  CR+ K   +  F +EA   G L P K  YT
Sbjct: 629 LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
             + G  + G   +   + Q+M+++G   D +T  A+I G  +  K+++       M  +
Sbjct: 689 CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILES------LDKKLWIRTVNTLIRKLCSEKRV 625
              P   T   L + Y K+   +T+ ++  S      L  KL   T  ++I  +C    +
Sbjct: 749 NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKL---TCYSIILGICESNML 805

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +        + +   VDR +   L + C
Sbjct: 806 EIGLKILKAFICRGVEVDRHTFNMLISKC 834



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 235/533 (44%), Gaps = 44/533 (8%)

Query: 142  SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
            ++I  GN    H     +V+S  + G++ E    +  MT++G+     + + ++      
Sbjct: 498  AMILEGN-TPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSS 556

Query: 202  GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
            G    A  VFDEM   G      +Y  ++   C+ G +  A+++L ++ +  A +D    
Sbjct: 557  GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 262  TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
              LITA C  G   ++ +A  L  EMV++   P+ +T+T LI GLC+KG T  A  LF K
Sbjct: 617  NTLITAMCKSG---NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI-LFAK 672

Query: 322  LVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
               +  N  PN   YT  + G  K  +        ++M + GL  +  T  ++I G+ ++
Sbjct: 673  EAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRM 732

Query: 381  GNFERAYDLMDLMGKEGCTPNIYAYN---------------------------------- 406
            G  E+ +DL+  MG +   PN+  YN                                  
Sbjct: 733  GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTC 792

Query: 407  -AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             +II G+C+   ++   ++LK    R ++ D+ T+ +L+S+     E   A  +   M  
Sbjct: 793  YSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852

Query: 466  AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
             G++ D +    +++   R  + +ES     E    G+ P    Y  ++ G  R G+I +
Sbjct: 853  LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKT 912

Query: 526  AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
            A    + M      P N+   A++  L K  K DEA     SM+   + P   +  TL +
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMH 972

Query: 586  EYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +CK G+   A+   +++ +   KL + + N LI  LC++  + +A   F ++
Sbjct: 973  LFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 206/464 (44%), Gaps = 33/464 (7%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  K+   ++ +M  +G      T N V+   C+ G  + A E+ D M  +GV AD  +Y
Sbjct: 207 GSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTY 266

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------- 272
            +++   CR  R  +    L  M  R    +  T   L+  F ++G              
Sbjct: 267 NMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLT 326

Query: 273 ------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
                               G+ K+A ++   M  KG      ++ VL+DGLCK    + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDL 386

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   ++++ R+      + TYT MI G CK   ++ A ++L  M + G+ P+  TY++LI
Sbjct: 387 ARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G C+VG  + A +++  + + G +PN   Y+ +I   C+ G ++E   + +        
Sbjct: 446 NGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNT 505

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D  T+ +L++   K  +  +A      M   G+ P+  ++  LI  +    +  ++   
Sbjct: 506 PDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F E    G  PT  TY S++ G  + G++ +A K+ + +  +  A D +    LI+ +CK
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCK 625

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
              LD+A   +  M+ + I P   T  +L    C++G +  A++
Sbjct: 626 SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAIL 669



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/560 (22%), Positives = 219/560 (39%), Gaps = 93/560 (16%)

Query: 131  HFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSM 175
            HF   + V  TSL   G    A E M+CM S                +   G   + FS+
Sbjct: 508  HFT--FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565

Query: 176  VIEMTNNG---------------------------------LPLITSTL--NRVVGIACE 200
              EMT  G                                 +P    T+  N ++   C+
Sbjct: 566  FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCK 625

Query: 201  LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
             G ++ A  +F EM  R +  D+ +Y  ++   CR G+   A  +      RG ++ N  
Sbjct: 626  SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNK- 684

Query: 261  LTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              ++ T F D  F+ G  K  F   ++M + G   +V T   +IDG  + G  EK   L 
Sbjct: 685  --VMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLL 742

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             ++  + N  PN+ TY  ++ GY K + ++ + ML   M   G+LP+  T  S+I G C+
Sbjct: 743  FEM-GNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICE 801

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
                E    ++      G   + + +N +I   C  G +  A++++       +  DK T
Sbjct: 802  SNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNT 861

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK---------- 489
               ++S   +    +++  +   M K G++P+   Y  L+   CR   +K          
Sbjct: 862  CDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMI 921

Query: 490  -------------------------ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
                                     E+    +  +   L PT  ++T+++  + ++GN++
Sbjct: 922  AHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVT 981

Query: 525  SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
             A++    M+  G   D ++Y  LI+GLC +  +  A + +E M   G      T   L 
Sbjct: 982  EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041

Query: 585  YEYCKQGDSATAM-IILESL 603
                 QG   +   IIL+ L
Sbjct: 1042 GGILSQGTEFSGTDIILKDL 1061


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 168/671 (25%), Positives = 287/671 (42%), Gaps = 135/671 (20%)

Query: 123 AIGFAKFRHFM--RLYIVCATSLI----SNGNFERAHEVMQCM---------------VS 161
           A+ F K   ++   L +V   SLI    S G+ ERA  V++ M               + 
Sbjct: 237 AVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296

Query: 162 SFAEIGRLKEGFSMVIEMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            +    +L+E   ++ EM  + G+ L       ++   C +  ++ A  + DEM   G+ 
Sbjct: 297 GYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR 356

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +      ++  YC+ G+V+EA+R L  M+D     ++ + + L+  FC +G    + +A
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGL---VTKA 413

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR---------------- 324
             +  EM+R G + NV TH  L+ GLC+ G  E A  ++  +++                
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 325 ------------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
                             +  Y  + + +  MI+G+CK EKM  AE    RMKE G  P+
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 367 TNTYTSLIYGHCKVGNFERAY--------------------------------DLMDLMG 394
             TY +LI G+CK+GN E A+                                ++MDL+ 
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 395 K---EGCTPNIYAYNAIIDGLCKKGRVQEAY----ELLKKAFQREL-----------QAD 436
           +   +G +PN+  Y  +I G C +GR+ +A+    ++++K F   +           +  
Sbjct: 594 EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG 653

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLN--------------------PDIHAYT 476
           +I    +L + +   +     G F R+ KA                       P+   Y 
Sbjct: 654 RIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYN 713

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
             IA  C+  K+ +++K F   +  G  P   TY ++I GY   GN++ A      M + 
Sbjct: 714 IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKR 773

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G AP+ ITY ALI+GLCK   LD A + ++ +  KG++P  ++   L   YCK G++  A
Sbjct: 774 GLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREA 833

Query: 597 MIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL--LGKDQNVDR-VSLAAL 650
           + +   + K+     + T + LI   C +  +G A     ++  L  DQN+ + V L   
Sbjct: 834 LDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEG 893

Query: 651 KNACYESNKYA 661
              C E  K A
Sbjct: 894 HVKCGEVKKIA 904



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 223/454 (49%), Gaps = 8/454 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           +V   C+ G V  A +   EM   G   +  +Y  ++     +G +  A+  L  M +RG
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWT 312
            + +  TLTLLI  +C +     +++A ++L EM R +G   + Y + VLIDG C+    
Sbjct: 284 ILRNKVTLTLLIKGYCRQC---KLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKM 340

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A RL  +++     + N+    A+I+GYCK  +++ AE LL RM +  L P + +Y++
Sbjct: 341 DDAVRLRDEMLNV-GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYST 399

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           L+ G C+ G   +A  + + M + G   N+  +N+++ GLC+ G  ++A  +     +R 
Sbjct: 400 LMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRG 459

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  D+++Y  LL    K  E  +AL L+  ++  G     +A+ T+I  FC+ +KM E+E
Sbjct: 460 VTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAE 519

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F      G  P   TY ++I GY + GN+  A K  ++M +    P    Y +LI GL
Sbjct: 520 ETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGL 579

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            K  K  E       M  KG+SP  VT  TL   +C +G    A      + +K +   V
Sbjct: 580 FKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNV 639

Query: 613 ---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
              + ++  L    R+  A +   K++  D  +D
Sbjct: 640 IICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLD 673



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 38/426 (8%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           + R+      M++ F ++ ++ E       M   G      T   ++   C+LG VE A 
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +V ++M    +      Y  ++    +  +  E    LS M  +G   +  T   LI  +
Sbjct: 555 KVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGW 614

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           CD+G    + +AF    +M+ KG+ PNV   + ++  L + G  ++A  L  K+V  D +
Sbjct: 615 CDEG---RLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVF 671

Query: 329 K----------------------------------PNVHTYTAMISGYCKEEKMNRAEML 354
                                              PN   Y   I+G CK  K++ A+ +
Sbjct: 672 LDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKI 731

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              +  +G  P+  TY +LI+G+   GN   A+ L D M K G  PNI  YNA+I+GLCK
Sbjct: 732 FSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCK 791

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
            G +  A +L  K   + L  + I+Y IL+  + K   T++AL L  +M+K G++P +  
Sbjct: 792 SGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLIT 851

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           Y+ LI  FC+Q  M ++     E            +  ++ G+++ G +    K    M+
Sbjct: 852 YSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMH 911

Query: 535 -QIGCA 539
             I CA
Sbjct: 912 ITIPCA 917



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 200/453 (44%), Gaps = 44/453 (9%)

Query: 154 EVMQC-MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           EV  C ++    ++G      ++  ++   G    T   N ++   C++  +  AEE F+
Sbjct: 464 EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFN 523

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL--TLLITAFCD 270
            M   G   D  +Y+ ++  YC++G V EA + +   +++ AIL +  L  +L+   F  
Sbjct: 524 RMKELGFEPDGVTYRTLIDGYCKLGNVEEAFK-VKEKMEKEAILPSIELYNSLIGGLFKS 582

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           K  R    +  +LL EM  KG  PNV T+  LI G C +G  +KAF  +  ++    + P
Sbjct: 583 KKTR----EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEK-GFAP 637

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL--------------------------- 363
           NV   + ++S   +  +++ A MLL++M    +                           
Sbjct: 638 NVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTL 697

Query: 364 --------LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
                   LPN+  Y   I G CK G  + A  +   +   G +P+ + Y  +I G    
Sbjct: 698 DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAA 757

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G V +A+ L  +  +R L  + ITY  L++   K     +A  LF ++   GL P++ +Y
Sbjct: 758 GNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISY 817

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             LI  +C+    +E+     + +  G+ P+  TY+++I G+ + G++  A      M +
Sbjct: 818 NILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +    +   +  L+ G  K  ++ +  + +  M
Sbjct: 878 LFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 167/358 (46%), Gaps = 9/358 (2%)

Query: 321 KLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           +LVR  +++K +   +  ++  YC++  +  A  + + M + G +P+  +   L+    +
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G    A  + D + + G  P+++  + +++  CK G V  A + +K+      + + +T
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-A 498
           Y  L+   +   + ++A  +   M + G+  +    T LI  +CRQ K++E+EK  +E  
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            + G+   +  Y  +I GY R   +  AV+    M  +G   +     ALI+G CK  ++
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTL 615
            EA +    M+   + P   +  TL   +C++G    A+ +   + +   +  + T N+L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
           ++ LC       A   +H +L +    D VS   L +  ++  ++    AL++D+  R
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 215/457 (47%), Gaps = 11/457 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++ A E+F  M  RG+  D  +Y  ++  Y + G +    +  S  L +G  LD 
Sbjct: 189 CKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 248

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              +  I  +   G+   +  AF++ + M+ +G  PNV T+T+LI GLC+ G   +AF +
Sbjct: 249 VVFSSTIDVYVKFGY---LTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGI 305

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++++    +P+V TY+++I G+CK   +     L E M + G  P+   Y  L+ G C
Sbjct: 306 YCQILKR-GLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLC 364

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A         +   PN+  +N++IDG C+  R  EA ++ +      ++ D  
Sbjct: 365 KQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVA 424

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T T L+   + +   K+ L LF RM K GL PD  A+ TL+ AFC+  K     + F + 
Sbjct: 425 TITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLF-DL 483

Query: 499 ITAGLFPTKETYTSMICGYLRDG-NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           +     P      +++   L  G ++  A K+F  + +    PD +TY  +I G C   +
Sbjct: 484 MQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRR 543

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
           LDEA + +E +      P  VT   L +  CK  D   A+ I+        I + + +I 
Sbjct: 544 LDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPS-----IISYSIIID 598

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            LC   RV  A   FH+ +      D V+ A L   C
Sbjct: 599 GLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGC 635



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 209/483 (43%), Gaps = 47/483 (9%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G  +RA E+ + M               +  + + G L  G  +  +  + G+ L     
Sbjct: 192 GEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 251

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           +  + +  + G +  A +V+  M  +G+  +  +Y +++   C+ GR+ EA      +L 
Sbjct: 252 SSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILK 311

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG      T + LI  FC     G+++  F L E+M++ G+ P+V  + VL+DGLCK+G 
Sbjct: 312 RGLEPSVVTYSSLIDGFCK---YGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGL 368

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A R  +K +   + +PNV  + ++I G+C+  + + A  +   M   G+ P+  T T
Sbjct: 369 MLHALRFSVKTL-GQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATIT 427

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +L+      G  +    L   M K G  P+  A+  ++D  CK  +     +L     + 
Sbjct: 428 TLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRN 487

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
           ++ AD     ++++   K    ++A   F  +++  + PDI  Y T+I  +C  +++ E+
Sbjct: 488 KIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEA 547

Query: 492 EKFFQEAITAGLFPTKETYTSMI---C------------------------GYLRDGNIS 524
            + F+        P   T T +I   C                        G  + G + 
Sbjct: 548 ARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVD 607

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A   F +       PD + Y  LI G CK  +L EA   YE M+  G+ P ++ +  L+
Sbjct: 608 EATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 667

Query: 585 YEY 587
            EY
Sbjct: 668 -EY 669



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 199/404 (49%), Gaps = 12/404 (2%)

Query: 273 FRGSIKQAFELLEEMVRKGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           F G    +F+   ++ R G  P  V  H  ++D L +KG   KA   F +LV    ++ +
Sbjct: 88  FDGQRSDSFD---KLCRGGTVPFGVSAHGFVLDALFRKGEVTKALD-FHRLVMERGFRVD 143

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + +   ++ G    +++  A  +L  + + G  PN  T+ +LI G CK G  +RA++L  
Sbjct: 144 IVSCNKILKGL-SVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFK 202

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           +M + G  P++ AY+ +IDG  K G +   ++L  +A  + ++ D + ++  +  ++K  
Sbjct: 203 VMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFG 262

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A  ++ RM+  G++P++  YT LI   C+  ++ E+   + + +  GL P+  TY+
Sbjct: 263 YLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYS 322

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           S+I G+ + GN+ S    ++ M ++G  PD + YG L+ GLCKQ  +  A +F    +G+
Sbjct: 323 SLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQ 382

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMA 628
            I P  V   +L   +C+      A+ +   +     K  + T+ TL+R    E R+   
Sbjct: 383 SIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEG 442

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYAL---FSDLSQR 669
              F ++       D V+   L +A  ++ K  +     DL QR
Sbjct: 443 LFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQR 486


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 207/458 (45%), Gaps = 50/458 (10%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G   E   +  EM + G+     T N +    C+ G +E+AE++ DEM   G+    S +
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 227 KLMVVAYCR-MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
             +V  + R  GR+    R +  ML R    ++A +T  I   C  G     ++A E+  
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH---EEAAEIWF 446

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +++ KG   NV T   LI GLC+    ++A ++   +V S   + +  TY  MI G CK 
Sbjct: 447 QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS-GVELDRITYNIMIQGCCKA 505

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            KM+ A  L + M ++G  P+  T+   ++ +C +G  E    L+D M  EG  P+I  Y
Sbjct: 506 SKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTY 565

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
             IIDG CK   + +A E L +  +  L+ + + Y  L+  + +      A+G+   M  
Sbjct: 566 GTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKY 625

Query: 466 AGLNP-------------------------------DIH----AYTTLIAAFCRQKKMKE 490
            G+ P                               DI      YT +I  FC+  K+ E
Sbjct: 626 NGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDE 685

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +  +F+E  + G+ P K TYT+++  Y + GN   A K F  M  +G  PD+++Y  LIS
Sbjct: 686 AVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
           G C+   LD+  +          SP E++   L  + C
Sbjct: 746 GFCEVDSLDKMVE----------SPAEMSSQVLKQDGC 773



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 219/535 (40%), Gaps = 76/535 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+ +    G +   F+M+ E+  +G+     T N ++   C+ G VE A  +   M    
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     ++ +++    R  +  E    L  M   G   +      +I   C KG      
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH---CS 333

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA----------------------- 315
           +A +L +EMV KG K  V T+ ++   LCK+G  E A                       
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 316 ---------FRLFLKLVR---SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
                      L L+L+R   +   KPN    TA I   CK  K   A  +  ++  +GL
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N  T  +LI+G C+  N + A  ++  M   G   +   YN +I G CK  ++ EA +
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L     +R  + D  T+ I L  +    + ++ L L  +M   GL PDI  Y T+I  +C
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           + K M ++ ++  E +  GL P    Y ++I GY R+GNIS A+     M   G  P  +
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 544 TYGAL-----------------------------------ISGLCKQSKLDEACQFYESM 568
           TY +L                                   I G CK  K+DEA  +++ M
Sbjct: 634 TYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 693

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLC 620
             +GI P ++T  TL + Y K G+   A  + + +     +    + NTLI   C
Sbjct: 694 HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 208/433 (48%), Gaps = 20/433 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV--------SSFAEI--------GRLKEGFSMVIEM 179
           Y + A +L   G  E A +++  M+        S F  +        GRL     ++ EM
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREM 413

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
               L    + +   +   C+ G  E A E++ ++  +G+  + ++   ++   C+   +
Sbjct: 414 LARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNM 473

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            EA + L AM++ G  LD  T  ++I   C       + +A +L ++M+++G+KP+++T 
Sbjct: 474 KEATKVLKAMVNSGVELDRITYNIMIQGCCKAS---KMDEAIQLRDDMIKRGFKPDLFTF 530

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            + +   C  G  E+   L L  ++S+  KP++ TY  +I GYCK + M++A   L  + 
Sbjct: 531 NIFLHTYCNLGKVEEILHL-LDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM 589

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           + GL PN   Y +LI G+ + GN   A  ++D M   G  P    YN+++  +C  G V+
Sbjct: 590 KNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVE 649

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           E   +  +   ++++   I YTI++    K  +  +A+  F  M   G+ P+   YTTL+
Sbjct: 650 EVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLM 709

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
            A+ +    +E+ K F E ++ G+ P   +Y ++I G+    ++   V+    M+     
Sbjct: 710 FAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLK 769

Query: 540 PDNITYGALISGL 552
            D  +Y A + G+
Sbjct: 770 QDGCSYNAFVDGI 782



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 204/476 (42%), Gaps = 46/476 (9%)

Query: 167 GRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEM-CARGVCADAS 224
           G L       +E++  G  P I +    V  + C  G ++ A +VF EM   + V  D  
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCG-GQLDVARKVFGEMRDGKTVAPDVH 212

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  M+ A CR G +  A                                      F +L
Sbjct: 213 TYTAMIKALCRAGEIDAA--------------------------------------FAML 234

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            E+ R G +P V T+ VL+D LCK G  E+AFRL  ++V     +P++ T+  +ISG  +
Sbjct: 235 AELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG-RVRPSIVTFGILISGLAR 293

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            ++      +L+ M+  G+ PN   Y  +I  HC+ G+   A  L D M  +G    +  
Sbjct: 294 GQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVT 353

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-QAETKQALGLFCRM 463
           YN I   LCK+G ++ A ++L +     +      +  +++ HL+        L L   M
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREM 413

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +   L P+    T  I   C+  K +E+ + + + +  GL     T  ++I G  +  N+
Sbjct: 414 LARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNM 473

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A K  + M   G   D ITY  +I G CK SK+DEA Q  + MI +G  P   T    
Sbjct: 474 KEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIF 533

Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
            + YC  G     + +L+ +     K  I T  T+I   C  K +  A  +  +L+
Sbjct: 534 LHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM 589



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 183/382 (47%), Gaps = 7/382 (1%)

Query: 254 AILDN---ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           AI D+   AT  LL+ A  +    GS+ +A +   E+  +G  P++ T ++L++ L   G
Sbjct: 130 AIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGG 189

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             + A ++F ++       P+VHTYTAMI   C+  +++ A  +L  ++  G+ P   TY
Sbjct: 190 QLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTY 249

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
             L+   CK G  E A+ L   M +    P+I  +  +I GL +  +  E   +L++   
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQG 309

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             +  +++ Y  ++  H ++    +AL LF  MV  G+   +  Y  +  A C++ +M+ 
Sbjct: 310 FGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 369

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRD-GNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +EK   E + AG+      + S++  +LR  G +   ++  + M      P++    A I
Sbjct: 370 AEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACI 429

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKK 606
             LCK  K +EA + +  ++GKG+     T   L +  C+  +   A  +L+++     +
Sbjct: 430 QELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVE 489

Query: 607 LWIRTVNTLIRKLCSEKRVGMA 628
           L   T N +I+  C   ++  A
Sbjct: 490 LDRITYNIMIQGCCKASKMDEA 511


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 209/422 (49%), Gaps = 7/422 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + GR  E   +   MT N       T + ++   CE G ++ A  V+ E+    
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 219 VCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           +  DA ++  M+  +CR G++ E+ + W+  ++ +       +  +LI    +    G +
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWM--VMGKENCQTVVSYNILIKGLFE---NGKV 377

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A  + E + +KG +P   T+ VLI GLCK G   KA ++F K       K + + Y++
Sbjct: 378 EEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF-KEAEDGPGKLDAYAYSS 436

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           M+ G CKE +M+ A  ++ +M ++G   + +    LI G  +    E A +    M  +G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+P I +YN +I GLCK  R  EAY  +K+  ++E + D IT ++L+    ++ + + AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+ + +  G  PDI  Y  L+   C   K++++ + +     +   P   T  +++ G 
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +  +   A + +  + + G  PD I+Y   I GLC  S++ +A +F    + +GI P  
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676

Query: 578 VT 579
           VT
Sbjct: 677 VT 678



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 10/388 (2%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR-WLS 247
           + +N +V +   LG    A +VFDEM  RGV AD + Y +++  + + G   +    W  
Sbjct: 191 TLINGMVKVGDLLG----ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWER 246

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            + D     +  T  ++I   C     G   ++ E+ E M +   + +++T++ LI GLC
Sbjct: 247 LVKDCSVYPNVVTYNIMINGLCKC---GRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           + G  + A R++ ++V S      V T+ AM++G+C+  K+  +  L   M ++      
Sbjct: 304 EAGNIDGAVRVYKEIVESSLVVDAV-THNAMLNGFCRAGKIKESFELWMVMGKEN-CQTV 361

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y  LI G  + G  E A  + +L+ K+GC P    Y  +I GLCK GR+ +A ++ K+
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A     + D   Y+ ++    K+    +A+ +  +M K G   D H    LI  F R  K
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++++  FF+E    G  PT  +Y ++I G  +    S A  + + M +    PD IT   
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISP 575
           L+ GLC++ K++ A   ++  + KG  P
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKP 569



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 217/480 (45%), Gaps = 36/480 (7%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++    EL   + AE       +  V  +  +Y +++   C+  ++ +A   L  M
Sbjct: 118 SYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWM 177

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +    D  +   LI         G +  A ++ +EM  +G   +V  + +LIDG  K 
Sbjct: 178 WSQNLKPDVFSYGTLINGMVK---VGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKH 234

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +K   ++ +LV+  +  PNV TY  MI+G CK  + + +  + ERM +     +  T
Sbjct: 235 GDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI+G C+ GN + A  +   + +     +   +NA+++G C+ G+++E++EL     
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMG 354

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +   Q   ++Y IL+    +  + ++A+ ++  + K G  P+   Y  LI   C+  ++ 
Sbjct: 355 KENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLN 413

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++ K F+EA           Y+SM+ G  ++G +  A+    +M++ G   D      LI
Sbjct: 414 KALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLI 473

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +G  + SKL++A  F+  M  KG SP                                 I
Sbjct: 474 NGFVRASKLEDAINFFREMECKGCSPT--------------------------------I 501

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            + NTLI+ LC  +R   A  F  ++L K+   D ++ + L +   +  K  +  +L Q+
Sbjct: 502 VSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQ 561



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 150/337 (44%), Gaps = 5/337 (1%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I    K   + KA   F  +      KP V +Y  +++ + +  + +RAE      +  
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            + PN  TY  LI   CK    E+A  L+D M  +   P++++Y  +I+G+ K G +  A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIA 480
            ++  +   R + AD   Y +L+    K  +  +   ++ R+VK   + P++  Y  +I 
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN 265

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  +  ES + ++            TY+S+I G    GNI  AV+ ++ + +     
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV 325

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D +T+ A+++G C+  K+ E+ + +  M GK      V+   L     + G    A+ I 
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVM-GKENCQTVVSYNILIKGLFENGKVEEAISIW 384

Query: 601 ESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           E L KK       T   LI  LC   R+  A   F +
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 271/590 (45%), Gaps = 31/590 (5%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLIS----NGNFERAHEV-- 155
           T++    +E+  M+A+  F         R  ++  +   T+LI     NG  + A  V  
Sbjct: 334 TLIKGFFDESKMMLAIHIFN-----EMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLY 388

Query: 156 -MQCMVSSFAEI-------GRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEY 206
            MQ      +E+       G + E FS+   M   G  P + +  N + G+ C+ G +  
Sbjct: 389 EMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGL-CKGGHLVQ 447

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A+E    +       D  +   +++  C  G + EA      M+    I D  T T+L++
Sbjct: 448 AKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLS 507

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC KG    I  A  LL+ M+ KG  P++ T+T L+ GL K+G  + A  LF +++  +
Sbjct: 508 GFCRKG---KIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKE 564

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
               +   Y +M++GY K  K+++ EM +  M +  + PN  +Y  L++GH K G+  R+
Sbjct: 565 GMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRS 624

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L   M ++G  P    Y  +I GL K G ++ A + L K     +  D++++ +L++ 
Sbjct: 625 IYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINA 684

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +++    AL LF  M    ++P    Y+ +I    R+  ++ S    ++ + +GL P 
Sbjct: 685 FSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPK 744

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y ++I    R G+I+ A +  + M  +G  P  +   +++ GL K  K++E    + 
Sbjct: 745 HTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFC 804

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEK 623
           S+I  G+ P   T  TL +  CK+   + A+    ++ES   K+ + T N LI  LC  +
Sbjct: 805 SIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQ 864

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
            V  A   + ++  K    +  +   L  A Y + +      L +D+  R
Sbjct: 865 CVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDR 914



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 226/500 (45%), Gaps = 46/500 (9%)

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGR-------LKEGF----------------SMV 176
           A   + N  F+ +      ++++  EIG        LKEG                 SM 
Sbjct: 177 AILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMC 236

Query: 177 IE------------MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
           IE            M +  LP +  T N ++    + G  + A  V ++M   GV AD  
Sbjct: 237 IEGNLKGAKHMIHKMKSCSLPNVI-TYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVY 295

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y +M+   C+M R T A   L  M       D  T   LI  F D+     +  A  + 
Sbjct: 296 TYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDE---SKMMLAIHIF 352

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM+R+G KP++ T+T LIDG C+ G  ++A R+  ++ +    KP+  TY+AM++G   
Sbjct: 353 NEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEM-QVAGVKPSEVTYSAMLNGSVH 411

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           E     A  + + M++ G  P+  TY +L+ G CK G+  +A + M  +       +   
Sbjct: 412 E-----AFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKT 466

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
            NA++ G+C  G + EA +L +K        D  TYTILLS   ++ +   A+ L   M+
Sbjct: 467 LNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMML 526

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNI 523
           + GL PDI  YT L+    ++ ++K +   FQE I   G++     Y SM+ GYL+ G +
Sbjct: 527 EKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKL 586

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
                    MNQ    P+  +Y  L+ G  K+  L  +   Y+ M+ KGI P  VT   L
Sbjct: 587 HKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLL 646

Query: 584 AYEYCKQGDSATAMIILESL 603
                K G    A+  L+ +
Sbjct: 647 ILGLSKHGMIEIAVKFLDKM 666



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 227/504 (45%), Gaps = 64/504 (12%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           + + GR K    ++ +M  NG+     T N ++   C++    +A  +   M    +  D
Sbjct: 269 YVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPD 328

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG---------- 272
             +Y  ++  +    ++  A    + ML +G     AT T LI  +C  G          
Sbjct: 329 ECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLY 388

Query: 273 -----------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK------- 308
                              GS+ +AF + + M + G  P+VYT+  L+ GLCK       
Sbjct: 389 EMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQA 448

Query: 309 ----------------------------KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
                                        G  ++A  L  K+V + N+ P++HTYT ++S
Sbjct: 449 KEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMV-TINFIPDIHTYTILLS 507

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA-YDLMDLMGKEGCT 399
           G+C++ K+  A +LL+ M E+GL+P+  TYT L+ G  K G  + A Y   +++ KEG  
Sbjct: 508 GFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMY 567

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +  AYN++++G  K G++ +    +    Q ++  +  +Y IL+  H+K+    +++ L
Sbjct: 568 ADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYL 627

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           +  MV+ G+ P    Y  LI    +   ++ + KF  + +  G++P + ++  +I  +  
Sbjct: 628 YKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSE 687

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A++ F  M  +  +P + TY A+I+GL +++ L  +C     M+  G+ P    
Sbjct: 688 KSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTH 747

Query: 580 RVTLAYEYCKQGDSATAMIILESL 603
            + L    C+ GD   A  + E +
Sbjct: 748 YIALINAKCRFGDINGAFRLKEEM 771



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 188/389 (48%), Gaps = 49/389 (12%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK--LVRSDNYKPNVHTYTAMISGYCKEEKM 348
           G+K + +    +++ L + G ++  +  FLK  LVR   +  +V T   +++  C E  +
Sbjct: 185 GFKASAHACNAVLNALVEIGESKHVW-FFLKEGLVRK--FPLDVTTCNIVLNSMCIEGNL 241

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
             A+ ++ +MK   L PN  TY ++++ + K G F+ A  +++ M K G   ++Y YN +
Sbjct: 242 KGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIM 300

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           ID LCK  R   AY LLK+     L  D+ TY  L+     +++   A+ +F  M++ GL
Sbjct: 301 IDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGL 360

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P +  YTTLI  +CR   + E+ +   E   AG+ P++ TY++M+     +G++  A  
Sbjct: 361 KPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML-----NGSVHEAFS 415

Query: 529 YFQRMNQIGCAPDNITYGALISGLCK-----QSK-------------------------- 557
            +  M + GC+PD  TY  L+ GLCK     Q+K                          
Sbjct: 416 VYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGIC 475

Query: 558 ----LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
               LDEA    E M+     P   T   L   +C++G    A+I+L+ + +K  +  + 
Sbjct: 476 NHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIV 535

Query: 614 T---LIRKLCSEKRVGMAALFFHKLLGKD 639
           T   L++ L  E +V  A+  F +++ K+
Sbjct: 536 TYTCLLKGLIKEGQVKAASYLFQEIICKE 564



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 200/419 (47%), Gaps = 7/419 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEM-CA 216
           ++S F   G++     ++  M   GL P I +    + G+  E G V+ A  +F E+ C 
Sbjct: 505 LLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKE-GQVKAASYLFQEIICK 563

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+ AD  +Y  M+  Y + G++ + +  +  M       + A+  +L+     KG    
Sbjct: 564 EGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGH--- 620

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + ++  L ++MVRKG KP   T+ +LI GL K G  E A +   K+V    Y P+  ++ 
Sbjct: 621 LSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIY-PDRLSFD 679

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I+ + ++ +M+ A  L   MK   + P++ TY+++I G  +    + + D++  M + 
Sbjct: 680 VLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVES 739

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P    Y A+I+  C+ G +  A+ L ++     +   ++  + ++    K  + ++ 
Sbjct: 740 GLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEG 799

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + +FC +++AG+ P I  +TTL+   C++ K+ ++        + GL     TY  +I G
Sbjct: 800 IIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITG 859

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
             +   +S A++ ++ M   G  P+  TY  L   +    +  E  +    +  +G+ P
Sbjct: 860 LCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVP 918



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 4/348 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++ + + G+L +    + +M  N +    ++ N ++    + G +  +  ++ +M  +G
Sbjct: 576 MMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG 635

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y+L+++   + G +  A ++L  M+  G   D  +  +LI AF +K     + 
Sbjct: 636 IKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKS---RMS 692

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L   M      P+  T++ +I+GL +K W + +  +   +V S   +P    Y A+
Sbjct: 693 DALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVES-GLEPKHTHYIAL 751

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C+   +N A  L E M   G++P     +S++ G  K G  E    +   + + G 
Sbjct: 752 INAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGM 811

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P I  +  ++ GLCK+ ++ +A  L        L+ D +TY +L++   K      AL 
Sbjct: 812 VPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALE 871

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           L+  M   GL P++  YTTL  A     +  E EK   +    GL P+
Sbjct: 872 LYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 187/347 (53%), Gaps = 7/347 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  R+ +   +V +M   G        N ++  +C++GLV  A E+FD M   G
Sbjct: 86  LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V ADA +Y  +V   C  GR ++A R +  M+ R  + +  T T +I  F  +G      
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG---KFS 202

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L EEM R+   P+V+T+  LI+GLC  G  ++A +  L L+ +    P+V TY  +
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA-KQMLDLMVTKGCLPDVVTYNTL 261

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK ++++    L   M ++GL+ +T TY ++I G+ + G  + A ++   M     
Sbjct: 262 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 319

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  Y+ ++ GLC   RV++A  L +   + E++ D  TY I++    K    + A  
Sbjct: 320 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 378

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           LF  +   GL PD+ +YTT+I+ FCR+++  +S+  +++    GL P
Sbjct: 379 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 7/384 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+   C       A  V  +M   G   D  +   ++  +C+  RV +A   +S M +
Sbjct: 49  NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 108

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   D      +I   C  G    +  A EL + M R G + +  T+  L+ GLC  G 
Sbjct: 109 MGFRPDVVIYNTIIDGSCKIGL---VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 165

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A RL   +V  D   PNV T+TA+I  + KE K + A  L E M  + + P+  TY 
Sbjct: 166 WSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           SLI G C  G  + A  ++DLM  +GC P++  YN +I+G CK  RV E  +L ++  QR
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  D ITY  ++  + +      A  +F RM      P+I  Y+ L+   C   +++++
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKA 341

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
              F+    + +     TY  +I G  + GN+  A   F+ ++  G  PD ++Y  +ISG
Sbjct: 342 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 401

Query: 552 LCKQSKLDEACQFYESMIGKGISP 575
            C++ + D++   Y  M   G+ P
Sbjct: 402 FCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 7/381 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F  M   G+  D  SY +++   CR  R   A   +  M+  G   D  T++ LI  FC
Sbjct: 32  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 91

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
            +G R  +  A +L+ +M   G++P+V  +  +IDG CK G    A  LF ++ R D  +
Sbjct: 92  -QGNR--VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVR 147

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +  TY ++++G C   + + A  L+  M  + ++PN  T+T++I    K G F  A  L
Sbjct: 148 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 207

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +    P+++ YN++I+GLC  GRV EA ++L     +    D +TY  L++   K
Sbjct: 208 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 267

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +   LF  M + GL  D   Y T+I  + +  +   +++ F    +    P   T
Sbjct: 268 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 324

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+ ++ G   +  +  A+  F+ M +     D  TY  +I G+CK   +++A   + S+ 
Sbjct: 325 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384

Query: 570 GKGISPCEVTRVTLAYEYCKQ 590
            KG+ P  V+  T+   +C++
Sbjct: 385 CKGLKPDVVSYTTMISGFCRK 405



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 183/374 (48%), Gaps = 7/374 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L   M   G   ++Y++ ++I+ LC+      A  +  K+++   Y+P+V T +++I
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLI 87

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G+C+  ++  A  L+ +M+E G  P+   Y ++I G CK+G    A +L D M ++G  
Sbjct: 88  NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 147

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            +   YN+++ GLC  GR  +A  L++    R++  + IT+T ++   +K+ +  +A+ L
Sbjct: 148 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 207

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           +  M +  ++PD+  Y +LI   C   ++ E+++     +T G  P   TY ++I G+ +
Sbjct: 208 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 267

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +    K F+ M Q G   D ITY  +I G  +  + D A + +  M  +   P   T
Sbjct: 268 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 324

Query: 580 RVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L Y  C       A+++ E++ K   +L I T N +I  +C    V  A   F  L 
Sbjct: 325 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384

Query: 637 GKDQNVDRVSLAAL 650
            K    D VS   +
Sbjct: 385 CKGLKPDVVSYTTM 398



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 142/350 (40%), Gaps = 70/350 (20%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI--------------- 408
           LP+   ++ ++    K  N++    L   M   G   ++Y+YN +               
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 409 --------------------IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
                               I+G C+  RV +A +L+ K  +   + D + Y  ++    
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K      A+ LF RM + G+  D   Y +L+A  C   +  ++ +  ++ +   + P   
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+T++I  ++++G  S A+K ++ M +    PD  TY +LI+GLC   ++DEA Q  + M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 569 IGKGISPCEVTRVTLAYEYCKQ-------------------GDSAT-------------- 595
           + KG  P  VT  TL   +CK                    GD+ T              
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 596 --AMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             A  I   +D +  IRT + L+  LC   RV  A + F  +   +  +D
Sbjct: 307 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 9/218 (4%)

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+++   P I  ++ +++   + K        F      G+     +Y  +I    R   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
              A+    +M + G  PD +T  +LI+G C+ +++ +A      M   G  P  V   T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           +    CK G    A+ + + +++   +R    T N+L+  LC   R   AA     ++ +
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 639 DQNVDRVSLAALKNACYESNKYA----LFSDLSQRIAE 672
           D   + ++  A+ +   +  K++    L+ ++++R  +
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 25/368 (6%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V   C+ GRV +A R L  M   G  L+      L+  +  +   G +++  E++E  
Sbjct: 136 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN- 194

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G +  V T+T+L+D L       K   LF ++ +++N   +V+ YTA+I+ YC+   
Sbjct: 195 --EGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCRAGN 251

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           M RA  +L+     G+ PN  TY  LI G CK+G  E A  L+  M  +G   N   +N 
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 408 IIDGLCKKGRVQEAYELLKKAFQR---ELQ-----------------ADKITYTILLSEH 447
           +IDG C+KG V +A ++ K A ++   EL                   + +TYT L+S H
Sbjct: 312 MIDGYCRKGMVDDALKI-KAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIH 370

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +  +A  LF  M + G  P +  Y+ +I  + ++ +++E+E+F +E    G  P  
Sbjct: 371 CKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDV 430

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY S++ G+  +G +  A+K F+ M Q G  P+ + Y ALISGL K+ + + A Q Y+ 
Sbjct: 431 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 490

Query: 568 MIGKGISP 575
           M+  G+ P
Sbjct: 491 MLKAGLIP 498



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 177/388 (45%), Gaps = 29/388 (7%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM---GRVTEADRWLSAML 250
           VV   C+ G V+ A  + D+M   GV  +A  Y  ++  Y R    GRV E    L  M 
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE---ILEIME 193

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           + G      T T+L+ +         I +   L  EM       +VY +T +I+  C+ G
Sbjct: 194 NEGIEATVGTYTILVDSLSTAR---DISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 250

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
              +A ++  + V  +  +PN  TY  +I G+CK  +M  AEMLL  M+ QG+  N   +
Sbjct: 251 NMRRAAKVLDECV-GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 309

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC----------------- 413
            ++I G+C+ G  + A  +   M K G   NIY YN +  GLC                 
Sbjct: 310 NTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISI 369

Query: 414 --KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
             K G + EA  L ++  ++      +TY++++  + K+   ++A      M K G  PD
Sbjct: 370 HCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPD 429

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           ++ Y +L+   C   K+  + K F+E    G  P    YT++I G  ++G   +A + + 
Sbjct: 430 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 489

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLD 559
            M + G  PD+  Y AL+  L   ++ D
Sbjct: 490 DMLKAGLIPDDSLYSALVGSLHTDNRKD 517



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 175/385 (45%), Gaps = 36/385 (9%)

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           RH + L  +C  SL            + C V    + GR++E   +   M N G+     
Sbjct: 159 RHGVSLNALCYNSL------------LDCYVRQ-KDDGRVQEILEI---MENEGIEATVG 202

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   +V        +   E +F+EM A  V  D   Y  ++ AYCR G +  A + L   
Sbjct: 203 TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC 262

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +  G   +  T  +LI  FC  G    ++ A  LL +M  +G   N      +IDG C+K
Sbjct: 263 VGNGVEPNERTYGVLIKGFCKIG---QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRK 319

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  + A ++   + +    + N++TY  +  G C+                 G++PN  T
Sbjct: 320 GMVDDALKIKAAMEKI-GVELNIYTYNTLACGLCR----------------MGVVPNYVT 362

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+LI  HCK G+   A  L   M ++G TP++  Y+ +I G  KKGR++EA    K+  
Sbjct: 363 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEME 422

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++    D  TY  L+  H    +   AL LF  M + G  P++ AYT LI+   ++ + +
Sbjct: 423 KKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSE 482

Query: 490 ESEKFFQEAITAGLFPTKETYTSMI 514
            + + + + + AGL P    Y++++
Sbjct: 483 AAFQLYDDMLKAGLIPDDSLYSALV 507



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 32/329 (9%)

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK---GRVQEAYELLKKAF 429
           ++ G CK G  + A  L+D M + G + N   YN+++D   ++   GRVQE  E+++   
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIME--- 193

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              ++A   TYTIL+       +  +   LF  M    +  D++ YT +I A+CR   M+
Sbjct: 194 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 253

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + K   E +  G+ P + TY  +I G+ + G + +A      M   G   + I +  +I
Sbjct: 254 RAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 313

Query: 550 SGLCKQSKLDEACQFYESM--IG-----------------KGISPCEVTRVTLAYEYCKQ 590
            G C++  +D+A +   +M  IG                  G+ P  VT  TL   +CK 
Sbjct: 314 DGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKD 373

Query: 591 GDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           GD   A  +   + +K     + T + +I     + R+  A  F  ++  K    D  + 
Sbjct: 374 GDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTY 433

Query: 648 AALKNACYESNKY----ALFSDLSQRIAE 672
           A+L +    + K      LF ++ QR  E
Sbjct: 434 ASLVHGHCVNGKVDVALKLFEEMKQRGTE 462



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 3/221 (1%)

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           +A + ++DGLCK GRV +A  LL    +  +  + + Y  LL  +++Q +  +   +   
Sbjct: 132 FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+   +  YT L+ +    + + + E  F E     +      YT++I  Y R GN
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A K        G  P+  TYG LI G CK  +++ A      M G+G+   ++   T
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 583 LAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC 620
           +   YC++G    A+ I  +++K   +L I T NTL   LC
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLC 352


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 198/396 (50%), Gaps = 14/396 (3%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A ++ E M+  G++P+++  TVL++ L K   T+  ++++ K+ R    + N+H Y  
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARI-GVEANIHVYNV 205

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I   CK   + +A+ LL  M+ + + P+  TY +LI  +CK G    A  + D M +EG
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  YN++I G CK+GR++EA  L K+   R+   + +TYT L+  + +  +  QAL
Sbjct: 266 IKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQAL 323

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   GL P +  Y +++   C   +++++ K   E     + P   T  ++I  Y
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAY 383

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G++ SA+K   RM + G   D  TY ALI G CK  ++D A +   SM+  G SP  
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSY 443

Query: 578 VTRVTLAYEYCKQGDSATAMIILES-------LDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
            T   L   YC Q +    + + +        +DK L+      LIR+ C  ++V  A  
Sbjct: 444 CTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLY----RALIRRFCKREQVDYAKK 499

Query: 631 FFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            F  +  K    D V   +L  A ++  K    SDL
Sbjct: 500 IFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDL 535



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 187/345 (54%), Gaps = 6/345 (1%)

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI A C  G    +++A  LL EM  K   P+++T+  LI   CKKG   +A  +  +
Sbjct: 204 NVLIHACCKSG---DVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 260

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           + R +  KP++ TY ++I G+CKE +M  A  L + +++    PN  TYT+LI G+C++ 
Sbjct: 261 MER-EGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLN 317

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           + ++A  L + M  +G  P +  YN+I+  LC+ GR+++A +LL +  +++++ D +T  
Sbjct: 318 DLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCN 377

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L++ + K  + K AL +  RMV+AGL  D   Y  LI  FC+ ++M  +++     + A
Sbjct: 378 TLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDA 437

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G  P+  TY+ ++ GY    N  + +K      + G   D   Y ALI   CK+ ++D A
Sbjct: 438 GFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYA 497

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            + +  M  KG     V   +LAY Y K G +  A  +L+ + K+
Sbjct: 498 KKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKR 542



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 203/440 (46%), Gaps = 6/440 (1%)

Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
           +R F+    V +  +  + + +    V   +V  +A     +E   +   M  NG     
Sbjct: 106 YRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHL 165

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
                ++    +  L +   +V+ +M   GV A+   Y +++ A C+ G V +AD  LS 
Sbjct: 166 HACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSE 225

Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           M  +    D  T   LI+ +C KG      +A  + + M R+G KP++ T+  LI G CK
Sbjct: 226 MESKCVFPDLFTYNTLISLYCKKGMH---YEALSVQDRMEREGIKPDIVTYNSLIHGFCK 282

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           +G   +A RLF K +R  +  PN  TYT +I GYC+   +++A  L E M+ QGL P   
Sbjct: 283 EGRMREAMRLF-KEIR--DATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVV 339

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY S++   C++G    A  L++ M ++   P+    N +I+  CK G ++ A ++  + 
Sbjct: 340 TYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRM 399

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            +  L+ D+ TY  L+    K  E   A  L   M+ AG +P    Y+ L+  +C Q+  
Sbjct: 400 VEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNE 459

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           +   K   E +  GL   K  Y ++I  + +   +  A K F  M + G   D++ Y +L
Sbjct: 460 EAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSL 519

Query: 549 ISGLCKQSKLDEACQFYESM 568
                K  K + A    + M
Sbjct: 520 AYAYWKLGKANAASDLLDEM 539



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 10/291 (3%)

Query: 315 AFRLFLK-------LVR-SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           A+R FL        LVR  D+   N H ++ ++  Y   +    A  + E M   G  P+
Sbjct: 105 AYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPH 164

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
            +  T L+    K    +  + +   M + G   NI+ YN +I   CK G V++A  LL 
Sbjct: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLS 224

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +   + +  D  TY  L+S + K+    +AL +  RM + G+ PDI  Y +LI  FC++ 
Sbjct: 225 EMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEG 284

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +M+E+ + F+E   A   P   TYT++I GY R  ++  A++  + M   G  P  +TY 
Sbjct: 285 RMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           +++  LC+  ++ +A +    M  K I P  VT  TL   YCK GD  +A+
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSAL 393



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 11/386 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +  + G +++  +++ EM +  +     T N ++ + C+ G+   A  V D M
Sbjct: 202 VYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRM 261

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  +Y  ++  +C+ GR+ EA R    +  R A  ++ T T LI  +C     
Sbjct: 262 EREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCR---L 316

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + QA  L EEM  +G  P V T+  ++  LC+ G    A +L L  +     +P+  T
Sbjct: 317 NDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL-LNEMSEKKIEPDNVT 375

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
              +I+ YCK   M  A  +  RM E GL  +  TY +LI+G CK+   + A +L+  M 
Sbjct: 376 CNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSML 435

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G +P+   Y+ ++DG C +   +   +L  +  ++ L  DK  Y  L+    K+ +  
Sbjct: 436 DAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVD 495

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F  M + G   D   YT+L  A+ +  K   +     E     L  T + Y ++ 
Sbjct: 496 YAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALN 555

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAP 540
             Y  D +I S        N +  AP
Sbjct: 556 ASYAGDNSILSLF-----WNHVVAAP 576



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 27/332 (8%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           NYK ++ +   MI    K + +  A+ LLE++  +  L   +  ++L+          R 
Sbjct: 73  NYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALV----------RL 122

Query: 387 YDLMDLMGKEGCTPNIYAYNAII--DGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           +D  D+        +++++  I+  +   K+  +Q    ++   F+  L A     T+LL
Sbjct: 123 HDDPDI------NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA----CTVLL 172

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           +   K   T     ++ +M + G+  +IH Y  LI A C+   +++++    E  +  +F
Sbjct: 173 NSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVF 232

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY ++I  Y + G    A+    RM + G  PD +TY +LI G CK+ ++ EA + 
Sbjct: 233 PDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRL 292

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCS 621
           ++ +  +  +P  VT  TL   YC+  D   A+ + E ++ +    TV   N+++RKLC 
Sbjct: 293 FKEI--RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCE 350

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
             R+  A    +++  K    D V+   L NA
Sbjct: 351 IGRIRDANKLLNEMSEKKIEPDNVTCNTLINA 382



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 145/317 (45%), Gaps = 18/317 (5%)

Query: 97  HEQAITVVASLANEAGSMVALSFFYWAIGFAK---FRHFMRLY--IVCATSLISNGNFER 151
           H +A++V   +  E      +++     GF K    R  MRL+  I  AT          
Sbjct: 251 HYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATP--------- 301

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
            H     ++  +  +  L +   +  EM   GL     T N ++   CE+G +  A ++ 
Sbjct: 302 NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLL 361

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           +EM  + +  D  +   ++ AYC++G +  A +  + M++ G  LD  T   LI  FC  
Sbjct: 362 NEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKI 421

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +  A ELL  M+  G+ P+  T++ L+DG C +   E   +L  + VR      +
Sbjct: 422 ---REMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRK-GLCVD 477

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y A+I  +CK E+++ A+ +   M+E+G L ++  YTSL Y + K+G    A DL+D
Sbjct: 478 KSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLD 537

Query: 392 LMGKEGCTPNIYAYNAI 408
            M K      +  Y A+
Sbjct: 538 EMYKRRLMITLKIYRAL 554


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 192/359 (53%), Gaps = 4/359 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           +Y  ++ AYCR G + EA   +++M D+G      T   +I   C K   G   +A  +L
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKK---GRYARAKGIL 59

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            EM+  G  P+  T+  L+   C++    +A  +F +++R     P++ +++++++ + +
Sbjct: 60  IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ-GVVPDLVSFSSLMAVFSR 118

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              +++A +    MK+ GL+P+   YT L++G+C+ GN   A  + D M ++GC  ++ A
Sbjct: 119 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 178

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN I++GLCK+  + +A +L  +  +R    D  T+T L+  H +     +AL LF  M 
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +  + PDI AY TLI  FC+  +M+++ + +   I+  +FP   TY  +I  Y   G++S
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            A + +  M + G  P  +T   +I G C+     +A +F   MI KG++P  ++  TL
Sbjct: 299 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 184/358 (51%), Gaps = 4/358 (1%)

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI   C++G  E+AF + +  +     KP++ TY A+I+G CK+ +  RA+ +L  
Sbjct: 3   TYNTLIGAYCREGLLEEAFEI-MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M   GL P+T TY +L+   C+  NF  A ++   M ++G  P++ ++++++    +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A    +   +  L  D + YT+L+  + +     +AL +   M++ G   D+ AY T
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++   C++K + +++K F E +  G  P   T+T++I G+ +DGN++ A+  F  M Q  
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD + Y  LI G CK  ++++A + ++ MI + I P  +T   L   YC  G  + A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 598 IILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
            + + + +   K  + T NT+I+  C       A  F  +++ K    D +S   L N
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 19/348 (5%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G  E A E+M  M               ++   + GR      ++IEM N GL   T+T 
Sbjct: 15  GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 74

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++  +C       A+E+F EM  +GV  D  S+  ++  + R   + +A  +   M  
Sbjct: 75  NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKK 134

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G + DN   T+L+  +C     G++ +A ++ +EM+ +G   +V  +  +++GLCK+  
Sbjct: 135 FGLVPDNVIYTVLMHGYCRN---GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 191

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              A +LF ++V      P+ +T+T +I G+C++  M +A  L   M ++ + P+   Y 
Sbjct: 192 LTDADKLFDEMVERGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 250

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI G CKVG  E+A +L D M      PN   Y  +I+  C  G V EA+ L     ++
Sbjct: 251 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 310

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            ++   +T   ++  + +  ++ +A     RM+  G+ PD  +Y TLI
Sbjct: 311 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 7/239 (2%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           +TY  L+  + ++   ++A  +   M   GL P +  Y  +I   C++ +   ++    E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  GL P   TY +++    R  N S A + F  M + G  PD +++ +L++   +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNT 614
           LD+A  ++  M   G+ P  V    L + YC+ G+   A+ I + + ++   L +   NT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN---KYALFSDLSQR 669
           ++  LC EK +  A   F +++ +    D  +   L +  C + N     +LF  ++QR
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 239/513 (46%), Gaps = 53/513 (10%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + N ++   C+LG V+ A+  F  +   G+     S+ +++   C +G + EA    S M
Sbjct: 243 SFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 302

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D+ T  +L+  F      G I  A E++++M+ KG  P+V T+T+L+ G C+ 
Sbjct: 303 NKHGVEPDSVTYNILVKGF---HLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQL 359

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  +    L   ++       ++  Y+ M+SG CK  +++ A  L   ++  GL P+   
Sbjct: 360 GNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVA 419

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ +I+G CK+G F+ A  + D M  +   PN     AI+ GLC+KG + EA  LL    
Sbjct: 420 YSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLI 479

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
                 D I Y I++  + K    ++AL LF   +++G+ P++  + +LI  +C+ + + 
Sbjct: 480 SSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIA 539

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ K        GL P+  +YT+++  Y   G+I S  +  + M   G  P N+TY  + 
Sbjct: 540 EARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIF 599

Query: 550 SGLCKQSKLDEACQFYESMI------------GKGISP------------CEVTRVTLAY 585
            GLC+  KL+   Q     I             +GI+P            C V  ++ A+
Sbjct: 600 KGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAF 659

Query: 586 EYCKQ-------GDSATAMIILESL---------DKKLWI---RTVN-------TLIRKL 619
           E  K+         SAT  I+++SL         D+ L+    R V+       T+I+  
Sbjct: 660 ELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAH 719

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
           C +    MA + F++LL +  NV     +A+ N
Sbjct: 720 CVKGDPEMAVILFNQLLDRGFNVSIRDYSAVIN 752



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 244/536 (45%), Gaps = 55/536 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS+ ++G +    S    +   GL     + N ++   C +G +  A E+  +M   G
Sbjct: 247 IMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 306

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D+ +Y ++V  +  +G ++ A   +  MLD+G   D  T T+L+   C     G+I 
Sbjct: 307 VEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ---LGNID 363

Query: 279 QAFELLEEMVRKGWK-PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
               LL++M+ +G++  ++  ++V++ GLCK G  ++A  LF  L  +    P++  Y+ 
Sbjct: 364 MGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDL-EAYGLTPDLVAYSI 422

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CK  K + A  + + M  + +LPN+ T  +++ G C+ G    A  L+D +   G
Sbjct: 423 VIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSG 482

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            T +I  YN +IDG  K G ++EA EL K A +  +  +  T+  L+  + K     +A 
Sbjct: 483 DTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEAR 542

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAF----------------------------------- 482
            +   +   GL P + +YTTL+ A+                                   
Sbjct: 543 KILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGL 602

Query: 483 CRQKKMKESEKFFQEAI------------TAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           CR  K++   +  +E I            + G+ P + TY ++I    R  ++S A + F
Sbjct: 603 CRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELF 662

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++M      P + TY  LI  LC    + +A +F  S+  + +S  +    T+   +C +
Sbjct: 663 KKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVK 722

Query: 591 GDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           GD   A+I+   L  +   + IR  + +I +LC       +  FF  +L +  + D
Sbjct: 723 GDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 211/432 (48%), Gaps = 23/432 (5%)

Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
           ++G +  G  ++ +M + G  L  S +   V ++  C+ G V+ A  +F ++ A G+  D
Sbjct: 358 QLGNIDMGLILLKDMLSRGFEL-KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
             +Y +++   C++G+   A R    M  +  + ++ TL  ++   C KG    + +A  
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGM---LLEARS 473

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL+ ++  G   ++  + ++IDG  K G  E+A  LF K+       PNV T+ ++I GY
Sbjct: 474 LLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELF-KVAIESGITPNVATFNSLIYGY 532

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           CK + +  A  +L+ +K  GL+P+  +YT+L+  +   G+ +   +L   M  EG  P  
Sbjct: 533 CKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTN 592

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQ-------RELQA-----DKITYTILLSEHLKQ 450
             Y+ I  GLC+  +++   ++L++          R++++     D+ITY  ++    + 
Sbjct: 593 VTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRV 652

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A  LF +M    L+P    Y  LI + C    ++++++F        +  +K  Y
Sbjct: 653 KHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAY 712

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           T++I  +   G+   AV  F ++   G       Y A+I+ LC++    E+  F+  M+ 
Sbjct: 713 TTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLS 772

Query: 571 KGISP----CEV 578
           +GISP    CEV
Sbjct: 773 RGISPDLDICEV 784



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 49/402 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S   + GR+ E  S+  ++   GL       + V+   C+LG  + A  V+DEMC + 
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  ++ +   +++  C+ G + EA   L +++  G  LD     ++I  +   G    I+
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSG---CIE 504

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--LKL-------------- 322
           +A EL +  +  G  PNV T   LI G CK     +A ++   +KL              
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 323 ------------------VRSDNYKPNVHTYTAMISGYCKEEKM-NRAEMLLER------ 357
                             ++++   P   TY+ +  G C+  K+ N  ++L ER      
Sbjct: 565 DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFN 624

Query: 358 -----MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
                M+ +G+ P+  TY ++I   C+V +  RA++L   M  +   P    YN +ID L
Sbjct: 625 HVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C  G +++A   L    +R +   K  YT ++  H  + + + A+ LF +++  G N  I
Sbjct: 685 CIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSI 744

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
             Y+ +I   CR+    ES+ FF   ++ G+ P  +    MI
Sbjct: 745 RDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI 786



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 152/343 (44%), Gaps = 37/343 (10%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           N +T++ ++DGLC++   E A  LFL+     +  P+V ++ +++S YCK   ++ A+  
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSF 263

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              + + GL+P+  ++  LI G C VG+   A +L   M K G  P+   YN ++ G   
Sbjct: 264 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHL 323

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
            G +  A E+++    + L  D ITYTIL                               
Sbjct: 324 LGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSII 383

Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
                LS   K     +AL LF  +   GL PD+ AY+ +I   C+  K   + + + E 
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   T  +++ G  + G +  A      +   G   D I Y  +I G  K   +
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCI 503

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +EA + ++  I  GI+P   T  +L Y YCK  + A A  IL+
Sbjct: 504 EEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILD 546



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 3/275 (1%)

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N HTY+ ++ G C+++K+  A + L   + + + P+  ++ S++  +CK+G  + A    
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             + K G  P++Y++N +I+GLC  G + EA EL     +  ++ D +TY IL+      
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET- 509
                A  +   M+  GL+PD+  YT L+   C+   +       ++ ++ G F  K   
Sbjct: 325 GMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRG-FELKSII 383

Query: 510 -YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+ M+ G  + G +  A+  F  +   G  PD + Y  +I GLCK  K D A + Y+ M
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             K I P   T   +    C++G    A  +L+SL
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 145/331 (43%), Gaps = 46/331 (13%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +L++MK++ L  +T +Y S++Y      NF     + D+  KE    N + Y+ ++DGLC
Sbjct: 165 ILKKMKDRNLNVSTQSYNSVLY------NFRETDKMWDVY-KEIKDKNEHTYSTVVDGLC 217

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           ++ ++++A   L+ +  +++    +++  ++S + K      A   FC ++K GL P ++
Sbjct: 218 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVY 277

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           ++  LI   C    + E+ +   +    G+ P   TY  ++ G+   G IS A +  Q M
Sbjct: 278 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDM 337

Query: 534 NQIGCAPDNIT------------------------------------YGALISGLCKQSK 557
              G +PD IT                                    Y  ++SGLCK  +
Sbjct: 338 LDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGR 397

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNT 614
           +DEA   +  +   G++P  V    + +  CK G    A+ + + +  K  +   RT+  
Sbjct: 398 VDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGA 457

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
           ++  LC +  +  A      L+     +D +
Sbjct: 458 IMLGLCQKGMLLEARSLLDSLISSGDTLDII 488


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 209/396 (52%), Gaps = 13/396 (3%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKG 272
           +C   +  +A S   +VV+  R G+ + +  + + +  +G    D    + L+TA+ + G
Sbjct: 23  LCTHQMLLEAKSLIRIVVS--RKGKDSASAVFAAILGTKGTQRSDIYVFSGLMTAYLESG 80

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL---FLKLVRSDNYK 329
           F     Q F L ++   K W P      VL + L K     K F+L   F K +    Y 
Sbjct: 81  FVHDAIQCFRLTKK--HKFWVPFDTCRKVL-EHLMKL----KYFKLVWDFYKEILECGYP 133

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +++ +  ++  +CKE +M RA+ + + + + GL P+  ++ +L+ G+ ++G+ +  + L
Sbjct: 134 ASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P++Y Y+ +I+GLCK+ +V EA EL  +   R L  + +T+T L+  H K
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCK 253

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                 A+ ++ +M+  G +PD+  Y TLI   C++  +K+      E    GL P K T
Sbjct: 254 NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G  ++G++ +A ++ +RM +     DN+ Y AL+SGLC++ + D+A + +  M+
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREML 373

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             G+ P   T   +  E+CK+GD  TA  +L+ + +
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQR 409



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 162/284 (57%), Gaps = 4/284 (1%)

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +++  FC +G    +++A  + + + + G +P+V +   L++G  + G  ++ FRL  
Sbjct: 139 FNIVMHRFCKEG---EMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-K 194

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
             + +   +P+V+TY+ +I+G CKE K++ A  L   M ++GL+PN  T+T+LI  HCK 
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN 254

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M  +G +P++  YN +I GLCKKG +++   L+ +     L+ DKITY
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITY 314

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T L+    K+ + + A     RM+K  +  D  AYT L++  C++ +  ++EK F+E ++
Sbjct: 315 TTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            GL P   TYT +I  + + G++ +A +  + M + G  P  +T
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 4/293 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+   G P      N V+   C+ G +  A+ VFD +   G+     S+  ++  Y R+G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + E  R  SAM   G   D  T ++LI   C +     + +A EL  EM+ +G  PN  
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKE---SKVDEANELFNEMLDRGLVPNGV 242

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LID  CK G  + A  ++ +++ S  + P++ TY  +I G CK+  + +   L++ 
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQML-SQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M   GL P+  TYT+LI G CK G+ E A++    M KE    +  AY A++ GLC++GR
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGR 361

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
             +A ++ ++     L+ D  TYT++++E  K+ + + A  L   M + G  P
Sbjct: 362 ADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 1/302 (0%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K  ++  +E++  G+  ++Y   +++   CK+G   +A  +F  + +    +P+V ++  
Sbjct: 118 KLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKW-GLRPSVVSFNT 176

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++GY +   ++    L   M   G+ P+  TY+ LI G CK    + A +L + M   G
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   +  +ID  CK G V  A E+ K+   +    D ITY  L+    K+ + KQ  
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVR 296

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   GL PD   YTTLI   C++  ++ + +F +  I   +      YT+++ G 
Sbjct: 297 ALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGL 356

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G    A K F+ M  +G  PDN TY  +I+  CK+  +  A +  + M   G  PC 
Sbjct: 357 CQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCV 416

Query: 578 VT 579
           VT
Sbjct: 417 VT 418



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 4/242 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +G L EGF +   M  +G+     T + ++   C+   V+ A E+F+EM  RG
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+ G V  A      ML +G   D  T   LI   C K   G +K
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKK---GDLK 293

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q   L++EM   G KP+  T+T LIDG CK+G  E AF    ++++      NV  YTA+
Sbjct: 294 QVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNV-AYTAL 352

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG C+E + + AE +   M   GL P+  TYT +I   CK G+   A  L+  M ++G 
Sbjct: 353 VSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGH 412

Query: 399 TP 400
            P
Sbjct: 413 VP 414



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 155/312 (49%), Gaps = 5/312 (1%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           + +++ ++ +++ Y +   ++ A       K+       +T   ++    K+  F+  +D
Sbjct: 63  RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               + + G   ++Y +N ++   CK+G ++ A  +     +  L+   +++  L++ ++
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           +  +  +   L   M  +G+ PD++ Y+ LI   C++ K+ E+ + F E +  GL P   
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+T++I  + ++G + SA++ +++M   G +PD ITY  LI GLCK+  L +     + M
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT----LIRKLCSEKR 624
              G+ P ++T  TL    CK+GD  TA    + + K+  IR  N     L+  LC E R
Sbjct: 303 SMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKE-SIRLDNVAYTALVSGLCQEGR 361

Query: 625 VGMAALFFHKLL 636
              A   F ++L
Sbjct: 362 ADDAEKMFREML 373



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 21/344 (6%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ-----------GLLPNTNTYTSLIY- 375
           ++  +HTY  MI   C  + +  A+ L+  +  +            +L    T  S IY 
Sbjct: 9   FRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYV 68

Query: 376 ------GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
                  + + G    A     L  K            +++ L K    +  ++  K+  
Sbjct: 69  FSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEIL 128

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +    A    + I++    K+ E ++A  +F  + K GL P + ++ TL+  + R   + 
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E  +       +G+ P   TY+ +I G  ++  +  A + F  M   G  P+ +T+  LI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLI 248

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---K 606
              CK   +D A + Y+ M+ +G SP  +T  TL Y  CK+GD      +++ +     K
Sbjct: 249 DVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLK 308

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
               T  TLI   C E  +  A  F  +++ +   +D V+  AL
Sbjct: 309 PDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTAL 352



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G LK+  +++ EM+ NGL     T   ++   C+ G +E A E    M    
Sbjct: 282 LIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKES 341

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  +V   C+ GR  +A++    ML  G   DN T T++I  FC K   G ++
Sbjct: 342 IRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKK---GDVR 398

Query: 279 QAFELLEEMVRKGWKPNVYT 298
            A  LL+EM R G  P V T
Sbjct: 399 TASRLLKEMQRDGHVPCVVT 418


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 234/500 (46%), Gaps = 9/500 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +++  + G +     +  EM ++   + +   NR +G+       E AE ++ +M   G 
Sbjct: 16  IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
                +Y   +   C++ +    D  LS M   G I D     + +   C +   G   Q
Sbjct: 76  SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F     MV++G +P+V ++T+LI+GL + G    A  ++  ++RS    P+     A++
Sbjct: 136 TFFC---MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALV 191

Query: 340 SGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            G C   K++ A EM+ E +K   +  +T  Y +LI G CK G  E+A  L   M K GC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++  YN +++       ++ A  ++ +  +  +Q D  +Y  LL  H + +   +   
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
              + ++     D+ +Y+TLI  FCR    +++ + F+E    G+     TYTS+I  +L
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+GN S A K   +M ++G +PD I Y  ++  LCK   +D+A   +  MI   I+P  +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
           +  +L    C+ G    A+ + E +  K       T   +I  L   K++  A   + ++
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491

Query: 636 LGKDQNVDR-VSLAALKNAC 654
           + K   +DR VS   +K +C
Sbjct: 492 MDKGFTLDRDVSDTLIKASC 511



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 4/283 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++S F + GR+++  ++   M+  G      T N ++    +  +++ AE V  EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  DA SY  ++  +CR+    +   ++   ++     D  + + LI  FC     
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRA--- 338

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            + ++A+ L EEM +KG   NV T+T LI    ++G +  A +L  ++       P+   
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL-GLSPDRIF 397

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT ++   CK   +++A  +   M E  + P+  +Y SLI G C+ G    A  L + M 
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            + C P+   +  II GL +  ++  AY++  +   +    D+
Sbjct: 458 GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 107/270 (39%), Gaps = 26/270 (9%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           AY + I  L K G +  A ++  +      +     Y   +   ++++  + A  ++  M
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK---ETYTSMICGYLRD 520
              G +     Y+  I+  C+ KK    +    +  T G  P       Y  ++C   R+
Sbjct: 71  KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC---RE 127

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP----- 575
             +  AV+ F  M Q G  PD ++Y  LI+GL +  K+ +A + + +MI  G+SP     
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187

Query: 576 -------CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
                  C   +V LAYE   +         ++S   KL     N LI   C   R+  A
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEE--------IKSARVKLSTVVYNALISGFCKAGRIEKA 239

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESN 658
                 +       D V+   L N  Y++N
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/358 (20%), Positives = 138/358 (38%), Gaps = 39/358 (10%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y + I+   K   ++ A  + + M+       +  Y   I    +   FE A  +   M 
Sbjct: 12  YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71

Query: 395 KEGCTPNIYAYNAIIDGLCK-----------------------------------KGRVQ 419
             G +   + Y+  I GLCK                                   + +V 
Sbjct: 72  PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A +      QR  + D ++YTIL++   +  +   A+ ++  M+++G++PD  A   L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191

Query: 480 AAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
              C  +K+  + +   E I +A +  +   Y ++I G+ + G I  A      M++IGC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATA 596
            PD +TY  L++     + L  A      M+  GI     +   L   +C+    D    
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311

Query: 597 MIILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++ E   +    + + +TLI   C       A   F ++  K   ++ V+  +L  A
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 3/153 (1%)

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y S I   ++ G I +AV+ F  M        +  Y   I  L ++S+ + A   Y  M 
Sbjct: 12  YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71

Query: 570 GKGIS--PCEVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVG 626
             G S  P   +R        K+ D   A++  +E+L     I   N  +  LC E +VG
Sbjct: 72  PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            A   F  ++ + +  D VS   L N  + + K
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 43/228 (18%), Positives = 87/228 (38%), Gaps = 15/228 (6%)

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + L A ++ Y   ++  +K      A+ +F  M  +        Y   I    R+ + +
Sbjct: 2   HQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE 61

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +E  + +    G      TY+  I G  +             M  +G  PD   +   +
Sbjct: 62  LAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYL 121

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL------ 603
             LC+++K+  A Q +  M+ +G  P  V+   L     + G    A+ I  ++      
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181

Query: 604 -DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            D K        L+  LC  ++V +A    ++++ ++    RV L+ +
Sbjct: 182 PDNK----ACAALVVGLCHARKVDLA----YEMVAEEIKSARVKLSTV 221


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 173/317 (54%), Gaps = 4/317 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           AT TLLI      G  G I +   + EEM  KG K +++ +TV+I+  CK G T++AF L
Sbjct: 2   ATYTLLIDWH---GSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFAL 58

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +L        NVHTY A+I G CK  +M  AE+L+  M+ +GL  N   Y +LI G+C
Sbjct: 59  FDELTEK-GLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYC 117

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G  + A+ +  +M K+G   +IY  N I DGL K  + +EA   L    ++ +  + +
Sbjct: 118 KRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVV 177

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +YT L+  + K+    +A  LF  M KAG  P+   Y  LI    ++ +MKE+ +   E 
Sbjct: 178 SYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEM 237

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+FP   TYTS++ G    G +  AV+ F  + Q G   + +TY A+ISGL K+ + 
Sbjct: 238 RAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRS 297

Query: 559 DEACQFYESMIGKGISP 575
           +EA + Y+ M   G++P
Sbjct: 298 EEAFKLYDEMTEAGLTP 314



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 168/316 (53%), Gaps = 4/316 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G++ E   M  EM   G+         V+   C++G  + A  +FDE+  +G+ A+  +Y
Sbjct: 15  GKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTY 74

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ G +  A+  ++ M  RG  ++      LI  +C    RG I +AF++   
Sbjct: 75  GALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCK---RGLIDEAFKVQVI 131

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M +KG++ ++YT   + DGL K    E+A R  L ++      PNV +YT +I  YCKE 
Sbjct: 132 MEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEK-GVVPNVVSYTTLIDIYCKEG 190

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A+ L + MK+ G  PN  TY  LI GH K G  + AY+L D M  +G  P+IY Y 
Sbjct: 191 NFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYT 250

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           +++ G C  G++ +A EL  +  Q+ L  + +TYT ++S   K+  +++A  L+  M +A
Sbjct: 251 SLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEA 310

Query: 467 GLNPDIHAYTTLIAAF 482
           GL PD   YT+L+++ 
Sbjct: 311 GLTPDDRVYTSLVSSL 326



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 1/308 (0%)

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           V T+T+LID     G  ++  R+F ++      K ++H YT +I+  CK     RA  L 
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEK-GIKADIHVYTVVINWNCKIGNTKRAFALF 59

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
           + + E+GL+ N +TY +LI G CK G  E A  L++ M   G   N   YN +IDG CK+
Sbjct: 60  DELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKR 119

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G + EA+++     ++  + D  T   +     K  + ++A      M++ G+ P++ +Y
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSY 179

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           TTLI  +C++    E++K FQE   AG  P   TY  +I G+ + G +  A +    M  
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRA 239

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G  PD  TY +L+ G C   KLD+A + +  +  KG+    VT   +     K+G S  
Sbjct: 240 KGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEE 299

Query: 596 AMIILESL 603
           A  + + +
Sbjct: 300 AFKLYDEM 307



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 159/327 (48%), Gaps = 39/327 (11%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
            ++Y L++  +   G++ E +R    M ++G   D    T++I   C     G+ K+AF 
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCK---IGNTKRAFA 57

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L +E+  KG   NV+T+  LIDG+CK G  E A  + +  +++     N   Y  +I GY
Sbjct: 58  LFDELTEKGLVANVHTYGALIDGVCKAGEMEAA-EILVNEMQTRGLDVNQLIYNTLIDGY 116

Query: 343 CKEEKMNRA---EMLLER--------------------------------MKEQGLLPNT 367
           CK   ++ A   ++++E+                                M E+G++PN 
Sbjct: 117 CKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNV 176

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +YT+LI  +CK GNF  A  L   M K G  PN   YN +IDG  KKGR++EAYEL  +
Sbjct: 177 VSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDE 236

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + +  D  TYT LL       +   A+ LF  + + GL  ++  YT +I+   ++ +
Sbjct: 237 MRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGR 296

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMI 514
            +E+ K + E   AGL P    YTS++
Sbjct: 297 SEEAFKLYDEMTEAGLTPDDRVYTSLV 323



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 152/296 (51%), Gaps = 3/296 (1%)

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V TYT +I  +    K++  E + E M E+G+  + + YT +I  +CK+GN +RA+ L D
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            + ++G   N++ Y A+IDG+CK G ++ A  L+ +   R L  +++ Y  L+  + K+ 
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +A  +   M K G   DI+   T+     +  + +E++++    I  G+ P   +YT
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I  Y ++GN   A K FQ M + G  P+ +TY  LI G  K+ ++ EA +  + M  K
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKR 624
           GI P   T  +L +  C  G    A+ +   + +K   L + T   +I  L  E R
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGR 296



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 154/293 (52%), Gaps = 8/293 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   +++   +IG  K  F++  E+T  GL     T   ++   C+ G +E AE + +EM
Sbjct: 38  VYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEM 97

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +   Y  ++  YC+ G + EA +    M  +G   +N   TL   A    G R
Sbjct: 98  QTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKG--FENDIYTLNTIA---DGLR 152

Query: 275 --GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                ++A   L  M+ KG  PNV ++T LID  CK+G   +A +LF ++ ++   +PN 
Sbjct: 153 KLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGG-EPNA 211

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I G+ K+ +M  A  L + M+ +G+ P+  TYTSL++G C  G  + A +L + 
Sbjct: 212 VTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNE 271

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           + ++G   N+  Y AII GL K+GR +EA++L  +  +  L  D   YT L+S
Sbjct: 272 VRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVS 324



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 4/198 (2%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           ++    FE     +  +     ++ + +E    ++ M   G+     +   ++ I C+ G
Sbjct: 131 IMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEG 190

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
               A+++F EM   G   +A +Y +++  + + GR+ EA      M  +G   D  T T
Sbjct: 191 NFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYT 250

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+   C     G +  A EL  E+ +KG   NV T+T +I GL K+G +E+AF+L+ ++
Sbjct: 251 SLLHGEC---IFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEM 307

Query: 323 VRSDNYKPNVHTYTAMIS 340
             +    P+   YT+++S
Sbjct: 308 TEA-GLTPDDRVYTSLVS 324


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 200/401 (49%), Gaps = 17/401 (4%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FDEM  RG+  +   Y +++   C+  ++ +A R  S M   G   D  T  +L+  FC
Sbjct: 220 LFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFC 279

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G+   +  AF LL+ + + G    V  +  LI+GL +    E+A   + K++R +N K
Sbjct: 280 KSGY---LDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR-ENIK 335

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  YT MI G  +E ++  A  LL  M E+GL P+T  Y +LI G C +G  + A  L
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              + K  C PN + Y+ +I G+CK G + +A  + K+  +       +T+  L++   K
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 450 QAETKQALGLFCRM-----------VKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQ 496
               ++A  LF +M           +  G +   DI +   ++   C    + ++ K   
Sbjct: 456 ANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLM 515

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + + +G+ P   TY  +I G+ + GNI+ A K F+ M   G  PD++TYG LI GL +  
Sbjct: 516 QLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           + ++A + +E M+ KG  P   T  T+    C++ + + A+
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 223/486 (45%), Gaps = 28/486 (5%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++G   +    E   +V  E+    +   + ++ +++ AY   G   +A    S M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D     L++     K    +   A  +  +M++    P+V T+ +LI GLCK   T+
Sbjct: 159 CKPDLFAFNLILHFLVRKE---AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  LF ++       PN   Y+ ++SG C+ +K+  A+ L  +M+  G   +  TY  L
Sbjct: 216 DALVLFDEMT-DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G CK G  + A+ L+ L+ K+G    +  Y  +I+GL +  R +EA+   +K  +  +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D + YTI++    ++    +AL L   M + GL PD   Y  LI  FC    + E+E 
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              E      FP   TY+ +ICG  ++G I+ A   F+ M ++GC P  +T+ +LI+GLC
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 554 KQSKLDEA-CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL--------- 603
           K ++L+EA   FY+  I +   P    R++   +  K  D A+  +++E L         
Sbjct: 455 KANRLEEARLLFYQMEIVR--KPSLFLRLSQGTD--KVFDIASLQVMMERLCESGMILKA 510

Query: 604 --------DKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                   D  +   IRT N LI   C    +  A   F ++  K    D V+   L + 
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 654 CYESNK 659
            Y + +
Sbjct: 571 LYRAGR 576



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 260/611 (42%), Gaps = 53/611 (8%)

Query: 72  SYYQQFHLRSSPPRLNLQID--IDSL-THEQAITVVAS----------LANEAGSMVALS 118
           + +  +H R++P   ++++   I++L   E  + V++S          L  +  + +   
Sbjct: 20  TLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDTRLGFR 79

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
            F W++     R      ++    LI    FE   +V+Q + +S  +I    E FS++IE
Sbjct: 80  LFIWSLKSWHLRCRTVQDLIIG-KLIKENAFELYWKVLQELKNSAIKIS--SEAFSVLIE 136

Query: 179 M-TNNGLP-LITSTLNRVVGIACELGLVEY---------------AEEVFDEMCARGVCA 221
             +  G+      + + +    C+  L  +               A  V+++M    +  
Sbjct: 137 AYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  +Y +++   C+  +  +A      M DRG + +    +++++  C       I  A 
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK---KIFDAQ 253

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            L  +M   G   ++ T+ VL++G CK G+ + AF L L+L+  D +   V  Y  +I+G
Sbjct: 254 RLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL-LQLLTKDGHILGVIGYGCLING 312

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             +  +   A M  ++M  + + P+   YT +I G  + G    A  L+  M + G  P+
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YNA+I G C  G + EA  L  +  + +   +  TY+IL+    K     +A  +F 
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK-FFQEAIT--AGLFPTKETYTS------ 512
            M K G  P +  + +LI   C+  +++E+   F+Q  I     LF      T       
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492

Query: 513 ----MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               M+      G I  A K   ++   G  PD  TY  LI+G CK   ++ A + ++ M
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEM 552

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRV 625
             KG  P  VT  TL     + G +  A+ I E + KK  +    T  T++   C E  +
Sbjct: 553 QLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNI 612

Query: 626 GMAALFFHKLL 636
            +A   + K L
Sbjct: 613 SLALSVWMKYL 623



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 191/468 (40%), Gaps = 65/468 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL-GLV-----EYAEEVFD 212
           +++ F + G L + F+++  +T +G  L       V+G  C + GL      E A   + 
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHIL------GVIGYGCLINGLFRARRYEEAHMWYQ 327

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M    +  D   Y +M+    + GRVTEA   L  M +RG   D      LI  FCD G
Sbjct: 328 KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           +   + +A  L  E+ +    PN +T+++LI G+CK G   KA  +F K +      P+V
Sbjct: 388 Y---LDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF-KEMEKLGCLPSV 443

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMK--------------------------------- 359
            T+ ++I+G CK  ++  A +L  +M+                                 
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 360 ---------------EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
                          + G+LP+  TY  LI G CK GN   A+ L   M  +G  P+   
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +IDGL + GR ++A E+ ++  ++    +  TY  +++   ++     AL ++ + +
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +     +      +  +F  ++      +  +  I +  F     YT  + G ++     
Sbjct: 624 RDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLA-PYTIFLIGLVQAKRDC 682

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            A   F  +        + +   LI  LC    LD A   +   + +G
Sbjct: 683 EAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 249/555 (44%), Gaps = 54/555 (9%)

Query: 149 FERAHEVMQC---------MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           F+R HE+  C         ++++  E  +  E  S  +     GL     T N ++ I+C
Sbjct: 101 FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 160

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                + A+E+ + M  +G   D  SY  ++ +  + G +++A +    M +RG   D A
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              +LI  F  KG    I  A E+ E +++     PN+ ++ V+I+GLCK G  +++F +
Sbjct: 221 CYNILIDGFFKKG---DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++ +++  + +++TY+ +I G C    ++ A  + + M E G+ P+   Y +++ G+ 
Sbjct: 278 WHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G  E   +L  +M KEGC   + +YN +I GL +  +V EA  + +   +++  AD +
Sbjct: 337 RAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM 395

Query: 439 TYTILLSEHLKQAETKQAL-----------------------------------GLFCRM 463
           TY +L+    K     +AL                                   G+  +M
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K G  P+ H    +I  F R  K++++ +FF   ++ G FPT  TY ++I G  +    
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 515

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A    + M   G  P+ ITY  L++GLC+  KLD A   +   + KG  P       +
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
            +  C  G    A+ +   + ++  +    T NTL+      +    A+  +  +L    
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGP 635

Query: 641 NVDRVSL-AALKNAC 654
             D +S    LK  C
Sbjct: 636 QPDIISYNITLKGLC 650



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 202/423 (47%), Gaps = 9/423 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+  E F +   M  N       T + ++   C  G ++ A  V+ EM   G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y  M+  Y R GR+ E    L  ++++       +  +LI    +      + 
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENA---KVD 376

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT--YT 336
           +A  + E +  K    +  T+ VL+ GLCK G+  KA  +   L  ++N + ++ T  Y+
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI---LEEAENGRGDLDTFAYS 433

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +MI+G C+E +++    +L++M + G  PN +   ++I G  +    E A      M  +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P +  YN +I+GL K  R  EAY L+K+   +  + + ITY++L++   +  +   A
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L+C+ ++ G  PD+  +  +I   C   K++++ + + E       P   T+ +++ G
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + +  +   A K +  + Q G  PD I+Y   + GLC   ++ +A  F    + +G+ P 
Sbjct: 614 FYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 673

Query: 577 EVT 579
            +T
Sbjct: 674 AIT 676



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 227/511 (44%), Gaps = 52/511 (10%)

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
           L + +   E+F   C  G+     SY  ++ A     +  EA+ +       G   +  T
Sbjct: 98  LDIFQRMHEIFG--CQPGI----RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQT 151

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF- 319
             +LI   C K       +A ELL  M  +G+ P+V+++  LI+ L K G+   A +LF 
Sbjct: 152 YNILIKISCRKK---QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208

Query: 320 ----------------------------------LKLVRSDNYKPNVHTYTAMISGYCKE 345
                                              +L++  +  PN+ +Y  MI+G CK 
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K + +  +  RMK+     +  TY++LI+G C  GN + A  +   M + G +P++  Y
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +++G  + GR++E  EL  K  ++E     ++Y IL+    + A+  +A+ ++  + +
Sbjct: 329 NTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPE 387

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
                D   Y  L+   C+   + ++    +EA           Y+SMI G  R+G +  
Sbjct: 388 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 447

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
                 +M + GC P+     A+I+G  + SKL++A +F+ +M+ KG  P  VT  TL  
Sbjct: 448 VAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 507

Query: 586 EYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK---- 638
              K    + A  +++ +  K W   + T + L+  LC  K++ MA   + + L K    
Sbjct: 508 GLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP 567

Query: 639 DQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           D  +  + +  L ++    +   L+S++ QR
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 180/370 (48%), Gaps = 5/370 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   M++ +   GR++E   +   M   G   + S  N ++    E   V+ A  +++ +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISIWELL 385

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             +  CAD+ +Y ++V   C+ G + +A   L    +    LD    + +I   C +G  
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG-- 443

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             + +   +L++M + G KPN +    +I+G  +    E A R F  +V    + P V T
Sbjct: 444 -RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVT 501

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+G  K E+ + A  L++ M  +G  PN  TY+ L+ G C+    + A +L     
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G  P++  +N II GLC  G+V++A +L  +  QR+   + +T+  L+    K  + +
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  ++  +++ G  PDI +Y   +   C   ++ ++  F  +A+  G+ PT  T+  ++
Sbjct: 622 RASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681

Query: 515 CGYLRDGNIS 524
              L +G ++
Sbjct: 682 RAVLDNGALT 691



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 40/367 (10%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I    K    ++A  +F ++      +P + +Y ++++   +  K + AE      +  
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL PN  TY  LI   C+   F++A +L++ M ++G +P++++Y  +I+ L K G + +A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA--------------- 466
            +L  +  +R +  D   Y IL+    K+ +   A  ++ R++K                
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 467 GL---------------------NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           GL                       D++ Y+TLI   C    +  + + ++E    G+ P
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               Y +M+ GYLR G I   ++ ++ M + GC    ++Y  LI GL + +K+DEA   +
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIW 382

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
           E +  K      +T   L +  CK G    A+ ILE  +     L     +++I  LC E
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442

Query: 623 KRVGMAA 629
            R+   A
Sbjct: 443 GRLDEVA 449


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 246/550 (44%), Gaps = 37/550 (6%)

Query: 70  LESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKF 129
           L+ + ++F ++ SP  ++  +  D +  +  I              A SFF W+    K+
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDI--------------AWSFFCWSRKQKKY 148

Query: 130 RHFMRLYIVCA---------------TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
            H +  Y+                  +S I    F         ++ SF ++G ++E   
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLW 208

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +  +M  NG+     T N ++        V+ AE VF+ M +  +  D  +Y  M+  YC
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268

Query: 235 RMGRVTEADRWLSAMLDRGAILDNAT-LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           + G+  +A   L  M  RG   D  T +T++   + D  F   +     L +EM  KG +
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA----LYQEMDEKGIQ 324

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
              +  +++I GLCK+G   + + +F  ++R  + KPNV  YT +I GY K   +  A  
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIR 383

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL RM ++G  P+  TY+ ++ G CK G  E A D       +G   N   Y+++IDGL 
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM-VKAGLNPDI 472
           K GRV EA  L ++  ++    D   Y  L+    K  +  +A+ LF RM  + G +  +
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + YT L++   ++ + +E+ K +   I  G+ PT   + ++  G    G ++ A K    
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +  +G   D      +I+ LCK  ++ EAC+  + +  +G       R  +     K G 
Sbjct: 564 LAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK 622

Query: 593 SATAMIILES 602
           +  AM ++ S
Sbjct: 623 ADLAMKLMHS 632



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 40/376 (10%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI +F   G  G +++   +  +M   G +P +YT+  L++GL    + + A R+F +++
Sbjct: 193 LIKSF---GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVM 248

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S   KP++ TY  MI GYCK  +  +A   L  M+ +G   +  TY ++I       +F
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
                L   M ++G     +A++ +I GLCK+G++ E Y + +   ++  + +   YT+L
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  + K    + A+ L  RM+  G  PD+  Y+ ++   C+  +++E+  +F      GL
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC- 562
                 Y+S+I G  + G +  A + F+ M++ GC  D+  Y ALI    K  K+DEA  
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488

Query: 563 -----------------------------------QFYESMIGKGISPCEVTRVTLAYEY 587
                                              + ++ MI KGI+P       L+   
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548

Query: 588 CKQGDSATAMIILESL 603
           C  G  A A  IL+ L
Sbjct: 549 CLSGKVARACKILDEL 564



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 7/360 (1%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           +K +  N+  +  L+D L      ++  R     ++   +   V    A+I  + K   +
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDR-IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
                +  +MKE G+ P   TY  L+ G       + A  + ++M      P+I  YN +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G CK G+ Q+A E L+    R  +ADKITY  ++      ++    + L+  M + G+
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
               HA++ +I   C++ K+ E    F+  I  G  P    YT +I GY + G++  A++
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              RM   G  PD +TY  +++GLCK  +++EA  ++ +    G++   +   +L     
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443

Query: 589 KQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL---LGKDQNV 642
           K G    A  + E + +K   R     N LI      ++V  A   F ++    G DQ V
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 33/322 (10%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+ +     + V+G  C+ G +     VF+ M  +G   + + Y +++  Y + G
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------------ 273
            V +A R L  M+D G   D  T ++++   C  G                         
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436

Query: 274 --------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                    G + +A  L EEM  KG   + Y +  LID   K    ++A  LF ++   
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           +     V+TYT ++SG  KE +   A  L + M ++G+ P    + +L  G C  G   R
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  ++D +   G   +  A   +I+ LCK GR++EA +L     +R  +      T++++
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615

Query: 446 EHLKQAETKQALGLFCRMVKAG 467
              K  +   A+ L    +  G
Sbjct: 616 ALRKVGKADLAMKLMHSKIGIG 637


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 210/446 (47%), Gaps = 36/446 (8%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------------- 269
           +Y +++  +CR  +++ A   L  M+  G      TL+ L+  +C               
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 270 -DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
            + G+R                    +A  L++ MV++G +PN+ T+ V+++GLCK+G T
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  L  K+  +   + +V  +  +I   CK   ++ A  L + M+ +G+ PN  TY+S
Sbjct: 242 DLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C  G +  A  L+  M ++   PN+  +NA+ID   K+G+  EA +L     +R 
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  D  TY  L++         +A  +F  MV     PD+  Y TLI  FC+ K++++  
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F+E    GL     TYT++I G   DG+  +A K F++M   G  PD +TY  L+ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD---KKLWI 609
           C   KL++A + ++ M    I        T+    CK G       +  SL     K  +
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
            T NT+I  LCS++ +  A     K+
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKM 566



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 4/448 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E +   +  +++ +    R+ +  ++V +M   G    T T   ++           A 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + D M  RG   +  +Y ++V   C+ G    A   L+ M       D      +I + 
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C   +R  +  A  L +EM  KG +PNV T++ LI  LC  G    A +L   ++     
Sbjct: 271 CK--YR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KI 326

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN+ T+ A+I  + KE K   AE L + M ++ + P+  TY SL+ G C     ++A  
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + M  + C P++  YN +I G CK  RV++  EL ++   R L  D +TYT L+    
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              +   A  +F +MV  G+ PDI  Y+ L+   C   K++++ + F     + +     
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT+MI G  + G +      F  ++  G  P+ +TY  +ISGLC +  L EA    + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATA 596
              G  P   T  TL   + + GD A +
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAAS 594



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 193/371 (52%), Gaps = 5/371 (1%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++   C+   V+ A  +F EM  +G+  +  +Y  ++   C  GR ++A + LS M+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           ++    +  T   LI AF  +G      +A +L ++M+++   P+++T+  L++G C   
Sbjct: 323 EKKINPNLVTFNALIDAFVKEG---KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA ++F  +V  D + P+V TY  +I G+CK +++     L   M  +GL+ +T TY
Sbjct: 380 RLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           T+LI G    G+ + A  +   M  +G  P+I  Y+ ++DGLC  G++++A E+     +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            E++ D   YT ++    K  +      LFC +   G+ P++  Y T+I+  C ++ ++E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +    ++    G  P   TY ++I  +LRDG+ +++ +  + M       D  T G L++
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVA 617

Query: 551 GLCKQSKLDEA 561
            +    +LD++
Sbjct: 618 NMLHDGRLDKS 628



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L E+M R      +YT+ +LI+  C++     A  L  K+++   Y+P++ T ++++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLL 162

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +GYC  ++++ A  L+++M E G  P+T T+T+LI+G         A  L+D M + GC 
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  Y  +++GLCK+G    A  LL K    +++AD + +  ++    K      AL L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T+ ++I  +++
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G    A K +  M +    PD  TY +L++G C   +LD+A Q +E M+ K   P  VT
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402

Query: 580 RVTLAYEYCK 589
             TL   +CK
Sbjct: 403 YNTLIKGFCK 412



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 205/465 (44%), Gaps = 40/465 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C    +  A  +  +M   G      +   ++  YC   R+++A   +  M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++ G   D  T T LI             +A  L++ MV++G +PN+ T+ V+++GLCK+
Sbjct: 182 VEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238

Query: 310 GWTEKAFRLFLKL----------------------------------VRSDNYKPNVHTY 335
           G T+ A  L  K+                                  + +   +PNV TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           +++IS  C   + + A  LL  M E+ + PN  T+ +LI    K G F  A  L D M K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               P+I+ YN++++G C   R+ +A ++ +    ++   D +TY  L+    K    + 
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
              LF  M   GL  D   YTTLI           ++K F++ ++ G+ P   TY+ ++ 
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G   +G +  A++ F  M +     D   Y  +I G+CK  K+D+    + S+  KG+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
             VT  T+    C +     A  +L+ + +   +    T NTLIR
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 12/366 (3%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  +V+S    P++  +  ++S   K +K +    L E+M+   ++    TY  
Sbjct: 67  DDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  L+  M K G  P+I   +++++G C   R+ +A  L+ +  +  
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D IT+T L+       +  +A+ L  RMV+ G  P++  Y  ++   C++     + 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               +   A +      + ++I    +  ++  A+  F+ M   G  P+ +TY +LIS L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKL 607
           C   +  +A Q    MI K I+P  VT   L   + K+G    A      +I  S+D  +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALF 663
           +  T N+L+   C   R+  A   F  ++ KD   D V+   L     +S +      LF
Sbjct: 366 F--TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 664 SDLSQR 669
            ++S R
Sbjct: 424 REMSHR 429


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 217/460 (47%), Gaps = 26/460 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC-AR 217
           ++  + + G +     +V  M   GL     + N ++   C+ G  + A+ +  E+  +R
Sbjct: 153 LIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESR 212

Query: 218 GVC--------------------ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
           GV                     AD  +Y  ++  YC+   + EA      M+  G + D
Sbjct: 213 GVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPD 272

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T + ++   C  G    + +A ELL EM + G  PN   +T LID L K G   +AF 
Sbjct: 273 VVTYSSIVNGLCKDG---RLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
              +LV       ++   T ++ G  K  K   AE +   + +  L+PN+ TYT+LI G+
Sbjct: 330 CQSQLVVR-GMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           CKVG+ ER   L+  M ++   PN+  Y++II+G  KKG + EA  ++KK   + +  + 
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
             Y IL+  + K  + + A  L+  M  +GL  +   +  L+    R K+M E+E+  ++
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
             + GL      YTS++ G+ + G  S+A+   + M +     D +TY  LI+GL +  K
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             EA   Y  MI  G++P + T   +   YCKQG+   A+
Sbjct: 569 Y-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL 607



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 199/435 (45%), Gaps = 26/435 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V ++ ++G L     +   + N  + + T T N V+   C+ GLV  A      M  + 
Sbjct: 51  LVHAWCKMGNLILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKD 107

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            C D  +  ++V  +CR+G     +R +  ++  G   D      LI  +C  G    + 
Sbjct: 108 TCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAG---EMS 164

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA------------------FRLFL 320
            A +L+E M ++G   ++ ++  LI+G CK+G  +KA                  F +  
Sbjct: 165 LALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDD 224

Query: 321 KLVRSDNY--KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           ++ + DN   + ++ TYT +IS YCK+  +  A  L E M   G LP+  TY+S++ G C
Sbjct: 225 RIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLC 284

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A +L+  M K G  PN  AY  +ID L K G   EA+    +   R +  D +
Sbjct: 285 KDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLV 344

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
             T L+    K ++ K+A  +F  + K  L P+   YT LI  +C+   M+  E   QE 
Sbjct: 345 MCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEM 404

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P   TY+S+I GY + G +  A+   ++M      P+   Y  LI G CK  K 
Sbjct: 405 EEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQ 464

Query: 559 DEACQFYESMIGKGI 573
           + A   Y  M   G+
Sbjct: 465 EIATDLYNEMKLSGL 479



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 217/492 (44%), Gaps = 55/492 (11%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G+ ER   ++Q M               ++ + + G L E  +++ +M +  +       
Sbjct: 392 GDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVY 451

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
             ++   C+ G  E A ++++EM   G+  +   + ++V    R  R+ EA+  L  +  
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG +LD+   T L+  F   G   +   A  ++EEM  K    +V T+ VLI+GL + G 
Sbjct: 512 RGLLLDHVNYTSLMDGFFKAGKESA---ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E A  ++  ++      PN  TY  MI  YCK+ +++ A  L   MK   ++P++ T  
Sbjct: 569 YE-AKSVYSGMIEM-GLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV------------- 418
           +L+ G  + G  E+A ++++ M   G  PN+  +  +++   K G+              
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDM 686

Query: 419 -----QEAYE-----------------LLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
                QEAY                  +LK   +    AD +TY  L+  + + +  K+A
Sbjct: 687 GLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKA 746

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L  + +M+  G++P+I  Y  L+        M E ++ F +    GL P   TY ++I G
Sbjct: 747 LATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISG 806

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y + GN   +++ +  M   G  P   TY  LIS   K  K+D+A +    M  +G+ P 
Sbjct: 807 YGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPS 866

Query: 577 EVTRVTLAYEYC 588
             T   L   +C
Sbjct: 867 SSTYDILICGWC 878



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 60/388 (15%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + Q  ++  EM+     PNVYTH VL+   CK G       L L L+R+ + + +  T
Sbjct: 24  GLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMG----NLILALDLLRNVDVEVDTVT 79

Query: 335 YTAMISGYCKEEKMNRA-----------------------------------EMLLERMK 359
           Y  +I G+C+   +N+A                                   E +++ + 
Sbjct: 80  YNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLV 139

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G   +   + +LI G+CK G    A DL++ M KEG   +I +YN +I+G CK+G   
Sbjct: 140 SGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYD 199

Query: 420 EAYELL---------------------KKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +A  LL                     KK     L+AD ITYT ++S + KQ   ++A  
Sbjct: 200 KAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARA 259

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M+  G  PD+  Y++++   C+  ++ E+++  +E    G+ P    YT++I    
Sbjct: 260 LYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLF 319

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+   A     ++   G   D +    L+ GL K SK  EA   + ++    + P  +
Sbjct: 320 KAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSI 379

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
           T   L   YCK GD      +L+ +++K
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEMEEK 407



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 203/439 (46%), Gaps = 5/439 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++G ++   S++ EM    +     T + ++    + G+++ A  V  +M  + 
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQN 443

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +A  Y +++  YC+ G+   A    + M   G  ++N    +L+     +G R  + 
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL-KRGKR--MD 500

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ELL+++  +G   +   +T L+DG  K G    A  +  ++    +   +V TY  +
Sbjct: 501 EAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEK-SIPFDVVTYNVL 559

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G  +  K   A+ +   M E GL PN  TY  +I  +CK G  + A +L + M     
Sbjct: 560 INGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKI 618

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    N ++ GL + G +++A  +L +     +  + + + +LL+   K  +    L 
Sbjct: 619 MPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQ 678

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  ++V  GL  +  AY  LI  FCR +  K++    +  I  G      TY ++I GY 
Sbjct: 679 MHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYC 738

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
              ++  A+  + +M   G +P+ +TY  L+ GL     + E  + ++ M   G++P   
Sbjct: 739 ESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAS 798

Query: 579 TRVTLAYEYCKQGDSATAM 597
           T  TL   Y K G+   ++
Sbjct: 799 TYDTLISGYGKIGNKKESI 817



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 32/344 (9%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M++  ++P    +  LIY     G   +  D+   M      PN+Y +N ++   CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A +LL+     +++ D +TY  ++    +     QA G    MVK     D      
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L+  FCR    K  E+     ++ G       + ++I GY + G +S A+   +RM + G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 538 CAPDNITYGALISGLCKQSKLDEA-CQFYESMIGKGISPCE------------------- 577
              D ++Y  LI+G CK+ + D+A    +E    +G+                       
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 578 -VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
            +T  T+   YCKQ     A  + E +    +   + T ++++  LC + R+  A     
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 634 KL--LGKDQNVDRVSLAALKNACYES-NKYALFSDLSQRIAEGI 674
           ++  +G D N   V+   L ++ +++ + +  F+  SQ +  G+
Sbjct: 298 EMKKMGVDPN--HVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 16/287 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + + ++++ ++ G+      M  ++ + GL +     N ++ + C L + + A  V   M
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYM 718

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G  AD  +Y  ++  YC    V +A    + ML+ G   +  T  LL+         
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG---LLGA 775

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +  EL ++M   G  P+  T+  LI G  K G  +++ RL+ ++V +  + P   T
Sbjct: 776 GLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMV-AQGFVPKTST 834

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG---NFER------ 385
           Y  +IS + K  KM++A  LL  M+ +G+ P+++TY  LI G C +    + +R      
Sbjct: 835 YNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIY 894

Query: 386 ---AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
              A +L+  M  +G  P       I     + G++ +A +LLK+ F
Sbjct: 895 RTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIF 941



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 22/251 (8%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
            E    ++  F  +   K+  S++  M  +G    T T N ++   CE   V+ A   + 
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYT 751

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   GV  +  +Y L++      G + E D     M + G   D +T   LI+ +   G
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY---G 808

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G+ K++  L  EMV +G+ P   T+ VLI    K G  ++A R  L  ++     P+ 
Sbjct: 809 KIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQA-RELLNEMQVRGVPPSS 867

Query: 333 HTYTAMISGYC---KEEKMNR---------AEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
            TY  +I G+C   K   ++R         A+ L+  M ++G +P  +T        C  
Sbjct: 868 STYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIA------CIS 921

Query: 381 GNFERAYDLMD 391
             F R   ++D
Sbjct: 922 STFARPGKMLD 932


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 230/507 (45%), Gaps = 42/507 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L+E    + +M   G  L   +   ++ +  + G    A +V+  M + G+     +Y
Sbjct: 171 GGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTY 230

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++VA  +   +      L  M   G   +  T T+ I      G  G I +A+ +L+ 
Sbjct: 231 SALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRIL---GRAGKIDEAYGILKR 287

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G  P+V T+TVLID LC  G    A  LFLK+ ++ ++KP+  TY  ++  +    
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM-KASSHKPDRVTYITLLDKFSDHG 346

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            ++  +     M+  G LP+  T+T LI   CKVG  + A+  +D+M K+G  PN++ YN
Sbjct: 347 DLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYN 406

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I GL +  R+ EA EL        L+    TY + +  + K  E+ +A+  F +M   
Sbjct: 407 TLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P+I A    + +   Q +++E+++FF      GL P   TY  ++  Y + G +  A
Sbjct: 467 GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526

Query: 527 VKY-----------------------------------FQRMNQIGCAPDNITYGALISG 551
           +K                                    FQRM ++  AP  +TY  L++G
Sbjct: 527 IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAG 586

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
           L K+ ++ EA   ++ MI     P  ++  TL    CK G+   A+ +L  + +      
Sbjct: 587 LGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPD 646

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + T NT+I  L  E RV  A   FH++
Sbjct: 647 VLTYNTVIYGLIKENRVNYAFWLFHQM 673



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 200/450 (44%), Gaps = 6/450 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + GL     T    + I    G ++ A  +   M   G   D  +Y +++ A C  G
Sbjct: 252 EMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAG 311

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++  A      M       D  T   L+  F D G   +IK   E   EM   G+ P+V 
Sbjct: 312 KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK---EFWSEMEADGYLPDVV 368

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T+LID LCK G  ++AF   L +++     PN+HTY  +I G  +  +++ A  L   
Sbjct: 369 TFTILIDALCKVGKVDEAFGT-LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNS 427

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  GL     TY   I  + K G   +A    + M   G  PNI A NA +  L ++GR
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR 487

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           ++EA E      +  L  D ITY IL+  + K      A+ L   M + G +P++    +
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI    +  ++ E+ K FQ      L PT  TY +++ G  ++G +  A   F+ M    
Sbjct: 548 LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C P+ I++  L+  LCK  ++D A +    M      P  +T  T+ Y   K+     A 
Sbjct: 608 CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF 667

Query: 598 IILESLDKKLWIR--TVNTLIRKLCSEKRV 625
            +   + K ++    T+ TL+  +  + R+
Sbjct: 668 WLFHQMKKVIYPDYVTLCTLLPGVIKDGRI 697



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 39/400 (9%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           RG +++A   LE+M + G+  N Y++  LI  L K G+  +A +++ ++V S+  KP++ 
Sbjct: 170 RGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMV-SEGIKPSLK 228

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+A++    K   +     LL+ M+  GL PN  T+T  I    + G  + AY ++  M
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM 288

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK--------------------------- 426
              GC P++  Y  +ID LC  G++  A EL                             
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348

Query: 427 ---KAFQRELQADK-----ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
              K F  E++AD      +T+TIL+    K  +  +A G    M K G+ P++H Y TL
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I    R  ++ E+ + F    + GL  T  TY   I  Y + G    A+K F++M   G 
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            P+ +   A +  L +Q +L+EA +F+  +   G++P  +T   L   Y K G    A+ 
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528

Query: 599 ILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +L  +++      +  +N+LI  L    RV  A   F ++
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM 568



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 150/300 (50%), Gaps = 4/300 (1%)

Query: 249  MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
            M + G   D  T  L + A    G  G IK+ F+L EEM+ +G KPN  TH ++I GL K
Sbjct: 814  MKNAGCTPDVFTYNLFLDAL---GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870

Query: 309  KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
                +KA  L+  L+  D + P   TY  +I G  K  ++  A+   E M + G +PN  
Sbjct: 871  SNSLDKAIDLYYDLMSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929

Query: 369  TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
             Y  L+ G  K G+ E A +L   M KEG  P++ +Y+ ++D LC  G+V +A    ++ 
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 429  FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                L  D + Y ++++   +    ++AL LF  M   G+ PD++ Y  LI        +
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049

Query: 489  KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            +E+ K ++E    GL P   TY ++I G+   GN   A   +++M   GC P+  T+  L
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 167/349 (47%), Gaps = 7/349 (2%)

Query: 257  DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKA 315
            D++ L  L+   C     G    A+ +  ++ +     P++  +  LIDGL K   TE A
Sbjct: 751  DDSVLIPLVKFLCK---HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMA 807

Query: 316  FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
            + LF K+ ++    P+V TY   +    K  K+     L E M  +G  PNT T+  +I+
Sbjct: 808  WGLFYKM-KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIF 866

Query: 376  GHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G  K  + ++A DL  DLM  +  +P  + Y  +IDGL K GR++EA +  ++       
Sbjct: 867  GLVKSNSLDKAIDLYYDLMSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCM 925

Query: 435  ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
             +   Y IL++   KQ + + A  LF RMVK G+ PD+ +Y+ ++   C   K+ ++  +
Sbjct: 926  PNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHY 985

Query: 495  FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            F+E   +GL P    Y  MI G  R   +  A+  F  M   G  PD  TY ALI  L  
Sbjct: 986  FEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGI 1045

Query: 555  QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
               ++EA + YE +  KG+ P   T   L   +   G+   A  + + +
Sbjct: 1046 AGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 219/515 (42%), Gaps = 13/515 (2%)

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
           S   ++  +KE +S   EM  +G      T   ++   C++G V+ A    D M  +GV 
Sbjct: 343 SDHGDLDAIKEFWS---EMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVA 399

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            +  +Y  ++    R+ R+ EA    ++M   G      T  L I  +   G  G   +A
Sbjct: 400 PNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESG---KA 456

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
            +  E+M   G  PN+      +  L ++G  E+A   F  L +     P+  TY  ++ 
Sbjct: 457 IKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC-GLAPDAITYNILMR 515

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            Y K  +++ A  LL  M+E G  P      SLI    K    + A+ +   M +    P
Sbjct: 516 CYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
            +  YN ++ GL K+GRVQEA  L K     +   + I++  LL    K  E   AL + 
Sbjct: 576 TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            RM +    PD+  Y T+I    ++ ++  +   F + +   ++P   T  +++ G ++D
Sbjct: 636 FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKD 694

Query: 521 GNISSAVKYFQR-MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           G I  A +  +  ++ +G   D   +  L+ G+  ++++ ++  F ES++   I   +  
Sbjct: 695 GRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV 754

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWI----RTVNTLIRKLCSEKRVGMAALFFHKL 635
            + L    CK G +  A  +   L K   I       N+LI  L   +   MA   F+K+
Sbjct: 755 LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRI 670
                  D  +     +A  +S K     DL + +
Sbjct: 815 KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM 849



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 1/298 (0%)

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + A+ L  +M   G  P+V+T+ + +D L K G  ++ F L+ +++     KPN  T+  
Sbjct: 805  EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR-GCKPNTITHNI 863

Query: 338  MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            +I G  K   +++A  L   +      P   TY  LI G  K+G  E A    + M   G
Sbjct: 864  VIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYG 923

Query: 398  CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            C PN   YN +++G  K+G V+ A EL ++  +  ++ D  +Y+I++       +   AL
Sbjct: 924  CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDAL 983

Query: 458  GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
              F  +  +GL+PD+  Y  +I    R ++++E+   F E    G+ P   TY ++I   
Sbjct: 984  HYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNL 1043

Query: 518  LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
               G +  A K ++ +   G  P+  TY ALI G       D A   Y+ M+  G  P
Sbjct: 1044 GIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRP 1101



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 135/268 (50%), Gaps = 4/268 (1%)

Query: 160  VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
            + +  + G++KE F +  EM   G    T T N V+    +   ++ A +++ ++ +   
Sbjct: 830  LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889

Query: 220  CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
                 +Y  ++    ++GR+ EA ++   MLD G + +     +L+  F   G +G ++ 
Sbjct: 890  SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGF---GKQGDVET 946

Query: 280  AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            A EL   MV++G +P++ ++++++D LC  G  + A   F +L  S    P++  Y  MI
Sbjct: 947  ACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS-GLDPDLVCYNLMI 1005

Query: 340  SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            +G  + +++  A  L + M+ +G+ P+  TY +LI      G  E A  + + +  +G  
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065

Query: 400  PNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            PN++ YNA+I G    G    AY + KK
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKK 1093



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 126/258 (48%)

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           +   L++    K +++TY  +         +  A + LE+M++ G + N  +Y  LI+  
Sbjct: 143 VVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLL 202

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            K G    A  +   M  EG  P++  Y+A++  L K+  ++    LL++     L+ + 
Sbjct: 203 LKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNI 262

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            T+TI +    +  +  +A G+  RM  AG  PD+  YT LI A C   K+  +++ F +
Sbjct: 263 YTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
              +   P + TY +++  +   G++ +  +++  M   G  PD +T+  LI  LCK  K
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382

Query: 558 LDEACQFYESMIGKGISP 575
           +DEA    + M  +G++P
Sbjct: 383 VDEAFGTLDVMKKQGVAP 400



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 3/243 (1%)

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + +LM K+    +I  Y  I   L  +G ++EA   L+K  +     +  +Y  L+   L
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLL 203

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K    ++AL ++ RMV  G+ P +  Y+ L+ A  +++ ++      QE  + GL P   
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+T  I    R G I  A    +RM+  GC PD +TY  LI  LC   KL+ A + +  M
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRV 625
                 P  VT +TL  ++   GD          ++   ++  V T   LI  LC   +V
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 626 GMA 628
             A
Sbjct: 384 DEA 386



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 4/180 (2%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++ F + G ++    +   M   G+     + + +V   C +G V+ A   F+E+   G
Sbjct: 934  LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            +  D   Y LM+    R  RV EA      M +RG   D  T   LI      G  G ++
Sbjct: 994  LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNL---GIAGMVE 1050

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +A ++ EE+  KG +PNV+T+  LI G    G  ++A+ ++ K++     +PN  T+  +
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG-GCRPNTGTFAQL 1109


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 210/446 (47%), Gaps = 36/446 (8%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------------- 269
           +Y +++  +CR  +++ A   L  M+  G      TL+ L+  +C               
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 270 -DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
            + G+R                    +A  L++ MV++G +PN+ T+ V+++GLCK+G T
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  L  K+  +   + +V  +  +I   CK   ++ A  L + M+ +G+ PN  TY+S
Sbjct: 204 DLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C  G +  A  L+  M ++   PN+  +NA+ID   K+G+  EA +L     +R 
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +  D  TY  L++         +A  +F  MV     PD+  Y TLI  FC+ K++++  
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F+E    GL     TYT++I G   DG+  +A K F++M   G  PD +TY  L+ GL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD---KKLWI 609
           C   KL++A + ++ M    I        T+    CK G       +  SL     K  +
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
            T NT+I  LCS++ +  A     K+
Sbjct: 503 VTYNTMISGLCSKRLLQEAYALLKKM 528



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 4/448 (0%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E +   +  +++ +    R+ +  ++V +M   G    T T   ++           A 
Sbjct: 113 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 172

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + D M  RG   +  +Y ++V   C+ G    A   L+ M       D      +I + 
Sbjct: 173 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C   +R  +  A  L +EM  KG +PNV T++ LI  LC  G    A +L   ++     
Sbjct: 233 CK--YR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KI 288

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN+ T+ A+I  + KE K   AE L + M ++ + P+  TY SL+ G C     ++A  
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + M  + C P++  YN +I G CK  RV++  EL ++   R L  D +TYT L+    
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              +   A  +F +MV  G+ PDI  Y+ L+   C   K++++ + F     + +     
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT+MI G  + G +      F  ++  G  P+ +TY  +ISGLC +  L EA    + M
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 528

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATA 596
              G  P   T  TL   + + GD A +
Sbjct: 529 KEDGPLPNSGTYNTLIRAHLRDGDKAAS 556



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 193/371 (52%), Gaps = 5/371 (1%)

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            N ++   C+   V+ A  +F EM  +G+  +  +Y  ++   C  GR ++A + LS M+
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           ++    +  T   LI AF  +G      +A +L ++M+++   P+++T+  L++G C   
Sbjct: 285 EKKINPNLVTFNALIDAFVKEG---KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 341

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
             +KA ++F  +V  D + P+V TY  +I G+CK +++     L   M  +GL+ +T TY
Sbjct: 342 RLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           T+LI G    G+ + A  +   M  +G  P+I  Y+ ++DGLC  G++++A E+     +
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            E++ D   YT ++    K  +      LFC +   G+ P++  Y T+I+  C ++ ++E
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +    ++    G  P   TY ++I  +LRDG+ +++ +  + M       D  T G L++
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVA 579

Query: 551 GLCKQSKLDEA 561
            +    +LD++
Sbjct: 580 NMLHDGRLDKS 590



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L E+M R      +YT+ +LI+  C++     A  L  K+++   Y+P++ T ++++
Sbjct: 66  VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLL 124

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +GYC  ++++ A  L+++M E G  P+T T+T+LI+G         A  L+D M + GC 
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  Y  +++GLCK+G    A  LL K    +++AD + +  ++    K      AL L
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T+ ++I  +++
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           +G    A K +  M +    PD  TY +L++G C   +LD+A Q +E M+ K   P  VT
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364

Query: 580 RVTLAYEYCK 589
             TL   +CK
Sbjct: 365 YNTLIKGFCK 374



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 205/465 (44%), Gaps = 40/465 (8%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C    +  A  +  +M   G      +   ++  YC   R+++A   +  M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           ++ G   D  T T LI             +A  L++ MV++G +PN+ T+ V+++GLCK+
Sbjct: 144 VEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200

Query: 310 GWTEKAFRLFLKL----------------------------------VRSDNYKPNVHTY 335
           G T+ A  L  K+                                  + +   +PNV TY
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           +++IS  C   + + A  LL  M E+ + PN  T+ +LI    K G F  A  L D M K
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
               P+I+ YN++++G C   R+ +A ++ +    ++   D +TY  L+    K    + 
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
              LF  M   GL  D   YTTLI           ++K F++ ++ G+ P   TY+ ++ 
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G   +G +  A++ F  M +     D   Y  +I G+CK  K+D+    + S+  KG+ P
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
             VT  T+    C +     A  +L+ + +   +    T NTLIR
Sbjct: 501 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 12/366 (3%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           + A  LF  +V+S    P++  +  ++S   K +K +    L E+M+   ++    TY  
Sbjct: 29  DDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI   C+      A  L+  M K G  P+I   +++++G C   R+ +A  L+ +  +  
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
            + D IT+T L+       +  +A+ L  RMV+ G  P++  Y  ++   C++     + 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
               +   A +      + ++I    +  ++  A+  F+ M   G  P+ +TY +LIS L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKL 607
           C   +  +A Q    MI K I+P  VT   L   + K+G    A      +I  S+D  +
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALF 663
           +  T N+L+   C   R+  A   F  ++ KD   D V+   L     +S +      LF
Sbjct: 328 F--TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385

Query: 664 SDLSQR 669
            ++S R
Sbjct: 386 REMSHR 391


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 231/503 (45%), Gaps = 50/503 (9%)

Query: 149 FERAHEVMQC---------MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           F+R HE+  C         ++++  E  +  E  S  +     GL     T N ++ I+C
Sbjct: 101 FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 160

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
                + A+E+ + M  +G   D  SY  ++ +  + G +++A +    M +RG   D A
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              +LI  F  KG    I  A E+ E +++     PN+ ++ V+I+GLCK G  +++F +
Sbjct: 221 CYNILIDGFFKKG---DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++ +++  + +++TY+ +I G C    ++ A  + + M E G+ P+   Y +++ G+ 
Sbjct: 278 WHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           + G  E   +L  +M KEGC   + +YN +I GL +  +V EA  + +   +++  AD +
Sbjct: 337 RAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM 395

Query: 439 TYTILLSEHLKQAETKQAL-----------------------------------GLFCRM 463
           TY +L+    K     +AL                                   G+  +M
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
            K G  P+ H    +I  F R  K++++ +FF   ++ G FPT  TY ++I G  +    
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 515

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           S A    + M   G  P+ ITY  L++GLC+  KLD A   +   + KG  P       +
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575

Query: 584 AYEYCKQGDSATAMIILESLDKK 606
            +  C  G    A+ +   + ++
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQR 598



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 227/511 (44%), Gaps = 52/511 (10%)

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
           L + +   E+F   C  G+     SY  ++ A     +  EA+ +       G   +  T
Sbjct: 98  LDIFQRMHEIFG--CQPGI----RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQT 151

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF- 319
             +LI   C K       +A ELL  M  +G+ P+V+++  LI+ L K G+   A +LF 
Sbjct: 152 YNILIKISCRKK---QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208

Query: 320 ----------------------------------LKLVRSDNYKPNVHTYTAMISGYCKE 345
                                              +L++  +  PN+ +Y  MI+G CK 
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
            K + +  +  RMK+     +  TY++LI+G C  GN + A  +   M + G +P++  Y
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +++G  + GR++E  EL  K  ++E     ++Y IL+    + A+  +A+ ++  + +
Sbjct: 329 NTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPE 387

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
                D   Y  L+   C+   + ++    +EA           Y+SMI G  R+G +  
Sbjct: 388 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 447

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
                 +M + GC P+     A+I+G  + SKL++A +F+ +M+ KG  P  VT  TL  
Sbjct: 448 VAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 507

Query: 586 EYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK---- 638
              K    + A  +++ +  K W   + T + L+  LC  K++ MA   + + L K    
Sbjct: 508 GLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP 567

Query: 639 DQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           D  +  + +  L ++    +   L+S++ QR
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 180/379 (47%), Gaps = 9/379 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   + G+  E F +   M  N       T + ++   C  G ++ A  V+ EM   G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y  M+  Y R GR+ E    L  ++++       +  +LI    +      + 
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFE---NAKVD 376

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT--YT 336
           +A  + E +  K    +  T+ VL+ GLCK G+  KA  +   L  ++N + ++ T  Y+
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSI---LEEAENGRGDLDTFAYS 433

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
           +MI+G C+E +++    +L++M + G  PN +   ++I G  +    E A      M  +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC P +  YN +I+GL K  R  EAY L+K+   +  + + ITY++L++   +  +   A
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           L L+C+ ++ G  PD+  +  +I   C   K++++ + + E       P   T+ +++ G
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 517 YLRDGNISSAVKYFQRMNQ 535
           + +  +   A K +  + Q
Sbjct: 614 FYKVRDFERASKIWDHILQ 632



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 40/367 (10%)

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           +I    K    ++A  +F ++      +P + +Y ++++   +  K + AE      +  
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL PN  TY  LI   C+   F++A +L++ M ++G +P++++Y  +I+ L K G + +A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA--------------- 466
            +L  +  +R +  D   Y IL+    K+ +   A  ++ R++K                
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 467 GL---------------------NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           GL                       D++ Y+TLI   C    +  + + ++E    G+ P
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               Y +M+ GYLR G I   ++ ++ M + GC    ++Y  LI GL + +K+DEA   +
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIW 382

Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
           E +  K      +T   L +  CK G    A+ ILE  +     L     +++I  LC E
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442

Query: 623 KRVGMAA 629
            R+   A
Sbjct: 443 GRLDEVA 449



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 4/245 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + G L +  S++ E  N    L T   + ++   C  G ++    V D+M   G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +      ++  + R  ++ +A R+   M+ +G      T   LI     K  R S  
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL-SKAERFS-- 516

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+ L++EM+ KGWKPN+ T+++L++GLC+    + A  L+ + +    +KP+V  +  +
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNII 575

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C   K+  A  L   MK++  +PN  T+ +L+ G  KV +FERA  + D + +   
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWS 635

Query: 399 TPNIY 403
           + N Y
Sbjct: 636 SSNCY 640


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 210/477 (44%), Gaps = 44/477 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  +++S   +  +  GFS++  M   GL     T   ++   C  G V  A E+ D +
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G  +D  +Y +++   C+MG+ +EA  WL  M +R    +    + ++   C  G  
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL- 231

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRL--------------- 318
             + +A  L  EM  KG KPN+ T+T LI GLC  G W E    L               
Sbjct: 232 --VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSL 289

Query: 319 ---------------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
                                F+ LV      P+V TY ++I  YC + +M+ A  + E 
Sbjct: 290 NILVDVLCKEGKIMQAKSVIGFMILVGE---VPDVFTYNSLIDRYCLQNQMDEATRVFEL 346

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +G LP+   YTSLI+G CK+ N  +A  L+D M K G TP++  +  +I G C+ GR
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
              A EL     +     +  T  I+L    K     +AL LF  M K+ L+ +I  Y+ 
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           ++   C   K+  + + F      GL      YT MI G+ + G +  A      M + G
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENG 526

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYCKQGDS 593
           C PD+ TY   + GL  + ++  + ++   M  KG S     T + + Y    QGD+
Sbjct: 527 CMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDN 583



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 208/454 (45%), Gaps = 8/454 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNATLT 262
           ++ A   F  M           + L++    +M   T A   +  M    G   D   L 
Sbjct: 56  IDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILN 115

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
           ++I + C       +   F +L  M++ G +P+V T T+LI+GLC KG   +A  L +  
Sbjct: 116 VVINSLCHLKL---VAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL-VDH 171

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           V    Y+ +V TY  +I+G CK  K + A   L +M+E+   PN   Y++++ G CK G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A  L   M  +G  PN+  Y  +I GLC  GR +EA  LL +  +  +  D  +  I
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    K+ +  QA  +   M+  G  PD+  Y +LI  +C Q +M E+ + F+  ++ G
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 351

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    YTS+I G+ +  NI+ A+     M ++G  PD +T+  LI G C+  +   A 
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAK 411

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKL 619
           + + +M   G  P   T   +    CK    + A+ +  +++K    L I   + ++  +
Sbjct: 412 ELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           CS  ++  A   F  L  K   ++  +   + N 
Sbjct: 472 CSAGKLNTALELFSCLPAKGLQINVYAYTIMING 505



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 228/510 (44%), Gaps = 34/510 (6%)

Query: 72  SYYQQFH--LRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKF 129
           S  ++ H  L   P    L + I+SL H   + +VA   +  G+M+ L      + F   
Sbjct: 96  SLVKEMHSSLGIKPDTFILNVVINSLCH---LKLVAFGFSVLGTMLKLGLEPSVVTFT-- 150

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFS 174
                   +    L   G+  RA E++                 +++   ++G+  E   
Sbjct: 151 --------ILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVG 202

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
            + +M            + V+   C+ GLV  A  +  EM  +G+  +  +Y  ++   C
Sbjct: 203 WLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC 262

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             GR  EA   L  M+  G + D  +L +L+   C +G    I QA  ++  M+  G  P
Sbjct: 263 NFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEG---KIMQAKSVIGFMILVGEVP 319

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V+T+  LID  C +   ++A R+F +L+ S    P++  YT++I G+CK + +N+A  L
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVF-ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHL 378

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           L+ M + G  P+  T+T+LI G C+VG    A +L   M K G  PN+     I+DGLCK
Sbjct: 379 LDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCK 438

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
              + EA  L     +  L  + + Y+I+L       +   AL LF  +   GL  +++A
Sbjct: 439 SQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYA 498

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT +I  F +Q  + ++E         G  P   TY   + G + +  I+ ++KY   M 
Sbjct: 499 YTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMR 558

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQF 564
             G + D  T   +I+ L      +E  +F
Sbjct: 559 DKGFSVDATTTEMIINYLSTNQGDNELREF 588



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 195/420 (46%), Gaps = 19/420 (4%)

Query: 234 CRMGR---VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ---AFELLEEM 287
           C+ G+   + EA  +   M     +      TLL+      GF   +K    A  L++EM
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLL------GFIVKMKHYTTAISLVKEM 101

Query: 288 VRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
               G KP+ +   V+I+ LC        F +   +++    +P+V T+T +I+G C + 
Sbjct: 102 HSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKL-GLEPSVVTFTILINGLCVKG 160

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            + RA  L++ +++ G   +  TY  LI G CK+G    A   +  M +    PN+  Y+
Sbjct: 161 DVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYS 220

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++DGLCK G V EA  L  +   + ++ + +TYT L+         K+A  L   M+K 
Sbjct: 221 TVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKM 280

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ PD+ +   L+   C++ K+ +++      I  G  P   TY S+I  Y     +  A
Sbjct: 281 GVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEA 340

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            + F+ M   GC PD + Y +LI G CK   +++A    + MI  G +P  VT  TL   
Sbjct: 341 TRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGG 400

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +C+ G    A  +  ++ K   +  + T   ++  LC  + +  A   FH +  +  N+D
Sbjct: 401 FCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM--EKSNLD 458



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 72/337 (21%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++      GR KE  S++ EM   G+     +LN +V + C+ G +  A+ V   M   
Sbjct: 256 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV 315

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  +Y  ++  YC   ++ EA R    M+ RG + D    T LI  +C      +I
Sbjct: 316 GEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCK---IKNI 372

Query: 278 KQAFELLEEMV-----------------------------------RKGWKPNVYTHTVL 302
            +A  LL+EM+                                   + G  PN+ T  ++
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSD----------------------------------NY 328
           +DGLCK     +A  LF  + +S+                                    
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           + NV+ YT MI+G+ K+  +++AE LL  M+E G +P++ TY   + G        R+  
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK 552

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
            + +M  +G + +      II+ L       E  E L
Sbjct: 553 YLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 246/550 (44%), Gaps = 37/550 (6%)

Query: 70  LESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKF 129
           L+ + ++F ++ SP  ++  +  D +  +  I              A SFF W+    K+
Sbjct: 85  LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDI--------------AWSFFCWSRKQKKY 130

Query: 130 RHFMRLYIVCA---------------TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
            H +  Y+                  +S I    F         ++ SF ++G ++E   
Sbjct: 131 THNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLW 190

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +  +M  NG+     T N ++        V+ AE VF+ M +  +  D  +Y  M+  YC
Sbjct: 191 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 250

Query: 235 RMGRVTEADRWLSAMLDRGAILDNAT-LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           + G+  +A   L  M  RG   D  T +T++   + D  F   +     L +EM  KG +
Sbjct: 251 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA----LYQEMDEKGIQ 306

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
              +  +++I GLCK+G   + + +F  ++R  + KPNV  YT +I GY K   +  A  
Sbjct: 307 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIR 365

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL RM ++G  P+  TY+ ++ G CK G  E A D       +G   N   Y+++IDGL 
Sbjct: 366 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 425

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM-VKAGLNPDI 472
           K GRV EA  L ++  ++    D   Y  L+    K  +  +A+ LF RM  + G +  +
Sbjct: 426 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 485

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + YT L++   ++ + +E+ K +   I  G+ PT   + ++  G    G ++ A K    
Sbjct: 486 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 545

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +  +G   D      +I+ LCK  ++ EAC+  + +  +G       R  +     K G 
Sbjct: 546 LAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK 604

Query: 593 SATAMIILES 602
           +  AM ++ S
Sbjct: 605 ADLAMKLMHS 614



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 40/376 (10%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI +F   G  G +++   +  +M   G +P +YT+  L++GL    + + A R+F +++
Sbjct: 175 LIKSF---GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVM 230

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S   KP++ TY  MI GYCK  +  +A   L  M+ +G   +  TY ++I       +F
Sbjct: 231 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 290

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
                L   M ++G     +A++ +I GLCK+G++ E Y + +   ++  + +   YT+L
Sbjct: 291 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 350

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  + K    + A+ L  RM+  G  PD+  Y+ ++   C+  +++E+  +F      GL
Sbjct: 351 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 410

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC- 562
                 Y+S+I G  + G +  A + F+ M++ GC  D+  Y ALI    K  K+DEA  
Sbjct: 411 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 470

Query: 563 -----------------------------------QFYESMIGKGISPCEVTRVTLAYEY 587
                                              + ++ MI KGI+P       L+   
Sbjct: 471 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 530

Query: 588 CKQGDSATAMIILESL 603
           C  G  A A  IL+ L
Sbjct: 531 CLSGKVARACKILDEL 546



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 7/360 (1%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           +K +  N+  +  L+D L      ++  R     ++   +   V    A+I  + K   +
Sbjct: 127 QKKYTHNLECYVSLVDVLALAKDVDR-IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 185

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
                +  +MKE G+ P   TY  L+ G       + A  + ++M      P+I  YN +
Sbjct: 186 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 245

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G CK G+ Q+A E L+    R  +ADKITY  ++      ++    + L+  M + G+
Sbjct: 246 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 305

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
               HA++ +I   C++ K+ E    F+  I  G  P    YT +I GY + G++  A++
Sbjct: 306 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 365

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              RM   G  PD +TY  +++GLCK  +++EA  ++ +    G++   +   +L     
Sbjct: 366 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 425

Query: 589 KQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL---LGKDQNV 642
           K G    A  + E + +K   R     N LI      ++V  A   F ++    G DQ V
Sbjct: 426 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 485



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 33/322 (10%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   G+ +     + V+G  C+ G +     VF+ M  +G   + + Y +++  Y + G
Sbjct: 299 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 358

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------------ 273
            V +A R L  M+D G   D  T ++++   C  G                         
Sbjct: 359 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 418

Query: 274 --------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                    G + +A  L EEM  KG   + Y +  LID   K    ++A  LF ++   
Sbjct: 419 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 478

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           +     V+TYT ++SG  KE +   A  L + M ++G+ P    + +L  G C  G   R
Sbjct: 479 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 538

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  ++D +   G   +  A   +I+ LCK GR++EA +L     +R  +      T++++
Sbjct: 539 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 597

Query: 446 EHLKQAETKQALGLFCRMVKAG 467
              K  +   A+ L    +  G
Sbjct: 598 ALRKVGKADLAMKLMHSKIGIG 619


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 200/415 (48%), Gaps = 13/415 (3%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEV 210
           AH   Q +V      GR  +   +  +MT + G       L+ +V       L++ +  +
Sbjct: 144 AHSCQQIIVV-LCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 202

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEA----DRWLSAMLDRGAILDNATLTLLIT 266
             +    G   +A +Y  ++ +    GRV +     +RW+    DR    D  +  ++I 
Sbjct: 203 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ---DRVYSPDVWSFNVVIK 259

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C  G    +++A EL+E M   G  P+  TH +L+DGLC+     +   +  +L R  
Sbjct: 260 GVCRVG---QVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PNV T+T++ISGYCK  K+  A  +   M   G++PNT TY  LI G+ KVG+   A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            ++   M +  C P++  ++++IDG C+ G++ +A  +     Q  +Q +  T++I++  
Sbjct: 377 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 436

Query: 447 HLKQAETKQALGLFCRM-VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
             KQ  + +A+GL   + ++  + P    Y  +I   C+  K+ E+    +     G  P
Sbjct: 437 LCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 496

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            K TYT +I GY     IS A+ +F  M + GC+PD+IT    IS L K    +E
Sbjct: 497 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 551



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 189/391 (48%), Gaps = 8/391 (2%)

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD-RWLSAMLD 251
           +++ + C  G    A ++FD+M      +  + +   +V+ C    + +A    LS   +
Sbjct: 149 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 208

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKG 310
            G  ++      L+++      RG +     L E  ++ + + P+V++  V+I G+C+ G
Sbjct: 209 FGCRVEAYAYNKLMSSLIG---RGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVG 265

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNT 369
             +KA  L  ++       P+  T+  ++ G C+  +++R   +L R++  G+ +PN  T
Sbjct: 266 QVQKALELVERM-NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 324

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +TS+I G+CK G  E A  + + M   G  PN   YN +I+G  K G +  A E+ ++  
Sbjct: 325 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 384

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     D +T++ L+  + +  +   AL ++  M +  + P+++ ++ +I + C+Q +  
Sbjct: 385 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 444

Query: 490 ESEKFFQE-AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           E+     E  +   + P    Y  +I    + G +  A    + M + GC PD  TY  L
Sbjct: 445 EAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 504

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           I G C +S++ EA  F+  M+  G SP  +T
Sbjct: 505 IIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 535



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 177/387 (45%), Gaps = 4/387 (1%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A S + ++V  CR GR  +A +    M        +A     + + C       + 
Sbjct: 140 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCA--NLLD 197

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +  LL +    G +   Y +  L+  L  +G       LF + ++   Y P+V ++  +
Sbjct: 198 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVV 257

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I G C+  ++ +A  L+ERM E G  P+T T+  L+ G C+     R ++++  + ++G 
Sbjct: 258 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGV 317

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  + ++I G CK G++++A  +        +  + +TY +L++ + K  +   A+
Sbjct: 318 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 377

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            ++ +M +    PD+  +++LI  +CR  ++ ++ + + +     + P   T++ +I   
Sbjct: 378 EVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSL 437

Query: 518 LRDGNISSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            +      A+     +N +   AP    Y  +I  LCK  K+DEA    + M  KG  P 
Sbjct: 438 CKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPD 497

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
           + T   L   YC +   + A++    +
Sbjct: 498 KYTYTILIIGYCMKSRISEAIMFFHEM 524



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 174/347 (50%), Gaps = 12/347 (3%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+ ++   +I  LC+ G    A +LF ++     Y P+    + ++S       ++ +  
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK----EGCTPNIYAYNAII 409
           LL +  E G       Y  L+      G   R +D++ L  +       +P+++++N +I
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRG---RVHDVVALFERWIQDRVYSPDVWSFNVVI 258

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL- 468
            G+C+ G+VQ+A EL+++  +     D +T+ IL+    +  E  +   +  R+ + G+ 
Sbjct: 259 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVC 318

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P++  +T++I+ +C+  K++++   + + + +G+ P   TY  +I GY + G++ SAV+
Sbjct: 319 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 378

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +Q+M ++ C PD +T+ +LI G C+  +LD+A + +  M    I P   T   + +  C
Sbjct: 379 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 438

Query: 589 KQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGMAALF 631
           KQ  S  A+ +L  L+ +  I       N +I  LC   +V  A L 
Sbjct: 439 KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLI 485



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 6/272 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V        +  G  ++  +  +G  +P +  T   V+   C+ G +E A  V+++M A
Sbjct: 292 LVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV-TFTSVISGYCKAGKLEDAMAVYNDMVA 350

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +Y +++  Y ++G +  A      M       D  T + LI  +C  G    
Sbjct: 351 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCG---Q 407

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +  +M +   +PNVYT +++I  LCK+  +++A  L  +L    +  P    Y 
Sbjct: 408 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 467

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK  K++ A ++ + M+E+G  P+  TYT LI G+C       A      M + 
Sbjct: 468 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 527

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           GC+P+    N  I  L K G   E   +++ A
Sbjct: 528 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLA 559


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 237/525 (45%), Gaps = 45/525 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ + A+ G+LK+   +  EM   G      + NR++    + G +  A  VF +M   G
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAG 159

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +  +M  AYCR GRV  A  +L  M + G  ++      ++  +C  G     +
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIG---QTE 216

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +LL  +  KG  PNV T+T+L+ G CK+G  E+A ++  ++  ++    +   Y A+
Sbjct: 217 VARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGAL 276

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+GYC+  +M  A  + + M + G+  N   Y ++I G+CK+G       L+      G 
Sbjct: 277 INGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGV 336

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             + Y+YN ++DG C+KG + +A+E      +       +TY  LL+    +     AL 
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L+  M+K G+ P+  + +TL+  F +  K +++   ++E +  GL     T  ++I G  
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ---------FYES-- 567
           ++  ++ A + F RM +  C  D++TY  LI G CK   L  A Q         F  S  
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516

Query: 568 ------------------------MIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL--- 600
                                   M  KG+SP  VT   L   +CK+G+   A I+    
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576

Query: 601 --ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             + L   L+I +V  L+     E +V  A L   KL   D   D
Sbjct: 577 VEKGLKPNLFICSV--LVSCFYREGKVDEANLVLQKLADTDMIQD 619



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/582 (25%), Positives = 246/582 (42%), Gaps = 100/582 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITST-LNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V  + + GR++E   +V E+  N   +I       ++   C+ G +E A  V DEM   
Sbjct: 240 LVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA 299

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF---- 273
           GV  +   Y  M+  YC++GR+ E ++ L A   RG  LD  +   L+  +C KGF    
Sbjct: 300 GVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359

Query: 274 ----------------------------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                       RG+I  A +L   M+++G  PN  + + L+DG
Sbjct: 360 FETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDG 419

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             K G TE+A  L+ K   +     NV T   +I+G CK  +M  AE L  RMKE     
Sbjct: 420 FFKAGKTEQALNLW-KETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPC 478

Query: 366 NTNTYTSLIYGHCKVGNFERAY-----------------------------------DLM 390
           ++ TY +LI G+CK+G+  RA                                    D+ 
Sbjct: 479 DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIR 538

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
             M  +G +PN   Y A+I G CK+G + +A  L  +  ++ L+ +    ++L+S   ++
Sbjct: 539 VEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598

Query: 451 AETKQALGLFCRMVKAGLNPDIHA--------------------------YTTLIAAFCR 484
            +  +A  +  ++    +  D  A                          +  +I   C+
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCK 658

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             ++ ++   F++    G  P   TY+S+I G    G+I  A      M      P+ +T
Sbjct: 659 LGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVT 718

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y +LI GLCK   +  A   +  +  KGISP  +T  TL   +CK G++  A  + + + 
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778

Query: 605 KKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           K+    TV T   LI  LC++  +  A     +++  + NVD
Sbjct: 779 KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMI--ENNVD 818



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 194/446 (43%), Gaps = 63/446 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G+ ++  ++  E    GL     T+N V+   C+   +  AEE+F  M    
Sbjct: 416 LLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS 475

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL---------------------- 256
              D+ +Y+ ++  YC++G +  A +    M + G +                       
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 257 -------------DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                        +  T   LI  +C +G   ++  A  L  EMV KG KPN++  +VL+
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEG---NLHDACILYFEMVEKGLKPNLFICSVLV 592

Query: 304 DGLCKKGWTEKAFRLFLKLVRSD-------------------------NYKPNVHTYTAM 338
               ++G  ++A  +  KL  +D                         N++     +  +
Sbjct: 593 SCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIV 652

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G CK  ++  A  L E +K +G +P+  TY+SLI+G    G+ + A+ L D M     
Sbjct: 653 ILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARL 712

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPNI  YN++I GLCK   V  A  L  K   + +  + ITY  L+  H K   T +A  
Sbjct: 713 TPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFK 772

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M+K G+ P +  YT LI   C Q  M+E+ K   + I   + P   TY ++I GY 
Sbjct: 773 LKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYA 832

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNIT 544
           R GN+ +  K +  M+  G  P N T
Sbjct: 833 RCGNMKAITKLYNEMHICGLLPANWT 858



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 24/279 (8%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           ++ GN + A  +   ++    ++GR+ +  ++  ++   G      T + ++      G 
Sbjct: 637 LAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGS 696

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  + DEM +  +  +  +Y  ++   C+   V+ A    + +  +G   +  T   
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI   C     G+  +AF+L ++M+++G +P V+T+T+LI GLC +G+ E+A +L  +++
Sbjct: 757 LIDGHCKD---GNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMI 813

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK---- 379
             +N  PN  TY  +I GY +   M     L   M   GLLP   T      GH K    
Sbjct: 814 E-NNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT------GHVKQAEP 866

Query: 380 --------VGNFERAYDLMDLMGK--EGCTPNIYAYNAI 408
                   VG+ E    ++ +  +  EG T N+YAY A+
Sbjct: 867 VVNSKNLSVGHVEPDCKIIRIKNRTSEGSTVNLYAYYAL 905



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/347 (20%), Positives = 151/347 (43%), Gaps = 5/347 (1%)

Query: 318 LFLKLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
           LF  LV    ++  +  ++  ++  +    ++  A  + + M + G      +   L+  
Sbjct: 79  LFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQ 138

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
             + G+   A  +   M   G  P+ +    +    C+ GRV  A + LK+  +  L  +
Sbjct: 139 LVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVN 198

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
            + Y  ++  + +  +T+ A  L   +   GL+P++  YT L+  +C++ +M+E+EK  +
Sbjct: 199 LVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVK 258

Query: 497 EAITAGLFPTKET-YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           E          E  Y ++I GY + G +  A +    M   G   +   Y  +I+G CK 
Sbjct: 259 EIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKL 318

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--- 612
            ++ E  +  ++   +G++  E +  TL   YC++G    A    + + +  +  T    
Sbjct: 319 GRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTY 378

Query: 613 NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           NTL+   CS   +  A   +  +L +    + +S + L +  +++ K
Sbjct: 379 NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGK 425


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 204/415 (49%), Gaps = 6/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +  RL E  S+ + + +      + T   ++      G V  A  ++++M   G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
              +A  Y  ++  + + GR  +  +    M+ RG   D     +L+  + D  F+ G I
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD----LMLLNNYMDCVFKAGEI 567

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++   L EE+  +G  P+V ++++LI GL K G+++  ++LF ++ +      +   Y  
Sbjct: 568 EKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM-KEQGLHLDTRAYNI 626

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+CK  K+N+A  LLE MK +GL P   TY S+I G  K+   + AY L +    + 
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N+  Y+++IDG  K GR+ EAY +L++  Q+ L  +  T+  LL   +K  E  +AL
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL 746

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M      P+   Y+ ++   C+ +K  ++  F+QE    GL P   TYT+MI G 
Sbjct: 747 VCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGL 806

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            R GN+  A   F+R    G  PD+  Y A+I GL   +K  +A   +E    KG
Sbjct: 807 ARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 213/445 (47%), Gaps = 5/445 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++     G+++E   ++  M  +  P +TS  N ++ + C+ G +E A +V D M  
Sbjct: 381 NCILTCLGRKGKVEEALRILEAMKMDAAPNLTS-YNILIDMLCKAGELEAALKVQDSMKE 439

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +  +M+   C+  R+ EA      +  +    D+ T   LI      G  G 
Sbjct: 440 AGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGL---GRHGK 496

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A+ L E+M+  G  PN   +T LI    K G  E   +++ +++      P++    
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR-GCSPDLMLLN 555

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             +    K  ++ +   L E +K QGL P+  +Y+ LI+G  K G  +  Y L   M ++
Sbjct: 556 NYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQ 615

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G   +  AYN +IDG CK G+V +AY+LL++   + LQ   +TY  ++    K     +A
Sbjct: 616 GLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEA 675

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF       ++ ++  Y++LI  F +  ++ E+    +E +  GL P   T+  ++  
Sbjct: 676 YMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDA 735

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            ++   I  A+  FQ M  + C P+ +TY  +++GLCK  K ++A  F++ M  +G+ P 
Sbjct: 736 LVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPN 795

Query: 577 EVTRVTLAYEYCKQGDSATAMIILE 601
            +T  T+     + G+   A  + E
Sbjct: 796 TITYTTMISGLARVGNVLEAKDLFE 820



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 219/479 (45%), Gaps = 8/479 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F ++G++   +    E+ + GL     T   ++G+ C+   V+ A E+F+E+ +   
Sbjct: 279 IDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKS 338

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
                +Y  M++ Y  +G+  EA   L     +G I        ++T     G +G +++
Sbjct: 339 VPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCL---GRKGKVEE 395

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  +LE M +    PN+ ++ +LID LCK G  E A ++   +  +  + PN+ T   MI
Sbjct: 396 ALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLF-PNIITVNIMI 453

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK ++++ A  +   +  +   P++ T+ SLI G  + G    AY L + M   G T
Sbjct: 454 DRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT 513

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y ++I    K GR ++ +++ K+   R    D +     +    K  E ++   L
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   GL PD+ +Y+ LI    +    K++ K F E    GL      Y  +I G+ +
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCK 633

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A +  + M   G  P  +TYG++I GL K  +LDEA   +E    K +    V 
Sbjct: 634 SGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVV 693

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
             +L   + K G    A +ILE L +K       T N L+  L   + +  A + F  +
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 34/404 (8%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCR---------------------------- 235
           +EY E++ +EM   G     ++   MV ++ +                            
Sbjct: 148 LEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTT 207

Query: 236 ----MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
               +    EAD  L+ +     I    T+ L  T  C     G +  A  LL+EM    
Sbjct: 208 LIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNS 267

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           +  ++  + V ID   K G  + A++ F +L +S    P+  T+T+MI   CK E+++ A
Sbjct: 268 FNADLVLYNVCIDCFGKVGKVDMAWKFFHEL-KSQGLVPDDVTFTSMIGVLCKAERVDEA 326

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             L E +     +P    Y ++I G+  VG F  AY L++   ++GC P++ AYN I+  
Sbjct: 327 VELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC 386

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L +KG+V+EA  +L +A + +   +  +Y IL+    K  E + AL +   M +AGL P+
Sbjct: 387 LGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPN 445

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           I     +I   C+ +++ E+   F         P   T+ S+I G  R G ++ A   ++
Sbjct: 446 IITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYE 505

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           +M   G  P+ + Y +LI    K  + ++  + Y+ M+ +G SP
Sbjct: 506 KMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 170/348 (48%), Gaps = 4/348 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F + GR ++G  +  EM + G       LN  +    + G +E    +F+E+
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI 577

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            A+G+  D  SY +++    + G   +  +    M ++G  LD     ++I  FC     
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS--- 634

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G + +A++LLEEM  KG +P V T+  +IDGL K    ++A+ LF +  +S     NV  
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF-EEAKSKAVDLNVVV 693

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y+++I G+ K  +++ A ++LE + ++GL PNT T+  L+    K    + A      M 
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK 753

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
              C PN   Y+ +++GLCK  +  +A+   ++  ++ L+ + ITYT ++S   +     
Sbjct: 754 NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVL 813

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           +A  LF R   +G  PD   Y  +I       K  ++   F+E    G
Sbjct: 814 EAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 10/329 (3%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P+ +T   M++ + K  K+  A  ++E M++    P  + YT+LI         +   
Sbjct: 163 FGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPML 222

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+  M + G    ++ +  +I    ++GRV  A  LL +       AD + Y + +   
Sbjct: 223 TLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCF 282

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +   A   F  +   GL PD   +T++I   C+ +++ E+ + F+E  +    P  
Sbjct: 283 GKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCV 342

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y +MI GY   G  + A    +R  + GC P  I Y  +++ L ++ K++EA +  E+
Sbjct: 343 YAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEA 402

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKR 624
           M     +P   +   L    CK G+   A+ + +S+ +      I TVN +I +LC  +R
Sbjct: 403 M-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQR 461

Query: 625 VGMAALFFHKLLGKDQNV---DRVSLAAL 650
           +  A   F   LG D  V   D V+  +L
Sbjct: 462 LDEACSIF---LGLDHKVCTPDSVTFCSL 487


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 1/327 (0%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + QA +LL+EM  KG KP+V T+ VLI+G+CK+G  ++A + FL  + S   +PNV T+ 
Sbjct: 98  VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK-FLNNMPSYGCQPNVITHN 156

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++   C   +   AE LL  M  +G  P+  T+  LI   C+ G   RA D+++ M   
Sbjct: 157 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 216

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GCTPN  +YN ++ G CK+ ++  A E L     R    D +TY  LL+   K  +   A
Sbjct: 217 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 276

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + +  ++   G +P +  Y T+I    +  K + + K   E    GL P   TY+S++ G
Sbjct: 277 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 336

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             R+G +  A+K+F  +  +G  P+ ITY +++ GLCK  + D A  F   MI K   P 
Sbjct: 337 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 396

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
           E T   L      +G +  A+ +L  L
Sbjct: 397 EATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 4/339 (1%)

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
           V   C+   V  A ++ DEM  +G   D  +Y +++   C+ GR+ EA ++L+ M   G 
Sbjct: 89  VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             +  T  +++ + C     G    A +LL +M+RKG  P+V T  +LI+ LC++G   +
Sbjct: 149 QPNVITHNIILRSMCST---GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 205

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  +  K+       PN  +Y  ++ G+CKE+KM+RA   L+ M  +G  P+  TY +L+
Sbjct: 206 AIDILEKMPMH-GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
              CK G  + A ++++ +  +GC+P +  YN +IDGL K G+ + A +LL +  ++ L+
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D ITY+ L+S   ++ +  +A+  F  +   G+ P+   Y +++   C+ ++   +  F
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
               I+    PT+ TYT +I G   +G    A+     +
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 152/294 (51%), Gaps = 1/294 (0%)

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK+    +A +L L  +R+   KP+V TY  +I+G CKE +++ A   L  M   G  PN
Sbjct: 93  CKESGVGQAMKL-LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 151

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             T+  ++   C  G +  A  L+  M ++GC+P++  +N +I+ LC++G +  A ++L+
Sbjct: 152 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 211

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K        + ++Y  LL    K+ +  +A+     MV  G  PDI  Y TL+ A C+  
Sbjct: 212 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 271

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+  + +   +  + G  P   TY ++I G  + G    A+K    M + G  PD ITY 
Sbjct: 272 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 331

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           +L+SGL ++ K+DEA +F+  + G GI P  +T  ++    CK   +  A+  L
Sbjct: 332 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 385



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 8/290 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S    GR  +   ++ +M   G      T N ++   C  GL+  A ++ ++M   G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              ++ SY  ++  +C+  ++  A  +L  M+ RG   D  T   L+TA C     G + 
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKD---GKVD 274

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+L ++  KG  P + T+  +IDGL K G TE+A +L L  +R    KP++ TY+++
Sbjct: 275 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL-LDEMRRKGLKPDIITYSSL 333

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +SG  +E K++ A      ++  G+ PN  TY S++ G CK    +RA D +  M  + C
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL----QADKITYTILL 444
            P    Y  +I+G+  +G  +EA +LL +   R L     A+++   +LL
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAAPVLL 443



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 4/310 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++   + GRL E    +  M + G      T N ++   C  G    AE++  +M  +G
Sbjct: 123 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 182

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 ++ +++   CR G +  A   L  M   G   ++ +   L+  FC +     + 
Sbjct: 183 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE---KKMD 239

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E L+ MV +G  P++ T+  L+  LCK G  + A  + L  + S    P + TY  +
Sbjct: 240 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI-LNQLSSKGCSPVLITYNTV 298

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G  K  K  RA  LL+ M+ +GL P+  TY+SL+ G  + G  + A      +   G 
Sbjct: 299 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 358

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   YN+I+ GLCK  +   A + L     +  +  + TYTIL+     +   K+AL 
Sbjct: 359 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 418

Query: 459 LFCRMVKAGL 468
           L   +   GL
Sbjct: 419 LLNELCSRGL 428



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 12/270 (4%)

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK+  V +A +LL +   +  + D +TY +L++   K+    +A+     M   G  P++
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             +  ++ + C   +  ++EK   + +  G  P+  T+  +I    R G +  A+   ++
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M   GC P++++Y  L+ G CK+ K+D A ++ + M+ +G  P  VT  TL    CK G 
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272

Query: 593 SATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A+ IL  L  K     + T NT+I  L    +   A     ++  K    D ++ ++
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 332

Query: 650 LKNACYESNKY----ALFSDLSQRIAEGIG 675
           L +      K       F DL     EG+G
Sbjct: 333 LVSGLSREGKVDEAIKFFHDL-----EGLG 357


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 210/433 (48%), Gaps = 5/433 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E G  ++ + +  +M ++GL   T+  N V+       L + A  +F EM   G
Sbjct: 323 LIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y +++   C+  ++ EA      M + G      T   L+  +C     G + 
Sbjct: 383 I-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC---VNGCMD 438

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  EM  KG+ PNV T+T L+ G   K   +KA+ L  ++ + +    N +TY  +
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM-KQNGVSCNDYTYNTL 497

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C   ++     +L+R + +G +P   TY S+I G  K G    A+ +   M  +G 
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  Y + IDG CK      A ++L     + L+ D   Y  L+    ++     AL 
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+K GL P+I  Y + I  +   K M+E+ +F+++ I  G+     TYT++I G+ 
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFS 677

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +DGN++ A+K +  M   G  PD+IT+ AL  GLC+   +D+A +  + M    I P  +
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737

Query: 579 TRVTLAYEYCKQG 591
               L   Y + G
Sbjct: 738 MYNMLINGYLRNG 750



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 209/410 (50%), Gaps = 5/410 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           K+  S+  EM ++G+P    T N ++   C+   +  A  ++++M   GV     +Y  +
Sbjct: 369 KDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           ++ YC  G + EA +  + M  +G   +  T T L+    +K    +  +A+ LL EM +
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA---AFDKAYALLAEMKQ 484

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G   N YT+  LI+GLC  G   +   + LK   ++ + P   TY ++I+G+ K   M 
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEM-LKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  + ++M  +G+ PN  TYTS I G+CK    + A  +++ +  +G  P+I AYN++I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G C++G +  A ++L    +  L  +   Y   ++ +      ++AL  + +M+K G++
Sbjct: 604 YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGID 663

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            D   YTTLI  F +   +  + K + E +  G  P   T+T++  G  R+G+I  A K 
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              MN++   P+ + Y  LI+G  +  KL EA + ++ M+ + I P + T
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 202/437 (46%), Gaps = 5/437 (1%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           +++   +  E   +GL     T   ++    E G+ E A E+  +M   G+    + + +
Sbjct: 298 VRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNM 357

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++          +A      M D G I D  T  +LI   C    R  I++A  L E+M 
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQ---RRKIREALNLWEKMN 413

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G KP + T+  L+   C  G  ++A +L+ ++     + PNV TYT ++ G+  +   
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM-PGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           ++A  LL  MK+ G+  N  TY +LI G C VG      +++     EG  P    YN+I
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I+G  K G +  A+ + ++   + +  + +TYT  +  + K +    AL +   +   GL
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PDI AY +LI  FC++  M  + +     +  GL P    Y S I GY     +  A++
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
           ++++M + G   D  TY  LI G  K   +  A + Y  M+ KG  P  +T   L +  C
Sbjct: 653 FYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 589 KQGDSATAMIILESLDK 605
           + GD   A  +L+ +++
Sbjct: 713 RNGDIDDARKLLDEMNR 729



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 202/439 (46%), Gaps = 5/439 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR++E   +  E+   G  +       ++   C    V  A ++F+E    G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y +++      G   +A      M D G +       ++I    +       K
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL---WK 369

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM   G  P+ +T+ +LI  LC++    +A  L+ K+  +   KP + TY ++
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSL 427

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC    M+ A  L   M  +G  PN  TYT+L+ GH     F++AY L+  M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + N Y YN +I+GLC  GRV E  E+LK+          +TY  +++  +K      A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ +M   G+ P+I  YT+ I  +C+      + K   +    GL P    Y S+I G+ 
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFC 607

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++GN+S A++    M + G  P+   Y + I+G      ++EA +FYE MI +GI     
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTA 667

Query: 579 TRVTLAYEYCKQGDSATAM 597
           T  TL   + K G+   A+
Sbjct: 668 TYTTLIDGFSKDGNVTFAL 686



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 176/382 (46%), Gaps = 4/382 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +++E  ++  +M   G+     T + ++   C  G ++ A +++ EM  +G   +  +Y 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  +       +A   L+ M   G   ++ T   LI   C     G + +  E+L+  
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC---VVGRVCEVGEMLKRF 517

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G+ P   T+  +I+G  K G    AF ++ ++  +    PN+ TYT+ I GYCK   
Sbjct: 518 ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC-AKGIPPNIVTYTSFIDGYCKTSC 576

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A  +L  ++ +GL P+   Y SLIYG C+ GN   A  ++ LM K+G  PNI  YN+
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
            I G      ++EA    +K  +  +  D  TYT L+    K      AL L+  MV  G
Sbjct: 637 FITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD   +T L    CR   + ++ K   E     + P    Y  +I GYLR+G +  A 
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756

Query: 528 KYFQRMNQIGCAPDNITYGALI 549
           +    M +    PD+ TY  L+
Sbjct: 757 RLHDEMLERKIMPDDTTYDILV 778



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 228/511 (44%), Gaps = 43/511 (8%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM- 236
           EM   G PL     + V+    + G+ + A  +FDEM A  +  D     + + + C++ 
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 237 ----------------------------------GRVTEADRWLSAMLDRGAILDNATLT 262
                                             GR+ EA      +L  G  +     T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+  +C    +  +++A ++ EE +R G  P   T+TVLI G  ++G  EKA+ L  + 
Sbjct: 287 TLMHGYC---LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYEL-CRQ 342

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R     P+ + +  +I G   ++    A  L + M + G +P+  TY  LI+  C+   
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L + M + G  P I  Y++++   C  G + EA +L  +   +    + +TYT 
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H+ +A   +A  L   M + G++ + + Y TLI   C   ++ E  +  +   T G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             PT  TY S+I G+++ G + SA   +Q+M   G  P+ +TY + I G CK S  D A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKL 619
           +    +  KG+ P      +L Y +C++G+ + A+ +L  + K   +  +   N+ I   
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            + K +  A  F+ K++ +  ++D  +   L
Sbjct: 642 KNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 188/428 (43%), Gaps = 8/428 (1%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M ARGV  DA S   ++    R     +A   L+ M  +G  LD     +++ A C K  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRA-CFK-- 189

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G    A  L +EM     +P+    +V I  LCK     +A  L L+ ++   + P   
Sbjct: 190 EGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL-LVLRKMQDAGFVPWDF 248

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+ +++    K  +M  A  + + +   G   +    T+L++G+C      +A D+ +  
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P    Y  +I G  ++G  ++AYEL ++     L      + +++   L     
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K A+ LF  M  +G+ PD   Y  LI   C+++K++E+   +++    G+ P   TY S+
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  Y  +G +  AVK +  M   G  P+ +TY  L+ G   ++  D+A      M   G+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAAL 630
           S  + T  TL    C  G       +L+  + + ++ T    N++I        +G A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 631 FFHKLLGK 638
            + ++  K
Sbjct: 548 VYQQMCAK 555



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 5/150 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V    ++ +  +  ++E      +M   G+ L T+T   ++    + G V +A +++ EM
Sbjct: 633 VYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGF 273
            A+G   D  ++  +    CR G + +A + L  M +R  I  N  +  +LI  +     
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRN-- 749

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
            G +++AF L +EM+ +   P+  T+ +L+
Sbjct: 750 -GKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 182/328 (55%), Gaps = 2/328 (0%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            +++ ++MVR G  PN++   VLI   CK G  EKA +L L  + S    P++ TY  +I
Sbjct: 206 VWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQL-LNEMESRFIFPDLFTYNTLI 264

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK-VGNFERAYDLMDLMGKEGC 398
           S YCK+     A  + +RM+  G+ P+  TY SLIYG C+ V + E A  L ++M  EG 
Sbjct: 265 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGL 324

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YN+I+  LC++G++++A  LL +  +R+++ D +T   L++ + K  +   A+ 
Sbjct: 325 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK 384

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +M++AGL PD   +  LI  FC+  ++  +++F  E + AG  P+  TY+ ++  Y 
Sbjct: 385 VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYY 444

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
              N  + ++    +++ G   D   Y ALI  LCK  K++ A + +  M GKG+    V
Sbjct: 445 DQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSV 504

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
              +LAY Y K G +  A  +L+ +DK+
Sbjct: 505 VYTSLAYAYFKAGKAIAASDMLDEMDKR 532



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 176/359 (49%), Gaps = 5/359 (1%)

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           T+ A ++F + +R   +KP++H  T +++   K    N    + ++M   G++PN + + 
Sbjct: 168 TQDAIQVF-EHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFN 226

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI+  CK G+ E+A  L++ M      P+++ YN +I   CKKG   EA  +  +  + 
Sbjct: 227 VLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERG 286

Query: 432 ELQADKITYTILLSEHLKQA-ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            +  D +TY  L+    ++  + ++AL L   M   GL+P +  Y +++   C + K+K+
Sbjct: 287 GVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 346

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + +   E     + P   T  ++I  Y + G++ SA+K  ++M + G  PD  T+ ALI 
Sbjct: 347 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIH 406

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---L 607
           G CK  ++D A +F   M+  G SP   T   L   Y  Q +    + + + L +K   +
Sbjct: 407 GFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFV 466

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
            I     LIR+LC   ++  A   F  + GK    D V   +L  A +++ K    SD+
Sbjct: 467 DISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 525



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 5/334 (1%)

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           L     +V+ +M   GV  +   + +++ A C+ G V +A++ L+ M  R    D  T  
Sbjct: 202 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 261

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK-GWTEKAFRLFLK 321
            LI+ +C KG      +A  + + M R G  P++ T+  LI G C++    E+A RL  +
Sbjct: 262 TLISLYCKKGMH---YEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRL-RE 317

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           ++  +   P V TY +++   C+E K+  A  LL  M E+ + P+  T  +LI  +CK+G
Sbjct: 318 VMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG 377

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           +   A  +   M + G  P+ + + A+I G CK   V  A E L +           TY+
Sbjct: 378 DMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYS 437

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+  +  Q   +  + L   + + GL  DI  Y  LI   C+  K++ +E+ F      
Sbjct: 438 WLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGK 497

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           G+      YTS+   Y + G   +A      M++
Sbjct: 498 GMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 531



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 13/351 (3%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   G+       N ++   C+ G VE AE++ +EM +R +  D  +Y  ++  YC+ G
Sbjct: 212 KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKG 271

Query: 238 RVTEA----DRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
              EA    DR     ++RG +  D  T   LI  FC +     +++A  L E M  +G 
Sbjct: 272 MHYEALGIQDR-----MERGGVSPDIVTYNSLIYGFCRE--VNDLEEALRLREVMEVEGL 324

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P V T+  ++  LC++G  + A RL L  +     +P+  T   +I+ YCK   M  A 
Sbjct: 325 HPGVVTYNSILRKLCEEGKIKDANRL-LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM 383

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            + ++M E GL P+  T+ +LI+G CK+   + A + +  M   G +P+   Y+ ++D  
Sbjct: 384 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 443

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
             +   +    L  +  ++ L  D   Y  L+    K  + + A  +F  M   G+  D 
Sbjct: 444 YDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDS 503

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
             YT+L  A+ +  K   +     E     L  T + Y      Y  DG+I
Sbjct: 504 VVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 554



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 150/330 (45%), Gaps = 5/330 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +   ++ +  + G +++   ++ EM +  +     T N ++ + C+ G+   A  + D 
Sbjct: 223 HIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDR 282

Query: 214 MCARGVCADASSYKLMVVAYCR-MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           M   GV  D  +Y  ++  +CR +  + EA R    M   G      T   ++   C++ 
Sbjct: 283 MERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE- 341

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G IK A  LL EM  +  +P+  T   LI+  CK G    A ++  K++ +   KP+ 
Sbjct: 342 --GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEA-GLKPDQ 398

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+ A+I G+CK  +++ A+  L  M + G  P+ +TY+ L+  +    N E    L D 
Sbjct: 399 FTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDE 458

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           + ++G   +I  Y A+I  LCK  +++ A  +      + ++ D + YT L   + K  +
Sbjct: 459 LSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGK 518

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
              A  +   M K  L   +  Y    A++
Sbjct: 519 AIAASDMLDEMDKRRLMITLKIYRCFSASY 548



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 8/303 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++S + + G   E   +   M   G+ P I +  + + G   E+  +E A  + + M   
Sbjct: 263 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVE 322

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     +Y  ++   C  G++ +A+R L+ M +R    DN T   LI A+C  G  GS 
Sbjct: 323 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS- 381

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A ++ ++M+  G KP+ +T   LI G CK    + A     +++ +  + P+  TY+ 
Sbjct: 382 --AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSW 438

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++  Y  ++       L + +  +GL  + + Y +LI   CK+   E A  +  LM  +G
Sbjct: 439 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 498

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              +   Y ++     K G+   A ++L +  +R L    IT  I        A     L
Sbjct: 499 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM---ITLKIYRCFSASYAGDGSIL 555

Query: 458 GLF 460
           GLF
Sbjct: 556 GLF 558



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 13/234 (5%)

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-AFQRELQ-ADKITYTILLSEHLKQAET 453
           +GC  +   +  +   L  K  +Q ++ ++   A  ++ + A  +   I + ++L     
Sbjct: 78  DGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSV 137

Query: 454 KQALGLFCRMVKAGLNPDIHA--YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
             A+      V+   +PD ++   + L+  +   +  +++ + F+     G  P     T
Sbjct: 138 LNAV------VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACT 191

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            ++    +    +   K +++M ++G  P+   +  LI   CK   +++A Q    M  +
Sbjct: 192 VLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESR 251

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSE 622
            I P   T  TL   YCK+G    A+ I + +++      I T N+LI   C E
Sbjct: 252 FIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCRE 305


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 230/485 (47%), Gaps = 9/485 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           ++S     G+LK+  +++  M  NG +P I S  N ++   C+ G  ++A  +   M  +
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVS-YNTLLSWCCKKGRFKFALVLIHHMECK 239

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+ AD  +Y + + + CR  R  +    L  M ++    +  +   LI  F  +G  G  
Sbjct: 240 GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVA 299

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + F    EM+     PN+ T+ +LI+G C  G  E+A RL L ++ +++ +PN  T   
Sbjct: 300 TRVFN---EMIELNLSPNLITYNILINGYCINGNFEEALRL-LDVMEANDVRPNEVTIGT 355

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++G  K  K + A  +LER        N  ++T +I G C+ G  + A+ L+  M K+G
Sbjct: 356 LLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  ++ +I+G CK G + +A E++ K ++     + + ++ L+    K     + +
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             +  M   G N D     +L+A+ C   K+ E+E+F       GL P   T+  +I GY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G+ S A   F +M   G  P   TYG+L+  LCK     EA +  + +    ++   
Sbjct: 536 ANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHK 634
           ++  TL  E  K G+   A+ + E + +   +    T   ++  L  E R+  A +F  +
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 635 LLGKD 639
           L+ K+
Sbjct: 656 LMQKE 660



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 189/393 (48%), Gaps = 4/393 (1%)

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
           F +M    VC + SS+ +++   C  G++ +A   L+ M   G +    +   L++  C 
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
           KG     K A  L+  M  KG + +V T+ + ID LC+   + + + L LK +R+    P
Sbjct: 223 KG---RFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGY-LVLKKMRNKMITP 278

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
           N  +Y  +I+G+ KE K+  A  +   M E  L PN  TY  LI G+C  GNFE A  L+
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLL 338

Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
           D+M      PN      +++GL K  +   A  +L++        + I++T+++    + 
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRN 398

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               +A  L   M K G+ PDI  ++ LI  FC+   + ++++   +    G  P    +
Sbjct: 399 GLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIF 458

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +++I    + GN+   +K++  MN  G   DN T  +L++ LC+  KL EA +F   +  
Sbjct: 459 STLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISR 518

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            G+ P  VT   +   Y   GD + A  + + +
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM 551



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 211/448 (47%), Gaps = 5/448 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + S     R  +G+ ++ +M N  +     + N ++    + G +  A  VF+EM    +
Sbjct: 252 IDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             +  +Y +++  YC  G   EA R L  M       +  T+  L+              
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSA---KFDV 368

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  +LE         N  +HTV+IDGLC+ G  ++AF+L +++ + D   P++ T++ +I
Sbjct: 369 ARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCK-DGVYPDIITFSVLI 427

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G+CK   +N+A+ ++ ++  +G +PN   +++LIY  CKVGN          M   G  
Sbjct: 428 NGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQN 487

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            + +  N+++  LC+ G++ EA E L    +  L  + +T+  +++ +    +   A  +
Sbjct: 488 ADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSV 547

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M+  G +P    Y +L+   C+ +   E+ K  ++     L     +Y ++I    +
Sbjct: 548 FDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISK 607

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            GN+  AV+ F+ M Q    PD+ TY  ++SGL ++ +L  A  F   ++ K I      
Sbjct: 608 SGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSI 667

Query: 580 RVTLAYE-YCKQGDSATAMIILESLDKK 606
             T   +   K G S  A+ + + +++K
Sbjct: 668 VYTCFIDGLFKAGQSKAALYLFKEMEEK 695



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 186/404 (46%), Gaps = 7/404 (1%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A   LLI  +  +G  G    A      M+ +G+KP+VYT  +++  + K       +  
Sbjct: 106 AVFDLLIRVYLRQGMVG---HAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXF 162

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +++ S    PNV ++  +IS  C + K+ +A  +L  M+  G +P   +Y +L+   C
Sbjct: 163 FKQMLTS-RVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G F+ A  L+  M  +G   ++  YN  ID LC+  R  + Y +LKK   + +  +++
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +Y  L++  +K+ +   A  +F  M++  L+P++  Y  LI  +C     +E+ +     
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               + P + T  +++ G  +      A    +R +    + + I++  +I GLC+   L
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLL 401

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTL 615
           DEA Q    M   G+ P  +T   L   +CK G+   A  ++  + ++ ++      +TL
Sbjct: 402 DEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           I   C    V     F+  +    QN D  +  +L  +  E+ K
Sbjct: 462 IYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 12/521 (2%)

Query: 157  QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             C+++ +A +G     FS+  +M + G      T   ++ + C+      A ++  ++  
Sbjct: 529  DCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 217  RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
              +  D  SY  ++V   + G + EA R    M+    + D+ T T +++    +   G 
Sbjct: 589  IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE---GR 645

Query: 277  IKQAFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  AF  L  +++K     N   +T  IDGL K G ++ A  LF K +       ++   
Sbjct: 646  LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLF-KEMEEKGLSLDLIAL 704

Query: 336  TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++  GY +  K+  A  L+ + + + ++PN  T+  L++G+ +  +    + L +LM +
Sbjct: 705  NSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR 764

Query: 396  EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
             G  PN   Y+++I GLC  G ++   ++LK         D +T+ +L+ +  +  +  +
Sbjct: 765  SGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDK 824

Query: 456  ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
             + L   M    ++ D      +     R+   +    F  E +  G  PT + Y +M+ 
Sbjct: 825  VIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 516  GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
               R G+I  A K   +M  +G + D+    A++ GL    K++EA    + M+     P
Sbjct: 885  RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIP 944

Query: 576  CEVTRVTLAYEYCKQGDSATAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
               T  TL + +CK+ +   A    I++E    KL I   N LI   C+   V  A  F+
Sbjct: 945  TTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFY 1004

Query: 633  HKLLGK----DQNVDRVSLAALKNACYESNKYALFSDLSQR 669
             ++  K    +    RV ++A+    Y S    +  DL+ R
Sbjct: 1005 EEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1045



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 35/271 (12%)

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           N   +  LI  + + G    A +    M   G  P++Y  N I+  + K  R    +   
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           K+     +  +  ++ IL+S    Q + K+A+ +   M + G  P I +Y TL++  C++
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 486 KKMK---------ESEKFFQEAITAGLF--------------------------PTKETY 510
            + K         E +    +  T  +F                          P + +Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
            ++I G++++G I  A + F  M ++  +P+ ITY  LI+G C     +EA +  + M  
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEA 343

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             + P EVT  TL     K      A  ILE
Sbjct: 344 NDVRPNEVTIGTLLNGLYKSAKFDVARNILE 374



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 3/275 (1%)

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+ N   ++ +I    ++G V  A         R  +    T  ++++  +K        
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F +M+ + + P++ ++  LI+  C Q K+K++          G  PT  +Y +++   
Sbjct: 161 XFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            + G    A+     M   G   D  TY   I  LC+ S+  +     + M  K I+P E
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 578 VTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V+  TL   + K+G    A  +      L+    + T N LI   C       A      
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           +   D   + V++  L N  Y+S K+ +  ++ +R
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILER 375


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 236/466 (50%), Gaps = 22/466 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  ++G L++ +  + +M ++G+ +    +  ++    +LG++      F +    G
Sbjct: 340 LIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLG 399

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y + + AYC++G + EA + L+ M+  G + D    T LI  +C    +G  +
Sbjct: 400 LHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYC---LKGETE 456

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+++ E+M++   KP+V T+ +L  G  + G   K F L L+ +     +PN  TY   
Sbjct: 457 NAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDL-LEHMMDQGLEPNSLTYGIA 515

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C+   ++ AE+L   ++E+G+      Y+S++ G+   G  + AY L   + K+G 
Sbjct: 516 IAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGN 575

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +  + + +I+GLC+  +VQEA  +     ++ +    I+Y+ L+S + +  + + A  
Sbjct: 576 MVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHL 635

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  MV+ GL+ D+ AYT L+  +C+  +++E+ + F + +  G+ P    YT ++ G+L
Sbjct: 636 WFHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHL 694

Query: 519 RD-------GNISSAVKYFQR---------MNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           ++       G       +F R         M ++   PD   Y  LI G CK   L+EA 
Sbjct: 695 KETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEAR 754

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL 607
             ++ M+ KG++P      TL   YC QG+ A A  +  E +DK +
Sbjct: 755 GLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGM 800



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 196/405 (48%), Gaps = 21/405 (5%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ ++G + E   ++ EM   GL         ++   C  G  E A +VF++M    +
Sbjct: 411 MDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANI 470

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y ++   Y R G V +    L  M+D+G   ++ T  + I  FC  G     + 
Sbjct: 471 KPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEV 530

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F ++EE   KG       ++ ++ G    GWT+ A+ LFL++ +  N   ++ + + +I
Sbjct: 531 LFNIVEE---KGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHL-SCSKLI 586

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C++EK+  A  +   M E+ ++P+  +Y+ LI  +C+  +   A+     M + G +
Sbjct: 587 NGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLS 646

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-------QAE 452
            ++ AY  +++G CK G++QEA EL  +     ++ D + YT+LL  HLK       Q  
Sbjct: 647 -DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGI 705

Query: 453 TKQALGLFCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            K+    F R         M +  + PD+  YT LI   C+ + ++E+   F E +  GL
Sbjct: 706 AKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGL 765

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            P  + YT++I GY   G I+ A   FQ M   G  PD +++  L
Sbjct: 766 TPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL 810



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 249/579 (43%), Gaps = 47/579 (8%)

Query: 123 AIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN 182
           A+ FA F+           SL  + +F    E++Q +  SF +   L   F  ++  T++
Sbjct: 80  AVAFAYFKD--------THSLGFHHDFSTYSEIIQILSHSF-QGKMLVSLFCEILSGTDS 130

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV--- 239
           G P I + ++ +        ++ YA     +  A   C DA     M    CR+G V   
Sbjct: 131 GGPEILALIDHLRKTCATSHVLSYAVNCLIK--AYTTCHDAQETVDMFCHLCRLGFVPTL 188

Query: 240 ------------TEADRWLSAMLDR----GAILDNATLTLLITAFCDKGFRGS-IKQAFE 282
                       +     + A  DR       LD  +L ++  +     F+ +   +AF 
Sbjct: 189 WACNFLLKFVSQSSDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSL----FQANKADEAFR 244

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-----LKLVRSDNYKPNVHTYTA 337
           +   M+  G K +V  ++  I GLC  G  + A+ +      L+ +  +        Y  
Sbjct: 245 VWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNM 304

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G CKE K+  AE +LE     G  P+   Y+ LI+ HCK+GN E+A+  ++ M   G
Sbjct: 305 VIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHG 364

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N +   +++  L K G + E     +K     L  D + Y + +  + K     +A+
Sbjct: 365 IEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAV 424

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M+  GL PD   YT LI  +C + + + + + F++ + A + P   TY  +  GY
Sbjct: 425 KLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGY 484

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R+G +       + M   G  P+++TYG  I+G C+   L EA   +  +  KGI   +
Sbjct: 485 SRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNID 544

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           V   ++   Y   G +  A ++   + K+   +   + + LI  LC +++V  A+     
Sbjct: 545 VLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSM 604

Query: 635 LLGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           +L K+     +S + L +A  +S    N +  F D+ +R
Sbjct: 605 MLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVER 643



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 21/307 (6%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ F   G L E   +   +   G+  I    + +V      G  ++A  +F  +  +G 
Sbjct: 516 IAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGN 575

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  S   ++   CR  +V EA    S ML++  +    + + LI+A+C       ++ 
Sbjct: 576 MVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSR---DMRN 632

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A     +MV +G   +V  +T+L++G CK G  ++A  LF+++V     KP+V  YT ++
Sbjct: 633 AHLWFHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNL-GIKPDVVAYTVLL 690

Query: 340 SGYCKEEKMN----------------RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            G+ KE                    + ++LL  MKE  + P+   YT LIYG CK    
Sbjct: 691 DGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYL 750

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E A  L D M  +G TP++ AY  +I+G C +G + +A +L ++   + ++ D +++++L
Sbjct: 751 EEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL 810

Query: 444 LSEHLKQ 450
               L+ 
Sbjct: 811 HQRTLRH 817



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 19/265 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV  +   G     + + + +   G  +   + ++++   C    V+ A  V   M  + 
Sbjct: 550 MVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKN 609

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     SY  ++ AYC+   +  A  W   M++RG + D    T+L+  +C     G ++
Sbjct: 610 VVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG-LSDVTAYTILMNGYCKV---GQLQ 665

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK----KGWTEKA-----------FRLFLKLV 323
           +A EL  +MV  G KP+V  +TVL+DG  K    +GW   A            ++ L  +
Sbjct: 666 EACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSM 725

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +    +P+V  YT +I G CK E +  A  L + M  +GL P+ + YT+LI G+C  G  
Sbjct: 726 KEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEI 785

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A DL   M  +G  P++ +++ +
Sbjct: 786 AKAEDLFQEMIDKGMKPDVLSFSVL 810


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 187/358 (52%), Gaps = 4/358 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E+FDEM  RG+     +Y  ++ A    G V +A      M+ R    +  T T +I 
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMIC 221

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C++G  G  ++ F+ ++E    G +PN YT+ VL+ G C+      AF L+ +L+ S 
Sbjct: 222 VLCEEGCIGDAERLFDAMKE---AGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS- 277

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PN   +T +I G+CK ++ + A+ +   M   G+ P    Y SL+ G  + G+ + A
Sbjct: 278 GLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEA 337

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L   M + G  P+ +  + ++ GLC  G++Q A   L+   +  +  +   Y  L+ E
Sbjct: 338 LSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDE 397

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           + +    ++AL    RM + G+ P++ +Y++LI    +  KM+ +   + E +  G+ P 
Sbjct: 398 YCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPN 457

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
             TYT++I G+ ++G I +A ++ + M + G +P+ IT   L+ GLC+++++ +A +F
Sbjct: 458 VVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF 515



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 197/419 (47%), Gaps = 20/419 (4%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ- 279
           + A +  ++V+A  +MG           +LD    +     TL     C+    G +K  
Sbjct: 109 SPAPALGVLVIALSQMG-----------LLDEALYVFRRLWTLPALPACNAVLDGLVKAR 157

Query: 280 ----AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A+EL +EM+R+G  P+V T+  LI+    +G   KA  ++ ++V +    PNV TY
Sbjct: 158 RSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMV-ARQIDPNVITY 216

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T+MI   C+E  +  AE L + MKE G+ PN  TY  L+ GHC+  +   A+ L   +  
Sbjct: 217 TSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLN 276

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN   +  +IDG CK  R  EA ++ +   +  +      Y  L+    +  + ++
Sbjct: 277 SGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQE 336

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL L+  M + GL PD    + ++   C   +++ + +F +     G+      Y ++I 
Sbjct: 337 ALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALID 396

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            Y R+GN+  A+    RM ++G  P+ ++Y +LI G  K  K+  A   Y  M+ KGI P
Sbjct: 397 EYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEP 456

Query: 576 CEVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIR--TVNTLIRKLCSEKRVGMAALF 631
             VT   L + + K G    A     E ++  +     TV+ L+  LC E RV  A  F
Sbjct: 457 NVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF 515



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 184/403 (45%), Gaps = 21/403 (5%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   ++ + CE G +  AE +FD M   G+  +  +Y +++  +C+   V  A      +
Sbjct: 215 TYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL 274

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           L+ G I +    T LI  FC K  R S  +A ++  +M R G  P V  +  L+DG  + 
Sbjct: 275 LNSGLIPNAVVFTTLIDGFC-KAKRFS--EAKDMFRDMPRFGVAPTVPVYNSLMDGAFRS 331

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  ++A  L+ ++ R     P+  T + ++ G C   ++  A   LE ++E G+  N   
Sbjct: 332 GDAQEALSLYQEMTRL-GLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAA 390

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y +LI  +C+ GN E A      M + G  PN+ +Y+++IDG  K G++Q A  +  +  
Sbjct: 391 YNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMV 450

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + ++ + +TYT L+  H K      A      M++ G++P+    + L+   CR+ +++
Sbjct: 451 AKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQ 510

Query: 490 ESEKFFQE-----------------AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           ++ +F  E                      L P    Y ++I G   DG    A K F  
Sbjct: 511 DAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSY 570

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           M + G   D+ TY  LI G C    +  A   Y  M+  G+ P
Sbjct: 571 MRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 115/289 (39%), Gaps = 56/289 (19%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G  +E  S+  EMT  GL     T + VV   C+ G ++ A    + +   GV  +A++Y
Sbjct: 332 GDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAY 391

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  YCR G + EA    + M + G   +  + + LI         G ++ A  +  E
Sbjct: 392 NALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSK---LGKMQIAMAIYTE 448

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           MV KG +PNV T+T LI G  K G  + AFR F K +  +   PN  T + ++ G C+E 
Sbjct: 449 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFR-FHKEMIENGISPNAITVSVLVDGLCREN 507

Query: 347 KMN----------------------------------------------------RAEML 354
           ++                                                      A  L
Sbjct: 508 RVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKL 567

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
              M++ G++ ++ TYT LI G C +G    A  L   M K G  P  Y
Sbjct: 568 FSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPMRY 616


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/548 (24%), Positives = 242/548 (44%), Gaps = 33/548 (6%)

Query: 94  SLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAH 153
           S + +  I+V+ S      S  AL  FY    F + +  +++Y     +L+    F+  +
Sbjct: 108 SCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHILDALLDENRFQMIN 166

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +                       M  +G+     T N ++   C+   V+ A ++  E
Sbjct: 167 PIYS--------------------NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVE 206

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M ++G   D  SY  ++ + C++G+V EA R L+        + NA    LI   C +  
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEA-RELAMSFTPSVPVYNA----LINGVCKEY- 260

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             + ++AF+LL+EM+ KG  PNV ++T +I+ L   G  E +  +  K+  +    PN+H
Sbjct: 261 --TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF-ARGCSPNLH 317

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+T++I G+  +   + A    +RM  +G++PN   Y +L++G C   +   A  + + M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              GC PN+  Y+A+IDG  K G +  A E+           + + YT ++    + +  
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            QA  L   M      P+   + T I   C   ++  + K F +   +G FP   TY  +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +   L+D     A    + M   G   + +TY  +I G C    L EA +    M+ +G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAAL 630
            P  +T   +   YCKQG    A+ +++ L    W   I    +LI  +C+   V  A +
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 631 FFHKLLGK 638
           +  ++L +
Sbjct: 618 YLRRMLSE 625



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 199/417 (47%), Gaps = 9/417 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS  ++G++KE   + +  T + +P+  + +N V    C+    E A ++ DEM  +G
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPS-VPVYNALINGV----CKEYTFEEAFQLLDEMMNKG 276

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  ++ A    G V  +   L+ M  RG   +  T T LI  F     +G   
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF---LKGGSH 333

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +  + M+R+G  PNV  +  L+ GLC K     A  +F ++   +   PNV TY+A+
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSAL 392

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K   ++ A  +   M   G  PN   YT ++   C+   F +AY L++ M  E C
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +N  I GLC  GRV  A ++  +        +  TY  LL   LK     +A G
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G+  ++  Y T+I  +C    + E+ +   + +  G  P   T   +I  Y 
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYC 572

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + G ++ A++   R++     PD I Y +LISG+C    ++EA  +   M+ +GISP
Sbjct: 573 KQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 8/324 (2%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   F  +  S ++K    TY  MI     E +M+  + LL++MK +G+  + + + S+I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + + G+ E+A      M      P +  YN I+D L  + R Q    +     +  ++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY ILL    K      A  L   M   G +PD  +YTTLI++ C+  K+KE+ + 
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE- 237

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
               +     P+   Y ++I G  ++     A +    M   G  P+ I+Y  +I+ L  
Sbjct: 238 ----LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-- 612
              ++ +      M  +G SP   T  +L   +  +G S  A+   + + ++  +  V  
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353

Query: 613 -NTLIRKLCSEKRVGMAALFFHKL 635
            N L+  LCS++ +G A   F+++
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQM 377


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 207/453 (45%), Gaps = 30/453 (6%)

Query: 141 TSLISNG---NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
             ++SNG   N      ++QC+     E+G   E      E  ++G+ L     N VV  
Sbjct: 356 NDMVSNGIKTNCVIVSSILQCL----CEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDA 411

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
            C+LG VE A E+ +EM  R +  D   Y  ++  YC  G++ +A      M +RG   D
Sbjct: 412 LCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPD 471

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T  +L+  F   G +   K+A ELL+ +  +G KPN  TH  +I+GLC  G  ++A  
Sbjct: 472 IVTYNILVGGFSRNGLK---KEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-E 527

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            FL  +        +  Y+AM+ GYCK     +A  L  R+ +QG+L    +   L+   
Sbjct: 528 AFLNTLED----KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSL 583

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C  G +++A  L++ M      PN   Y  +I   C+ G ++ A  +     +R +  D 
Sbjct: 584 CMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDV 643

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK----------K 487
           ITYT++++ + +    ++A  +F  M + G+ PD+  YT ++    +            K
Sbjct: 644 ITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSK 703

Query: 488 MKESEK-----FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
             E EK     F+ E    G+ P    YT +I  + +  N+  A+  +  M   G  PD 
Sbjct: 704 GSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDI 763

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           +TY AL+S  C +  +D A      M  KGI P
Sbjct: 764 VTYTALLSSCCSRGDMDRAITLVNEMSFKGIEP 796



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 241/588 (40%), Gaps = 110/588 (18%)

Query: 124 IGFAKFRHFMRL--------YIVCATSLISNGNFERAHEVMQCM---------------V 160
           +  A +RH  RL        Y +   +L   GNFE A +V + M               +
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 161 SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGV 219
                  R   G+  +  +     P+ T     V+ G   E+ L E AE+VF +M   G+
Sbjct: 270 EGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKE-AEDVFIDMVNEGI 328

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++ AYC+ G + +A    + M+  G   +   ++ ++   C+ G    +  
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVD 388

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F   +E    G   +   + +++D LCK G  E+A  L L  ++      +V  YT +I
Sbjct: 389 QF---KEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVEL-LNEMKGRRMSLDVVHYTTLI 444

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +GYC + K+  A+ + E MKE+G+ P+  TY  L+ G  + G  + A +L+D +G +G  
Sbjct: 445 AGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLK 504

Query: 400 PNIYAYNAIIDGLCKKGRVQE-------------------------------AYELLKKA 428
           PN   +N II+GLC  G+V+E                               AYEL  + 
Sbjct: 505 PNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRL 564

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ +   K +   LLS    + E  +AL L  RM+   + P+   Y  LI AFCR   M
Sbjct: 565 SKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDM 624

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLR----------------------------- 519
           K ++  F   +  G+ P   TYT MI GY R                             
Sbjct: 625 KRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVV 684

Query: 520 -DGNISSAVK--------------------YFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            DG+    +K                    ++  M ++G  PD + Y  LI   CK + L
Sbjct: 685 LDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNL 744

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            +A   Y+ MI +G+ P  VT   L    C +GD   A+ ++  +  K
Sbjct: 745 QDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFK 792



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 189/400 (47%), Gaps = 11/400 (2%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           ++ T  + I A C KG   + ++A ++  EM   G  PN  T +  I+GLC    ++  +
Sbjct: 226 NDYTYGIFIKALCRKG---NFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
              L+ +R+ N+  +   YTA+I G+C E K+  AE +   M  +G+ P+   Y +LI+ 
Sbjct: 283 EA-LRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           +CK GN  +A  L + M   G   N    ++I+  LC+ G   E  +  K+     +  D
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
           ++ Y I++    K  + ++A+ L   M    ++ D+  YTTLIA +C Q K+ +++  F+
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E    G+ P   TY  ++ G+ R+G    A++    +   G  P++ T+  +I GLC   
Sbjct: 462 EMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVN 613
           K+ EA  F  ++  K    C      +   YCK   +  A  +   L K+  +   ++  
Sbjct: 522 KVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            L+  LC E     A +   ++L  D   +++    L  A
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGA 617



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 25/347 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F+  G  KE   ++  +   GL   ++T NR++   C  G V+ AE   + +  + 
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC 537

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y  MV  YC+     +A    S +  +G ++   +   L+++ C     G   
Sbjct: 538 L----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLC---MEGEYD 590

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LLE M+    +PN   +  LI   C+ G  ++A  +F  LV      P+V TYT M
Sbjct: 591 KALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER-GITPDVITYTMM 649

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-- 396
           I+GYC+   +  A  +   MKE+G+ P+  TYT ++ GH KV N + A  L    G E  
Sbjct: 650 INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEEE 708

Query: 397 --------------GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
                         G  P++  Y  +ID  CK   +Q+A  L  +   R LQ D +TYT 
Sbjct: 709 KMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTA 768

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           LLS    + +  +A+ L   M   G+ PD  A + L     + +K++
Sbjct: 769 LLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 15/282 (5%)

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F   ++   ++ NV TY A+I   C+          LER K Q LL         + G  
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWR--------LER-KLQSLLSEIVGSKESVLGFD 133

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               F+   +    +  E  +  I   + ++    + G   EA + L +  +R      +
Sbjct: 134 ITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIM 193

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +   L++  ++  +   A+ ++  + + GLNP+ + Y   I A CR+   +E+   F+E 
Sbjct: 194 SCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM 253

Query: 499 ITAGLFP---TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
             AG+ P   T  TY   +C + R      A++  +  N      D   Y A+I G C +
Sbjct: 254 EEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANW---PIDTFAYTAVIRGFCSE 310

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            KL EA   +  M+ +GI+P       L + YCK G+   A+
Sbjct: 311 MKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 207/396 (52%), Gaps = 6/396 (1%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ E+M     KP+++  TVL++ L K G T   ++++ ++V+ D   PN++ Y  +
Sbjct: 148 DAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQ-DGVVPNIYVYNCL 206

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I    K   + RAE +L  M+ +G++P+  TY +LI  +CK G    A  + D M +EG 
Sbjct: 207 IHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGI 266

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +I +YN++I G CK+G+++EA  +  +   ++   + +TYT L+  + K  E ++AL 
Sbjct: 267 NLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALR 324

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   MV  GL P +  Y +++   C   +++++ K   E     +     T  ++I  Y 
Sbjct: 325 LREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYC 384

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+++SA+K+  +M + G  P++ TY ALI G CK S+L+ A +    M+  G SP   
Sbjct: 385 KIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYR 444

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T   +   YCK+ ++   + + +    K   L I     LIR+LC  +R+  A    + +
Sbjct: 445 TYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHM 504

Query: 636 LGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
            GK  + D V   +L  + ++S      SD+ + +A
Sbjct: 505 EGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMA 540



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 242/495 (48%), Gaps = 11/495 (2%)

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
           FF WA     + H +         L  + +F+ A +V+  M     EI       + ++ 
Sbjct: 64  FFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQR--EILSSPSVLTSLVR 121

Query: 179 MTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           + ++  P + S  L+ +V    +  +   A +VF++M    +     +  +++ +  + G
Sbjct: 122 IHDD--PEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDG 179

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
             +   +    M+  G + +      LI A C K     +++A  +L EM  KG  P+++
Sbjct: 180 ITSMVWKVYKRMVQDGVVPNIYVYNCLIHA-CSKS--RDVERAEFILNEMEVKGVVPDIF 236

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+  LI   CKKG   +A  +  K+ R +    ++ +Y ++I G+CKE KM  A  +   
Sbjct: 237 TYNTLIALYCKKGLHYEALSVQDKMER-EGINLDIVSYNSLIYGFCKEGKMREAMRMFGE 295

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           +K+   +PN  TYT+LI G+CK   FE A  L ++M  +G  P +  YN+I+  LC  GR
Sbjct: 296 IKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGR 353

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +++A +LL +  +R++QAD +T   L++ + K  +   AL    +M++AGL P+   Y  
Sbjct: 354 IRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKA 413

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  FC+  +++ +++     + AG  P   TY+ ++  Y +  N  + +         G
Sbjct: 414 LIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKG 473

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
              +   Y ALI  LCK  +++ A +    M GKGIS   V   +LA+ Y K G++  A 
Sbjct: 474 FCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAAS 533

Query: 598 IILESLDKKLWIRTV 612
            +LE + ++  + TV
Sbjct: 534 DMLEEMARRRLMITV 548



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 41/390 (10%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V  C++ + ++   ++    ++ EM   G+     T N ++ + C+ GL   A  V D+M
Sbjct: 202 VYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKM 261

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+  D  SY  ++  +C+ G++ EA R    + D  AI ++ T T LI  +C     
Sbjct: 262 EREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTTLIDGYCKAN-- 317

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYK- 329
              ++A  L E MV KG  P V T+  ++  LC  G    A +L  ++    V++D+   
Sbjct: 318 -EFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTC 376

Query: 330 -----------------------------PNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
                                        PN  TY A+I G+CK  ++  A+ LL  M +
Sbjct: 377 NTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLD 436

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G  PN  TY+ ++  +CK  N +    L D    +G   NI  Y A+I  LCK  R++ 
Sbjct: 437 AGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIEC 496

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A +LL     + +  D + YT L   + K   T  A  +   M +  L   +  Y    A
Sbjct: 497 AEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCFSA 556

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETY 510
               Q K+  S+ F+   +  GL      Y
Sbjct: 557 LDASQNKV--SQMFWDHVVERGLMSRNTMY 584



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 24/339 (7%)

Query: 319 FLKLVRS-DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           F K  +S  +Y  ++H+  +MI    K      A+ +L++M ++ +L + +  TSL+   
Sbjct: 64  FFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLV--- 120

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
                  R +D  ++        N +  + I+    K     +A ++ ++     L+   
Sbjct: 121 -------RIHDDPEV--------NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHL 165

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
              T+L++  LK   T     ++ RMV+ G+ P+I+ Y  LI A  + + ++ +E    E
Sbjct: 166 HACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNE 225

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
               G+ P   TY ++I  Y + G    A+    +M + G   D ++Y +LI G CK+ K
Sbjct: 226 MEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGK 285

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNT 614
           + EA + +  +  K   P  VT  TL   YCK  +   A+ + E +  K L+  + T N+
Sbjct: 286 MREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNS 343

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           ++RKLCS+ R+  A    H++  +    D V+   L NA
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINA 382


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + +V   C  G+VE A +V ++M   G  A+ +   +++   C+ GRV +A ++L+ M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C +  R   + A ELL+EMVRK   PN  T    I  LC+K
Sbjct: 347 GSYGCSPDTISYTTVLKGLC-RAERW--EDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A  + ++ +     + N+ TY A+++G+C + +++ A   LE        PNT T
Sbjct: 404 GLIEQA-TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTIT 459

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M ++ C PN+  +N ++   C+KG + EA EL+++  
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + ITY  LL        +++AL L   +V  G++PDI  Y+++I    R+ +++
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ K F      G+ P    Y  ++    +  N   A+ +F  M   GC P+ +TY  LI
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L E       +  +G+
Sbjct: 640 EGLANEDFLKETRDLLRELCSRGV 663



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 23/463 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     GR+ +    +  +++ G    T +   V+   C     E  EE+F EM  + 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++ ++V  +CR G V  A + L  M   G   +     ++I   C +G    + 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG---RVD 337

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            AF+ L  M   G  P+  ++T ++ GLC+    E A  L  ++VR  N  PN  T+   
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPPNEVTFNTF 396

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++  + +A ML+E+M E G   N  TY +L+ G C  G  + A +L   M    C
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 453

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   Y  ++ GLC   R+  A ELL +  Q++   + +T+ +L+S   ++    +A+ 
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L  +M++ G  P++  Y TL+         +E+ +     ++ G+ P   TY+S+I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+  +  A+K F  +  +G  P  + Y  ++  LCK+   D A  F+  M+  G  P E+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCS 621
           T +TL                +E L  + +++    L+R+LCS
Sbjct: 634 TYITL----------------IEGLANEDFLKETRDLLRELCS 660



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 192/412 (46%), Gaps = 10/412 (2%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA R +     RG   D    T LI   C    RG    A  +L    R G   +V+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCR---RGRTSDAARVLRAAERSGTAVDVFA 115

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  L+ G C+ G  + A RL    + S    P+ +TYT +I G C   ++  A  LL+ M
Sbjct: 116 YNTLVAGYCRYGQLDAARRL----IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G  P+  TYT L+   CK   F +A +++D M  +GCTPNI  YN II+G+C++GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A E L +      Q D ++YT +L         +    LF  M++    P+   +  L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +  FCR   ++ + +  ++    G          +I    + G +  A ++   M   GC
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           +PD I+Y  ++ GLC+  + ++A +  + M+ K   P EVT  T     C++G    A +
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 599 ILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           ++E + +   ++ I T N L+   C + RV  A   F+ +  K   +   +L
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTL 463



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 206/438 (47%), Gaps = 10/438 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G V  A  + D+M  RG      +Y +++ A C+     +A   L  M  +G   + 
Sbjct: 156 CDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNI 215

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  ++I   C +   G +  A E L  +   G++P+  ++T ++ GLC     E    L
Sbjct: 216 VTYNVIINGMCRE---GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +++   N  PN  T+  ++  +C+   + RA  +LE+M   G   NT     +I   C
Sbjct: 273 FAEMMEK-NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G  + A+  ++ MG  GC+P+  +Y  ++ GLC+  R ++A ELLK+  ++    +++
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+   +    ++   +QA  L  +M + G   +I  Y  L+  FC Q ++  + + F   
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF--- 448

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            +    P   TYT+++ G      + +A +    M Q  CAP+ +T+  L+S  C++  +
Sbjct: 449 YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTL 615
           DEA +  E M+  G +P  +T  TL        +S  A+ +L  L        I T +++
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSI 568

Query: 616 IRKLCSEKRVGMAALFFH 633
           I  L  E RV  A   FH
Sbjct: 569 IGVLSREDRVEEAIKMFH 586



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 201/436 (46%), Gaps = 13/436 (2%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  + D   +RG   D      ++   CR GR ++A R L A    G  +D      L+ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            +C  G    +  A  L+  M      P+ YT+T +I GLC +G   +A  L   ++   
Sbjct: 122 GYCRYG---QLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 174

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
             +P+V TYT ++   CK     +A  +L+ M+ +G  PN  TY  +I G C+ G  + A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            + ++ +   G  P+  +Y  ++ GLC   R ++  EL  +  ++    +++T+ +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             +    ++A+ +  +M   G   +      +I   C+Q ++ ++ +F     + G  P 
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             +YT+++ G  R      A +  + M +  C P+ +T+   I  LC++  +++A    E
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 567 SMIGKGISPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
            M   G   CEV  VT   L   +C QG   +A+ +  S+  K    T  TL+  LC+ +
Sbjct: 415 QMSEHG---CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471

Query: 624 RVGMAALFFHKLLGKD 639
           R+  AA    ++L KD
Sbjct: 472 RLDAAAELLAEMLQKD 487



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 7/313 (2%)

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           + +  A  L++R   +G  P+    T LI   C+ G    A  ++    + G   +++AY
Sbjct: 57  DDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N ++ G C+ G++  A  L+       +  D  TYT ++     +    +AL L   M+ 
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P +  YT L+ A C+     ++ +   E    G  P   TY  +I G  R+G +  
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A ++  R++  G  PD ++Y  ++ GLC   + ++  + +  M+ K   P EVT   L  
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293

Query: 586 EYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            +C+ G    A+ +LE +            N +I  +C + RV  A  F + +     + 
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353

Query: 643 DRVS-LAALKNAC 654
           D +S    LK  C
Sbjct: 354 DTISYTTVLKGLC 366



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 8/255 (3%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +PN    NA +  L  +  + EA  L+ +A  R    D    T L+    ++  T  A  
Sbjct: 42  SPN--PANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +     ++G   D+ AY TL+A +CR  ++  + +       A   P   TYT +I G  
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLC 156

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
             G +  A+     M   GC P  +TY  L+  +CK +   +A +  + M  KG +P  V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK-KLWIRTVN--TLIRKLCSEKRVGMAALFFHKL 635
           T   +    C++G    A   L  L        TV+  T+++ LC+ KR       F ++
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 636 LGKDQNVDRVSLAAL 650
           + K+   + V+   L
Sbjct: 277 MEKNCMPNEVTFDML 291



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 4/206 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++      RL     ++ EM          T N +V   C+ GL++ A E+ ++M   G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++          EA   L  ++  G   D  T + +I     +       
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           + F +++++   G +P    +  ++  LCK+  T+ A   F  +V S+   PN  TY  +
Sbjct: 583 KMFHIVQDL---GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV-SNGCMPNELTYITL 638

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLL 364
           I G   E+ +     LL  +  +G+L
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGVL 664



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 1/143 (0%)

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           RD +++ A +   R    G APD      LI  LC++ +  +A +   +    G +    
Sbjct: 56  RD-DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF 114

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              TL   YC+ G    A  ++ S+       T   +IR LC   RVG A      +L +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 639 DQNVDRVSLAALKNACYESNKYA 661
                 V+   L  A  +S  + 
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFG 197


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 199/414 (48%), Gaps = 11/414 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++  +C+ G+V +A   L  M +RG  +D    + LI   C KG    I +A E  +
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG---RIDEALEQFK 58

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR----SDNYKPNVHTYTAMISG 341
            M  +   PNV T+  +++GLCK    ++   LF  + +    S   +P+V +Y+ +I  
Sbjct: 59  SMGEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK +++++A    +RM+  G  PN  TY+SLI G CKV   + AY L+  +  E   P 
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YNA+++G  ++G+  E  ELL    ++    + I +  +L    K  E ++A   F 
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           R++K+G  P++  Y   +   C+  K+ E+ +   E + + + P   TY+S+I G+ + G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A   F RM    C P  +T+  L+ G  +  K  EA + +E M+  G  P   T  
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFF 632
            L    C      +A+ I   + +K      NT   LI+ LC  +RV  A  F 
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFL 411



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 238/511 (46%), Gaps = 40/511 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G++ + F ++ EM   G+ +     + ++   C  G ++ A E F  M    
Sbjct: 5   VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEE 63

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-----GAILDNATLTLLITAFCDKGF 273
              +  +Y  +V   C+  R+ E       M  R     G   D  + + +I A C K  
Sbjct: 64  CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC-KAQ 122

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           R  + +A+E  + M   G  PNV T++ LIDGLCK    ++A+ L ++L + ++  P   
Sbjct: 123 R--VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL-KGEDMVPRAM 179

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y A+++G+ ++ K +    LL  MKE+G   N   + ++++   K    E+A    + +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            K G  PN+  YN  + GLCK G+V EAY +L +  + ++  D ITY+ ++    K    
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  +F RM+     P    + TL+  F   KK +E+ +  ++ + AG  P  +TY  +
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 514 ---ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
              +CG     ++ SA++ + +M +    PD  TY  LI  LC+  ++DEA +F + M  
Sbjct: 360 MDCVCGA---DSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEA 416

Query: 571 KGISP------------CEVTRVTLA-------YEYCKQGDSATAMIILESLDKKLWIR- 610
             + P            C+   V  A        E CK G+   A+ ++E +  K  +R 
Sbjct: 417 DNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLK-GVRP 475

Query: 611 ---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              T   ++R LC   RV  A   F K+  +
Sbjct: 476 DEATYVAVLRSLCGLDRVDSAIAEFEKMASR 506



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 219/486 (45%), Gaps = 65/486 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-----TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +V+   +  R+ EG  +  +M      ++G      + + V+   C+   V+ A E F  
Sbjct: 74  VVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 133

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWL-----SAMLDRGAILDNATLT------ 262
           M A G   +  +Y  ++   C++ RV EA   L       M+ R A+  NA +       
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR-AMYYNAVVNGFKRQG 192

Query: 263 ------LLITAFCDKGFRGSI----------------KQAFELLEEMVRKGWKPNVYTHT 300
                  L+    +KGF  +I                ++A +  E +++ G KPNV T+ 
Sbjct: 193 KPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 252

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           V + GLCK G  ++A+R+ L++V S    P+V TY+++I G+CK  +M++A+ +  RM  
Sbjct: 253 VAVHGLCKAGKVDEAYRILLEMVES-KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 311

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
              +P+  T+ +L++G  +      A+ + + M   G  P +  YN ++D +C    V+ 
Sbjct: 312 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 371

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A E+  K  +++ Q D  TY  L+    +     +A      M    + P+      L+ 
Sbjct: 372 ALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 431

Query: 481 AFCRQKKMKES-------------------EKFFQEAITAGLFPTKETYTSMI---CGYL 518
             C+Q ++ E+                    +  ++ +  G+ P + TY +++   CG  
Sbjct: 432 VLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLD 491

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R   + SA+  F++M   GCAP  +TY  LI   C     D+A + +E+M+  G +P   
Sbjct: 492 R---VDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQ 548

Query: 579 TRVTLA 584
           T  TL+
Sbjct: 549 TMRTLS 554


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/548 (24%), Positives = 242/548 (44%), Gaps = 33/548 (6%)

Query: 94  SLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAH 153
           S + +  I+V+ S      S  AL  FY    F + +  +++Y     +L+    F+  +
Sbjct: 108 SCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHILDALLDENRFQMIN 166

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            +                       M  +G+     T N ++   C+   V+ A ++  E
Sbjct: 167 PIYS--------------------NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVE 206

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M ++G   D  SY  ++ + C++G+V EA R L+        + NA    LI   C +  
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEA-RELAMSFTPSVPVYNA----LINGVCKEY- 260

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             + ++AF+LL+EM+ KG  PNV ++T +I+ L   G  E +  +  K+  +    PN+H
Sbjct: 261 --TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF-ARGCSPNLH 317

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+T++I G+  +   + A    +RM  +G++PN   Y +L++G C   +   A  + + M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              GC PN+  Y+A+IDG  K G +  A E+           + + YT ++    + +  
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            QA  L   M      P+   + T I   C   ++  + K F +   +G FP   TY  +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +   L+D     A    + M   G   + +TY  +I G C    L EA +    M+ +G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAAL 630
            P  +T   +   YCKQG    A+ +++ L    W   I    +LI  +C+   V  A +
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 631 FFHKLLGK 638
           +  ++L +
Sbjct: 618 YLRRMLSE 625



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 199/417 (47%), Gaps = 9/417 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++SS  ++G++KE   + +  T + +P+  + +N V    C+    E A ++ DEM  +G
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPS-VPVYNALINGV----CKEYTFEEAFQLLDEMMNKG 276

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  SY  ++ A    G V  +   L+ M  RG   +  T T LI  F     +G   
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF---LKGGSH 333

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +  + M+R+G  PNV  +  L+ GLC K     A  +F ++   +   PNV TY+A+
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSAL 392

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GY K   ++ A  +   M   G  PN   YT ++   C+   F +AY L++ M  E C
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +N  I GLC  GRV  A ++  +        +  TY  LL   LK     +A G
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G+  ++  Y T+I  +C    + E+ +   + +  G  P   T   +I  Y 
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYC 572

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           + G ++ A++   R++     PD I Y +LISG+C    ++EA  +   M+ +GISP
Sbjct: 573 KQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 8/324 (2%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A   F  +  S ++K    TY  MI     E +M+  + LL++MK +G+  + + + S+I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
             + + G+ E+A      M      P +  YN I+D L  + R Q    +     +  ++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY ILL    K      A  L   M   G +PD  +YTTLI++ C+  K+KE+ + 
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE- 237

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
               +     P+   Y ++I G  ++     A +    M   G  P+ I+Y  +I+ L  
Sbjct: 238 ----LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV-- 612
              ++ +      M  +G SP   T  +L   +  +G S  A+   + + ++  +  V  
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353

Query: 613 -NTLIRKLCSEKRVGMAALFFHKL 635
            N L+  LCS++ +G A   F+++
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQM 377


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 216/458 (47%), Gaps = 8/458 (1%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           LP +    NR+ G+       +    +  +M  +G+  D  +  +M+  +CR  ++  A 
Sbjct: 87  LPTVID-FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAF 145

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             +  +   G   +  T   L+   C     G + +A EL++ MV     P++ T   ++
Sbjct: 146 SAMGKIFKLGYEPNTVTFNTLLNGLC---LEGRVFEAVELVDCMVLSQHVPDLITLNTIV 202

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           +GLC K    +A  L  +++ ++  +PN  TY  +++  CK      A  LL +M+ + +
Sbjct: 203 NGLCLKDRVSEAVDLIARMM-ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKI 261

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TYT +I   CK G  + A      M  +G   N++ YN++I   C  GR  +  +
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQ 321

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           LL+    R++  + +T++ L+   +K+ +  +A  L+  M+  G+ P+   Y +LI   C
Sbjct: 322 LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC 381

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
             K++ E+ +     ++ G  P   TY  +I G+ +   +   ++ F++M+  G   D +
Sbjct: 382 NDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  LI G C+  KL  A + ++ M+ +G+ P  +T   L    C  G+   A+ IL+ +
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501

Query: 604 DK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            K   +L I   N +I  +C+  +V  A   F  L  K
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK 539



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 211/484 (43%), Gaps = 37/484 (7%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  M++ F    +L   FS + ++   G    T T N ++   C  G V  A E+ D M 
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
                 D  +   +V   C   RV+EA   ++ M+  G   +  T   ++   C  G   
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF---------------- 319
           S   A +LL +M  +  KP+V T+T++ID LCK G  + A   F                
Sbjct: 248 S---ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYN 304

Query: 320 ------------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
                             L+ + +    PNV T++A+I    KE K+  A+ L   M  +
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G+ PNT TY SLIYG C     + A  +MDLM  +GC P+I+ YN +I+G CK  +V + 
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L +K   R + AD +TY+ L+    +  +   A  +F  MV  G++P I  Y  L+  
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C   +++E+     +     +      Y  +I G      +  A   F  +   G   D
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
             +Y  ++SGLCK+S L EA   +  M   G  P   T  TL   + +  D  T++ ++E
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604

Query: 602 SLDK 605
            + +
Sbjct: 605 EMKR 608



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 190/368 (51%), Gaps = 5/368 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++   C+ G ++ A   F EM  +G+ A+  +Y  ++ ++C  GR  +  + L  M+ R 
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              +  T + LI +   +G    + +A +L  EM+ +G +PN  T+  LI GLC     +
Sbjct: 331 ITPNVVTFSALIDSLVKEG---KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A ++ + L+ S    P++ TY  +I+G+CK ++++    L  +M  +G++ +T TY++L
Sbjct: 388 EANQM-MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G C+      A  +   M  +G  P I  Y  ++DGLC  G ++EA  +L +  + ++
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKM 506

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D   Y I++       +   A  LFC +   G+  DI +Y  +++  C++  + E++ 
Sbjct: 507 ELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADA 566

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F++    G  P   TY ++I  +LR  +I+++V+  + M + G + D  T   ++  + 
Sbjct: 567 LFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTV-KIVMDML 625

Query: 554 KQSKLDEA 561
              +LD++
Sbjct: 626 SSGELDKS 633



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 195/425 (45%), Gaps = 5/425 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ E   ++  M  NG      T   ++   C+ G    A ++  +M  R +     +Y 
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++   C+ GR+ +A  + S M  +G   +  T   LI +FC     G      +LL +M
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS---FGRWDDGAQLLRDM 326

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           + +   PNV T + LID L K+G   +A  L+ +++ +   +PN  TY ++I G C +++
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI-TRGIEPNTITYNSLIYGLCNDKR 385

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  +++ M  +G  P+  TY  LI G CK    +    L   M   G   +   Y+ 
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I G C+  ++  A ++ ++   + +    +TY ILL       E ++ALG+  +M K  
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +  DI  Y  +I   C   K+ ++   F    + G+    ++Y  M+ G  +  ++S A 
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F++M + G  PD  TY  LI    + + +  + Q  E M   G S  + + V +  + 
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSS-DASTVKIVMDM 624

Query: 588 CKQGD 592
              G+
Sbjct: 625 LSSGE 629



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 185/449 (41%), Gaps = 60/449 (13%)

Query: 268 FCDKGFRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           FC +GF G +  +     +E +R G          L+D   KK   + A  LF  ++RS 
Sbjct: 41  FCVQGFSGLTSDRKMSSYKERLRSG----------LVD--IKK---DDAVALFQSMLRSR 85

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P V  +  +     + ++ +    L ++M+ +G+  +  T   +I   C+      A
Sbjct: 86  PL-PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFA 144

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKG------------------------------ 416
           +  M  + K G  PN   +N +++GLC +G                              
Sbjct: 145 FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNG 204

Query: 417 -----RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
                RV EA +L+ +      Q ++ TY  +L+   K   T  AL L  +M    + P 
Sbjct: 205 LCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPH 264

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  YT +I   C+  ++ ++  FF E  T G+     TY S+I  +   G      +  +
Sbjct: 265 VVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--K 589
            M      P+ +T+ ALI  L K+ KL EA   Y  MI +GI P  +T  +L Y  C  K
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384

Query: 590 QGDSATAMIIL---ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           + D A  M+ L   +  D  +W  T N LI   C  K+V      F K+  +    D V+
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIW--TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVT 442

Query: 647 LAALKNACYESNKYALFSDLSQR-IAEGI 674
            + L     +S K  +   + Q  +++G+
Sbjct: 443 YSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 193/402 (48%), Gaps = 6/402 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           ++NR++        V+ AE  F     R V  D  ++ +++   C+ G++ +A      +
Sbjct: 152 SVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDI 211

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G      T   +I  +C +G  G +     LL+EMV  G  PN  T  VL++G CK 
Sbjct: 212 RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKD 271

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
             T  A R+F ++ +      +V TY+A++ G C E K+     L++ MK+ GL+PN  T
Sbjct: 272 SNTAAAVRVFEEM-KQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLAT 330

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             S++ G CK G    A   +D M ++   PN+  Y  ++DG  +  ++++A  + +   
Sbjct: 331 LNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMS 390

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + ++ +   Y  L++   +  + +   GL   M   G+  DI  Y  LI A C + +++
Sbjct: 391 GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVR 450

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           ++ K   E +  GL P   TY ++I GY   GNI SA +   RM +     + +TY   I
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFI 510

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
             LC+  K++E  +    M+ KG+ P  VT     Y+  K+G
Sbjct: 511 KCLCRMGKMEETNELLNEMLEKGLVPNGVT-----YDTIKEG 547



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 7/375 (1%)

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +R+   P+++T  ++I GLCK G   KA  +  K +R+    P+V TY  +I GYCK  +
Sbjct: 177 LRRRVSPDLFTFNIVISGLCKTGQLRKAGDVA-KDIRAWGLAPSVVTYNTIIDGYCKRGR 235

Query: 348 MNR---AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             R    + LL+ M E G+ PN  T+  L+ G+CK  N   A  + + M ++G   ++  
Sbjct: 236 AGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVT 295

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y+A++ GLC +G+V+E  +L+ +     L  +  T   +L+   K+     A G    M 
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSME 355

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +  + P++  YT L+  + R  KMK++    +     G+ P    Y  +I G+ R+G+  
Sbjct: 356 QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           S       M   G   D +TY  LI  LC + ++ +A +  + M+  G+ P  +T  T+ 
Sbjct: 416 SVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTII 475

Query: 585 YEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
             YC++G+  +A  I   +E   K+  + T N  I+ LC   ++       +++L K   
Sbjct: 476 NGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLV 535

Query: 642 VDRVSLAALKNACYE 656
            + V+   +K    E
Sbjct: 536 PNGVTYDTIKEGMME 550



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 7/366 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE---LGLVEYAEEVFDEMC 215
           ++S   + G+L++   +  ++   GL     T N ++   C+    G + + + +  EM 
Sbjct: 191 VISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
             G+  +  ++ ++V  YC+      A R    M  +G      T + L+   C +G   
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEG--- 307

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +++  +L++EM   G  PN+ T   +++G CKKG    A   ++  +   N KPNV TY
Sbjct: 308 KVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDA-EGWIDSMEQKNVKPNVVTY 366

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           T ++ GY + +KM  A  + E M  +G+ PN   Y  LI G  + G++     L+D M  
Sbjct: 367 TILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRM 426

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G   +I  YN +I  LC KG V++A +LL +     L+   +TY  +++ + ++   K 
Sbjct: 427 KGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKS 486

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A  +  RM K     ++  Y   I   CR  KM+E+ +   E +  GL P   TY ++  
Sbjct: 487 AYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKE 546

Query: 516 GYLRDG 521
           G +  G
Sbjct: 547 GMMEKG 552



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 6/315 (1%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           ++P+  +   ++S     E+++ AE   +    + + P+  T+  +I G CK G   +A 
Sbjct: 146 HRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAG 205

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE---LLKKAFQRELQADKITYTILL 444
           D+   +   G  P++  YN IIDG CK+GR    Y    LLK+  +  +  +++T+ +L+
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLV 265

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           + + K + T  A+ +F  M + G+   +  Y+ L+   C + K++E  K   E    GL 
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T  S++ G+ + G ++ A  +   M Q    P+ +TY  L+ G  +  K+ +A   
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCS 621
            E+M GKG+ P       L   + + GD  +   +L+ +  K     I T N LI  LC 
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCV 445

Query: 622 EKRVGMAALFFHKLL 636
           +  V  A     ++L
Sbjct: 446 KGEVRKAVKLLDEML 460



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 37/329 (11%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+    +++ EM   G+     T N +V   C+      A  VF+EM  +G+ A   +Y
Sbjct: 237 GRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTY 296

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V   C  G+V E  + +  M D G + + ATL  ++  FC KG    +  A   ++ 
Sbjct: 297 SALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGM---MTDAEGWIDS 353

Query: 287 MVRKGWKPNVYTHTVLIDG-----------LCKKGWTEKAFRL----------------- 318
           M +K  KPNV T+T+L+DG             K+  + K  R                  
Sbjct: 354 MEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGD 413

Query: 319 ------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
                  L  +R    + ++ TY  +I   C + ++ +A  LL+ M   GL P   TY +
Sbjct: 414 WRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNT 473

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G+C+ GN + AY++   M K     N+  YN  I  LC+ G+++E  ELL +  ++ 
Sbjct: 474 IINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKG 533

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFC 461
           L  + +TY  +    +++  T    G  C
Sbjct: 534 LVPNGVTYDTIKEGMMEKGYTPDVRGFTC 562



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 3/158 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +  C+++ F   G  +    ++ EM   G+     T N ++G  C  G V  A ++ DEM
Sbjct: 400 IYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM 459

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+     +Y  ++  YC  G +  A    + M       +  T  + I   C     
Sbjct: 460 LMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRM--- 516

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G +++  ELL EM+ KG  PN  T+  + +G+ +KG+T
Sbjct: 517 GKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYT 554



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 58/122 (47%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
             ++ +    G +++   ++ EM   GL  +  T N ++   CE G ++ A E+   M  
Sbjct: 437 NVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
               A+  +Y + +   CRMG++ E +  L+ ML++G + +  T   +     +KG+   
Sbjct: 497 GKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556

Query: 277 IK 278
           ++
Sbjct: 557 VR 558


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 221/493 (44%), Gaps = 73/493 (14%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           ++E FS+  ++ + G+       N ++   C+    + A+ +F EM  RG+  +  +Y +
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++ A C+ G + +A      M D+G  +       LI  +C +G   S+ +A  LL  MV
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG---SLDRARGLLSGMV 435

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           ++G  P   +++ LI GLC+ G       L  ++        N +T+TA+I+G+CK++KM
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER-GIAWNNYTFTALINGFCKDKKM 494

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           + A  L ++M +  ++PN  T+  +I G+C VGN  +A+ L D M + G  P+ Y Y ++
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 409 IDGLC-----------------------------------KKGRVQEAYELLKKAFQREL 433
           I GLC                                   ++GR  E Y L  +   R +
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D +++TI++   LKQ + +++  LF  M + G+ PD   YT +I A  +++ M ++  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA------ 547
            + + +  G  P   T+T +I    + G + SA    + M      P+  TY        
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 548 ----------------------------LISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
                                       LI GLCK  K+ EA      +   G SP  ++
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 794

Query: 580 RVTLAYEYCKQGD 592
             T+ +E CK GD
Sbjct: 795 YSTIIHELCKMGD 807



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 186/393 (47%), Gaps = 39/393 (9%)

Query: 207 AEEVFDEMC-----------------------------------ARGVCADASSYKLMVV 231
           A ++FD+M                                    + GV A A  Y +++ 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C+  RV EA    + M++ G   D  T   L+  FC       ++ A  +  +M+R G
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDMIRLG 298

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           + P+    + +ID L KK   E+AF L  KL       PNV  Y A+I   CK E+ + A
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKL-GDLGMVPNVFAYNALIDKLCKNERFDDA 357

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + L + M  +GL PN  TY  LI+  CK G  E A  L D M  +G    +Y YN++I+G
Sbjct: 358 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK+G +  A  LL    +  L     +Y+ L++   +  +    + L   M + G+  +
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
            + +T LI  FC+ KKM E+ + F + I + + P + T+  MI GY   GNI  A + + 
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           +M ++G  PDN TY +LISGLC  S + +A +F
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 213/447 (47%), Gaps = 4/447 (0%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ E   L     +V+ M + G+       N ++   C+   V+ A EV + M   GV
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
            AD  +Y+ +V  +CRM  +  A R    M+  G +   A  + +I     K     +++
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL---VEE 321

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF L  ++   G  PNV+ +  LID LCK    + A RLF K +     +PN  TY  +I
Sbjct: 322 AFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF-KEMAGRGLEPNEVTYAILI 380

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK   +  A  L ++M+++G+      Y SLI G+CK G+ +RA  L+  M KEG T
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P   +Y+ +I GLC+ G +    EL ++  +R +  +  T+T L++   K  +  +A  L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M+ + + P+   +  +I  +C    ++++ + + + +  GL P   TY S+I G   
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A ++   +       +N +  AL+ G  ++ +  E    ++ M  +G+    V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
              + Y   KQ D   + ++   + ++
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 11/461 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G+  +  +   ++ +  ++ +   A      ML  G  LD    T  I A+C+     
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR--- 212

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A  L+  M  +G K +   + VL+ GLCK    ++A  +   +V        V TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TY 271

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+C+ E++  A  +   M   G +P+    + +I    K    E A+ L   +G 
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN++AYNA+ID LCK  R  +A  L K+   R L+ +++TY IL+    K+   + 
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF +M   G+   ++ Y +LI  +C+Q  +  +       +  GL PT  +Y+ +I 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R+G++SS ++  + M + G A +N T+ ALI+G CK  K+DEA + ++ MI   + P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
            EVT   +   YC  G+   A  + + + +   K    T  +LI  LC    V  A  F 
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
             L      ++  SL AL    +   +    Y L+ +++ R
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 239/585 (40%), Gaps = 87/585 (14%)

Query: 68  MVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGS--MVALSFFYWAI- 124
           M L   +    L   P   N    ID L  ++ +    SLA + G   MV   F Y A+ 
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 125 ----GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
                  +F    RL+       ++    E        ++ +  + G +++   +  +M 
Sbjct: 346 DKLCKNERFDDADRLF-----KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G+ +     N ++   C+ G ++ A  +   M   G+   A+SY  ++   CR G ++
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
                   M +RG   +N T T LI  FC DK     + +A  L ++M+     PN  T 
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDK----KMDEAARLFDKMIDSNVIPNEVTF 516

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            V+I+G C  G   KAF+L+ ++V     KP+ +TY ++ISG C    +++A   +  ++
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               + N  + T+L+YG  + G F   Y L D M   G   ++ ++  I+    K+   +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           ++  L ++  ++ ++ D I YT ++    K+    QAL  + +MV  G +P+   +T LI
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETY--------------------TSMICGYL- 518
              C+   +  +E   +E +   + P K TY                    ++M+ G+L 
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 519 -------------RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL------- 558
                        + G I  A+    ++ + G +PD I+Y  +I  LCK   +       
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 559 ----------------------------DEACQFYESMIGKGISP 575
                                       D+A   Y +MI  G+ P
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQP 860



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 198/405 (48%), Gaps = 7/405 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  ++ E   +  +M ++ +     T N ++   C +G +  A +++D+M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y+ ++   C    V++A+ +++ + +  A+L+N +LT L+  F    FR G  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF----FREGRF 599

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + + L +EM  +G K ++ + T+++    K+   EK+  LF ++ +    KP+   YT 
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGVKPDDIFYTC 658

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI    KEE M +A    ++M   G  PNT T+T LI   CK G    A  L   M    
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN + YN  +D    +G +++A +L     Q  L A  +++ IL+    K  + ++A+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAI 777

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  ++ ++G +PD  +Y+T+I   C+   + ++ + + E +  GL P    Y   I   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
              G    A+  +  M + G  P+  TY AL+SG+      D +C
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 40/361 (11%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L L  S     N +T + ++    K  +   A  L ++M + G+  +   YT+ I  +C+
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             N + A  L+  M  EG   +   YN ++ GLCK  RVQEA E+        + AD++T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 440 Y-----------------------------------TILLSEHLKQAETKQALGLFCRMV 464
           Y                                   + ++ E  K+   ++A  L C++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+ P++ AY  LI   C+ ++  ++++ F+E    GL P + TY  +I    + G I 
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+  F +M   G       Y +LI+G CKQ  LD A      M+ +G++P   +   L 
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 585 YEYCKQGDSATAMIILESLDKK--LWIR-TVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C+ GD ++ M +   + ++   W   T   LI   C +K++  AA  F K++  D N
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI--DSN 508

Query: 642 V 642
           V
Sbjct: 509 V 509



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 38/228 (16%)

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           + +G+  + +  + ++ +  + ++   +   F + + +G+   +  YT+ I  Y    N+
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A     RM   G     + Y  L+ GLCK  ++ EA +    M+  G++  EVT  TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 584 AYEYCKQGDSATAMII-------------------LESLDKKLWIRTV------------ 612
            Y +C+  +   A+ I                   ++ L KK  +               
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 613 -------NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                  N LI KLC  +R   A   F ++ G+    + V+ A L +A
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 200/401 (49%), Gaps = 17/401 (4%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +FDEM  RG+  +   Y +++   C+  ++ +A R  S M   G   D  T  +L+  FC
Sbjct: 220 LFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFC 279

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G+   +  AF LL+ + + G    V  +  LI+GL +    E+A   + K++R +N K
Sbjct: 280 KSGY---LDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR-ENIK 335

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  YT MI G  +E ++  A  LL  M E+GL P+T  Y +LI G C +G  + A  L
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              + K  C PN + Y+ +I G+CK G + +A  + K+  +       +T+  L++   K
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 450 QAETKQALGLFCRM-----------VKAGLNP--DIHAYTTLIAAFCRQKKMKESEKFFQ 496
               ++A  LF +M           +  G +   DI +   ++   C    + ++ K   
Sbjct: 456 ANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLM 515

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           + + +G+ P   TY  +I G+ + GNI+ A K F+ M   G  PD++TYG LI GL +  
Sbjct: 516 QLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAG 575

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           + ++A + +E M+ KG  P   T  T+    C++ + + A+
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 222/486 (45%), Gaps = 28/486 (5%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           ++G   +    E   +V  E+    +   + ++ +++ AY   G   +A      M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
              D     L++     K    +   A  +  +M++    P+V T+ +LI GLCK   T+
Sbjct: 159 CKPDLFAFNLILHFLVRKE---AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            A  LF ++       PN   Y+ ++SG C+ +K+  A+ L  +M+  G   +  TY  L
Sbjct: 216 DALVLFDEMT-DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G CK G  + A+ L+ L+ K+G    +  Y  +I+GL +  R +EA+   +K  +  +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           + D + YTI++    ++    +AL L   M + GL PD   Y  LI  FC    + E+E 
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
              E      FP   TY+ +ICG  ++G I+ A   F+ M ++GC P  +T+ +LI+GLC
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 554 KQSKLDEA-CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL--------- 603
           K ++L+EA   FY+  I +   P    R++   +  K  D A+  +++E L         
Sbjct: 455 KANRLEEARLLFYQMEIVR--KPSLFLRLSQGTD--KVFDIASLQVMMERLCESGMILKA 510

Query: 604 --------DKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                   D  +   IRT N LI   C    +  A   F ++  K    D V+   L + 
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 654 CYESNK 659
            Y + +
Sbjct: 571 LYRAGR 576



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 259/611 (42%), Gaps = 53/611 (8%)

Query: 72  SYYQQFHLRSSPPRLNLQID--IDSLT-HEQAITVVAS----------LANEAGSMVALS 118
           + +  +H R++P   ++++   I++L   E  + V++S          L  +  + +   
Sbjct: 20  TLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDTRLGFR 79

Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
            F W++     R      ++    LI    FE   +V+Q + +S  +I    E FS++IE
Sbjct: 80  LFIWSLKSWHLRCRTVQDLIIG-KLIKENAFELYWKVLQELKNSAIKIS--SEAFSVLIE 136

Query: 179 M-TNNGLP-LITSTLNRVVGIACELGLVEY---------------AEEVFDEMCARGVCA 221
             +  G+      +   +    C+  L  +               A  V+++M    +  
Sbjct: 137 AYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  +Y +++   C+  +  +A      M DRG + +    +++++  C       I  A 
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK---KIFDAQ 253

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
            L  +M   G   ++ T+ VL++G CK G+ + AF L L+L+  D +   V  Y  +I+G
Sbjct: 254 RLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL-LQLLTKDGHILGVIGYGCLING 312

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             +  +   A M  ++M  + + P+   YT +I G  + G    A  L+  M + G  P+
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
              YNA+I G C  G + EA  L  +  + +   +  TY+IL+    K     +A  +F 
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK-FFQEAIT--AGLFPTKETYTS------ 512
            M K G  P +  + +LI   C+  +++E+   F+Q  I     LF      T       
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492

Query: 513 ----MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
               M+      G I  A K   ++   G  PD  TY  LI+G CK   ++ A + ++ M
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEM 552

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRV 625
             KG  P  VT  TL     + G +  A+ I E + KK  +    T  T++   C E  +
Sbjct: 553 QLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNI 612

Query: 626 GMAALFFHKLL 636
            +A   + K L
Sbjct: 613 SLALSVWMKYL 623



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 191/468 (40%), Gaps = 65/468 (13%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL-GLV-----EYAEEVFD 212
           +++ F + G L + F+++  +T +G  L       V+G  C + GL      E A   + 
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHIL------GVIGYGCLINGLFRARRYEEAHMWYQ 327

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M    +  D   Y +M+    + GRVTEA   L  M +RG   D      LI  FCD G
Sbjct: 328 KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           +   + +A  L  E+ +    PN +T+++LI G+CK G   KA  +F K +      P+V
Sbjct: 388 Y---LDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF-KEMEKLGCLPSV 443

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMK--------------------------------- 359
            T+ ++I+G CK  ++  A +L  +M+                                 
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 360 ---------------EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
                          + G+LP+  TY  LI G CK GN   A+ L   M  +G  P+   
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +IDGL + GR ++A E+ ++  ++    +  TY  +++   ++     AL ++ + +
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           +     +      +  +F  ++      +  +  I +  F     YT  + G ++     
Sbjct: 624 RDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLA-PYTIFLIGLVQAKRDC 682

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            A   F  +        + +   LI  LC    LD A   +   + +G
Sbjct: 683 EAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 9/435 (2%)

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR 252
           RV+G A   G ++ A  +   M   G   D  +Y +++ A C  G++ +A    + M   
Sbjct: 270 RVLGRA---GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRAS 326

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
               D  T   L++ F   G  G ++       EM   G+ P+V T+T+L++ LCK G  
Sbjct: 327 SHKPDLVTYITLMSKF---GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           ++AF + L ++R     PN+HTY  +ISG     +++ A  L   M+  G+ P   +Y  
Sbjct: 384 DQAFDM-LDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
            I  + K+G+ E+A D  + M K G  P+I A NA +  L + GR++EA ++        
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L  D +TY +++  + K  +  +A  L   M+  G  PDI    +LI    +  ++ E+ 
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F       L PT  TY  +I G  ++G +  A+  F  M + GC P+ +T+ AL+  L
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
           CK   +D A + +  M     SP  +T  T+ Y   K+G +  A      + K L     
Sbjct: 623 CKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHV 682

Query: 611 TVNTLIRKLCSEKRV 625
           T+ TL+  +  + RV
Sbjct: 683 TLYTLLPGVVKDGRV 697



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 207/453 (45%), Gaps = 5/453 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+ + + ++  M + G      T   ++   C  G ++ A+E++ +M A     D  +Y
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++  +   G +    R+ S M   G   D  T T+L+ A C     G + QAF++L+ 
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKS---GKVDQAFDMLDV 392

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G  PN++T+  LI GL      ++A  LF  +  S    P  ++Y   I  Y K  
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM-ESLGVAPTAYSYVLFIDYYGKLG 451

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
              +A    E+MK++G++P+     + +Y   ++G    A D+ + +   G +P+   YN
Sbjct: 452 DPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYN 511

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++    K G++ +A +LL +      + D I    L+    K     +A  +F R+   
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            L P +  Y  LI    ++ K+ ++   F     +G  P   T+ +++    ++  +  A
Sbjct: 572 KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLA 631

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
           +K F RM  + C+PD +TY  +I GL K+ +   A  FY  M  K +SP  VT  TL   
Sbjct: 632 LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPG 690

Query: 587 YCKQGDSATAMIILESLDKKLWIRTVNTLIRKL 619
             K G    A+ I+     +  ++T N +  +L
Sbjct: 691 VVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGEL 723



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 9/396 (2%)

Query: 154  EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
            E+M+C++   AEI   +E  S    +  N +    + +  ++ + C+      A+++FD+
Sbjct: 722  ELMECILIE-AEI---EEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777

Query: 214  MC-ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
               + G      SY  ++           A +    M + G   +  T  LL+ A    G
Sbjct: 778  FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDA---HG 834

Query: 273  FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                I + FEL  EM+ +G KPN+ TH ++I  L K     KA  L+ +++  D + P  
Sbjct: 835  KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGD-FSPTP 893

Query: 333  HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             TY  +I G  K  +   A  + E M +    PN   Y  LI G  K GN   A DL   
Sbjct: 894  CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKR 953

Query: 393  MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
            M KEG  P++ +Y  +++ L   GRV +A    ++     L  D ++Y ++++   K   
Sbjct: 954  MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013

Query: 453  TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             ++AL LF  M   G++P+++ Y  LI  F     + ++ K F+E    GL P   TY +
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073

Query: 513  MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            +I G+ + GN   A   F++M  +GC+P+  T+  L
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 5/324 (1%)

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           +T F     +G I+QA   L +M + G+  N Y++  LI  L + G+ ++A +++ +++ 
Sbjct: 161 LTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMI- 219

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S+  KP++ TY+A++    +         LLE M+  GL PN  TYT  I    + G  +
Sbjct: 220 SEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRID 279

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            AY ++  M  EGC P++  Y  +ID LC  G++ +A EL  K      + D +TY  L+
Sbjct: 280 DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           S+     + +     +  M   G  PD+  YT L+ A C+  K+ ++          G+ 
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   TY ++I G L    +  A++ F  M  +G AP   +Y   I    K    ++A   
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459

Query: 565 YESMIGKGISP----CEVTRVTLA 584
           +E M  +GI P    C  +  +LA
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLA 483



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 206/532 (38%), Gaps = 37/532 (6%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++   + G+L +   +   M  +G P  T T N ++   C+   V+ A ++F  M    
Sbjct: 583  LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
               D  +Y  ++    + GR   A  W    + +    D+ TL  L+      G      
Sbjct: 643  CSPDVLTYNTIIYGLIKEGRAGYA-FWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 273  ---------------------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                                           I++A    E +V      +      LI  
Sbjct: 702  KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761

Query: 306  LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            LCK+     A +LF K  +S    P   +Y  ++ G         A  L   MK  G  P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 366  NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
            N  TY  L+  H K    +  ++L + M   GC PNI  +N II  L K   + +A +L 
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881

Query: 426  KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
             +    +      TY  L+   LK   +++A+ +F  M      P+   Y  LI  F + 
Sbjct: 882  YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941

Query: 486  KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
              +  +   F+  I  G+ P  ++YT ++      G +  AV YF+ +   G  PD ++Y
Sbjct: 942  GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001

Query: 546  GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMI-ILES 602
              +I+GL K  +L+EA   +  M  +GISP   T   L   +   G  D A  M   L+ 
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQF 1061

Query: 603  LDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            +  +  + T N LIR          A   F K++    + +  + A L N C
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 200/450 (44%), Gaps = 41/450 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V +  + G++ + F M+  M   G+     T N ++     L  ++ A E+F+ M + G
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V   A SY L +  Y ++G   +A      M  RG +   A     + +  +    G I+
Sbjct: 433 VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE---MGRIR 489

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++  ++   G  P+  T+ +++    K G  +KA +L  +++ S+  +P++    ++
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML-SEGCEPDIIVVNSL 548

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I    K  +++ A  +  R+K+  L P   TY  LI G  K G   +A DL   M + GC
Sbjct: 549 IDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGC 608

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   +NA++D LCK     +A +L                               AL 
Sbjct: 609 PPNTVTFNALLDCLCK----NDAVDL-------------------------------ALK 633

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +FCRM     +PD+  Y T+I    ++ +   +  F+ + +   L P   T  +++ G +
Sbjct: 634 MFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVV 692

Query: 519 RDGNISSAVK-YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
           +DG +  A+K   + ++Q G    N  +G L+  +  +++++EA  F E ++   I   +
Sbjct: 693 KDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDD 752

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKL 607
              + L    CKQ  +  A  + +   K L
Sbjct: 753 NLILPLIRVLCKQKKALDAKKLFDKFTKSL 782



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 14/332 (4%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F+L+++ V     PN  T+  +   L  KG   +A    L  +R   +  N ++Y  +I
Sbjct: 144 VFDLMQKQVIN-RNPN--TYLTIFKALSIKGGIRQA-PFALGKMRQAGFVLNAYSYNGLI 199

Query: 340 -----SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
                 G+CKE     A  + +RM  +GL P+  TY++L+    +  +     DL++ M 
Sbjct: 200 YFLLQPGFCKE-----ALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME 254

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
             G  PNIY Y   I  L + GR+ +AY +LK         D +TYT+L+       +  
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L+ +M  +   PD+  Y TL++ F     ++  ++F+ E    G  P   TYT ++
Sbjct: 315 KAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILV 374

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               + G +  A      M   G  P+  TY  LISGL    +LDEA + + +M   G++
Sbjct: 375 EALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA 434

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           P   + V     Y K GD   A+   E + K+
Sbjct: 435 PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKR 466



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 107/251 (42%), Gaps = 3/251 (1%)

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  E    + DLM K+    N   Y  I   L  KG +++A   L K  Q     +  +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L+   L+    K+AL ++ RM+  GL P +  Y+ L+ A  R++         +E  T
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            GL P   TYT  I    R G I  A    + M   GC PD +TY  LI  LC   KLD+
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIR 617
           A + Y  M      P  VT +TL  ++   GD  T       ++   +   + T   L+ 
Sbjct: 316 AKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVE 375

Query: 618 KLCSEKRVGMA 628
            LC   +V  A
Sbjct: 376 ALCKSGKVDQA 386



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 3/285 (1%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           + + M++Q +  N NTY ++       G   +A   +  M + G   N Y+YN +I  L 
Sbjct: 144 VFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           + G  +EA ++ K+     L+    TY+ L+    ++ +T   + L   M   GL P+I+
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            YT  I    R  ++ ++    +     G  P   TYT +I      G +  A + + +M
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
                 PD +TY  L+S       L+   +F+  M   G +P  VT   L    CK G  
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 594 ATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKL 635
             A  +L+ +  +  +    T NTLI  L + +R+  A   F+ +
Sbjct: 384 DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM 428


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 222/486 (45%), Gaps = 8/486 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM+  +A +GRLKE   M  +M + GL       N  +   C+ G  + A E+FD M A
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G   D  SY  ++  Y   G   +     ++M   G   D     +LI A+     RG 
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK---RGM 455

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +  EM ++G  P+V T++ +I    + G    A   F ++V +   +PN   Y 
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV-ARGIQPNTAVYH 514

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           ++I G+C    + +A+ L+  M  +G+  P+   + S+I   CK G    A+D+ DL+  
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  + ++IDG C  G++ +A+++L       ++ D +TY+ LL  + K      
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
            L LF  M + G+ P+   Y  ++A   R  +   + K F E I +G   T   Y  ++ 
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R+     A+  FQ++  +           +I+ + K  + +EA + + ++   G+ P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFF 632
            E T   +     K G    A  +  S++K   +   R +N +IR L  +  +  A  + 
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814

Query: 633 HKLLGK 638
            K+ GK
Sbjct: 815 SKVDGK 820



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 218/470 (46%), Gaps = 8/470 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G   +  S+  EMT  G+     T N ++   C+   ++ AE V  +M   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  M+  Y  +GR+ EA +    M  RG I +       + + C     G  K
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK---HGRSK 387

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A E+ + M  KG KP++ ++  L+ G   +GW      LF  + +S+    +   +  +
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM-KSNGIAADCRVFNIL 446

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  Y K   ++ A ++   M++QG+ P+  TY+++I    ++G    A +  + M   G 
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGI 506

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL-QADKITYTILLSEHLKQAETKQAL 457
            PN   Y++II G C  G + +A EL+ +   + + + D + +  +++   K      A 
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAH 566

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  +   G  PD+  +T+LI  +C   KM ++ K        G+     TY++++ GY
Sbjct: 567 DIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGY 626

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G I+  +  F+ M + G  P+ +TYG +++GL +  +   A + +  MI  G +   
Sbjct: 627 FKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKR 624
                +    C+   +  A+I+ + L   + K  I  +NT+I  +   +R
Sbjct: 687 SIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 11/394 (2%)

Query: 234 CRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           C   R  EA +  L  M + G + +  + ++++   CD       ++A +L + M ++G 
Sbjct: 203 CYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMS---QRALDLFQMMAKEGG 259

Query: 293 --KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              PNV  +  +I G  K+G T KA  LF ++ R    KP+V TY  +I   CK   M++
Sbjct: 260 ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDK 318

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE++L +M   G  P+T TY  +I+G+  +G  + A  +   M   G  PNI   N+ + 
Sbjct: 319 AELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLA 378

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK GR +EA E+      +  + D ++Y  LL  +  +      +GLF  M   G+  
Sbjct: 379 SLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAA 438

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D   +  LI A+ ++  + ++   F E    G+ P   TY+++I  + R G ++ A++ F
Sbjct: 439 DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKF 498

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS-PCEVTRVTLAYEYCK 589
            +M   G  P+   Y ++I G C    L +A +    MI KGI  P  V   ++    CK
Sbjct: 499 NQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCK 558

Query: 590 QG---DSATAMIILESLDKKLWIRTVNTLIRKLC 620
            G   D+     ++  + ++  + T  +LI   C
Sbjct: 559 DGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYC 592



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 188/451 (41%), Gaps = 75/451 (16%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A  G   +   +   M +NG+       N ++    + G+V+ A  +F EM  +G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  ++ A+ RMGR+T+A    + M+ RG   + A    +I  FC     G + 
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFC---MHGGLV 527

Query: 279 QAFELLEEMVRKGW------------------------------------KPNVYTHTVL 302
           +A EL+ EM+ KG                                     +P+V T T L
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG C  G  +KAF++ L  +     + ++ TY+ ++ GY K  ++N    L   M+ +G
Sbjct: 588 IDGYCLVGKMDKAFKI-LDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           + PNT TY  ++ G  + G    A      M + G T  +  Y  I+ GLC+     EA 
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L +K     +   K + TIL                                 T+I A 
Sbjct: 707 ILFQKLGTMNV---KFSITIL--------------------------------NTMINAM 731

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            + ++ +E+++ F     +GL P + TY  MI   L+DG +  A   F  M + G  P +
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGS 791

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGI 573
                +I  L ++ ++ +A  +   + GK I
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 5/364 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+F+ +GRL +      +M   G+   T+  + ++   C  G +  A+E+  EM  +G
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 219 VC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           +   D   +  ++ + C+ GRV +A      + D G   D  T T LI  +C     G +
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYC---LVGKM 597

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +AF++L+ M   G + ++ T++ L+DG  K G       LF ++ R    KPN  TY  
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK-GVKPNTVTYGI 656

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           M++G  +  +   A      M E G     + Y  ++ G C+    + A  L   +G   
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              +I   N +I+ + K  R +EA EL        L  ++ TY +++   LK    + A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M K+G+ P       +I     + ++ ++  +  +     +     T + M+  +
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 518 LRDG 521
            R G
Sbjct: 837 SRKG 840


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 224/503 (44%), Gaps = 73/503 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +   ++E FS+  ++ + G+       N ++   C+    + A+ +F EM  RG
Sbjct: 332 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 391

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ A C+ G + +A      M D+G  +       LI  +C +G   S+ 
Sbjct: 392 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG---SLD 448

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL  MV++G  P   +++ LI GLC+ G       L  ++        N +T+TA+
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER-GIAWNNYTFTAL 507

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK++KM+ A  L ++M +  ++PN  T+  +I G+C VGN  +A+ L D M + G 
Sbjct: 508 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567

Query: 399 TPNIYAYNAIIDGLC-----------------------------------KKGRVQEAYE 423
            P+ Y Y ++I GLC                                   ++GR  E Y 
Sbjct: 568 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 627

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   R ++ D +++TI++   LKQ + +++  LF  M + G+ PD   YT +I A  
Sbjct: 628 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 687

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +++ M ++   + + +  G  P   T+T +I    + G + SA    + M      P+  
Sbjct: 688 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 747

Query: 544 TYGA----------------------------------LISGLCKQSKLDEACQFYESMI 569
           TY                                    LI GLCK  K+ EA      + 
Sbjct: 748 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 807

Query: 570 GKGISPCEVTRVTLAYEYCKQGD 592
             G SP  ++  T+ +E CK GD
Sbjct: 808 ESGFSPDCISYSTIIHELCKMGD 830



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 186/393 (47%), Gaps = 39/393 (9%)

Query: 207 AEEVFDEMC-----------------------------------ARGVCADASSYKLMVV 231
           A ++FD+M                                    + GV A A  Y +++ 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C+  RV EA    + M++ G   D  T   L+  FC       ++ A  +  +M+R G
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDMIRLG 321

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           + P+    + +ID L KK   E+AF L  KL       PNV  Y A+I   CK E+ + A
Sbjct: 322 FVPSEANCSFMIDELRKKELVEEAFSLACKL-GDLGMVPNVFAYNALIDKLCKNERFDDA 380

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + L + M  +GL PN  TY  LI+  CK G  E A  L D M  +G    +Y YN++I+G
Sbjct: 381 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 440

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK+G +  A  LL    +  L     +Y+ L++   +  +    + L   M + G+  +
Sbjct: 441 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 500

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
            + +T LI  FC+ KKM E+ + F + I + + P + T+  MI GY   GNI  A + + 
Sbjct: 501 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 560

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           +M ++G  PDN TY +LISGLC  S + +A +F
Sbjct: 561 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 593



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 213/447 (47%), Gaps = 4/447 (0%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ E   L     +V+ M + G+       N ++   C+   V+ A EV + M   GV
Sbjct: 228 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 287

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
            AD  +Y+ +V  +CRM  +  A R    M+  G +   A  + +I     K     +++
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL---VEE 344

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF L  ++   G  PNV+ +  LID LCK    + A RLF K +     +PN  TY  +I
Sbjct: 345 AFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF-KEMAGRGLEPNEVTYAILI 403

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK   +  A  L ++M+++G+      Y SLI G+CK G+ +RA  L+  M KEG T
Sbjct: 404 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 463

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P   +Y+ +I GLC+ G +    EL ++  +R +  +  T+T L++   K  +  +A  L
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M+ + + P+   +  +I  +C    ++++ + + + +  GL P   TY S+I G   
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A ++   +       +N +  AL+ G  ++ +  E    ++ M  +G+    V+
Sbjct: 584 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 643

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
              + Y   KQ D   + ++   + ++
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQ 670



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 11/461 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G+  +  +   ++ +  ++ +   A      ML  G  LD    T  I A+C+     
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR--- 235

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A  L+  M  +G K +   + VL+ GLCK    ++A  +   +V        V TY
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TY 294

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+C+ E++  A  +   M   G +P+    + +I    K    E A+ L   +G 
Sbjct: 295 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 354

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN++AYNA+ID LCK  R  +A  L K+   R L+ +++TY IL+    K+   + 
Sbjct: 355 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF +M   G+   ++ Y +LI  +C+Q  +  +       +  GL PT  +Y+ +I 
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 474

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R+G++SS ++  + M + G A +N T+ ALI+G CK  K+DEA + ++ MI   + P
Sbjct: 475 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
            EVT   +   YC  G+   A  + + + +   K    T  +LI  LC    V  A  F 
Sbjct: 535 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 594

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
             L      ++  SL AL    +   +    Y L+ +++ R
Sbjct: 595 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 635



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 239/585 (40%), Gaps = 87/585 (14%)

Query: 68  MVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGS--MVALSFFYWAI- 124
           M L   +    L   P   N    ID L  ++ +    SLA + G   MV   F Y A+ 
Sbjct: 309 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 368

Query: 125 ----GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
                  +F    RL+       ++    E        ++ +  + G +++   +  +M 
Sbjct: 369 DKLCKNERFDDADRLF-----KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G+ +     N ++   C+ G ++ A  +   M   G+   A+SY  ++   CR G ++
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 483

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
                   M +RG   +N T T LI  FC DK     + +A  L ++M+     PN  T 
Sbjct: 484 SCMELHREMAERGIAWNNYTFTALINGFCKDK----KMDEAARLFDKMIDSNVIPNEVTF 539

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            V+I+G C  G   KAF+L+ ++V     KP+ +TY ++ISG C    +++A   +  ++
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               + N  + T+L+YG  + G F   Y L D M   G   ++ ++  I+    K+   +
Sbjct: 599 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 658

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           ++  L ++  ++ ++ D I YT ++    K+    QAL  + +MV  G +P+   +T LI
Sbjct: 659 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 718

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETY--------------------TSMICGYL- 518
              C+   +  +E   +E +   + P K TY                    ++M+ G+L 
Sbjct: 719 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 778

Query: 519 -------------RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL------- 558
                        + G I  A+    ++ + G +PD I+Y  +I  LCK   +       
Sbjct: 779 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 838

Query: 559 ----------------------------DEACQFYESMIGKGISP 575
                                       D+A   Y +MI  G+ P
Sbjct: 839 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQP 883



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 195/395 (49%), Gaps = 7/395 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  ++ E   +  +M ++ +     T N ++   C +G +  A +++D+M   G
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y+ ++   C    V++A+ +++ + +  A+L+N +LT L+  F    FR G  
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF----FREGRF 622

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + + L +EM  +G K ++ + T+++    K+   EK+  LF ++ +    KP+   YT 
Sbjct: 623 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGVKPDDIFYTC 681

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI    KEE M +A    ++M   G  PNT T+T LI   CK G    A  L   M    
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN + YN  +D    +G +++A +L     Q  L A  +++ IL+    K  + ++A+
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAI 800

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  ++ ++G +PD  +Y+T+I   C+   + ++ + + E +  GL P    Y   I   
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              G    A+  +  M + G  P+  TY AL+SG+
Sbjct: 861 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 40/361 (11%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L L  S     N +T + ++    K  +   A  L ++M + G+  +   YT+ I  +C+
Sbjct: 174 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 233

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             N + A  L+  M  EG   +   YN ++ GLCK  RVQEA E+        + AD++T
Sbjct: 234 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 293

Query: 440 Y-----------------------------------TILLSEHLKQAETKQALGLFCRMV 464
           Y                                   + ++ E  K+   ++A  L C++ 
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 353

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+ P++ AY  LI   C+ ++  ++++ F+E    GL P + TY  +I    + G I 
Sbjct: 354 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 413

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+  F +M   G       Y +LI+G CKQ  LD A      M+ +G++P   +   L 
Sbjct: 414 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473

Query: 585 YEYCKQGDSATAMIILESLDKK--LWIR-TVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C+ GD ++ M +   + ++   W   T   LI   C +K++  AA  F K++  D N
Sbjct: 474 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI--DSN 531

Query: 642 V 642
           V
Sbjct: 532 V 532



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 138 VCATSLISNGN-----FERAHEVMQ-----CMVSSFAEIGRLKEGFSMVIEMTNNGLPLI 187
           +C TS +S  N      E ++ V+       ++  F   GR  E + +  EM   G+ L 
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
             +   +V  A +    E +  +F EM  +GV  D   Y  M+ A  +   + +A     
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 700

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+  G   +  T T+LI   C  G+ GS   A  L +EM+     PN +T+   +D   
Sbjct: 701 QMVVDGYSPNTVTHTVLINNLCKSGYLGS---AELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            +G  EKA  L   +++   +  ++ ++  +I G CK  K+  A  L+ ++ E G  P+ 
Sbjct: 758 TEGDMEKAKDLHSAMLQG--HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 815

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            +Y+++I+  CK+G+  +A++L + M  +G  P++ AYN  I      G   +A  +   
Sbjct: 816 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 875

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGL 459
             +  +Q +  TY  LLS         QAL L
Sbjct: 876 MIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 38/228 (16%)

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           + +G+  + +  + ++ +  + ++   +   F + + +G+   +  YT+ I  Y    N+
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A     RM   G     + Y  L+ GLCK  ++ EA +    M+  G++  EVT  TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 584 AYEYCKQGDSATAMII-------------------LESLDKKLWIRTV------------ 612
            Y +C+  +   A+ I                   ++ L KK  +               
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 613 -------NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                  N LI KLC  +R   A   F ++ G+    + V+ A L +A
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 405


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 224/503 (44%), Gaps = 73/503 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +   ++E FS+  ++ + G+       N ++   C+    + A+ +F EM  RG
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ A C+ G + +A      M D+G  +       LI  +C +G   S+ 
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG---SLD 425

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL  MV++G  P   +++ LI GLC+ G       L  ++        N +T+TA+
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER-GIAWNNYTFTAL 484

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK++KM+ A  L ++M +  ++PN  T+  +I G+C VGN  +A+ L D M + G 
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 399 TPNIYAYNAIIDGLC-----------------------------------KKGRVQEAYE 423
            P+ Y Y ++I GLC                                   ++GR  E Y 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  +   R ++ D +++TI++   LKQ + +++  LF  M + G+ PD   YT +I A  
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +++ M ++   + + +  G  P   T+T +I    + G + SA    + M      P+  
Sbjct: 665 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 544 TYGA----------------------------------LISGLCKQSKLDEACQFYESMI 569
           TY                                    LI GLCK  K+ EA      + 
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 784

Query: 570 GKGISPCEVTRVTLAYEYCKQGD 592
             G SP  ++  T+ +E CK GD
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGD 807



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 194/420 (46%), Gaps = 39/420 (9%)

Query: 207 AEEVFDEMC-----------------------------------ARGVCADASSYKLMVV 231
           A ++FD+M                                    + GV A A  Y +++ 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
             C+  RV EA    + M++ G   D  T   L+  FC       ++ A  +  +M+R G
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDMIRLG 298

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           + P+    + +ID L KK   E+AF L  KL       PNV  Y A+I   CK E+ + A
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKL-GDLGMVPNVFAYNALIDKLCKNERFDDA 357

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           + L + M  +GL PN  TY  LI+  CK G  E A  L D M  +G    +Y YN++I+G
Sbjct: 358 DRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
            CK+G +  A  LL    +  L     +Y+ L++   +  +    + L   M + G+  +
Sbjct: 418 YCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWN 477

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
            + +T LI  FC+ KKM E+ + F + I + + P + T+  MI GY   GNI  A + + 
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M ++G  PDN TY +LISGLC  S + +A +F   +          +   L Y + ++G
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREG 597



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 213/447 (47%), Gaps = 4/447 (0%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ E   L     +V+ M + G+       N ++   C+   V+ A EV + M   GV
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
            AD  +Y+ +V  +CRM  +  A R    M+  G +   A  + +I     K     +++
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL---VEE 321

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF L  ++   G  PNV+ +  LID LCK    + A RLF K +     +PN  TY  +I
Sbjct: 322 AFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF-KEMAGRGLEPNEVTYAILI 380

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK   +  A  L ++M+++G+      Y SLI G+CK G+ +RA  L+  M KEG T
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P   +Y+ +I GLC+ G +    EL ++  +R +  +  T+T L++   K  +  +A  L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F +M+ + + P+   +  +I  +C    ++++ + + + +  GL P   TY S+I G   
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +S A ++   +       +N +  AL+ G  ++ +  E    ++ M  +G+    V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK 606
              + Y   KQ D   + ++   + ++
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 11/461 (2%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           + G+  +  +   ++ +  ++ +   A      ML  G  LD    T  I A+C+     
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR--- 212

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A  L+  M  +G K +   + VL+ GLCK    ++A  +   +V        V TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TY 271

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+C+ E++  A  +   M   G +P+    + +I    K    E A+ L   +G 
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  PN++AYNA+ID LCK  R  +A  L K+   R L+ +++TY IL+    K+   + 
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL LF +M   G+   ++ Y +LI  +C+Q  +  +       +  GL PT  +Y+ +I 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R+G++SS ++  + M + G A +N T+ ALI+G CK  K+DEA + ++ MI   + P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
            EVT   +   YC  G+   A  + + + +   K    T  +LI  LC    V  A  F 
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 633 HKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
             L      ++  SL AL    +   +    Y L+ +++ R
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 239/585 (40%), Gaps = 87/585 (14%)

Query: 68  MVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGS--MVALSFFYWAI- 124
           M L   +    L   P   N    ID L  ++ +    SLA + G   MV   F Y A+ 
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 125 ----GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMT 180
                  +F    RL+       ++    E        ++ +  + G +++   +  +M 
Sbjct: 346 DKLCKNERFDDADRLF-----KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
           + G+ +     N ++   C+ G ++ A  +   M   G+   A+SY  ++   CR G ++
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
                   M +RG   +N T T LI  FC DK     + +A  L ++M+     PN  T 
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDK----KMDEAARLFDKMIDSNVIPNEVTF 516

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            V+I+G C  G   KAF+L+ ++V     KP+ +TY ++ISG C    +++A   +  ++
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
               + N  + T+L+YG  + G F   Y L D M   G   ++ ++  I+    K+   +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           ++  L ++  ++ ++ D I YT ++    K+    QAL  + +MV  G +P+   +T LI
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETY--------------------TSMICGYL- 518
              C+   +  +E   +E +   + P K TY                    ++M+ G+L 
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 519 -------------RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL------- 558
                        + G I  A+    ++ + G +PD I+Y  +I  LCK   +       
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 559 ----------------------------DEACQFYESMIGKGISP 575
                                       D+A   Y +MI  G+ P
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQP 860



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 198/405 (48%), Gaps = 7/405 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  ++ E   +  +M ++ +     T N ++   C +G +  A +++D+M   G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
           +  D  +Y+ ++   C    V++A+ +++ + +  A+L+N +LT L+  F    FR G  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF----FREGRF 599

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + + L +EM  +G K ++ + T+++    K+   EK+  LF ++ +    KP+   YT 
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQGVKPDDIFYTC 658

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI    KEE M +A    ++M   G  PNT T+T LI   CK G    A  L   M    
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN + YN  +D    +G +++A +L     Q  L A  +++ IL+    K  + ++A+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAI 777

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L  ++ ++G +PD  +Y+T+I   C+   + ++ + + E +  GL P    Y   I   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
              G    A+  +  M + G  P+  TY AL+SG+      D +C
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 168/394 (42%), Gaps = 39/394 (9%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L L  S     N +T + ++    K  +   A  L ++M + G+  +   YT+ I  +C+
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
             N + A  L+  M  EG   +   YN ++ GLCK  RVQEA E+        + AD++T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 440 Y-----------------------------------TILLSEHLKQAETKQALGLFCRMV 464
           Y                                   + ++ E  K+   ++A  L C++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
             G+ P++ AY  LI   C+ ++  ++++ F+E    GL P + TY  +I    + G I 
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A+  F +M   G       Y +LI+G CKQ  LD A      M+ +G++P   +   L 
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 585 YEYCKQGDSATAMIILESLDKK--LWIR-TVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
              C+ GD ++ M +   + ++   W   T   LI   C +K++  AA  F K++  +  
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 642 VDRVSL-AALKNACYESNKYALFSDLSQRIAEGI 674
            + V+    ++  C   N    F    Q +  G+
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 194/392 (49%), Gaps = 6/392 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N V+   C LGLV+ A EVF E+  R    D  +Y  ++   C+  R+ EA   L  M
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   +     +LI+A C KG  G   +A +L++ M  KG  PN  T+  L+ GLC K
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLG---RAAKLVDNMFLKGCVPNEVTYNALVHGLCLK 288

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  EKA  L  ++V S+   PN  T+  +I+G+  + + +    +L  ++ +G   N   
Sbjct: 289 GKLEKAVSLLNQMV-SNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+SLI G CK G F +A +L   M  +GC PN   Y+A+IDGLC++G++ EA   L +  
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            +    +  TY+ L+  + +  ++ +A+ ++  M       +   Y+ LI   C+  K  
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG--CAPDNITYGA 547
           E+   +++ ++ G+      Y+SMI G+     +   +K F +M   G    PD ITY  
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           L++  C Q  +  A      M+ +G  P  +T
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 190/389 (48%), Gaps = 11/389 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  L+I A C  G    + +A E+  E+  +   P+ YT++ L+ GLCK+   ++A  L 
Sbjct: 172 TFNLVIKAMCRLGL---VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL- 227

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++ +   PN+  +  +IS  CK+  + RA  L++ M  +G +PN  TY +L++G C 
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E+A  L++ M    C PN   +  +I+G   +GR  +   +L     R  + ++  
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ +  QA+ L+  MV  G  P+   Y+ LI   CR+ K+ E+  F  E  
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   TY+S++ GY   G+   A+  ++ M    C  + + Y  LI+GLCK  K  
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYC-----KQGDSATAMIILESLDKKLWIRTVNT 614
           EA   ++ M+ +GI    V   ++ + +C     +QG      ++ +    +  + T N 
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           L+   C +K +  A    + +L  DQ  D
Sbjct: 528 LLNAFCIQKSIFRAIDILNIML--DQGCD 554



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 5/363 (1%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNVHTYTAMISGYCKEEKMNR 350
           K  V +   +++ + ++G   +A   +  +V  +S N  PN  T+  +I   C+   +++
Sbjct: 129 KQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDK 188

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  +   +  +   P+  TY++L++G CK    + A  L+D M  EG  PN+ A+N +I 
Sbjct: 189 AIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLIS 248

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCKKG +  A +L+   F +    +++TY  L+     + + ++A+ L  +MV     P
Sbjct: 249 ALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVP 308

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           +   + TLI  F  Q +  +  +        G    +  Y+S+I G  ++G  + A++ +
Sbjct: 309 NDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELW 368

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           + M   GC P+ I Y ALI GLC++ KLDEA  F   M  KG  P   T  +L   Y + 
Sbjct: 369 KEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEA 428

Query: 591 GDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           GDS  A+++ + +     I      + LI  LC + +   A + + ++L +   +D V+ 
Sbjct: 429 GDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAY 488

Query: 648 AAL 650
           +++
Sbjct: 489 SSM 491



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 169/409 (41%), Gaps = 61/409 (14%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+  + G L     +V  M   G      T N +V   C  G +E A  + ++M +  
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++  ++  +   GR ++  R L ++  RG   +    + LI+  C +G      
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEG---KFN 362

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA EL +EMV KG  PN   ++ LIDGLC++G  ++A R FL  +++  Y PN  TY+++
Sbjct: 363 QAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA-RGFLSEMKNKGYLPNSFTYSSL 421

Query: 339 ISGY-----------------------------------CKEEKMNRAEMLLERMKEQGL 363
           + GY                                   CK+ K   A M+ ++M  +G+
Sbjct: 422 MRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGI 481

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAIIDGLCKKGRVQEA 421
             +   Y+S+I+G C     E+   L + M  +G    P++  YN +++  C +  +  A
Sbjct: 482 KLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRA 541

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA---YTTL 478
            ++L     +    D IT  I                 F + ++  +NP          L
Sbjct: 542 IDILNIMLDQGCDPDFITCDI-----------------FLKTLRENMNPPQDGREFLDEL 584

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +    ++++   + K  +  +   L P   T+  ++    +  N+  A+
Sbjct: 585 VVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 25/254 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++      G+L E    + EM N G    + T + ++    E G    A  V+ EM
Sbjct: 382 VYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEM 441

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                  +   Y +++   C+ G+  EA      ML RG  LD    + +I  FC+    
Sbjct: 442 ANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANL- 500

Query: 275 GSIKQAFELLEEMVRKG--WKPNVYTHTVLIDGLCKKGWTEKAFRL-------------- 318
             ++Q  +L  +M+ +G   +P+V T+ +L++  C +    +A  +              
Sbjct: 501 --VEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFI 558

Query: 319 ----FLKLVRSDNYKPN--VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
               FLK +R +   P         ++    K ++   A  ++E M  + LLP  +T+  
Sbjct: 559 TCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAM 618

Query: 373 LIYGHCKVGNFERA 386
           ++   CK  N  +A
Sbjct: 619 VVQQVCKPKNVRKA 632


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 187/362 (51%), Gaps = 4/362 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        +++ +    R+++  ++  ++   G      T   ++   C+   + +A 
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+F++M   G   +  +Y  +V   C +GR  +A   L  M+ R    +  T T LI AF
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              G    + +A EL   M++    P+V+T+  LI+GLC  G  ++A ++F  + R+  Y
Sbjct: 269 VKVG---KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN   YT +I G+CK +++     +   M ++G++ NT TYT LI G+C VG  + A +
Sbjct: 326 -PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + M      P+I  YN ++DGLC  G+V++A  + +   +RE+  + +TYTI++    
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + + A  LFC +   G+ P++  YTT+I+ FCR+  + E++  F++    G  P + 
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504

Query: 509 TY 510
            Y
Sbjct: 505 VY 506



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 220/522 (42%), Gaps = 45/522 (8%)

Query: 72  SYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRH 131
           S  + FHL S   RL +                 S    A S+    F +W   F+ +R 
Sbjct: 11  SIVKGFHLHSHRHRLQI-----------------SNPRTAASLSLCGFCFWIRAFSSYRK 53

Query: 132 FMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMV 176
            +R       + + N  F  A ++   MV S                A++ R     S+ 
Sbjct: 54  ILR-------NGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106

Query: 177 IEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            +M   G+P +  T N V+   C       A     +M   G   D  ++  ++  YC  
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
            R+ +A      +L  G   +  T T LI   C       +  A EL  +M   G +PNV
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR---HLNHAVELFNQMGTNGSRPNV 223

Query: 297 YTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            T+  L+ GLC+ G W + A+   L+ +     +PNV T+TA+I  + K  K+  A+ L 
Sbjct: 224 VTYNALVTGLCEIGRWGDAAW--LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M +  + P+  TY SLI G C  G  + A  +  LM + GC PN   Y  +I G CK 
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
            RV++  ++  +  Q+ + A+ ITYT+L+  +        A  +F +M      PDI  Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             L+   C   K++++   F+      +     TYT +I G  + G +  A   F  +  
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            G  P+ ITY  +ISG C++  + EA   ++ M   G  P E
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 4/374 (1%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
              L E+M   G  P + T  +++  +C      +A   FL  +    ++P++ T+T+++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA-SCFLGKMMKLGFEPDLVTFTSLL 160

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +GYC   ++  A  L +++   G  PN  TYT+LI   CK  +   A +L + MG  G  
Sbjct: 161 NGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  YNA++ GLC+ GR  +A  LL+   +R ++ + IT+T L+   +K  +  +A  L
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           +  M++  + PD+  Y +LI   C    + E+ + F      G +P +  YT++I G+ +
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              +   +K F  M+Q G   + ITY  LI G C   + D A + +  M  +   P   T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
              L    C  G    A++I E + K+   + I T   +I+ +C   +V  A   F  L 
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460

Query: 637 GKDQNVDRVSLAAL 650
            K    + ++   +
Sbjct: 461 SKGMKPNVITYTTM 474



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 163/347 (46%), Gaps = 4/347 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C    +E A  +FD++   G   +  +Y  ++   C+   +  A    + M   G+  + 
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   L+T  C+ G  G    A  LL +M+++  +PNV T T LID   K G   +A  L
Sbjct: 224 VTYNALVTGLCEIGRWG---DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           +  +++   Y P+V TY ++I+G C    ++ A  +   M+  G  PN   YT+LI+G C
Sbjct: 281 YNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K    E    +   M ++G   N   Y  +I G C  GR   A E+  +   R    D  
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY +LL       + ++AL +F  M K  ++ +I  YT +I   C+  K++++   F   
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            + G+ P   TYT+MI G+ R G I  A   F++M + G  P+   Y
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 4/324 (1%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  LF ++V S    P++  +T ++S   K  + +    L E+M+  G+ P   T   ++
Sbjct: 67  ALDLFTRMVHSRPL-PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           +  C      RA   +  M K G  P++  + ++++G C   R+++A  L  +      +
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            + +TYT L+    K      A+ LF +M   G  P++  Y  L+   C   +  ++   
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
            ++ +   + P   T+T++I  +++ G +  A + +  M Q+   PD  TYG+LI+GLC 
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---T 611
              LDEA Q +  M   G  P EV   TL + +CK       M I   + +K  +    T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365

Query: 612 VNTLIRKLCSEKRVGMAALFFHKL 635
              LI+  C   R  +A   F+++
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQM 389



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 82/203 (40%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           +Y  I+       +  +A +L  +          I +T LLS   K       + LF +M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              G+ P +     ++   C   +   +  F  + +  G  P   T+TS++ GY     I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A+  F ++  +G  P+ +TY  LI  LCK   L+ A + +  M   G  P  VT   L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 584 AYEYCKQGDSATAMIILESLDKK 606
               C+ G    A  +L  + K+
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKR 252



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 36/238 (15%)

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           +Y  +L   L   +   AL LF RMV +   P I  +T L++   +  +       F++ 
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P   T   ++           A  +  +M ++G  PD +T+ +L++G C  +++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
           ++A   ++ ++G G  P  VT                                  TLIR 
Sbjct: 170 EDAIALFDQILGMGFKPNVVT--------------------------------YTTLIRC 197

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQRIAE 672
           LC  + +  A   F+++       + V+  AL     E  ++     L  D+ +R  E
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 210/457 (45%), Gaps = 43/457 (9%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +SS+ + G + +      EMT +   + +   NR +G+       + AE+ +D M  +G 
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 220 CADASSYKLMVVAYC----------------RMGRVTEADRW------------------ 245
             ++ +Y   +   C                R+G V   D W                  
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYV--PDIWAYNIYLNLLCCENQLDVA 133

Query: 246 ---LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
              +  M+++G   D  T T++I   C  G       A E+   MVRKG+ P+      L
Sbjct: 134 LGVVQTMVEKGREPDIVTYTIVINGLCRAG---RFDSAVEIWRNMVRKGFSPDEKACRAL 190

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           + GLC  G  + A+ L +  +R    K +   Y ++I+G+C+   +++A+ ++  M+  G
Sbjct: 191 VLGLCHDGKVDLAYELTVGAMRG-RIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
             P+  TY  L+   C     E A +LM  M + G  P++Y+YN ++ GLCK  R+ +AY
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            ++    + +   D ++Y  ++      + TK+A  LF  M   G+ PD+  +T LI AF
Sbjct: 310 MMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAF 369

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            R+     ++K   +    GL P +  YT+++    + G +  A   F  M + G  PD 
Sbjct: 370 LREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDV 429

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           ++Y ALI+GLC+ S++ EA   YE M   G  P EVT
Sbjct: 430 VSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVT 466



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 26/389 (6%)

Query: 281 FELLEE----MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN---YKPNVH 333
           F+L E+    M+ +G+  N +T++  I GLCK     K F L  KL+   +   Y P++ 
Sbjct: 60  FDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKV----KNFVLIEKLLEDMDRLGYVPDIW 115

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y   ++  C E +++ A  +++ M E+G  P+  TYT +I G C+ G F+ A ++   M
Sbjct: 116 AYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNM 175

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G +P+  A  A++ GLC  G+V  AYEL   A +  ++  K  Y  L++   +    
Sbjct: 176 VRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWI 235

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
            +A  +   M + G  PD+  Y  L+   C +  ++E+E   ++   +G+ P   +Y  +
Sbjct: 236 DKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNEL 295

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAP--DNITYGALISGLCKQSKLDEACQFYESMIGK 571
           + G  +   +  A  Y   +N++      D ++Y  +I  LC  S    A + +E M GK
Sbjct: 296 LKGLCKANRLDKA--YMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGK 353

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL-------DKKLWIRTVNTLIRKLCSEKR 624
           GI+P  VT   L   + ++G S  A  +L+ +       D+ L+     T++  LC   +
Sbjct: 354 GITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLY----TTIVDHLCKTGK 409

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           +GMA   F  ++      D VS  AL N 
Sbjct: 410 MGMAHSVFCDMVESGITPDVVSYNALING 438



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 5/306 (1%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G  + +  +   +++ F + G + +  S++  M  NG      T N ++   C+  L+E 
Sbjct: 213 GRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEE 272

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           AE +  +M   GV  D  SY  ++   C+  R+ +A   +   ++   + D  +   +I 
Sbjct: 273 AENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIK 332

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           A C        K+A++L EEM  KG  P+V T T+LI    ++G +  A +L L  +   
Sbjct: 333 ALCTA---SHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKL-LDQMTGL 388

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+   YT ++   CK  KM  A  +   M E G+ P+  +Y +LI G C+      A
Sbjct: 389 GLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEA 448

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD-KITYTILLS 445
             L + M   G  P+   +  II GL  + ++  A  +  +  ++    D  ++ T++ +
Sbjct: 449 MHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNA 508

Query: 446 EHLKQA 451
            H   A
Sbjct: 509 IHSNDA 514



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 139/357 (38%), Gaps = 38/357 (10%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A IS Y K   +++A    + M +      +  Y   I    +   F+ A    D M 
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G + N + Y+  I GLCK        +LL+   +     D   Y I L+    + +  
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP--------- 505
            ALG+   MV+ G  PDI  YT +I   CR  +   + + ++  +  G  P         
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191

Query: 506 --------------------------TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
                                     +K  Y S+I G+ + G I  A      M + GC 
Sbjct: 192 LGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCE 251

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAM 597
           PD +TY  L++  C +  L+EA    + M   G+ P   +   L    CK    D A  M
Sbjct: 252 PDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM 311

Query: 598 IILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           ++ +   K L  + + NT+I+ LC+      A   F ++ GK    D V+   L  A
Sbjct: 312 MVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKA 368



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 12/195 (6%)

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           AY A I    K G + +A +   +  +   +   I Y   +   ++Q+    A   + RM
Sbjct: 11  AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM 70

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  G + +   Y+  I+  C+ K     EK  ++    G  P    Y   +     +  +
Sbjct: 71  IPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQL 130

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-------- 575
             A+   Q M + G  PD +TY  +I+GLC+  + D A + + +M+ KG SP        
Sbjct: 131 DVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRAL 190

Query: 576 ----CEVTRVTLAYE 586
               C   +V LAYE
Sbjct: 191 VLGLCHDGKVDLAYE 205



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 3/201 (1%)

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           R L   ++ Y   +S ++K     QAL  F  M K+        Y   I    RQ +   
Sbjct: 3   RSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDL 62

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +E+++   I  G      TY+  I G  +  N     K  + M+++G  PD   Y   ++
Sbjct: 63  AEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN 122

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI- 609
            LC +++LD A    ++M+ KG  P  VT   +    C+ G   +A+ I  ++ +K +  
Sbjct: 123 LLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSP 182

Query: 610 --RTVNTLIRKLCSEKRVGMA 628
             +    L+  LC + +V +A
Sbjct: 183 DEKACRALVLGLCHDGKVDLA 203


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 37/550 (6%)

Query: 70  LESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKF 129
           L+ + ++F ++ SP  ++  +  D +  +  I              A SFF W+    K+
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDI--------------AWSFFCWSRKQKKY 148

Query: 130 RHFMRLYIVCATSLISNGNFERAHEVM---------------QCMVSSFAEIGRLKEGFS 174
            H +  Y+     L    + +R   +                  ++ SF ++G ++E   
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLW 208

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +  +M  NG+     T N ++        V+ AE VF+ M +  +  D  +Y  M+  YC
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYC 268

Query: 235 RMGRVTEADRWLSAMLDRGAILDNAT-LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           + G+  +A   L  M  +G   D  T +T++   + D  F   +     L +EM  KG +
Sbjct: 269 KAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVA----LYQEMDEKGLQ 324

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
              +  +++I GLCK+G   + + +F  ++R  + KPNV  YT +I GY K   +  A  
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGS-KPNVAIYTVLIDGYAKTGSVEDAIR 383

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL RM ++G  P+  TY+ ++ G CK G  E A D        G   N   Y+++IDGL 
Sbjct: 384 LLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLG 443

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM-VKAGLNPDI 472
           K GRV EA  L ++  ++    D   Y  L+    K  +  +AL LF RM  + G +  +
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTV 503

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + YT LI+   ++ + +E+ K +   I  G+ PT     ++  G    G ++ A K    
Sbjct: 504 YTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDE 563

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           +  +G   D      +I+ LCK  ++ EAC+  + +  +G       R  +     K G 
Sbjct: 564 LAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK 622

Query: 593 SATAMIILES 602
           +  AM ++ S
Sbjct: 623 ADLAMKLMHS 632



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 175/376 (46%), Gaps = 40/376 (10%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI +F   G  G +++   +  +M   G +P +YT+  L++GL    + + A R+F +++
Sbjct: 193 LIKSF---GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVM 248

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S   KP+V TY  MI GYCK  +  +A   L  M+ +GL  +  TY ++I       +F
Sbjct: 249 ESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDF 308

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
                L   M ++G     +A++ +I GLCK+G++ E Y + +   ++  + +   YT+L
Sbjct: 309 SSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVL 368

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  + K    + A+ L  RM+  G NPD+  Y+ ++   C+  +++E+  +FQ     GL
Sbjct: 369 IDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGL 428

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC- 562
                 Y+S+I G  + G +  A + F+ M++ GC  D+  Y ALI    K  K+DEA  
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALA 488

Query: 563 -----------------------------------QFYESMIGKGISPCEVTRVTLAYEY 587
                                              + ++ MI KGI+P       L+   
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGL 548

Query: 588 CKQGDSATAMIILESL 603
           C  G  A A  IL+ L
Sbjct: 549 CLSGKVARACKILDEL 564



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 7/360 (1%)

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
           +K +  N+  +  L+D L      ++  R     +R   +   V    ++I  + K   +
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDR-IRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMV 203

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
                +  +MKE G+ P   TY  L+ G       + A  + ++M      P++  YN +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTM 263

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I G CK G+ Q+A E L+    + L+ADKITY  ++      ++    + L+  M + GL
Sbjct: 264 IKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGL 323

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
               HA++ +I   C++ K+ E    F+  I  G  P    YT +I GY + G++  A++
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIR 383

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
              RM   G  PD +TY  +++GLCK  +++EA  ++++    G++   +   +L     
Sbjct: 384 LLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLG 443

Query: 589 KQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVGMAALFFHKL---LGKDQNV 642
           K G    A  + E + +K   R     N LI       +V  A   F ++    G DQ V
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTV 503



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 33/322 (10%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM   GL +     + V+G  C+ G +     VF+ M  +G   + + Y +++  Y + G
Sbjct: 317 EMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTG 376

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG--------FR--------------- 274
            V +A R L  M+D G   D  T ++++   C  G        F+               
Sbjct: 377 SVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYS 436

Query: 275 ---------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
                    G + +A  L EEM  KG   + Y +  LID   K G  ++A  LF ++   
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEE 496

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
           +     V+TYT +ISG  KE +   A  L + M ++G+ P      +L  G C  G   R
Sbjct: 497 EGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVAR 556

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  ++D +   G   +  A   +I+ LCK GR++EA +L     +R  +      T++++
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615

Query: 446 EHLKQAETKQALGLFCRMVKAG 467
              K  +   A+ L    +  G
Sbjct: 616 ALRKVGKADLAMKLMHSKIGIG 637


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 196/396 (49%), Gaps = 14/396 (3%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + + +EL +EM+ +G  P+V T+  LI+    +G   KA+ ++ ++V +    PNV TYT
Sbjct: 154 LARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMV-ARRIDPNVVTYT 212

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA----YDLMDL 392
            MI   C+E+ +  AE L   MKE G+ PN  TY +L+  H K  N + A    YDL+  
Sbjct: 213 TMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL-- 270

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
             K G  PN   +  +IDGLC+  R+ EA  +     + E+      Y  L+    +   
Sbjct: 271 --KCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++AL  F  +++ GL PD    + ++   C   +M+ + +F +    +G+      Y  
Sbjct: 329 AQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I  Y + GN+  A+    RM+++G  P+ +TY +LI G  K  +++ A   Y  M+ KG
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
           + P  VT   L + + K GD   A  + + +++K       TV+ L+  LC E RV  A 
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAV 508

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSD 665
            F  +  G+ ++    S+A   +  Y +  Y L+ D
Sbjct: 509 RFIMEYSGQKKSEKNPSIA--NSVTYMTLIYGLYID 542



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 200/446 (44%), Gaps = 13/446 (2%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           + R+ E F    EM   G+     T N ++      G V  A EV+D+M AR +  +  +
Sbjct: 154 LARVWELFD---EMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVT 210

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+ A C    + +A+     M + G   +  T   L+++      R +IK A     
Sbjct: 211 YTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK---RDNIKHALVFYY 267

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           ++++ G  PN    T LIDGLC+     +A  +FL + R +   P V  Y ++I G  + 
Sbjct: 268 DLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYE-VAPTVPVYNSLIHGAFRS 326

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
                A    + +  +GL P+  T + ++ G C  G  + A   +++M + G   N  AY
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +ID  CK G + EA     +  +  ++ + +TY+ L+  H K  E + A+ ++  MV 
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P++  YT LI    +   M  +    +E    G++    T + ++ G  R+  +  
Sbjct: 447 KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQD 506

Query: 526 AVKYF------QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           AV++       ++  +     +++TY  LI GL    + +EAC F+  M   G+ P   T
Sbjct: 507 AVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFT 566

Query: 580 RVTLAYEYCKQGDSATAMIILESLDK 605
              +    C  G    AM++   + K
Sbjct: 567 YTLVIRGLCMLGYVLNAMMLYADMVK 592



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 164/353 (46%), Gaps = 7/353 (1%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           VL+  L +    ++A  +F +L       P +    A++ G  K   + R   L + M  
Sbjct: 111 VLVIALSQMALPDEALSVFGRL----RELPALPACNAILDGLVKAHMLARVWELFDEMLG 166

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G++P+  TY +LI      G+  +A+++ D M      PN+  Y  +I  LC++  + +
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGD 226

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  L  +  +  ++ +  TY  L+S H K+   K AL  +  ++K GL P+   +TTLI 
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++ E++  F +     + PT   Y S+I G  R G    A+ +FQ + + G  P
Sbjct: 287 GLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRP 346

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D  T   ++ GLC   ++  A +F E M   GI+        L  EYCK G+   A++  
Sbjct: 347 DEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTC 406

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             +  +  +  + T ++LI        + +A   + +++ K    + V+  AL
Sbjct: 407 TRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++ G ++   ++  EM   G+     T   ++    + G ++ A  +  EM  +G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR------GAILDNAT-LTLLITAFCDK 271
           + ++A +  ++V   CR  RV +A R++     +       +I ++ T +TL+   + D 
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYID- 542

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
              G   +A      M   G  P+ +T+T++I GLC  G+   A  L+  +V+
Sbjct: 543 ---GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVK 592


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 208/434 (47%), Gaps = 8/434 (1%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            R +  +  +Y +M+ + C  G +  A     ++  RG   D  T + L++ F       
Sbjct: 152 GRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN--- 208

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            +  A  LL+EM     +P+   +  L+ G  + G  EKA R++ +LVR     PN+ TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             M+ G CK      A  + ERM      P+  TY ++I+G C+  + + A  +   M K
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P++  YN+++ G C  GRV EA++         ++ +  +Y I+L          +
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 456 ALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A  L+  + K   L+PD+  ++T+I   C +    +S +  +EA T+G    + +Y+SMI
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  +DG +  AVK +++++     P++  Y ALI+G C+ SK  +A + Y  M     S
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
           P  +T  TL +  CK      A      + +K   L + T  +LIR LC +K++  A   
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 632 FHKLLGKDQNVDRV 645
           ++++L K    D V
Sbjct: 568 WNQILDKGLQTDVV 581



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 212/476 (44%), Gaps = 27/476 (5%)

Query: 138 VCATSLIS----NGNFERAHEVMQ----------------CMVSSFAEIGRLKEGFSMVI 177
           VC  +L+     NG FE+A  V +                 M+    ++G  KE   +  
Sbjct: 230 VCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWE 289

Query: 178 EMT-NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            M  NN  P + +    + G+ C    V+ A  V+ EM   G+  D   Y  ++  +C  
Sbjct: 290 RMVANNHQPDMITYGTMIHGL-CRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA 348

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           GRV EA ++  +M   G I +  +  +++    D G        +ELLE+       P++
Sbjct: 349 GRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEK--DDSLSPDM 405

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            T + +I GLC+KG+  K+ ++ L+  R+   + +  +Y++MISG CK+ +++ A  L E
Sbjct: 406 VTFSTMIHGLCEKGFANKSLQI-LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYE 464

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           ++      PN++ Y +LI G C+   F  A  +   M +  C+P    YN +I GLCK  
Sbjct: 465 KISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAE 524

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           +  EA    ++  ++    D  TY  L+    +  +   AL L+ +++  GL  D+  + 
Sbjct: 525 KYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHN 584

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            LI   C   K+ E+ +   E        P   TY +++ G+   G    A   +  + +
Sbjct: 585 ILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILE 644

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            G  PD I+Y   I GLC  ++  E  Q    M+  GI P  +T   L     K G
Sbjct: 645 NGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/609 (24%), Positives = 266/609 (43%), Gaps = 90/609 (14%)

Query: 50  STSSSPSPPQSLVKTVCSMVLESYYQQFHL-----RSSPPRLNLQIDI-DSLTHEQAITV 103
           ST  + +PPQ L+              FHL      SSP RL   + I   L H    + 
Sbjct: 39  STWPAYTPPQPLL--------------FHLLRRLATSSPSRLPRLLGILPRLRHRPRFS- 83

Query: 104 VASLANEAGSMVALSFFYWAI----GFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM 159
                 E+ ++V LS F  A+      A FR     ++ C   +       R+H  +   
Sbjct: 84  ------ESAALVVLSAFSRALMPDAALAAFRRLPS-FLGCNPGV-------RSHNAL--- 126

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGL-----PLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           + +F    R  +  +    +++        P +  T N ++   C  G ++ A  +FD +
Sbjct: 127 LDAFVRARRFSDADAFFASLSHGAFGRRIAPNL-QTYNIMLRSLCVRGDLDRAVTLFDSL 185

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  D  +Y  ++  + +  R+  A   L  M       D      L+   C   FR
Sbjct: 186 RCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGG-C---FR 241

Query: 275 -GSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            G  ++A  + E++VR  G  PN+ T+ V++DGLCK G  ++A  ++ ++V ++N++P++
Sbjct: 242 NGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMV-ANNHQPDM 300

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF--------- 383
            TY  MI G C+   ++ A  +   M + GL+P+   Y SL+ G C  G           
Sbjct: 301 ITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDS 360

Query: 384 -------------------------ERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGR 417
                                    ++A DL +L+ K+   +P++  ++ +I GLC+KG 
Sbjct: 361 MSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             ++ ++L++A     + D+ +Y+ ++S   K      A+ L+ ++      P+ H Y  
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  FC+  K  ++ + + +       PT  TY ++I G  +      A ++ + M + G
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
           C  D  TYG+LI GLC+  K+D A   +  ++ KG+    V    L +  C  G    A 
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEAS 600

Query: 598 IILESLDKK 606
            +L  + +K
Sbjct: 601 QLLSEMKEK 609



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 5/262 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+S   + GRL +   +  +++ +     +   N ++   C+      A  V+ +M    
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
                 +Y  ++   C+  +  EA R+   ML++G +LD  T   LI   C DK   G  
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDG-- 563

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  L  +++ KG + +V  H +LI GLC  G  ++A +L  ++   +N  PNV TY  
Sbjct: 564 --ALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+ +    ++A  L   + E GL+P+  +Y + I G C          L++ M   G
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681

Query: 398 CTPNIYAYNAIIDGLCKKGRVQ 419
             P    +N ++  + K G +Q
Sbjct: 682 IIPTAITWNILVRAVIKYGPIQ 703



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEA----YELLKKAFQRELQADKITYTILLSEHLKQAE 452
           GC P + ++NA++D   +  R  +A      L   AF R +  +  TY I+L     + +
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ LF  +   GL PD   Y+TL++ F +  ++  +     E  +  + P    Y +
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 513 MICGYLRDGNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++ G  R+G    A++ ++++    G +P+  TY  ++ GLCK     EA   +E M+  
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMA 628
              P  +T  T+ +  C+  D  +A  +   + K   +  V   N+L++  C   RVG A
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 629 ALFFHKLLGKDQNVDRVSLAALKN 652
             F+          D +S++ ++N
Sbjct: 355 WKFW----------DSMSVSGIRN 368



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 11/219 (5%)

Query: 442 ILLSEHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           ++LS   +      AL  F R+    G NP + ++  L+ AF R ++  +++ FF  +++
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFA-SLS 147

Query: 501 AGLF-----PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
            G F     P  +TY  M+      G++  AV  F  +   G APD ITY  L+SG  K 
Sbjct: 148 HGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN 207

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW----IRT 611
           ++LD A    + M    + P  V    L     + G+   AM + E L +       + T
Sbjct: 208 NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLAT 267

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            N ++  LC       A   + +++  +   D ++   +
Sbjct: 268 YNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTM 306


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 35/430 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    E GR+  G  M  EM + G+    +T N ++   C+   V  A +++  M   G
Sbjct: 229 MIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTG 288

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF----- 273
           V  D   Y +++ + C+ G++ EA+     ML+ G   D+  + + I  F  KG+     
Sbjct: 289 VAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDH-VMFISIARFFPKGWVVLFV 347

Query: 274 RGSIK----------------------------QAFELLEEMVRKGWKPNVYTHTVLIDG 305
           R ++K                            +A  LL+E+V     P      ++I  
Sbjct: 348 RKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIA 407

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           +C +G  + ++ L  KLV +   +P+V TY  +I   C++ +M+ A  L+  M+ +G+ P
Sbjct: 408 MCSEGRLDVSYYLLGKLV-AYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRP 466

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           + +T + ++  +CK+G  E A  L   M K+G  P+I  Y++II  LC+  R++EA   L
Sbjct: 467 DMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATL 526

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           ++  +  L  D+I YT L++ +    +T+    +F  M+K GL P  HAY +LI    + 
Sbjct: 527 RQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKG 586

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K++++  + +  +  G+ P    YT +I  + R G++   +     M +   APD ITY
Sbjct: 587 NKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITY 646

Query: 546 GALISGLCKQ 555
           GAL++G+C+ 
Sbjct: 647 GALVTGICRN 656



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 218/471 (46%), Gaps = 7/471 (1%)

Query: 123 AIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN 182
           A  + K R  +    +C   LI     +R  E+   ++  F   GRL+    +   M  +
Sbjct: 159 AFAYCKARRSLDASDMCQLMLIKGMYLDR--ELSTALIRVFCREGRLEPALDVFRRMKGD 216

Query: 183 -GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
             + L       ++    E G V++  +++ EM  RG+  DA++Y +M+  YC+   V  
Sbjct: 217 EHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGA 276

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A      M+  G   D    T+L+ + C  G  G   +A  L ++M+  G  P+ +   +
Sbjct: 277 AMDIYKVMIRTGVAPDLRCYTILMASLCKDGKLG---EAENLFDKMLESGLFPD-HVMFI 332

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
            I     KGW     R  LK V   +    +   +++  G         A+ LL+ +   
Sbjct: 333 SIARFFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTS 392

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
            +LP       +I   C  G  + +Y L+  +   GC P++  YN +I  LC++ R+ +A
Sbjct: 393 NVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDA 452

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             L+     R ++ D  T +I+++ + K  E + AL LF  M K G+ P I  Y ++I  
Sbjct: 453 RALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVC 512

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            CR +++KE+E   ++ I  GL P +  YTS+I GY       +  + F  M + G  P 
Sbjct: 513 LCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPG 572

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
              YG+LI+GL K +K+ +A  + E M+ +GI+P  V    L  ++ ++GD
Sbjct: 573 PHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGD 623



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 219/525 (41%), Gaps = 53/525 (10%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N    + V+  M+ +    GRL   + ++ ++   G      T N V+   CE   
Sbjct: 389 IVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNR 448

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +   M +RGV  D S+  +MV AYC++G +  A      M   G     A    
Sbjct: 449 MDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDS 508

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +I   C       +K+A   L +M+R+G  P+   +T LI+G      T    R+F +++
Sbjct: 509 IIVCLCRMR---RLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEML 565

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +    +P  H Y ++I+G  K  K+ +A   LERM E+G+ P T  YT LI    + G+ 
Sbjct: 566 KR-GLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDV 624

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK-GRVQEAYELLKKAFQRELQADKITYTI 442
               DL+ LM K    P++  Y A++ G+C+   R      L KK  +      ++   I
Sbjct: 625 RLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQI 684

Query: 443 LLSEHLKQAETK--------QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
           + + + KQ + +         A G+   + + G+ PD+H Y  +I   CR  KM ++   
Sbjct: 685 IDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSL 744

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
                  G+ P   TYT ++   +R G+I+ A++ F  +N  GC  D ITY   I GL  
Sbjct: 745 LSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSL 804

Query: 555 QSKLDEACQF-----------------------------------YESMIGKGISPCEVT 579
             ++ EA  F                                   +E M+ +G +P    
Sbjct: 805 AGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYAN 864

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKL-----WIRTVNTLIRKL 619
             +L     K G  + A  I   + KK      W     T +R L
Sbjct: 865 YTSLLLVLAKDGRWSEADRIFTMMLKKRKMFINWWEITKTELRML 909



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 183/411 (44%), Gaps = 14/411 (3%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D +    +V  + R+G ++ A      ++  GA    A+   L+ A C      S   + 
Sbjct: 46  DPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMC------SASMST 99

Query: 282 ELLEEMVRKGWKPN---VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           E ++ +V     P+   V    +LI GLC +G  +KA  LF  ++RS    P V  Y ++
Sbjct: 100 EAMDVLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRS-GLTPPVRVYRSL 158

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEG 397
              YCK  +   A  + + M  +G+  +    T+LI   C+ G  E A D+   M G E 
Sbjct: 159 AFAYCKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEH 218

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              + YAY  +I GL + GRV    ++  +   R +Q D  TY +++  + K      A+
Sbjct: 219 VQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAM 278

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            ++  M++ G+ PD+  YT L+A+ C+  K+ E+E  F + + +GLFP    + S+   +
Sbjct: 279 DIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFF 338

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            +   +    K  + + ++ C    +   +L  G    S   EA    + ++   + P  
Sbjct: 339 PKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVN 398

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
           +    +    C +G    +  +L  L     +  + T N +I+ LC + R+
Sbjct: 399 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRM 449



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/491 (21%), Positives = 196/491 (39%), Gaps = 51/491 (10%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E   +++    N  PL  S    ++   C  G V+ A  +FD M   G+      Y+ + 
Sbjct: 100 EAMDVLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLA 159

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            AYC+  R  +A      ML +G  LD    T LI  F                      
Sbjct: 160 FAYCKARRSLDASDMCQLMLIKGMYLDRELSTALIRVF---------------------- 197

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
                           C++G  E A  +F ++   ++ + + + YT MI G  +  +++ 
Sbjct: 198 ----------------CREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDH 241

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
              +   M ++G+ P+  TY  +I  +CK      A D+  +M + G  P++  Y  ++ 
Sbjct: 242 GLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMA 301

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR-----MVK 465
            LCK G++ EA  L  K  +  L  D + +       + +   K  + LF R     + K
Sbjct: 302 SLCKDGKLGEAENLFDKMLESGLFPDHVMFI-----SIARFFPKGWVVLFVRKALKAVAK 356

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
                 +   ++L          KE++    E +T+ + P       MI     +G +  
Sbjct: 357 LDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDV 416

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           +     ++   GC P  +TY  +I  LC+Q+++D+A      M  +G+ P   T   +  
Sbjct: 417 SYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVT 476

Query: 586 EYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
            YCK G+  +A+ +   + K   +  I   +++I  LC  +R+  A     +++ +    
Sbjct: 477 AYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAP 536

Query: 643 DRVSLAALKNA 653
           D +   +L N 
Sbjct: 537 DEIIYTSLING 547



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 38/174 (21%)

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIG---------------CAPDNIT----- 544
           P      +++  + R G+ISSA+ +F R+ Q G               C+    T     
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 545 ---------------YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
                          +  LI GLC +  +D+A   +++M+  G++P      +LA+ YCK
Sbjct: 105 LVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCK 164

Query: 590 QGDS--ATAMIILESLDKKLWIRTVNT-LIRKLCSEKRVGMAALFFHKLLGKDQ 640
              S  A+ M  L  +      R ++T LIR  C E R+  A   F ++ G + 
Sbjct: 165 ARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEH 218


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 20/382 (5%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  S+ +++  +C   ++  A      +   G      T   L+   C       + +A 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC---VEDRVSEAL 70

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +L  +M     KPNV T T L++GLC++G   +A  L  ++V  D  +PN  TY  ++ G
Sbjct: 71  DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVE-DGLQPNQITYGTIVDG 125

Query: 342 YCKEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            CK      A  LL +M+E   + P+   Y+++I G  K G    A +L   M  +G  P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +I  Y+ +I+G C  G+  EA  LL++   R++  D +T++ L++  +K+ +   A  L 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ---------EAITA--GLFPTKET 509
             M+ +G+ P++    TL+   C   K+K++ + F+         +A  A  G+ P  +T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I G + +G    A + ++ M   G  PD +TY ++I+GLCKQS+LDEA Q ++SM 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            K  SP  VT  TL   YCK G
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAG 387



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 206/441 (46%), Gaps = 23/441 (5%)

Query: 179 MTNN-----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           M+NN      +P    + N ++   C    + +A   F ++   G      ++  ++   
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C   RV+EA      M     +    T T L+   C +G    + +A  LL+ MV  G +
Sbjct: 61  CVEDRVSEALDLFHQMCKPNVV----TFTTLMNGLCREG---RVVEAVALLDRMVEDGLQ 113

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           PN  T+  ++DG+CK G T  A  L  K+    + KP+V  Y+A+I G  K+ +   A+ 
Sbjct: 114 PNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQN 173

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L   M+++G+ P+  TY+ +I G C  G +  A  L+  M     +P++  ++ +I+ L 
Sbjct: 174 LFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV 233

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA------- 466
           K+G +  A +LL++     +  + +T   LL       + K AL +F  M K+       
Sbjct: 234 KEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293

Query: 467 ----GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
               G+ PD+  Y  LI+    + K  E+E+ ++E    G+ P   TY+SMI G  +   
Sbjct: 294 HAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSR 353

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A + F  M     +P+ +T+  LI+G CK   +D+  + +  M  +GI    +T +T
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L   + K G+   ++ I + +
Sbjct: 414 LIRGFRKVGNINGSLDIFQEM 434



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 213/457 (46%), Gaps = 20/457 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    +L    S   ++T  G      T N ++   C    V  A ++F +MC   
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     ++  ++   CR GRV EA   L  M++ G   +  T   ++   C  G   S  
Sbjct: 81  VV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                +EE+     KP+V  ++ +IDGL K G    A  LF+++ +     P++ TY+ M
Sbjct: 137 NLLRKMEELSH--IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCM 193

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C   K + A+ LL+ M  + + P+  T++ LI    K G+   A DL+  M   G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL------------QADKITYTILLSE 446
            PN+   N ++DGLC  G++++A E+ K A Q+ +            + D  TY IL+S 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFK-AMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
            + + +  +A  L+  M   G+ PD   Y+++I   C+Q ++ E+ + F    +    P 
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ ++I GY + G +   ++ F  M + G   + ITY  LI G  K   ++ +   ++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            MI  G+ P  +T   +      + +   A+ +LE L
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 190/386 (49%), Gaps = 27/386 (6%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  +  +LI  FC       +  A     ++ + G+ P + T   L+ GLC +    +A 
Sbjct: 14  DIYSFNILIKCFCSCS---KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            LF ++      KPNV T+T +++G C+E ++  A  LL+RM E GL PN  TY +++ G
Sbjct: 71  DLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 377 HCKVGNFERAYDLMDLMGK-EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
            CK+G+   A +L+  M +     P++  Y+AIIDGL K GR  +A  L  +   + +  
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D +TY+ +++      +  +A  L   M+   ++PD+  ++ LI A  ++  +  ++   
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI-----------GCAPDNIT 544
           QE I++G+ P   T  +++ G    G +  A++ F+ M +            G  PD  T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILES 602
           Y  LISGL  + K  EA + YE M  +GI P  VT  ++    CKQ   D AT M   +S
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM--FDS 363

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRV 625
           +  K +   I T NTLI   C    V
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMV 389


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 193/392 (49%), Gaps = 9/392 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  L+I A C  G    +  A ++  +M  +  +P+VYT+  L+DGLCK    ++A  L 
Sbjct: 201 TFNLVIKAMCKVGL---VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL- 256

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++ D   P+  T+  +I+G CK+  ++RA  L++ M  +G +PN  TY +LI+G C 
Sbjct: 257 LDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCL 316

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E+A  L+D M    C PN+  Y  II+GL K+GR  +   +L    +R    ++  
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ ++++A+ LF  M   G   +   Y+ +I   CR  K  ++ +   E  
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   T +S++ G+   GN   AV+ ++ M +     + + Y  LI GLCK  K+ 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNT 614
           EA   +  M+GKG  P  V   ++       G    AM     ++ +  D +  + T N 
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           L+  LC +  +  A    + +L +  + D V+
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 3/327 (0%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV T+  +I   CK   ++ A  +   M  +   P+  TY +L+ G CK    + A  L
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +D M  +GC P+   +N +I+GLCKKG +  A +L+   F +    +++TY  L+     
Sbjct: 257 LDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCL 316

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
           + + ++A+ L  RMV +   P++  Y T+I    +Q +  +           G    +  
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+++I G  ++G    A+  F+ M   G   + I Y A+I GLC+  K D+A +    M 
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRKLCSEKRVG 626
            KG +P   T  +L   + + G+S  A+ + + + K  + +     + LI  LC + +V 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNA 653
            A + + ++LGK    D V+ +++ N 
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMING 523



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 190/442 (42%), Gaps = 55/442 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +  R+ E  S++ EM  +G      T N ++   C+ G +  A ++ D M  +G
Sbjct: 240 LMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKG 299

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++   C  G++ +A   L  M+    + +  T   +I     +G      
Sbjct: 300 CIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGA 359

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
               L+EE   +G+  N Y ++ LI GL K+G +++A  LF K +    Y+ N   Y+A+
Sbjct: 360 CVLALMEE---RGYCVNEYVYSTLISGLFKEGKSQEAMHLF-KEMTVKGYELNTIVYSAV 415

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C++ K + A  +L  M  +G  PN  T +SL+ G  + GN  RA ++   M K   
Sbjct: 416 IDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNF 475

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAY----ELLKKAFQREL--------------------- 433
           T N   Y+ +I GLCK G+V+EA     ++L K  + ++                     
Sbjct: 476 TQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQ 535

Query: 434 ------------QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
                       Q D +TY ILL+   KQ+   +A+ L   M+  G +PD+   T  +  
Sbjct: 536 LYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL-- 593

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
               + ++E     Q+         +E    ++   L+   +  A K  + M Q    P 
Sbjct: 594 ----RMLREKLDPPQDG--------REFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPK 641

Query: 542 NITYGALISGLCKQSKLDEACQ 563
           + T+  ++  LCK  K+    Q
Sbjct: 642 HSTWARVVENLCKPKKVQAVIQ 663


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 177/370 (47%), Gaps = 11/370 (2%)

Query: 214 MCARGV-----CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           M ARG        D ++   +V   C+ G V EA R    M   G   +  T T L+  +
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDN 327
              G R   ++ F L EEM R G +PN+YT+  LI   C+ G  E+A  LF ++ VR   
Sbjct: 84  FTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRG-- 138

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              NV +Y  +I+G C+  K+  A  LL+ M+ +G  P+  T+  L+ G+ K G    A 
Sbjct: 139 IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
              + M   G  P+   YN +I G C+   +  A   L    +R L+  K+TYTIL+   
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++    +A  +   M KAGL  D H Y  L+ A C +  MK++ K FQ     G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y  MI GY R+G+   A+K    M Q G  P++ +YG  I  LCK  K  EA    + 
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDD 378

Query: 568 MIGKGISPCE 577
           M+  G+   E
Sbjct: 379 MVRAGLQTSE 388



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 173/354 (48%), Gaps = 5/354 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G ++ A  +L    + G    +V   T L++G CK G   +A R+F ++       PN  
Sbjct: 16  GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL-GLAPNEV 74

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYTA++ GY    +  +   L E M+  G+ PN  TY  LI   C+ G FERA  L D M
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G   N+ +YN +I GLC+ G++ +A +LL        +   IT+ +L+  + K  + 
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL  F +M  AG  P    Y  LIA FCR + M  + +   +    GL PTK TYT +
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R+ ++  A +    M + G   D  TYG L+  LC +  + +A + ++SM  KG+
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKR 624
            P  V    + Y Y ++G S  A+ ++  + +K  I    +    IR LC + +
Sbjct: 315 EPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 4/302 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ ++GF++  EM   G+     T N ++G  C  G  E A  +FDEM  RG+  +  SY
Sbjct: 87  GQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G++ +A + L  M   G      T  LL+  +   G  G +  A     +
Sbjct: 147 NTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY---GKAGKMSNALPFFNQ 203

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M   G++P+  T+ +LI G C+     +A R  L  ++    +P   TYT +I  + +E 
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRA-LSDMKERGLEPTKVTYTILIDSFAREN 262

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M +A  +L  M++ GL  + +TY  L+   C  GN + A  L   MG++G  P+   Y+
Sbjct: 263 HMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYD 322

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            +I G  ++G   +A +L+ +  Q+ L  +  +Y + +    K  + ++A  L   MV+A
Sbjct: 323 MMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRA 382

Query: 467 GL 468
           GL
Sbjct: 383 GL 384



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FERA  +   M               ++     G+L +   ++  M   G      T 
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V    + G +  A   F++M A G    A +Y +++  +CR   +T A+R LS M +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG      T T+LI +F  +   G   +AFE+L  M + G + + +T+ VL+  LC +G 
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMG---KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A +LF + +     +P+   Y  MI GY +E    +A  L+  M+++GL+PN+ +Y 
Sbjct: 299 MKDARKLF-QSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYG 357

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
             I   CK    + A  L+D M + G   +     A++D
Sbjct: 358 LTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 164/649 (25%), Positives = 272/649 (41%), Gaps = 76/649 (11%)

Query: 62  VKTVCSMVLESYYQ--QFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSF 119
           +K  CS++L+       F L +  P  N Q D++ L   +   V+  L NE   ++AL F
Sbjct: 3   LKEGCSLLLKKQKPLVPFVLNTINPLQNEQKDLNLLKESE---VLNKLKNEPNILLALHF 59

Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVS------------------ 161
           F        F+H    Y    T++I    +ER  + +Q ++                   
Sbjct: 60  FKSIANSNSFKHTPLTY----TTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVI 115

Query: 162 --------------SFAEIGRL------------------KEGFSMVIEMTNN----GLP 185
                         +F  IG                    +  F M+  + NN    G+ 
Sbjct: 116 NAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIE 175

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRW 245
           L   T N ++   C+   V+ A ++  EM  +G   DA SY  +V + CR+G+V EA R 
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA-RE 234

Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
           LS  +     + NA    LI  FC +     +++ FEL  EM  +G  P+V T++ +I+ 
Sbjct: 235 LSMRIKSFVPVYNA----LINGFCREH---KMEEVFELFNEMAVEGIDPDVITYSTVINT 287

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
           L + G  E A  +  K+       PNVHT+T+++ GY    ++  A  L  RM ++G  P
Sbjct: 288 LSEMGNVEMALAVLAKMFLR-GCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEP 346

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           NT  Y +LI+G C  G    A  +   M + G  PN   Y+ +IDG  K G +  A E+ 
Sbjct: 347 NTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIW 406

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            K        + + YT ++    + +    AL L   M      P+   + T I   C  
Sbjct: 407 NKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCS 466

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K + + K   +    G  P   TY  ++ G         A++    + ++    + +TY
Sbjct: 467 GKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTY 526

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
             ++SG C       A Q    ++  G  P  +T  T+ Y YCKQG+  TA+ +++ L K
Sbjct: 527 NTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTK 586

Query: 606 KLW----IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           K      + T  +L+  +C+   V  A +   K++ +    +R +  AL
Sbjct: 587 KGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL 635



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 203/429 (47%), Gaps = 17/429 (3%)

Query: 136 YIVCATSLISNGNFERAHE----------VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLP 185
           Y    +S+   G  E A E          V   +++ F    +++E F +  EM   G+ 
Sbjct: 216 YTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGID 275

Query: 186 LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DR 244
               T + V+    E+G VE A  V  +M  RG   +  ++  ++  Y   GR+ EA D 
Sbjct: 276 PDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDL 335

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
           W + M+  G+  +      LI   C     G + +A  + ++M R G  PN  T++ LID
Sbjct: 336 W-NRMIQEGSEPNTVAYNTLIHGLCS---YGKMVEAVSVSQKMERNGVFPNETTYSTLID 391

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G  K G    A  ++ K++ ++   PNV  YT M+   C+    N A  L+E M      
Sbjct: 392 GFAKAGDLVGASEIWNKMI-TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP 450

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PNT T+ + I G C  G  E A  +++ M + GC PN+  YN ++DGL    R +EA ++
Sbjct: 451 PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQI 510

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           + +  + E++++ +TY  +LS        K AL +  +++  G  PD   Y T+I A+C+
Sbjct: 511 VGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCK 570

Query: 485 QKKMKESEKFFQEAITAGL-FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           Q ++K + +        G  +P   TYTS++ G      +  AV +  +M   G  P+  
Sbjct: 571 QGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRA 630

Query: 544 TYGALISGL 552
           T+ AL+ GL
Sbjct: 631 TWNALVRGL 639



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 149/373 (39%), Gaps = 51/373 (13%)

Query: 90  IDIDSLTHEQAITVVASLANEAGSMVALSFFYW---AIGFAKFRHFMRLYI----VCATS 142
           ID D +T+   I  ++ + N   ++  L+  +    +     F   M+ Y     +C   
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333

Query: 143 LISNGNFERAHE----VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
            + N   +   E        ++      G++ E  S+  +M  NG+    +T + ++   
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGF 393

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
            + G +  A E++++M   G   +   Y  MV   CR      A   +  M +     + 
Sbjct: 394 AKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNT 453

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL------------ 306
            T    I   C     G  + A ++L +M + G  PNV T+  ++DGL            
Sbjct: 454 ITFNTFIKGLC---CSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQI 510

Query: 307 -----------------------CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
                                  C  G  + A ++  KL+     KP+  TY  +I  YC
Sbjct: 511 VGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT-KPDSITYNTVIYAYC 569

Query: 344 KEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           K+ ++  A  L++R+ ++G   P+  TYTSL++G C     + A   +D M  EG  PN 
Sbjct: 570 KQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNR 629

Query: 403 YAYNAIIDGLCKK 415
             +NA++ GL  K
Sbjct: 630 ATWNALVRGLFSK 642


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 20/382 (5%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D  S+ +++  +C   ++  A      +   G      T   L+   C       + +A 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC---VEDRVSEAL 70

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +L  +M     KPNV T T L++GLC++G   +A  L  ++V  D  +PN  TY  ++ G
Sbjct: 71  DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVE-DGLQPNQITYGTIVDG 125

Query: 342 YCKEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            CK      A  LL +M+E   + P+   Y+++I G  K G    A +L   M  +G  P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +I  Y+ +I+G C  G+  EA  LL++   R++  D +T++ L++  +K+ +   A  L 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ---------EAITA--GLFPTKET 509
             M+ +G+ P++    TL+   C   K+K++ + F+         +A  A  G+ P  +T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y  +I G + +G    A + ++ M   G  PD +TY ++I+GLCKQS+LDEA Q ++SM 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
            K  SP  VT  TL   YCK G
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAG 387



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 206/441 (46%), Gaps = 23/441 (5%)

Query: 179 MTNN-----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           M+NN      +P    + N ++   C    + +A   F ++   G      ++  ++   
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C   RV+EA      M     +    T T L+   C +G    + +A  LL+ MV  G +
Sbjct: 61  CVEDRVSEALDLFHQMCKPNVV----TFTTLMNGLCREG---RVVEAVALLDRMVEDGLQ 113

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           PN  T+  ++DG+CK G T  A  L  K+    + KP+V  Y+A+I G  K+ +   A+ 
Sbjct: 114 PNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQN 173

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L   M+++G+ P+  TY+ +I G C  G +  A  L+  M     +P++  ++ +I+ L 
Sbjct: 174 LFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV 233

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA------- 466
           K+G +  A +LL++     +  + +T   LL       + K AL +F  M K+       
Sbjct: 234 KEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293

Query: 467 ----GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
               G+ PD+  Y  LI+    + K  E+E+ ++E    G+ P   TY+SMI G  +   
Sbjct: 294 HAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSR 353

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  A + F  M     +P+ +T+  LI+G CK   +D+  + +  M  +GI    +T +T
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L   + K G+   ++ I + +
Sbjct: 414 LIRGFRKVGNINGSLDIFQEM 434



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 213/457 (46%), Gaps = 20/457 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    +L    S   ++T  G      T N ++   C    V  A ++F +MC   
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     ++  ++   CR GRV EA   L  M++ G   +  T   ++   C  G   S  
Sbjct: 81  VV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                +EE+     KP+V  ++ +IDGL K G    A  LF+++ +     P++ TY+ M
Sbjct: 137 NLLRKMEELSH--IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCM 193

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C   K + A+ LL+ M  + + P+  T++ LI    K G+   A DL+  M   G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL------------QADKITYTILLSE 446
            PN+   N ++DGLC  G++++A E+ K A Q+ +            + D  TY IL+S 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFK-AMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
            + + +  +A  L+  M   G+ PD   Y+++I   C+Q ++ E+ + F    +    P 
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+ ++I GY + G +   ++ F  M + G   + ITY  LI G  K   ++ +   ++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            MI  G+ P  +T   +      + +   A+ +LE L
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 190/386 (49%), Gaps = 27/386 (6%)

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  +  +LI  FC       +  A     ++ + G+ P + T   L+ GLC +    +A 
Sbjct: 14  DIYSFNILIKCFCSCS---KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
            LF ++      KPNV T+T +++G C+E ++  A  LL+RM E GL PN  TY +++ G
Sbjct: 71  DLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 377 HCKVGNFERAYDLMDLMGK-EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
            CK+G+   A +L+  M +     P++  Y+AIIDGL K GR  +A  L  +   + +  
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D +TY+ +++      +  +A  L   M+   ++PD+  ++ LI A  ++  +  ++   
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI-----------GCAPDNIT 544
           QE I++G+ P   T  +++ G    G +  A++ F+ M +            G  PD  T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILES 602
           Y  LISGL  + K  EA + YE M  +GI P  VT  ++    CKQ   D AT M   +S
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM--FDS 363

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRV 625
           +  K +   I T NTLI   C    V
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMV 389


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 203/441 (46%), Gaps = 7/441 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ SF + GR  +   ++ EM   G   + +  T N V+      G +E A E+ + M  
Sbjct: 210 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-R 268

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
               A + +Y  ++      G V +       M + G +    T   +I      G   +
Sbjct: 269 LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 328

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
            +  F    EM   G  P+V T+  L++G CK G  ++A  LF  L R+    P V TY 
Sbjct: 329 AQVKFA---EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA-GLAPTVLTYN 384

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             I GYC+   +  A +L E M EQG LPN  TYT L+ G   V +   A +  D M  +
Sbjct: 385 IRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+ +AYN  I      G +  A EL +      + +D +TY IL+    K    K A
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             L  +MV  GL PD   YT LI A C +  ++E+ K F   I+ GL P+  T+T +I  
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           Y R GN+ SA  +F++M + G  P+ ITY  LI  LC+  +   A   +  M+ +G+   
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624

Query: 577 EVTRVTLAYEYCKQGDSATAM 597
           + T   L    CK G+   AM
Sbjct: 625 KYTYTLLIDGNCKVGNWEDAM 645



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 14/434 (3%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA--ILDNATLTLLITA 267
           V +EM   G+     +Y  ++ ++ + GR  +    L  M  RG+  + ++ T  ++IT 
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 250

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
              KG    +++A EL+E M R   K + +T+  LI GL  +G  +K + L L++  ++ 
Sbjct: 251 LTRKG---DLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM-ENEG 305

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             P V TY AMI G  +   +  A++    M+  GLLP+  TY SL+ G+CK GN + A 
Sbjct: 306 IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEAL 365

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L   + + G  P +  YN  IDG C+ G ++EA  L ++  ++    +  TYTIL+   
Sbjct: 366 LLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 425

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L       A   F  M+  GL PD  AY T I A      +  + +  +  +  G+    
Sbjct: 426 LNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDT 485

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TY  +I G  + GN+  A +   +M   G  PD ITY  LI   C++  L EA + + +
Sbjct: 486 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 545

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSE 622
           MI  G+ P  VT   + + YC++G+  +A      ++ E ++      T N LI  LC  
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI--TYNVLIHALCRM 603

Query: 623 KRVGMAALFFHKLL 636
            R  +A+  FH++L
Sbjct: 604 GRTQLASHHFHEML 617



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 207/462 (44%), Gaps = 53/462 (11%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM--------------VSSFAEIGRLKEGFSMVIEMTN 181
           Y V  T L   G+ E A E+++ M              ++     G +K+ + + +EM N
Sbjct: 244 YNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMEN 303

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
            G+     T N ++    + GLVE A+  F EM A G+  D  +Y  ++  YC+ G    
Sbjct: 304 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG---- 359

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
                                             ++K+A  L  ++ R G  P V T+ +
Sbjct: 360 ----------------------------------NLKEALLLFGDLRRAGLAPTVLTYNI 385

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
            IDG C+ G  E+A R+  + +      PNV TYT ++ G      +  A    + M  +
Sbjct: 386 RIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           GL P+   Y + I     +G+  RA +L +++  EG + +   YN +I GLCK G +++A
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            EL  K     LQ D ITYT L+  H ++   ++A  +F  M+  GL P    +T +I A
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           +CR+  +  +  +F++ +  G+ P + TY  +I    R G    A  +F  M + G   +
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             TY  LI G CK    ++A +FY  M   GI P  +T   L
Sbjct: 625 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 666



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 4/324 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + + G LKE   +  ++   GL     T N  +   C LG +E A  + +EM  +G
Sbjct: 351 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++     +  +  A  +   ML +G   D        T  C +   G I 
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYN---TRICAELILGDIA 467

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A EL E ++ +G   +  T+ +LI GLCK G  + A  L +K+V S+  +P+  TYT +
Sbjct: 468 RALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV-SNGLQPDCITYTCL 526

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  +C+   +  A  +   M   GLLP+  T+T +I+ +C+ GN   AY     M +EG 
Sbjct: 527 IHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGV 586

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PN   YN +I  LC+ GR Q A     +  +R L A+K TYT+L+  + K    + A+ 
Sbjct: 587 EPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMR 646

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAF 482
            +  M + G++PD   +  L+  F
Sbjct: 647 FYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 41/293 (13%)

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAIIDGLC 413
           E M + G+ P+  TY +L+    K G  ++   L+  M   G  C PN   YN +I GL 
Sbjct: 193 EEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 252

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           +KG ++EA EL++   +   +A   TY  L++  L +   K+   L   M          
Sbjct: 253 RKGDLEEAAELVE-GMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM---------- 301

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
                           E+E         G+ PT  TY +MI G L+ G + +A   F  M
Sbjct: 302 ----------------ENE---------GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
             +G  PD ITY +L++G CK   L EA   +  +   G++P  +T       YC+ GD 
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDL 396

Query: 594 ATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
             A I+ E + ++  +  V T   L++   +   + MA  FF ++L K    D
Sbjct: 397 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 218/450 (48%), Gaps = 13/450 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM---C 215
           ++  F + G  + G S +  M   GL       N ++   C+ G++  AE     M   C
Sbjct: 35  LIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC 94

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A  V     SY +++  YC+   + +A  +L  M + G        + ++ +FC  G   
Sbjct: 95  APNVV----SYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTG--- 147

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++ +A ++  EM  KG +P++    VL+ GL +     +A  LF + + S   KP+V TY
Sbjct: 148 NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELF-RSMNSRGCKPDVVTY 206

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-- 393
             MI+G CK +K++ A  LLERMK++ + P   TYT+LI   CK    ++AY++ + M  
Sbjct: 207 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           G   CT   Y+   +I+GLCK  R  EA E+ ++   R +    +TY  LL   L  A+ 
Sbjct: 267 GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 326

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A+ L   M+     P++  Y  LI++ C+  +++E+ K        G  P+ + +  +
Sbjct: 327 QDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 386

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +    R G +  A + ++ M++I C     +   L+ G+ ++  +DEA  F + M   GI
Sbjct: 387 LSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGI 446

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESL 603
            P + T   L    C QG +  A  ++E L
Sbjct: 447 VPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 19/384 (4%)

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV----TEADRWLSAMLDRGAI 255
           E  LV  AE + +EM   G   D  S+ L++  + + G      ++ DR L A L   AI
Sbjct: 6   EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAI 65

Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
           L N     LI+  C  G    + +A   L+ M +    PNV ++ ++IDG CK    EKA
Sbjct: 66  LYNN----LISCLCKAGM---LAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKA 117

Query: 316 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIY 375
              FL+ +    + P  H Y++++  +CK   +++A  +   M  +G  P+   +  L+ 
Sbjct: 118 LA-FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 176

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  +      A +L   M   GC P++  YN +I GLCK  ++ EA  LL++  Q ++  
Sbjct: 177 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT--LIAAFCRQKKMKESEK 493
             +TYT L+    K A  +QA  +F +M +        AY+   LI   C+ ++  E+++
Sbjct: 237 TFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK--YFQRMNQIGCAPDNITYGALISG 551
            FQE    G+ PT  TY +++ G L    +  A++  YF  ++Q+  AP+  TY  LIS 
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM-LDQVP-APNMFTYEILISS 354

Query: 552 LCKQSKLDEACQFYESMIGKGISP 575
           LCK  +++EA +   +M  KG  P
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVP 378



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 176/377 (46%), Gaps = 9/377 (2%)

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V +A+  +  M   G   D  +  LLI  F   G   S ++    L+ M+  G  PN   
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSG---SFQRGCSQLDRMLEAGLFPNAIL 66

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  LI  LCK G   +A     ++    +  PNV +Y  +I GYCK   + +A   L  M
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRM--PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           +E G  P  + Y+S++   CK GN  +A D+   M  +GC P+I  +N ++ GL +  ++
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA EL +    R  + D +TY  +++   K  +  +A+ L  RM +  ++P    YTTL
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS---MICGYLRDGNISSAVKYFQRMNQ 535
           I   C+  +++++ + F E +  G  P  E   S   +I G  +      A + FQ M  
Sbjct: 245 IDHLCKFARLQQAYEVF-EKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRG 303

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G +P  +TY  L+ GL   +KL +A +    M+ +  +P   T   L    CK      
Sbjct: 304 RGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEE 363

Query: 596 AMIILESLDKKLWIRTV 612
           A  +L ++  K ++ ++
Sbjct: 364 AFKLLSAMRDKGFVPSL 380



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 167/380 (43%), Gaps = 4/380 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + +   +++  + + EM   G P      + +V   C+ G V  A +VF EM A+G
Sbjct: 104 IIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG 163

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  ++ +++    R  ++ EA     +M  RG   D  T   +I   C       + 
Sbjct: 164 CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK---WKKLD 220

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVHTYTA 337
           +A  LLE M ++   P   T+T LID LCK    ++A+ +F K+           ++   
Sbjct: 221 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G CK  +   A+ + + M+ +G+ P   TY +L+ G       + A +L   M  + 
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN++ Y  +I  LCK  +V+EA++LL     +        + +LLS   +      A 
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M +      + +   L+    R+  + E++ F ++    G+ P K TY  ++ G 
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460

Query: 518 LRDGNISSAVKYFQRMNQIG 537
              G    A K  + + + G
Sbjct: 461 CWQGKADQARKLVEELVRDG 480



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 68/324 (20%)

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +AE ++E MK  G  P+  ++  LI G  K G+F+R    +D M + G  PN   YN +I
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             LCK G + EA   LK+                + +H                      
Sbjct: 72  SCLCKAGMLAEAESYLKR----------------MPQHCA-------------------- 95

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P++ +Y  +I  +C+ + ++++  F +E    G  PT   Y+S++  + + GN+S A+  
Sbjct: 96  PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 155

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           F  M   GC PD + +  L+SGL +  K+ EA + + SM  +G  P  VT          
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT---------- 205

Query: 590 QGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
                                  NT+I  LC  K++  A     ++  +D +   V+   
Sbjct: 206 ----------------------YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243

Query: 650 LKNACYESNKYALFSDLSQRIAEG 673
           L +   +  +     ++ +++AEG
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAEG 267



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 52/112 (46%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           S + +  F  + ++ + ++S  A  GRL + F +  EM+      +  + N ++      
Sbjct: 369 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 428

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
           G V+ A++   +M   G+  D  +Y  +VV  C  G+  +A + +  ++  G
Sbjct: 429 GSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 217/437 (49%), Gaps = 8/437 (1%)

Query: 117 LSFFYWAIGFAK--FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFS 174
            SFF W    A   FRH +  Y      L S+  F  A  ++Q +VS   + G     F+
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGK-GSASAVFA 59

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
            ++E        I    + ++    ELG +  A + +        C    + + ++    
Sbjct: 60  AILETKGTQRSDIY-VFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLM 118

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           ++        +   +L+ G         +L+  FC +G    I+ A  + + + + G +P
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEG---DIRVAQSVFDAITKWGLRP 175

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V ++  L++G  + G  ++ FRL    + +    P+V+TY+ +I+G CKE KM+ A  L
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRL-KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKL 234

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            + M E+GL+PN+ T+T+LI GHCK G  + A ++   M  +   P++  YNA+I GLCK
Sbjct: 235 FDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCK 294

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           KG +++A++L+ +     L+ DKITYT L+    K+ +   A      M++  +  D  A
Sbjct: 295 KGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVA 354

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT LI+  C++ +  ++EK  +E ++ GL P   TYT +I  + + G++    K  + M 
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ 414

Query: 535 QIGCAPDNITYGALISG 551
           + G  P  +TY  L++G
Sbjct: 415 RDGHVPSVVTYNVLMNG 431



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 204/402 (50%), Gaps = 7/402 (1%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKG 272
           +C+  + ++A S  L+ V   R G+ + +  + + +  +G    D    + LITA+ + G
Sbjct: 29  LCSHQMFSEAKS--LIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLELG 86

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           F       + L  E   K   P      VL + L K  + +  +  + +++    Y  ++
Sbjct: 87  FLRDAIDCYRLTRE--HKFCVPFDTCRKVL-EHLMKLKYFKLVWGFYEEILEC-GYPASL 142

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           + +  ++  +CKE  +  A+ + + + + GL P+  +Y +L+ G+ ++G+ +  + L   
Sbjct: 143 YFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P++Y Y+ +I+GLCK+ ++ +A +L  +  ++ L  + +T+T L+  H K   
Sbjct: 203 MHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGW 262

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+ ++ +M+   L PD+  Y  LI   C++  +K++     E    GL P K TYT+
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTT 322

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  ++G++ +A ++ + M Q     D++ Y ALISGLC++ +  +A +    M+  G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           + P   T   +  E+CK+GD      +L+ + +   + +V T
Sbjct: 383 LKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424


>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
 gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 209/416 (50%), Gaps = 13/416 (3%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           C + +F  IGRL E      +M   G LP I +  N  + +     L+E A + FDEM A
Sbjct: 90  CEIKNFGLIGRLLE------DMKQLGYLPDIWA-FNIYLNLLFRENLLELALKFFDEMVA 142

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           +G   D  +Y ++V   C+  +  +A  +   M+++G   D    T L+   CD G    
Sbjct: 143 KGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGG---K 199

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A+EL    ++   K N      L+ G CK G   KA  +    +     +P++ TY 
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAI-KSFMSKHGCEPDLITYN 258

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +++ +C    +  A   +++M+  G+ P+  +Y  L+ G CK    ++AY LM+ M ++
Sbjct: 259 ILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEK 318

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G    + +YN +I  LCK    ++AY L ++  Q+++  D  T+  L+   L +     A
Sbjct: 319 GLCDTV-SYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIA 377

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GL   M +  L PD+  YTT++  FC+ +K++ ++  F++ I  G+ P   +Y ++I G
Sbjct: 378 KGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALING 437

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
             +   +S A+  ++ M   GC PD +T+  +I GL ++ +L  ACQ ++ M+ KG
Sbjct: 438 LCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKG 493



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 214/466 (45%), Gaps = 52/466 (11%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V +  ++   ++G + E   +  EMT +  P+ +   NR +G+       + AE  +  M
Sbjct: 11  VFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM 70

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD----NATLTLLITAFCD 270
             +G      +Y   + A C +       R L  M   G + D    N  L LL      
Sbjct: 71  IPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLL------ 124

Query: 271 KGFRGSIKQ-AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             FR ++ + A +  +EMV KG +P+V T+T+++D LCK    +KA   F + + +    
Sbjct: 125 --FRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVE-FWRCMVNKGLS 181

Query: 330 PNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           P++   TA++ G C   K++ A E+ +  MK + +  N   + SL+ G CK G   +A  
Sbjct: 182 PDMKACTALVVGLCDGGKVDLAYELTVGEMKGE-MKFNNLIFNSLMSGFCKSGRISKALA 240

Query: 389 LMDLMGKEGCTPN-----------------------------------IYAYNAIIDGLC 413
           +   M K GC P+                                   +Y+YN ++ GLC
Sbjct: 241 IKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLC 300

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           K  R+ +AY+L+   +++ L  D ++Y  ++    K   T++A  LF  M +  + PD+ 
Sbjct: 301 KANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVG 359

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            + TLI AF  +     ++   Q      L P    YT+++  + +   I  A   F+ M
Sbjct: 360 TFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDM 419

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            +IG +PD ++Y ALI+GLCK SK+ EA   YE M  +G  P EVT
Sbjct: 420 IEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVT 465



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 3/348 (0%)

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G  ++A R+F ++ +SD        Y   I       + + AE    RM  QG     
Sbjct: 21  KVGLIDEAIRIFDEMTQSDC-PVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTP 79

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY+  I   C++ NF     L++ M + G  P+I+A+N  ++ L ++  ++ A +   +
Sbjct: 80  FTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDE 139

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              +  + D +TYTI++    K  +  +A+  +  MV  GL+PD+ A T L+   C   K
Sbjct: 140 MVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGK 199

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           +  + +     +   +      + S++ G+ + G IS A+     M++ GC PD ITY  
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNI 259

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           L++  C    L+ A +  + M   G+ P   +   L    CK      A  ++ ++ +K 
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319

Query: 608 WIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
              TV  NT+I  LC       A   F ++  KD   D  + A L  A
Sbjct: 320 LCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKA 367



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 12/198 (6%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N   + A I    K G + EA  +  +  Q +       Y   +   + ++    A   +
Sbjct: 8   NRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYY 67

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            RM+  G +     Y+  I+A C  K      +  ++    G  P    +   +    R+
Sbjct: 68  SRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRE 127

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP----- 575
             +  A+K+F  M   G  PD +TY  ++  LCK  + D+A +F+  M+ KG+SP     
Sbjct: 128 NLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKAC 187

Query: 576 -------CEVTRVTLAYE 586
                  C+  +V LAYE
Sbjct: 188 TALVVGLCDGGKVDLAYE 205



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 7/201 (3%)

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           L A+++ +   +++ +K     +A+ +F  M ++        Y   I     + +   +E
Sbjct: 5   LGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAE 64

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
            ++   I  G   T  TY+  I       N     +  + M Q+G  PD   +   ++ L
Sbjct: 65  SYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLL 124

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAM---IILESLDKKL 607
            +++ L+ A +F++ M+ KG  P  VT   +    C  KQ D A      ++ + L   +
Sbjct: 125 FRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDM 184

Query: 608 WIRTVNTLIRKLCSEKRVGMA 628
             +    L+  LC   +V +A
Sbjct: 185 --KACTALVVGLCDGGKVDLA 203


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 194/380 (51%), Gaps = 9/380 (2%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           +IT FC       I  A+++L+ M  KG+ P++ T+ +LI  LC +G  + A     +L+
Sbjct: 132 IITGFCRAN---RIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           + +N KP V TYT +I     +  ++ A  LL+ M E  L P+  TY S+I G C+ G  
Sbjct: 189 K-ENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           +RA+ ++  +  +G  P++  YN ++ GL  +G+ +  YEL+     R  +A+ +TY++L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +S   +  + ++ +GL   M K GL PD + Y  LIAA C++ ++  + +     I+ G 
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y +++    +      A+  F+++ ++GC+P+  +Y ++ S L        A  
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII---LESLDKKLWIRTVNTLIRK 618
               M+ KG+ P  +T  +L    C+ G  D A  +++   +ES + K  + + N ++  
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487

Query: 619 LCSEKRVGMAALFFHKLLGK 638
           LC   RV  A      ++ K
Sbjct: 488 LCKVSRVSDAIEVLAAMVDK 507



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           + N+G P + +  N ++   C    ++ A +V D M  +G   D  +Y +++ + C  G 
Sbjct: 118 LENHGHPDLIA-YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  A  + + +L         T T+LI A      +G I +A +LL+EM+    +P+++T
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATL---LQGGIDEAMKLLDEMLEINLQPDMFT 233

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  +I G+C++G+ ++AF++ +  + S  Y P+V TY  ++ G   + K      L+  M
Sbjct: 234 YNSIIRGMCREGYVDRAFQI-ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDM 292

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G   N  TY+ LI   C+ G  E    L+  M K+G  P+ Y Y+ +I  LCK+GRV
Sbjct: 293 VARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRV 352

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
             A E+L          D + Y  +L+   KQ    +AL +F ++ + G +P+  +Y ++
Sbjct: 353 DLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSM 412

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF--QRMNQI 536
            +A         +     E +  G+ P   TY S+I    RDG +  A++      M   
Sbjct: 413 FSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESS 472

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            C P  ++Y  ++ GLCK S++ +A +   +M+ KG  P E T
Sbjct: 473 ECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 180/392 (45%), Gaps = 40/392 (10%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G+  ++   L  +V KG KP+V   T LI GL      +KA ++   L   ++  P++  
Sbjct: 71  GNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL--ENHGHPDLIA 128

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+I+G+C+  +++ A  +L+RMK +G  P+  TY  LI   C  G  + A +  + + 
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188

Query: 395 KEGC-----------------------------------TPNIYAYNAIIDGLCKKGRVQ 419
           KE C                                    P+++ YN+II G+C++G V 
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A++++     +    D ITY ILL   L Q + +    L   MV  G   ++  Y+ LI
Sbjct: 249 RAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLI 308

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           ++ CR  K++E     ++    GL P    Y  +I    ++G +  A++    M   GC 
Sbjct: 309 SSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCV 368

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-I 598
           PD + Y  +++ LCKQ + DEA   +E +   G SP   +  ++       G    A+ +
Sbjct: 369 PDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGM 428

Query: 599 ILESLDKKLWIR--TVNTLIRKLCSEKRVGMA 628
           ILE LDK +     T N+LI  LC +  V  A
Sbjct: 429 ILEMLDKGVDPDGITYNSLISCLCRDGMVDEA 460



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 5/332 (1%)

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           CK G   ++   FL+ + +  +KP+V   T +I G    + +++A  ++  ++  G  P+
Sbjct: 68  CKAGNFNESL-YFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PD 125

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              Y ++I G C+    + AY ++D M  +G +P+I  YN +I  LC +G +  A E   
Sbjct: 126 LIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKN 185

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  +   +   +TYTIL+   L Q    +A+ L   M++  L PD+  Y ++I   CR+ 
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            +  + +      + G  P   TY  ++ G L  G   +  +    M   GC  + +TY 
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYS 305

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            LIS +C+  K++E     + M  KG+ P       L    CK+G    A+ +L+ +   
Sbjct: 306 VLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISD 365

Query: 607 LWIRTV---NTLIRKLCSEKRVGMAALFFHKL 635
             +  +   NT++  LC +KR   A   F KL
Sbjct: 366 GCVPDIVNYNTILACLCKQKRADEALSIFEKL 397



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 136/310 (43%), Gaps = 11/310 (3%)

Query: 329 KPNVHTYT-------AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           KP  HT           +S  CK    N +   L  +  +G  P+    T LI+G     
Sbjct: 47  KPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSK 106

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
             ++A  +M ++   G  P++ AYNAII G C+  R+  AY++L +   +    D +TY 
Sbjct: 107 TIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYN 165

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           IL+     +     AL    +++K    P +  YT LI A   Q  + E+ K   E +  
Sbjct: 166 ILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEI 225

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            L P   TY S+I G  R+G +  A +    ++  G APD ITY  L+ GL  Q K +  
Sbjct: 226 NLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAG 285

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT---VNTLIRK 618
            +    M+ +G     VT   L    C+ G     + +L+ + KK         + LI  
Sbjct: 286 YELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAA 345

Query: 619 LCSEKRVGMA 628
           LC E RV +A
Sbjct: 346 LCKEGRVDLA 355



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 6/280 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G +   F ++  +++ G      T N ++      G  E   E+  +M ARG  A+  +Y
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++ + CR G+V E    L  M  +G   D      LI A C +   G +  A E+L+ 
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKE---GRVDLAIEVLDV 361

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M+  G  P++  +  ++  LCK+   ++A  +F KL       PN  +Y +M S      
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEV-GCSPNASSYNSMFSALWSTG 420

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYA 404
              RA  ++  M ++G+ P+  TY SLI   C+ G  + A +L+  M  E   C P++ +
Sbjct: 421 HKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVS 480

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
           YN ++ GLCK  RV +A E+L     +  + ++ TYT L+
Sbjct: 481 YNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLI 520



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 19/270 (7%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFSMVIEMT 180
           Y +    L++ G +E  +E+M  MV               SS    G+++EG  ++ +M 
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK 328

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             GL       + ++   C+ G V+ A EV D M + G   D  +Y  ++   C+  R  
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388

Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
           EA      + + G   + ++   + +A    G +    +A  ++ EM+ KG  P+  T+ 
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK---VRALGMILEMLDKGVDPDGITYN 445

Query: 301 VLIDGLCKKGWTEKAFRLFLKL-VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            LI  LC+ G  ++A  L + + + S   KP+V +Y  ++ G CK  +++ A  +L  M 
Sbjct: 446 SLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMV 505

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           ++G  PN  TYT LI G    G    A DL
Sbjct: 506 DKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 6/260 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ + G+ ++ +M   G      T + ++   C  G VE    +  +M  +G+  D   Y
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++ A C+ GRV  A   L  M+  G + D      ++   C +       +A  + E+
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ---KRADEALSIFEK 396

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           +   G  PN  ++  +   L   G   +A  + L+++      P+  TY ++IS  C++ 
Sbjct: 397 LGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML-DKGVDPDGITYNSLISCLCRDG 455

Query: 347 KMNRA-EMLLE-RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            ++ A E+L++  M+     P+  +Y  ++ G CKV     A +++  M  +GC PN   
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515

Query: 405 YNAIIDGLCKKGRVQEAYEL 424
           Y  +I+G+   G + +A +L
Sbjct: 516 YTFLIEGIGFGGCLNDARDL 535



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 95/237 (40%), Gaps = 8/237 (3%)

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           LS   K     ++L     +V  G  PD+   T LI      K + ++ +        G 
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG- 122

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    Y ++I G+ R   I SA +   RM   G +PD +TY  LI  LC +  LD A +
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLC 620
           F   ++ +   P  VT   L      QG    AM +L+ +   + +  + T N++IR +C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSDLSQRIAEG 673
            E  V  A      +  K    D ++   L        K    Y L SD+  R  E 
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 11/349 (3%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEA----DRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           G   +A +Y  ++ +    GRV +     +RW+    DR    D  +  ++I   C  G 
Sbjct: 41  GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ---DRVYSPDVWSFNVVIKGVCRVG- 96

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +++A EL+E M   G  P+  TH +L+DGLC+     +   +  +L R     PNV 
Sbjct: 97  --QVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV 154

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+T++ISGYCK  K+  A  +   M   G++PNT TY  LI G+ KVG+   A ++   M
Sbjct: 155 TFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQM 214

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            +  C P++  ++++IDG C+ G++ +A  +     Q  +Q +  T++I++    KQ  +
Sbjct: 215 TRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 274

Query: 454 KQALGLFCRM-VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            +A+GL   + ++  + P    Y  +I   C+  K+ E+    +     G  P K TYT 
Sbjct: 275 DEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTI 334

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           +I GY     IS A+ +F  M + GC+PD+IT    IS L K    +E 
Sbjct: 335 LIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 383



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 156/309 (50%), Gaps = 4/309 (1%)

Query: 274 RGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           RG +     L E  ++ + + P+V++  V+I G+C+ G  +KA  L  ++       P+ 
Sbjct: 59  RGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM-NEFGCSPDT 117

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            T+  ++ G C+  +++R   +L R++  G+ +PN  T+TS+I G+CK G  E A  + +
Sbjct: 118 VTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 177

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M   G  PN   YN +I+G  K G +  A E+ ++  +     D +T++ L+  + +  
Sbjct: 178 DMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCG 237

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE-AITAGLFPTKETY 510
           +   AL ++  M +  + P+++ ++ +I + C+Q +  E+     E  +   + P    Y
Sbjct: 238 QLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIY 297

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
             +I    + G +  A    + M + GC PD  TY  LI G C +S++ EA  F+  M+ 
Sbjct: 298 NPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 357

Query: 571 KGISPCEVT 579
            G SP  +T
Sbjct: 358 AGCSPDSIT 366



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 155/323 (47%), Gaps = 2/323 (0%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL +    G +   Y +  L+  L  +G       LF + ++   Y P+V ++  +I G 
Sbjct: 33  LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 92

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPN 401
           C+  ++ +A  L+ERM E G  P+T T+  L+ G C+     R ++++  + ++G C PN
Sbjct: 93  CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 152

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  + ++I G CK G++++A  +        +  + +TY +L++ + K  +   A+ ++ 
Sbjct: 153 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 212

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           +M +    PD+  +++LI  +CR  ++ ++ + + +     + P   T++ +I    +  
Sbjct: 213 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 272

Query: 522 NISSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
               A+     +N +   AP    Y  +I  LCK  K+DEA    + M  KG  P + T 
Sbjct: 273 RSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 332

Query: 581 VTLAYEYCKQGDSATAMIILESL 603
             L   YC +   + A++    +
Sbjct: 333 TILIIGYCMKSRISEAIMFFHEM 355



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 149/304 (49%), Gaps = 39/304 (12%)

Query: 333 HTYTAMISGYCKEEKMNRAEMLLER-MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + Y  ++S      +++    L ER ++++   P+  ++  +I G C+VG  ++A +L++
Sbjct: 47  YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 106

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + GC+P+   +N ++DGLC+   V   +E+L     R LQ D +             
Sbjct: 107 RMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL-----RRLQRDGVCM----------- 150

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
                             P++  +T++I+ +C+  K++++   + + + +G+ P   TY 
Sbjct: 151 ------------------PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYN 192

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I GY + G++ SAV+ +Q+M ++ C PD +T+ +LI G C+  +LD+A + +  M   
Sbjct: 193 VLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 252

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGM 627
            I P   T   + +  CKQ  S  A+ +L  L+ +  I       N +I  LC   +V  
Sbjct: 253 RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 312

Query: 628 AALF 631
           A L 
Sbjct: 313 ANLI 316



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 6/272 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V        +  G  ++  +  +G  +P +  T   V+   C+ G +E A  V+++M A
Sbjct: 123 LVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV-TFTSVISGYCKAGKLEDAMAVYNDMVA 181

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +Y +++  Y ++G +  A      M       D  T + LI  +C  G    
Sbjct: 182 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCG---Q 238

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +  +M +   +PNVYT +++I  LCK+  +++A  L  +L    +  P    Y 
Sbjct: 239 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 298

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK  K++ A ++ + M+E+G  P+  TYT LI G+C       A      M + 
Sbjct: 299 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 358

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           GC+P+    N  I  L K G   E   +++ A
Sbjct: 359 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLA 390


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 247/573 (43%), Gaps = 65/573 (11%)

Query: 69  VLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAK 128
           ++ S +      +SPP       I    H   +         A ++VA+ FF+  +    
Sbjct: 17  LITSLFYSHPFSTSPP------PISDAAHRTLLLNSIRTLETADAVVAVDFFHRMLTLTP 70

Query: 129 F---RHFMRLYIVCATS------------LISNGNFERAHEVMQCMVSSFAEIGRLKEGF 173
           F   + F  L+ + A S            L S G+       +   ++    + +   GF
Sbjct: 71  FPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGF 130

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           +++  MT  GL     TLN +V   C  G V +A  + ++M   G   +A +Y  +V   
Sbjct: 131 AVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGL 190

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C++G  + A   L  M+ R    +      ++   C +G  G   +A  LL EM     +
Sbjct: 191 CKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVG---EALGLLHEMGVVNVE 247

Query: 294 PNVYTHTVLIDGLCKK--GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
           PNV T+  LI GLC +  GW E    LF ++V      P+V T++ ++ G+CKE  + RA
Sbjct: 248 PNVVTYNCLIQGLCGEFGGWRE-GVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRA 306

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG--CTPNIYAYNAII 409
           E ++  M   G+ PN  TY SLI G+C     E A  +  LM +EG  C P++  +N++I
Sbjct: 307 ESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLI 366

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS-------------------EH--- 447
            G CK   V +A  LL +   + L  D  T+T L+                    EH   
Sbjct: 367 HGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQV 426

Query: 448 -------------LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                        LK     +A+ LF  M+K+GL+ DI  Y  ++   C+  K+ ++ K 
Sbjct: 427 PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKL 486

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
               +  GL     TY  MI G  R+G +  A +  ++M + GC P+  +Y   + GL +
Sbjct: 487 LSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR 546

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           +  +  + ++ + M  KG  P + T   L   +
Sbjct: 547 KYDIARSRKYLQIMKDKGF-PVDATTAELLIRF 578



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 5/299 (1%)

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T  + I+ LC    T   F + L L+     +P + T   +++G C E  +N A  L
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAV-LGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWL 167

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
           +E+M+  G   N  TY +L+ G CK+G+   A + +  M K    PN+  YNAI+DGLCK
Sbjct: 168 VEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCK 227

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ-AETKQALGLFCRMV-KAGLNPDI 472
           +G V EA  LL +     ++ + +TY  L+     +    ++ +GLF  MV + G+ PD+
Sbjct: 228 RGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDV 287

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             ++ L+  FC++  +  +E      +  G+ P   TY S+I GY     +  A++ F  
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347

Query: 533 MNQ--IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           M +   GC P  +T+ +LI G CK  ++D+A      M+GKG+ P   T  +L   +C+
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCE 406



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 164/382 (42%), Gaps = 47/382 (12%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           V   ++    + G + E   ++ EM   N  P + +    + G+  E G       +F+E
Sbjct: 217 VYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNE 276

Query: 214 MCA-RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           M A +G+  D  ++ ++V  +C+ G +  A+  +  M+  G   +  T   LI  +C   
Sbjct: 277 MVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYC--- 333

Query: 273 FRGSIKQAFELLEEMVRKGWK--PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
            R  +++A  +   MVR+G    P+V TH  LI G CK    +KA  L  ++V      P
Sbjct: 334 LRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV-GKGLDP 392

Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT--------------------- 369
           +V T+T++I G+C+ +K   A  L   MKE G +PN  T                     
Sbjct: 393 DVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLF 452

Query: 370 --------------YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
                         Y  ++ G CK+G    A  L+  +  +G   + Y YN +I GLC++
Sbjct: 453 RAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCRE 512

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G + +A ELL+K  +     +K +Y + +   L++ +  ++      M   G   D    
Sbjct: 513 GLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTA 572

Query: 476 TTLIAAFCRQKKMKESEKFFQE 497
             LI    R     E +K F+E
Sbjct: 573 ELLI----RFLSANEEDKSFKE 590



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 7/281 (2%)

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            + ++ LM K G  P +   N I++GLC +G V  A  L++K        +  TY  L++
Sbjct: 129 GFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVN 188

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
              K  +T  AL    +MVK  L P++  Y  ++   C++  + E+     E     + P
Sbjct: 189 GLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEP 248

Query: 506 TKETYTSMICGYLRD-GNISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQ 563
              TY  +I G   + G     V  F  M  + G  PD  T+  L+ G CK+  L  A  
Sbjct: 249 NVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAES 308

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-----LWIRTVNTLIRK 618
               M+  G+ P  VT  +L   YC +     AM +   + ++       + T N+LI  
Sbjct: 309 VVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHG 368

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            C  K V  A     +++GK  + D  +  +L     E  K
Sbjct: 369 WCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKK 409



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           D+      I   C  +K              GL PT  T  +++ G   +G+++ A+   
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
           ++M  +G   +  TYGAL++GLCK      A +  + M+ + + P  V    +    CK+
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 591 GDSATAMIILESL---DKKLWIRTVNTLIRKLCSE 622
           G    A+ +L  +   + +  + T N LI+ LC E
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGE 263



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 1/192 (0%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ-RELQADKITYTILLSEHLKQAETKQALG 458
           P I  +N +   + K      A  L+K      +  AD  T  I ++      +T     
Sbjct: 72  PCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFA 131

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M K GL P +    T++   C +  +  +    ++    G      TY +++ G  
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G+ S A++  ++M +    P+ + Y A++ GLCK+  + EA      M    + P  V
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251

Query: 579 TRVTLAYEYCKQ 590
           T   L    C +
Sbjct: 252 TYNCLIQGLCGE 263


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 203/431 (47%), Gaps = 7/431 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM + G+    +T N +V    + G    + E+F +     +  D S Y + V   C  G
Sbjct: 408 EMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAG 467

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           ++ EA ++L  ML++G          +I A+   GF  +  +A+++   M+  G  P+  
Sbjct: 468 QLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKI---MLMFGLVPSSS 524

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLE 356
           T + ++ GL KKG  ++A  L  K++  D   P N   +T ++ GY K      A  L  
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMI--DKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWY 582

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M+ +G+ P+   +++ I G  K G  E AY+    M K+G  PN + YN++I GLC  G
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++ EA +L ++  Q+ L  D  T  I+++   K+   K A   F  M   G+ PD   Y 
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
           TLI  +C+   M  +++F  +   +G  P   TY   I G+     IS AV     +  +
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P+ +TY  +++ +C    LD A      ++     P  VT   L   +CKQG    A
Sbjct: 763 GVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821

Query: 597 MIILESLDKKL 607
           +I  + L+K L
Sbjct: 822 LIWGQKLNKLL 832



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 230/529 (43%), Gaps = 42/529 (7%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           V  +  + +L  G      M  +G        N ++   C+ G +  AE +   M     
Sbjct: 256 VGDYGSVWKLLRG------MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCC 309

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------- 272
             D  +Y +++ AY   GR ++A  +L  M+  G      T + +ITAFC++G       
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369

Query: 273 -FRG------------------------SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            F G                         + QA  L EEM  KG  P+  T  +L+ G  
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNY 429

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G    ++ LF     S +  P+   Y   ++G C   +++ A   LE M E+G+ P+ 
Sbjct: 430 KYGKEADSYELFRDWSLS-SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             + S+I  + + G  + A+    +M   G  P+    ++++ GL KKGR+QEA +LL K
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + L  +K+ +T+LL  + K  +T  A  L+  M   G+ PD  A++  I    +   
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           ++E+ + F E    G  P    Y S+I G    G +  A+K  + M Q G  PD  T   
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           +I+G CK+ ++  A   +  M   G++P  VT  TL   YCK  D  +A   L  +    
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728

Query: 608 W---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           W   I T N  I+  CS +++  A     +L+      + V+   + NA
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA 777



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 37/512 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++++   GR  +    +  M  NG      T + ++   C  G V  A ++F+ +   G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  + + Y  ++  Y +   V +A+     M D+G   D AT  +L+      G      
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438

Query: 273 --FR------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             FR                        G + +A + LE+M+ KG  P+V     +I   
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            + G+ + A + + K++      P+  T ++M+ G  K+ ++  A  LL +M ++GL  N
Sbjct: 499 SRAGFEDNAHKAY-KIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVN 557

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              +T L+ G+ KVG+   A+ L   M   G  P+  A++A IDGL K G V+EAYE   
Sbjct: 558 KVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFS 617

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  ++    +   Y  L+       +  +AL L   M + GL PDI     +I  FC++ 
Sbjct: 618 EMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEG 677

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +MK +   F E    G+ P   TY ++I GY +  ++ SA ++  +M   G  PD  TY 
Sbjct: 678 RMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYN 737

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             I G C   K+  A    + +I  G+ P  VT  T+    C       AM++   L K 
Sbjct: 738 IRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLD-RAMVLTAKLLKM 796

Query: 607 LWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
            ++    T N L+   C +     A ++  KL
Sbjct: 797 AFVPNVVTTNVLLSHFCKQGMPEKALIWGQKL 828



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 199/458 (43%), Gaps = 42/458 (9%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+   M   GV   +S+  ++     R+G      + L  M+  G    N    ++I  F
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C KG+   ++ A  LL  M +   +P+VY + +LI+    +G T  A   FL L+  +  
Sbjct: 289 CQKGY---LRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALG-FLHLMIKNGC 344

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           KP++ T++ +I+ +C E  +  A  + E ++E GL PN   Y +L+ G+ K  +  +A  
Sbjct: 345 KPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANM 404

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L + M  +G  P+   +N ++ G  K G+  ++YEL +      L  D   Y + ++   
Sbjct: 405 LYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLC 464

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------------------ 484
              +  +A+     M++ G+ P + A+ ++IAA+ R                        
Sbjct: 465 WAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSS 524

Query: 485 -----------QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
                      + +++E+     + I  GL   K  +T ++ GY + G+ + A   +  M
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEM 584

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
              G  PD I + A I GL K   ++EA + +  M  KG  P      +L +  C  G  
Sbjct: 585 EARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKL 644

Query: 594 ATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
             A+ +   + +K     I T N +I   C E R+  A
Sbjct: 645 HEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSA 682



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 162/367 (44%), Gaps = 38/367 (10%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y+ +      ++ G+   E    +  +L RM+E G+ P+++  + L     +VG++   +
Sbjct: 204 YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVW 263

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L+  M ++G  P  + +N +I   C+KG ++ A  LL    +   + D   Y IL++ +
Sbjct: 264 KLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAY 323

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
             +  T  ALG    M+K G  P +  ++T+I AFC +  + E+ K F+     GL P  
Sbjct: 324 RIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL------------------- 548
             Y +++ GY +  ++  A   ++ M   G APD  T+  L                   
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443

Query: 549 ----------------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG- 591
                           ++GLC   +LDEA QF E M+ KG+ P  V   ++   Y + G 
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503

Query: 592 --DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
             ++  A  I+          T ++++  L  + R+  A    +K++ K   V++V+   
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTV 563

Query: 650 LKNACYE 656
           L +  ++
Sbjct: 564 LLDGYFK 570



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 5/221 (2%)

Query: 140 ATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
           A S +S   F   + V   ++      G+L E   +  EM   GL     T N ++   C
Sbjct: 615 AFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFC 674

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           + G ++ A + F EM   GV  D  +Y  ++  YC++  +  AD +L+ M   G   D  
Sbjct: 675 KEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDIT 734

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           T  + I  FC       I +A  +L+E++  G  PN  T+  +++ +C     ++A  L 
Sbjct: 735 TYNIRIQGFCSS---QKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLT 790

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
            KL++   + PNV T   ++S +CK+    +A +  +++ +
Sbjct: 791 AKLLKM-AFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLNK 830


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 199/389 (51%), Gaps = 6/389 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWL 246
             +L  VV + C  G V  A+E+ +EM ARGV     +Y  ++ A C + +  E  D  L
Sbjct: 182 VQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNA-CVVRKDREGVDEIL 240

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
             M   G +    T T+LI  +        I +A ++ EEM  +  + +VY +T +I   
Sbjct: 241 GLMEREGVVASLVTYTILIEWYASSE---RIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C+ G   +A  LF +++      PN  T+ A+ISG CK  +M  AE+LLE M+ +G+  N
Sbjct: 298 CRAGNVRRASALFDEMI-CRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
              + +++ G+CK G  + A+ L D+M ++G   +++ YN +  GLCK  R +EA  +L 
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLN 416

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
              ++ +  + +T    +  + ++    +       + K G+ P+I  Y TLI A+ + +
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNE 476

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           K+K++     E +  GL P   TYTS+I G      +  A+K F  M   G   +  TY 
Sbjct: 477 KVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYT 536

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISP 575
           A+ISGL K+ + DEA + Y+ M+  G+ P
Sbjct: 537 AIISGLSKEGRADEALKLYDEMMRMGLIP 565



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 195/393 (49%), Gaps = 7/393 (1%)

Query: 164 AEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
            E+GR KE   ++ EM   G+     T N ++         E  +E+   M   GV A  
Sbjct: 196 GEVGRAKE---LMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASL 252

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y +++  Y    R+ EA++    M +R   +D    T +I+  C  G   ++++A  L
Sbjct: 253 VTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAG---NVRRASAL 309

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            +EM+ +G  PN  T   LI G+CK G  E A  + L+ ++      NV  +  M+ GYC
Sbjct: 310 FDEMICRGIVPNTXTFGALISGVCKAGQMEAA-EILLEEMQCKGVDLNVVIFNTMMDGYC 368

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K   M+ A  L + M+ +G   +  TY  L  G CK+  +E A  ++++M ++G  PN+ 
Sbjct: 369 KRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVV 428

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
                I+  C++G + E    L+   +R +  + +TY  L+  + K  + KQA  L   M
Sbjct: 429 TCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEM 488

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           V+ GL PD+  YT+LI   C   K+ E+ K F E +  G+    +TYT++I G  ++G  
Sbjct: 489 VEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRA 548

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             A+K +  M ++G  PD+  + AL+  L K S
Sbjct: 549 DEALKLYDEMMRMGLIPDDRVFEALVGSLHKPS 581



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 194/401 (48%), Gaps = 5/401 (1%)

Query: 204 VEYAEEVFDEMCARG-VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
           VE     F  M   G V     S  ++V   CR G V  A   ++ M  RG +    T  
Sbjct: 162 VELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYN 221

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+ A   +  R  + +   L+E   R+G   ++ T+T+LI+         +A +++ ++
Sbjct: 222 TLLNACVVRKDREGVDEILGLME---REGVVASLVTYTILIEWYASSERIGEAEKVYEEM 278

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
               N + +V+ YT+MIS  C+   + RA  L + M  +G++PNT T+ +LI G CK G 
Sbjct: 279 CER-NVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQ 337

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A  L++ M  +G   N+  +N ++DG CK+G + EA+ L     ++  +AD  TY I
Sbjct: 338 MEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNI 397

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L S   K    ++A  +   MV+ G+ P++    T I  +C++  + E E+F +     G
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY ++I  Y ++  +  A      M + G  PD  TY +LI G C   K+DEA 
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEAL 517

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           + +  M+ KGI     T   +     K+G +  A+ + + +
Sbjct: 518 KLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEM 558



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +A   R+ E   +  EM    + +       ++   C  G V  A  +FDEM  RG
Sbjct: 258 LIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRG 317

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++   C+ G++  A+  L  M  +G  L+      ++  +C    RG + 
Sbjct: 318 IVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCK---RGMMD 374

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF L + M RKG++ +V+T+ +L  GLCK    E+A R+ L ++      PNV T    
Sbjct: 375 EAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRV-LNVMVEKGVAPNVVTCATF 433

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I  YC+E  +   E  L  ++++G++PN  TY +LI  + K    ++A+ L   M ++G 
Sbjct: 434 IEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGL 493

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+++ Y ++I G C   +V EA +L  +   + ++ +  TYT ++S   K+    +AL 
Sbjct: 494 LPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALK 553

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAF 482
           L+  M++ GL PD   +  L+ + 
Sbjct: 554 LYDEMMRMGLIPDDRVFEALVGSL 577



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 4/297 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N E    V   M+S     G ++   ++  EM   G+   T T   ++   C+ G +E A
Sbjct: 282 NVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAA 341

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E + +EM  +GV  +   +  M+  YC+ G + EA R    M  +G   D  T  +L + 
Sbjct: 342 EILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASG 401

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C K  R   ++A  +L  MV KG  PNV T    I+  C++G   +  R FL+ +    
Sbjct: 402 LC-KLHR--YEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPER-FLRNIEKRG 457

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
             PN+ TY  +I  Y K EK+ +A  L   M E+GLLP+  TYTSLI+G C V   + A 
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEAL 517

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            L + M  +G   N+  Y AII GL K+GR  EA +L  +  +  L  D   +  L+
Sbjct: 518 KLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV 574



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 5/325 (1%)

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C K   E   R F ++V S      V + T ++   C+  ++ RA+ L+  M  +G++P 
Sbjct: 159 CNK--VELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPT 216

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TY +L+       + E   +++ LM +EG   ++  Y  +I+      R+ EA ++ +
Sbjct: 217 VFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYE 276

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  +R ++ D   YT ++S + +    ++A  LF  M+  G+ P+   +  LI+  C+  
Sbjct: 277 EMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAG 336

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           +M+ +E   +E    G+      + +M+ GY + G +  A +    M + G   D  TY 
Sbjct: 337 QMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYN 396

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            L SGLCK  + +EA +    M+ KG++P  VT  T    YC++G+ A     L +++K+
Sbjct: 397 ILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKR 456

Query: 607 ---LWIRTVNTLIRKLCSEKRVGMA 628
                I T NTLI      ++V  A
Sbjct: 457 GVVPNIVTYNTLIDAYSKNEKVKQA 481



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 4/256 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S   + G+++    ++ EM   G+ L     N ++   C+ G+++ A  + D M  +G
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
             AD  +Y ++    C++ R  EA R L+ M+++G   +  T    I  +C +   G++ 
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQE---GNLA 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +    L  + ++G  PN+ T+  LID   K    ++A  L  ++V      P+V TYT++
Sbjct: 445 EPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEK-GLLPDVFTYTSL 503

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G C  +K++ A  L   M  +G+  N  TYT++I G  K G  + A  L D M + G 
Sbjct: 504 IHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGL 563

Query: 399 TPNIYAYNAIIDGLCK 414
            P+   + A++  L K
Sbjct: 564 IPDDRVFEALVGSLHK 579



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 9/214 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           + S   ++ R +E   ++  M   G+     T    + I C+ G +   E     +  RG
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++ AY +  +V +A    + M+++G + D  T T LI   C       + 
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGEC---IVDKVD 514

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  EM+ KG + NV T+T +I GL K+G  ++A +L+ +++R     P+   + A+
Sbjct: 515 EALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRM-GLIPDDRVFEAL 573

Query: 339 ISGYCKEE-----KMNRAEMLLERMKEQGLLPNT 367
           +    K       K N    L     +   LPNT
Sbjct: 574 VGSLHKPSSHAALKQNEYGELKINTSDTSSLPNT 607


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 206/414 (49%), Gaps = 21/414 (5%)

Query: 229 MVVAYCRMGRVTEADRWL--SAMLDRGAILD--NATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ AY   G V  A  W   +  ++ GA L   N+ L +L+          SIK A E  
Sbjct: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV-------NSIKLAEEFF 181

Query: 285 EEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            ++V++    P+V T+T +I G CK G  E A ++F  +      KPN+  Y  MI+G+C
Sbjct: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFC 237

Query: 344 KEEKMNRAEMLLERMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           K+  M  A ++ +RM   +  LPN  TYT+LI G+CK G  E A   M+ M   GC PN 
Sbjct: 238 KKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNE 297

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             YNA+I GLC  GRV EA  L+ K      + +  T+  +L       +  QA+G    
Sbjct: 298 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 357

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           +++A +NPD+ +Y  +I  FC+  K  E+    +E    GL PT  ++ ++    + +G 
Sbjct: 358 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 417

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLC-KQSKLDEACQFYESMIGKGISPCEVTRV 581
           +  A+   ++M Q+ C P+ ++Y  +I GLC  + ++ +     + MI  G +       
Sbjct: 418 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 477

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFF 632
            L   YC++G+    M I   +  K ++    + + L+++LC++ +V  A   F
Sbjct: 478 CLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLF 531



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 238/542 (43%), Gaps = 69/542 (12%)

Query: 46  PAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHLRSSPPRLNLQ-IDIDSLTHEQAITVV 104
           P  S T+ S  P QS++ T  + V++    Q     SP  ++ Q +D  SL     I V 
Sbjct: 4   PRRSLTNISQIPDQSILVTSITSVIQRLNPQ---NPSPKNISSQPLDQFSLCLGSNI-VT 59

Query: 105 ASLANEAGSMVALSFFYWA----IGFAKFRHFMRLY------------IVCATSLISNGN 148
             +  +     AL FF WA        K+ H    Y            I  A SL+ N N
Sbjct: 60  KVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN 119

Query: 149 --------------------------FERAHEVMQ--CMVSSFAEIGRL---------KE 171
                                     F +A ++    C+ S  + +G L         +E
Sbjct: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179

Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
            F  +++   N +P   ST   ++   C++G++E A++VFD M  +    +  +Y  M+ 
Sbjct: 180 FFHQIVK--ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234

Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDN-ATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
            +C+ G +  A      M+     L N  T T LI  +C K   G +++A + + EM+ +
Sbjct: 235 GFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKK---GELEEAKKCMNEMMNR 291

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G +PN  T+  +I GLC  G  ++A  L  K+ R + +K NV T+ +M+ G C   K ++
Sbjct: 292 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQ 350

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A   L  + E  + P+  +Y  +I G CK+G  + A  L+  M   G  P ++++NA+  
Sbjct: 351 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 410

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITY-TILLSEHLKQAETKQALGLFCRMVKAGLN 469
            L + G +  A  LLK+  Q +   + ++Y TI+    + +   +    L  RM+++G N
Sbjct: 411 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 470

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            D   Y+ L+  +C +  ++   +   E +T       E+++ ++      G ++ A K 
Sbjct: 471 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKL 530

Query: 530 FQ 531
           F 
Sbjct: 531 FD 532



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           + +I  Y   GN+ +A+ +F +  QI       +Y +L+  L + + +  A +F+  ++ 
Sbjct: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186

Query: 571 KGISPCEV-TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAA 629
           + + P +V T  T+   YCK G    A  + + +  K  +   NT+I   C +  +  A 
Sbjct: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGDMESAR 246

Query: 630 LFFHKLL-GKDQNVDRVSLAAL 650
           L F +++ G+D   + V+   L
Sbjct: 247 LVFDRMMSGEDCLPNHVTYTTL 268


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 201/400 (50%), Gaps = 10/400 (2%)

Query: 179 MTNNGLPLITSTLNR---VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           M   G  ++T T++    ++G  C  G ++        +  +G   +   +  ++   C 
Sbjct: 78  MARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCA 137

Query: 236 MGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK- 293
             R  +A D  L  M + G + +  + T+++   C +      ++A ELL  M   G   
Sbjct: 138 DKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHEN---RSQEALELLHMMADDGGGC 194

Query: 294 -PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PNV +++ + DGL K G  +KA+  + +++      PNV TY+++I+  CK + M++A 
Sbjct: 195 LPNVVSYSTVTDGLLKGGDPDKAYATYREML-DRRILPNVVTYSSIIAALCKGQAMDKAM 253

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            + +RM + G+ PN  TYTSL++G C  G    A   ++ M   G  PN+  Y++ +D L
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK GR  EA ++     +R L+ D  TY+ LL  +  +    +  GLF  MV++ + PD 
Sbjct: 314 CKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + + TLI A  +Q K+ E+   F +    GL P   TY ++I GY +   + +A+  FQ 
Sbjct: 374 YVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQE 433

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           M   G +P+ ITY  ++ GL +  +   A +FY  +I  G
Sbjct: 434 MVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 12/393 (3%)

Query: 211 FDEMCARG---VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           F+ M   G   V     +Y +++   C  GR+      L  ++ +G  ++      L+  
Sbjct: 75  FNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKG 134

Query: 268 FC-DKGFRGSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            C DK        A ++ L  M   G  PNV++HT+++ GLC +  +++A  L L ++  
Sbjct: 135 LCADK----RTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALEL-LHMMAD 189

Query: 326 DNYK--PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           D     PNV +Y+ +  G  K    ++A      M ++ +LPN  TY+S+I   CK    
Sbjct: 190 DGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAM 249

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ++A ++ D M K G TPN + Y +++ G C  G++ EA + L+K     ++ + +TY+  
Sbjct: 250 DKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSF 309

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K     +A  +F  MVK GL PDI  Y++L+  +  +  + E    F   + + +
Sbjct: 310 MDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDM 369

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P    + ++I    + G +  A+  F +M   G  P+ +TY  LI+G CK ++++ A  
Sbjct: 370 QPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALA 429

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
            ++ M+  G+SP  +T   +     + G + TA
Sbjct: 430 LFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTA 462



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 197/443 (44%), Gaps = 12/443 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G  E A +VFDE+  RG+ A   S    +    R        R+ + M   GA +   T+
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRF-NRMARAGASMVTPTV 90

Query: 262 ---TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
               +LI   C  G    +   F  L  +V+KG++        L+ GLC    T+ A  +
Sbjct: 91  HTYGILIGCCCSAG---RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG--LLPNTNTYTSLIYG 376
            L+ +      PNV ++T ++ G C E +   A  LL  M + G   LPN  +Y+++  G
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDG 207

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
             K G+ ++AY     M      PN+  Y++II  LCK   + +A E+  +  +  +  +
Sbjct: 208 LLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             TYT L+       +  +A+    +M   G+ P++  Y++ +   C+  +  E+ K F 
Sbjct: 268 CFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFY 327

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
             +  GL P   TY+S++ GY  +G +      F  M Q    PD+  +  LI    KQ 
Sbjct: 328 SMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
           K+DEA   +  M  +G+ P  VT  TL   YCK      A+ + + +          T N
Sbjct: 388 KVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYN 447

Query: 614 TLIRKLCSEKRVGMAALFFHKLL 636
            +++ L    R G A  F+ +++
Sbjct: 448 IMLQGLFRTGRTGTAKEFYVQII 470



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 4/204 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F   G+L E    + +M +NG+     T +  +   C+ G    A ++F  M  RG
Sbjct: 274 LVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRG 333

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D ++Y  ++  Y   G + E       M+      D+     LI A      +G + 
Sbjct: 334 LKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYA---SAKQGKVD 390

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  +M  +G KPN  T+  LI+G CK    E A  LF ++V S+   PN  TY  M
Sbjct: 391 EAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMV-SNGVSPNFITYNIM 449

Query: 339 ISGYCKEEKMNRAEMLLERMKEQG 362
           + G  +  +   A+    ++ + G
Sbjct: 450 LQGLFRTGRTGTAKEFYVQIIKSG 473



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 52/112 (46%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
            L+   + +  H V   ++ + A+ G++ E   +  +M + GL     T N ++   C++
Sbjct: 362 DLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKI 421

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
             +E A  +F EM + GV  +  +Y +M+    R GR   A  +   ++  G
Sbjct: 422 TRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 178/377 (47%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G       +   +   G+  +   Y  ++   C+ G V  A      M   G + + 
Sbjct: 169 CEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNP 228

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T ++L+  F  +G +   ++ F++ E M R G  PN Y +  LI   C  G  +KAF++
Sbjct: 229 HTYSVLMNGFFKQGLQ---REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R       V TY  +I G C+ +K   A  L+ ++ + GL PN  TY  LI G C
Sbjct: 286 FAEM-REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            VG  + A  L + +   G +P +  YN +I G  K   +  A +L+K+  +R +   K+
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL+    +   T++A  +   M K+GL PD++ Y+ LI   C    MKE+ K F+  
Sbjct: 405 TYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSL 464

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P    Y +MI GY ++G+   A++    M   G  P+  ++ + I  LC+  K 
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKW 524

Query: 559 DEACQFYESMIGKGISP 575
            EA      MI  G+ P
Sbjct: 525 KEAELLLGQMINSGLKP 541



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 195/408 (47%), Gaps = 9/408 (2%)

Query: 234 CRMGRVTEADR--WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
           C + R    D+  W+   L    +LD  +  ++I   C+ G+     + F LL  +   G
Sbjct: 132 CLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGY---FVKGFRLLAMLEEFG 188

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV  +T LIDG CK G    A  LF K+ R     PN HTY+ +++G+ K+      
Sbjct: 189 LSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRL-GLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             + E MK  G++PN   Y  LI  +C  G  ++A+ +   M ++G    +  YN +I G
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LC+  +  EA +L+ K  +  L  + +TY IL++      +   A+ LF ++  +GL+P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y TLIA + + + +  +    +E     + P+K TYT +I  + R      A +   
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M + G  PD  TY  LI GLC    + EA + ++S+    + P  V   T+ + YCK+G
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487

Query: 592 DSATAMIILESLDKKLWIRTVNTL---IRKLCSEKRVGMAALFFHKLL 636
            S  A+ +L  +     +  V +    I  LC +++   A L   +++
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMI 535



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 193/400 (48%), Gaps = 8/400 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  +V AY       +A  +L  M+  G +  + T   L+       +     +A+ +  
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNY---FDKAWWIFN 148

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+  K    + Y+  ++I G C+ G+  K FRL L ++      PNV  YT +I G CK 
Sbjct: 149 ELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRL-LAMLEEFGLSPNVVIYTTLIDGCCKY 206

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A+ L  +M   GL+PN +TY+ L+ G  K G     + + + M + G  PN YAY
Sbjct: 207 GNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I   C  G V +A+++  +  ++ +    +TY IL+    +  +  +A+ L  ++ K
Sbjct: 267 NCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL+P+I  Y  LI  FC   KM  + + F +  ++GL PT  TY ++I GY +  N++ 
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+   + M +   AP  +TY  LI    + +  ++AC+ +  M   G+ P   T   L +
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIH 446

Query: 586 EYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSE 622
             C  G+   A  + +SL +  L   +V  NT+I   C E
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 166/310 (53%), Gaps = 6/310 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           GL     ++++ M   G+  +A +Y  ++  YC  G V +A +  + M ++G      T 
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 262 TLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            +LI   C    RG    +A +L+ ++ + G  PN+ T+ +LI+G C  G  + A RLF 
Sbjct: 302 NILIGGLC----RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +L +S    P + TY  +I+GY K E +  A  L++ M+E+ + P+  TYT LI    ++
Sbjct: 358 QL-KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              E+A ++  LM K G  P++Y Y+ +I GLC  G ++EA +L K   +  LQ + + Y
Sbjct: 417 NYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             ++  + K+  + +AL L   MV +G+ P++ ++ + I   CR +K KE+E    + I 
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536

Query: 501 AGLFPTKETY 510
           +GL P+   Y
Sbjct: 537 SGLKPSVSLY 546



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 33/317 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G  +EGF M   M  +G+       N ++   C  G+V+ A +VF EM  +G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG 293

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-- 276
           +     +Y +++   CR  +  EA + +  +   G   +  T  +LI  FCD G   +  
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 277 ------------------------------IKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                         +  A +L++EM  +   P+  T+T+LID  
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            +  +TEKA  +   L+      P+V+TY+ +I G C    M  A  L + + E  L PN
Sbjct: 414 ARLNYTEKACEMH-SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           +  Y ++I+G+CK G+  RA  L++ M   G  PN+ ++ + I  LC+  + +EA  LL 
Sbjct: 473 SVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLG 532

Query: 427 KAFQRELQADKITYTIL 443
           +     L+     Y ++
Sbjct: 533 QMINSGLKPSVSLYKMV 549


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 207/429 (48%), Gaps = 35/429 (8%)

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE------- 286
           CR G+  E+  +L  M+D+G   D    T LI  F +    G   +  E+LE        
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVF 139

Query: 287 ------------------------MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
                                   M  +G+ P+V T+ ++I   C +G  + A  +F +L
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           ++ DN +P V TYT +I     +  ++ A  LL+ M  +GL P+T TY ++I G CK   
Sbjct: 200 LK-DNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            ++A++L+  +   GC P+I  YN ++  L  +G+  E  +L+ +      + + +T++I
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+    +  + ++A+ L   M + GL PD + Y  LIA FCR+ ++  + +F +  I+ G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    Y +++ G  R G    A++ F++++++GC P+  +Y  L S L        A 
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNTLIRKL 619
           +    ++ +GI P E+T  +L    C+ G  D A  +++ ++S   +  + + N ++  L
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498

Query: 620 CSEKRVGMA 628
           C   R   A
Sbjct: 499 CKVNRANDA 507



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 195/400 (48%), Gaps = 4/400 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +E A  V D M +RG   D  +Y +M+ ++C  G++  A      +L         T T+
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI A       G I  A +LL+EM+ KG +P+  T+  +I G+CK+   +KAF L L+ +
Sbjct: 214 LIEATI---LDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL-LRSL 269

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            S   KP++ TY  ++       K +  E L+  M   G  PN  T++ LI   C+ G  
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKV 329

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E A +L+  M ++G  P+ Y Y+ +I G C++GR+  A E L+         D + Y  +
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           ++   +  +  QAL +F ++ + G  P++ +Y TL +A         + +   + +  G+
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P + TY S+I    RDG +  A++    M      P+ ++Y  ++ GLCK ++ ++A +
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIE 509

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
              +M  KG  P E T + L       G  A AM +  SL
Sbjct: 510 VLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 177/379 (46%), Gaps = 5/379 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   ++   LE MV KG+ P+V   T LI G        KA R+   L R    KP+V  
Sbjct: 83  GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG--KPDVFA 140

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+ISG+ K  ++  A  +L+RMK +G LP+  TY  +I   C  G  + A ++ + + 
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           K+ C P +  Y  +I+     G +  A +LL +   + L+ D +TY  ++    K+    
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A  L   +   G  PDI  Y  L+     + K  E EK   E I+ G  P   T++ +I
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               RDG +  AV   + M + G  PD   Y  LI+G C++ +LD A +F E MI  G  
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALF 631
           P  V   T+    C+ G +  A+ + E LD+      + + NTL   L S      A   
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEM 440

Query: 632 FHKLLGKDQNVDRVSLAAL 650
             KLL +  + D ++  +L
Sbjct: 441 ILKLLNQGIDPDEITYNSL 459



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 200/412 (48%), Gaps = 4/412 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F +  +L+    ++  M + G      T N ++G  C  G ++ A E+F+E+    
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y +++ A    G +  A + L  ML +G   D  T   +I   C +     + 
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM---VD 260

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AFELL  +  +G KP++ T+ +L+  L  +G   +  +L  +++ S   KPNV T++ +
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI-SIGCKPNVVTHSIL 319

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C++ K+  A  LL  MKE+GL P+   Y  LI G C+ G  + A + ++ M  +GC
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN I+ GLC+ G+  +A E+ +K  +     +  +Y  L S      +  +AL 
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +  +++  G++PD   Y +LI+  CR   + E+ +   +  +    P   +Y  ++ G  
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
           +    + A++    M + GC P+  TY  LI G+       EA +   S+ G
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHG 551



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 4/189 (2%)

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           LL+   +  +  ++L     MV  G  PD+   T LI  F   + + ++ +  +     G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             P    Y ++I G+++   + +A +   RM   G  PD +TY  +I   C + KLD A 
Sbjct: 135 K-PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKLWIRTV--NTLIRKL 619
           + +E ++     P  +T   L       G    AM +L E L K L   T+  N +IR +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 620 CSEKRVGMA 628
           C E  V  A
Sbjct: 254 CKEMMVDKA 262


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 213/457 (46%), Gaps = 45/457 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ + A+I    + FS+  +M   GL     TLN ++   C +  V         +  RG
Sbjct: 97  LLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRG 156

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  +Y  ++   C   R++EA R    M   G   +  T   LI   C  G   +I 
Sbjct: 157 YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG---NIN 213

Query: 279 QAFELLEEMVRK------GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            A +L +EM+          KPN++++ ++ID LCK G  ++A RLF ++V     +P+V
Sbjct: 214 LALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV-DQGVRPDV 272

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T++A+I   CKE  +  A+  LE M  +G++P+  T+TSLI G C VG+ + A +L   
Sbjct: 273 VTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLS 332

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL---K 449
           M  +G  P++ +Y  +I G CK   V+EA +L  +  +     D  T+ +LL       K
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 450 QAETKQALG--------------------------------LFCRMVKAGLNPDIHAYTT 477
             + K+  G                                LF  +    +  DI ++  
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI   C+ +K++ + + F++    GL P   TY  MI G+ ++G + +A   FQ M + G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           C P+ +TY AL+ G  K +KL+E  +    MI K +S
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 549



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 209/443 (47%), Gaps = 34/443 (7%)

Query: 229 MVVAYCRMGRVT--EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK---QAFEL 283
           M +  C+ G +T  +A ++   M+ R  I    +  LL+ A         IK   Q F L
Sbjct: 65  MFIHNCKKGNITSTQALQFFDLMM-RSII----SFNLLLGAL------AKIKHYSQVFSL 113

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            ++M   G  PN +T  +LI+ LC      +       ++R   Y P+V TYT++I G C
Sbjct: 114 YKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRR-GYIPDVVTYTSLIKGLC 172

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------G 397
            E +++ A  L  RM++ G  PN  TY +LI G C+ GN   A  L   M          
Sbjct: 173 MEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAIN 232

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PNI++YN IID LCK G+ +EA  L  +   + ++ D +T++ L+    K+    +A 
Sbjct: 233 CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
                M+  G+ PD+  +T+LI  FC    +  +++ F    + G  P   +YT +I GY
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGY 352

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM----IGKGI 573
            +  N+  A+K +  M ++G  PD  T+  L+ GL    K+ +A + +  +    + K +
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNL 412

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAAL 630
             C V    L    CK G    AM +   L+S + KL I + N LI  LC  +++  A  
Sbjct: 413 YICSVFLDGL----CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWE 468

Query: 631 FFHKLLGKDQNVDRVSLAALKNA 653
            F KL  +    D V+   + N 
Sbjct: 469 LFEKLSQEGLQPDVVTYCIMING 491



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 175/359 (48%), Gaps = 10/359 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS------TLNRVVGIACELGLVEYAEEVFD 212
           ++      G +     +  EM N   P   +      + N ++   C++G  + A+ +F+
Sbjct: 202 LIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFN 261

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           EM  +GV  D  ++  ++   C+ G V EA ++L  M+ RG + D  T T LI  FC   
Sbjct: 262 EMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFC--- 318

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G +  A EL   M  KG++P+V ++TVLI G CK    E+A +L+ +++R   + P++
Sbjct: 319 LVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW-PDM 377

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T+  ++ G     K+  A+ L   +K   +  N    +  + G CK G    A +L + 
Sbjct: 378 KTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNE 437

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           +       +I ++N +IDGLCK  +++ A+EL +K  Q  LQ D +TY I+++   K  +
Sbjct: 438 LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQ 497

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              A  LF  M + G  P++  Y+ L+  F +  K++E  K   + I   +      YT
Sbjct: 498 VDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 39/339 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    +IG+ KE   +  EM + G+     T + ++   C+ G+V  A++  + M  RG
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  ++  ++  +C +G +  A     +M  +G   D  + T+LI  +C K F  +++
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC-KTF--NVE 359

Query: 279 QAFELLEEMVRKG-W-----------------------------KP-----NVYTHTVLI 303
           +A +L  EM+R G W                             KP     N+Y  +V +
Sbjct: 360 EAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFL 419

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DGLCK G   +A  LF +L +S N K ++ ++  +I G CK  K+  A  L E++ ++GL
Sbjct: 420 DGLCKNGCLFEAMELFNEL-KSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TY  +I G CK G  + A  L  +M + GCTPN+  Y+A++ G  K  +++E  +
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVK 538

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
           LL K  Q+++      YTI+     K  + ++ L +  R
Sbjct: 539 LLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQR 577


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 189/367 (51%), Gaps = 7/367 (1%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
           +F +    G+  D  +  +++  +C    +T A    + +L RG   D  TL  LI   C
Sbjct: 80  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLC 139

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
              FRG IK+     +++V +G++ +  ++  LI+GLCK G T+   RL  KL    + K
Sbjct: 140 ---FRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVK 195

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  Y  +I+  CK + +  A  +   M  +G+ P+  TYT+LI+G C +G  + A+ L
Sbjct: 196 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSL 255

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGR---VQEAYELLKKAFQRELQADKITYTILLSE 446
           ++ M  +   P++Y ++ +ID L K+G+   V EA  L ++   + +  D +TY  L+  
Sbjct: 256 LNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 315

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K    ++A+ L   M + G+ PD+++YT L+   C+  +++ +++FFQ  +  G    
Sbjct: 316 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLN 375

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
              Y  MI G  + G    A+    +M   GC P+ IT+  +I  L ++ + D+A +   
Sbjct: 376 VWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILR 435

Query: 567 SMIGKGI 573
            MI +G+
Sbjct: 436 EMIARGL 442



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 7/352 (1%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +  +++ F     +   FS+   +   G      TLN ++   C  G ++      D++ 
Sbjct: 96  LSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVV 155

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           A+G   D  SY  ++   C+ G      R L  +       D      +I + C     G
Sbjct: 156 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 215

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
               A ++  EM+ KG  P+V T+T LI G C  G  ++AF L L  ++  N  P+V+T+
Sbjct: 216 D---ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSL-LNEMKLKNINPDVYTF 271

Query: 336 TAMISGYCKEEK---MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           + +I    KE K   ++ A  L E MK + ++P+  TY SLI G CK  + ERA  L+  
Sbjct: 272 SVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P++Y+Y  ++DGLCK GR++ A E  +    +    +   Y ++++   K   
Sbjct: 332 MKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGL 391

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
             +A+ L  +M   G  P+   + T+I A   + +  ++EK  +E I  GL 
Sbjct: 392 FGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLL 443



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 169/354 (47%), Gaps = 7/354 (1%)

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
           G   D  TL++LI  FC    +  I  AF +   ++++G+ P+  T   LI GLC +G  
Sbjct: 88  GITPDLCTLSILINCFCH---QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEI 144

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           +K    F   V +  ++ +  +Y  +I+G CK  +      LL +++   + P+   Y +
Sbjct: 145 KKTLY-FHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNT 203

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I   CK      A D+   M  +G +P++  Y  +I G C  G+++EA+ LL +   + 
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN 263

Query: 433 LQADKITYTILLSEHLKQAETK---QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  D  T+++L+    K+ + K   +A+ LF  M    + PDI  Y +LI   C+   ++
Sbjct: 264 INPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 323

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            +    +E    G+ P   +YT ++ G  + G +  A ++FQ +   GC  +   Y  +I
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMI 383

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           +GLCK     EA      M GKG  P  +T  T+     ++ ++  A  IL  +
Sbjct: 384 NGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 7/352 (1%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P    +  ++S   K ++      L ++ +  G+ P+  T + LI   C   +   A+ +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              + K G  P+    N +I GLC +G +++      +   +  Q D+++Y  L++   K
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             ETK    L  ++    + PD+  Y T+I + C+ K + ++   + E I  G+ P   T
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK---LDEACQFYE 566
           YT++I G+   G +  A      M      PD  T+  LI  L K+ K   +DEA   +E
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            M  K + P  VT  +L    CK      A+ +L+ + +   +  + +   L+  LC   
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
           R+ +A  FF  LL K  +++      + N   ++  +    DL  ++ EG G
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKM-EGKG 406



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 13/282 (4%)

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
           Y H  V +F    +LM LM      P  + +N I+  L K  R      L K+     + 
Sbjct: 38  YHHHAVASF----NLMLLMRPP---PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGIT 90

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D  T +IL++    QA    A  +F  ++K G +PD     TLI   C + ++K++  F
Sbjct: 91  PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYF 150

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             + +  G    + +Y ++I G  + G   +  +  +++      PD + Y  +I+ LCK
Sbjct: 151 HDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 210

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
              L +AC  Y  MI KGISP  VT  TL + +C  G    A  +L  +  K     + T
Sbjct: 211 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYT 270

Query: 612 VNTLIRKLCSE---KRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            + LI  L  E   K V  A   F ++  K+   D V+  +L
Sbjct: 271 FSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 3/215 (1%)

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T T+    H +      A+  F  M+     P    +  ++++  + K+       F++ 
Sbjct: 25  TATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF 84

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G+ P   T + +I  +    +I+ A   F  + + G  PD IT   LI GLC + ++
Sbjct: 85  EPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEI 144

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTL 615
            +   F++ ++ +G    +V+  TL    CK G++     +L  L+    K  +   NT+
Sbjct: 145 KKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTI 204

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           I  LC  K +G A   + +++ K  + D V+   L
Sbjct: 205 INSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 239


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 227/477 (47%), Gaps = 10/477 (2%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G V  A +VF EM ARG     + +  M++ +C  G V      L  M     I D  + 
Sbjct: 189 GEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSY 248

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
            +LI  +   G  G    AF+LL+EM   G +P V T+ +L++ LC  G    A RLF +
Sbjct: 249 NILIKGYSVFGQAG---DAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDE 305

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +V+    + N  T+  ++ GY K  +M+ A      MK +GL+P+  T+  L  G  K G
Sbjct: 306 MVKV-GIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFG 364

Query: 382 N-FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
              + A+   +L    G   +  + + ++  LC  GR+ +A++L+  A ++ +      +
Sbjct: 365 KAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGF 424

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             L++ + K+   +QAL ++  M K GL P    +  LI   C Q ++ +++   +  I 
Sbjct: 425 NALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMIC 484

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G +    ++T  +  Y R GN+  A+K +  M ++G  PD I + A ISGLC+   ++E
Sbjct: 485 KG-YCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNE 543

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIR 617
           A Q +  M G+G  P  +T  +L   +C+ G  + A+ + + + +   I  V   N LI 
Sbjct: 544 AYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILID 603

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEG 673
             C E R+ M    F  +       D V+   + NA C   +  +    +++ +A+G
Sbjct: 604 GFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADG 660



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 230/517 (44%), Gaps = 40/517 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  ++  G+  + F ++ EM  +G      T N +V + C  G +  A  +FDEM   G
Sbjct: 251 LIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVG 310

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL-------------- 264
           + A+  ++ ++V  Y + GR+ EA      M  RG + D  T  +L              
Sbjct: 311 IEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLA 370

Query: 265 -------------ITA------FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
                        I+A       C   + G +  A++L+   + +G   +V     L+  
Sbjct: 371 HGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAA 430

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
             K+G+ E+A  ++  ++      P+  T+  +I G C + +++ A++LLE M  +G   
Sbjct: 431 YSKEGFDEQALEVY-SVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCV 489

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
            T ++T  +  + + GN E A    D M K G  P+  A++A I GLC+   V EAY+  
Sbjct: 490 GT-SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAF 548

Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
            +   R    + ITY  L+S   +     +AL L  +M ++GL PD+     LI  FC++
Sbjct: 549 VEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKE 608

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            ++    K F +   +GL P   TY ++I  Y    ++SSA+ +  +M   GC PD  TY
Sbjct: 609 GRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTY 668

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
              +  LC    L+ A +  + ++  G  P  VT  TL    C       AMI+   L K
Sbjct: 669 NIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDVLD-RAMILTGKLIK 727

Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
             +     TVN      C +   G  AL + + L +D
Sbjct: 728 MAFQPNTVTVNVFFSHFCKQG-FGKRALVWAEKLKED 763



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 224/510 (43%), Gaps = 44/510 (8%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G ++  + + +EMT  G     +  N ++   C  GLV     +   M    V  DA SY
Sbjct: 189 GEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSY 248

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
            +++  Y   G+  +A + L  M + G      T  +L+   C     G++  A  L +E
Sbjct: 249 NILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHD---GNMVDARRLFDE 305

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG----- 341
           MV+ G + N  T  VL+DG  K G  ++A+    + +++    P+  T+  + +G     
Sbjct: 306 MVKVGIEANTITFNVLVDGYAKAGRMDEAYAA-CREMKARGLVPDCCTFNILSAGAYKFG 364

Query: 342 -------------------------------YCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
                                           C + +++ A  L+    EQG+  +   +
Sbjct: 365 KAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGF 424

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
            +L+  + K G  E+A ++  +M K G  P+   +N +I GLC +GR+ +A  LL+    
Sbjct: 425 NALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMIC 484

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           +       ++TI +  + +    + AL  +  MVK G+ PD  A++  I+  CR   + E
Sbjct: 485 KGYCVGT-SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNE 543

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           + + F E    G  P   TY S+I  + R G +S A+K  ++M Q G  PD  T   LI 
Sbjct: 544 AYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILID 603

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KL 607
           G CK+ +LD   + +  M   G++P  VT  T+   YC   D ++AMI +  +     + 
Sbjct: 604 GFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEP 663

Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            I T N  +  LC+   +  A     +L+ 
Sbjct: 664 DIFTYNIWMHSLCNNHLLNRAVKMLDELVA 693



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A  +L  +   G  P++     L+  L + G    A+++F+++  +   +P++  
Sbjct: 154 GMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMT-ARGPRPSLAI 212

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           + AMI G+C    ++    LL  M    ++P+  +Y  LI G+   G    A+ L+D M 
Sbjct: 213 FNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMR 272

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + GC P +  YN +++ LC  G + +A  L  +  +  ++A+ IT+ +L+  + K     
Sbjct: 273 ESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMD 332

Query: 455 QALGLFCRMVKA-GLNPDIHAYTTLIAA-------------------------------- 481
           +A    CR +KA GL PD   +  L A                                 
Sbjct: 333 EAYAA-CREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDM 391

Query: 482 ----FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
                C   ++ ++ K    AI  G+  +   + +++  Y ++G    A++ +  MN+IG
Sbjct: 392 VVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIG 451

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE-YCKQGDSATA 596
             P + T+  LI GLC Q +LD+A    E MI KG   C  T  T+  + Y + G+   A
Sbjct: 452 LVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGY--CVGTSFTIYMDSYFRSGNVEGA 509

Query: 597 M 597
           +
Sbjct: 510 L 510



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 38/289 (13%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G VE A + +D+M   GV  D  ++   +   CR+  V EA +    M  RG + +N T 
Sbjct: 504 GNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITY 563

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             LI+AFC  G+   + +A +L ++M + G  P+V+T  +LIDG CK+G  +   + FL 
Sbjct: 564 NSLISAFCRVGY---VSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLD 620

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +  S    P+V TY  +I+ YC  + M+ A + + +M   G  P+  TY   ++  C   
Sbjct: 621 MYNS-GLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNH 679

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDG------------------------------ 411
              RA  ++D +   GC PN   YN ++DG                              
Sbjct: 680 LLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDVLDRAMILTGKLIKMAFQPNTVTVNV 739

Query: 412 ----LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
                CK+G  + A    +K  +  +  D  T  IL   + +  +  QA
Sbjct: 740 FFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAYKEMEDDSQA 788



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 5/219 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S+F  +G + E   +  +M  +GL     T N ++   C+ G ++   + F +M   G
Sbjct: 566 LISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSG 625

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++ AYC    ++ A  +++ ML  G   D  T  + + + C+      + 
Sbjct: 626 LTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHL---LN 682

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L+E+V  G  PN  T+  L+DG+C     ++A  L  KL++   ++PN  T    
Sbjct: 683 RAVKMLDELVAMGCMPNSVTYNTLMDGICSD-VLDRAMILTGKLIKM-AFQPNTVTVNVF 740

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
            S +CK+    RA +  E++KE  +  +  T   L + +
Sbjct: 741 FSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAY 779


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 10/407 (2%)

Query: 247 SAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
           S ML RG      T T+L+ A C     G   +A  +L+EM  KG  PN+ T+ V+I+G+
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFG---EAMNVLDEMRAKGCTPNIVTYNVIINGM 232

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           C++G  + A  +  +L  S  ++P++ +YT ++ G C   + +  ++L   M ++  +PN
Sbjct: 233 CREGRVDDAKEILNRL-SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             T+  L+   C+ G  ERA  ++  M + GCTPN    N +I+ +CK+GRV +AY+ L 
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
                    D I+YT +L    +    + A  L   MV+    P+   + T I   C++ 
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            ++++ K  +     G      TY +++ G+   G + SA++ F   N + C P+ ITY 
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYT 468

Query: 547 ALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK- 605
            L++GLC   +LD A +    MI K      VT   L   +C++G    AM ++  + + 
Sbjct: 469 TLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 528

Query: 606 --KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                + T NTL+  +  +     A    H L+ K  ++D ++ +++
Sbjct: 529 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSV 575



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 7/368 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F   G ++    ++ +M+ +G    T+  N V+   C+ G V+ A +  + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              D  SY  ++   CR GR   A   L  M+ +    +  T    I   C KG    I+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL---IE 414

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L+E M   G    + T+  L+ G C +G  + A  LF  L      +PN  TYT +
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTL 470

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ++G C  E+++ A  LL  M ++    N  T+  L+   C+ G  E A +L++ M + GC
Sbjct: 471 LTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 530

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+  +N ++DG+ K    +EA ELL     + +  D ITY+ ++    ++  T++A+ 
Sbjct: 531 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 590

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   +   G+ P +  Y  ++ A C++ +  ++  FF   ++ G  P + TY  +I G  
Sbjct: 591 MLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLA 650

Query: 519 RDGNISSA 526
            +G +  A
Sbjct: 651 HEGLLKEA 658



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 203/427 (47%), Gaps = 7/427 (1%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E  +++ EM   G      T N ++   C  G V+ A+E+ + + + G   D  SY  ++
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 264

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              C   R  +     + M+D+  + +  T  +L+  FC  G    +++A ++L++M + 
Sbjct: 265 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM---VERAIQVLQQMSQH 321

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PN     ++I+ +CK+G  + A+  FL  +      P+  +YT ++ G C+  +   
Sbjct: 322 GCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 380

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ LL  M  +   PN  T+ + I   C+ G  E+A  L++LM + GC+  I  YNA++ 
Sbjct: 381 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 440

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G C +GRV  A EL         + + ITYT LL+          A  L   M++     
Sbjct: 441 GFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPL 497

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           +   +  L++ FC++  ++E+ +   + +  G  P   T+ +++ G  +D N   A++  
Sbjct: 498 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 557

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             +   G + D ITY +++  L ++ + +EA Q   ++   G+ P       + +  CK+
Sbjct: 558 HGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR 617

Query: 591 GDSATAM 597
            ++  A+
Sbjct: 618 CETDQAI 624



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 183/384 (47%), Gaps = 7/384 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T + +V   C  G+VE A +V  +M   G   + +   +++ A C+ GRV +A  +L+ M
Sbjct: 294 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
              G   D  + T ++   C  G     + A ELL EMVRK   PN  T    I  LC+K
Sbjct: 354 GMYGCNPDTISYTTVLRGLCRAG---RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E+A +L ++L+        + TY A++ G+C + +++ A   LE        PNT T
Sbjct: 411 GLIEQAIKL-IELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTIT 466

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           YT+L+ G C     + A +L+  M ++ C  N   +N ++   C+KG V+EA EL+ +  
Sbjct: 467 YTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 526

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     + IT+  LL    K   +++AL L   +V  G++ D   Y++++    R+ + +
Sbjct: 527 EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTE 586

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+ +        G+ P    Y  ++    +      A+ +F  M   GC P+  TY  LI
Sbjct: 587 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 646

Query: 550 SGLCKQSKLDEACQFYESMIGKGI 573
            GL  +  L EA      +  KG+
Sbjct: 647 EGLAHEGLLKEARYVLSELYAKGV 670



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 9/267 (3%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ 157
           EQAI ++  +     S+  +++     GF      ++  +  A  L +N   E       
Sbjct: 414 EQAIKLIELMPEYGCSVGIVTYNALVHGFC-----VQGRVDSALELFNNLPCEPNTITYT 468

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
            +++      RL     ++ EM     PL   T N +V   C+ G VE A E+ ++M   
Sbjct: 469 TLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 528

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   +  ++  ++    +     EA   L  ++ +G  LD  T + ++            
Sbjct: 529 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL---SREDRT 585

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++A ++L  +   G +P V  +  ++  LCK+  T++A   F  +V S+   PN  TY  
Sbjct: 586 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV-SNGCMPNESTYII 644

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLL 364
           +I G   E  +  A  +L  +  +G+L
Sbjct: 645 LIEGLAHEGLLKEARYVLSELYAKGVL 671


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 214/457 (46%), Gaps = 10/457 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  +   ++  M + G+     T   ++   C+   V+ A E+ +EMC  G+  +   Y 
Sbjct: 109 RAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYS 168

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  YC+ GR     +    M  RG   D    T LI + C     G +K+A  +++ M
Sbjct: 169 CLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR---HGKVKKAARVMDMM 225

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G +PNV T+ VLI+ +CK+G   +A  L  K +     +P+V TY  +I+G     +
Sbjct: 226 TERGLEPNVVTYNVLINSMCKEGSVREALDLR-KNMSEKGVQPDVVTYNTLITGLSSVLE 284

Query: 348 MNRAEMLLERM--KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           M+ A  LLE M   E  + P+  T+ S+I+G CK+G   +A  +  +M + GC  N+ A+
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I GL +  +V++A EL+ +     LQ D  TY+IL++   K  + ++A      M  
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P+   Y  L+ A C Q  M ++   F E +          Y++MI G  + G    
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGAFKSGEKKI 463

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A ++ + M   G  PD +TY   I+   K   L  A +  + M   G  P      +L  
Sbjct: 464 AEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQ 523

Query: 586 EYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKL 619
            Y  +GD+   + +   +   D  L  + ++T++  L
Sbjct: 524 GYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 193/403 (47%), Gaps = 13/403 (3%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAML--DRGAILDNA-TLTLLITAFC-DKGFRGSI 277
           DA SY  ++ A CR G +  A   L  M    R A   NA + T L+ A C D+      
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADR----RA 110

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            QA  LL  M   G +P+V T+  LI GLC     + A  L  ++  S   +PNV  Y+ 
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCES-GIEPNVVVYSC 169

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ GYCK  +      + E M  +G+ P+   YT+LI   C+ G  ++A  +MD+M + G
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  YN +I+ +CK+G V+EA +L K   ++ +Q D +TY  L++      E  +A+
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289

Query: 458 GLFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
            L   M++    + PD+  + ++I   C+   M+++ +        G       +  +I 
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIG 349

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G LR   +  A++    M   G  PD+ TY  LI+G CK  +++ A  +   M  +G+ P
Sbjct: 350 GLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK--KLWIRTVNTLI 616
             V  + L    C QG    A  +   +D+  KL     +T+I
Sbjct: 410 EPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMI 452



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 192/427 (44%), Gaps = 40/427 (9%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           +A SY  ++ A C   R  +A   L +M D G   D  T   LI   CD      +  A 
Sbjct: 93  NAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDA---ADVDTAV 149

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ELL EM   G +PNV  ++ L+ G CK G  E   ++F ++      +P+V  YTA+I  
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM-SGRGIEPDVVMYTALIDS 208

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            C+  K+ +A  +++ M E+GL PN  TY  LI   CK G+   A DL   M ++G  P+
Sbjct: 209 LCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRE--LQADKITYTILLSEHLKQAETKQALGL 459
           +  YN +I GL     + EA  LL++  Q E  ++ D +T+  ++    K    +QAL +
Sbjct: 269 VVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
              M + G   ++ A+  LI    R  K+K++ +   E  ++GL P   TY+ +I G+ +
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS----------------KLDEAC- 562
              +  A  Y   M   G  P+ + Y  L+  +C Q                 KLD A  
Sbjct: 389 MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAY 448

Query: 563 -----------------QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
                            +F + MI +G+ P  VT       + K GD A A  +L+ +  
Sbjct: 449 STMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTA 508

Query: 606 KLWIRTV 612
             ++  V
Sbjct: 509 SGFVPDV 515



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 209/445 (46%), Gaps = 18/445 (4%)

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
           + R+  + E+   LSA+    ++ D  +   ++ A C +G   +      ++    R   
Sbjct: 34  HLRLLPLPESPALLSAL---PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS 90

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
           +PN  ++T L+  LC      +A  L L+ ++    +P+V TY  +I G C    ++ A 
Sbjct: 91  RPNAISYTTLMRALCADRRAAQAVGL-LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAV 149

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            LL  M E G+ PN   Y+ L++G+CK G +E    + + M   G  P++  Y A+ID L
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C+ G+V++A  ++    +R L+ + +TY +L++   K+   ++AL L   M + G+ PD+
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAG--LFPTKETYTSMICGYLRDGNISSAVKYF 530
             Y TLI       +M E+    +E +     + P   T+ S+I G  + G +  A++  
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M + GC  + + +  LI GL +  K+ +A +  + M   G+ P   T   L   +CK 
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKM 389

Query: 591 GDSATAMIILESLDKK-LWIRTVN--TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
                A   L  +  + +    V+   L++ +C +  +G A   F+++   D+N      
Sbjct: 390 RQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM---DRN------ 440

Query: 648 AALKNACYESNKYALFSDLSQRIAE 672
             L  A Y +  +  F    ++IAE
Sbjct: 441 CKLDAAAYSTMIHGAFKSGEKKIAE 465



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 196/431 (45%), Gaps = 12/431 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V  C++  + + GR +    +  EM+  G+         ++   C  G V+ A  V D M
Sbjct: 166 VYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM 225

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +  +Y +++ + C+ G V EA      M ++G   D  T   LIT        
Sbjct: 226 TERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV--- 282

Query: 275 GSIKQAFELLEEMVR--KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             + +A  LLEEM++     +P++ T   +I GLCK GW  +A ++   ++  +  + N+
Sbjct: 283 LEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR-AMMAENGCRCNL 341

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             +  +I G  +  K+ +A  L++ M   GL P++ TY+ LI G CK+   ERA   +  
Sbjct: 342 VAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSE 401

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +G  P    Y  ++  +C +G + +A +L  +   R  + D   Y+ ++    K  E
Sbjct: 402 MRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGAFKSGE 460

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            K A      M+  GL PD   Y+  I  F +   +  +E+  ++   +G  P    + S
Sbjct: 461 KKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDS 520

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL---CKQSKLDEACQFYESMI 569
           +I GY   G+    ++  + M     A D      +++ L    +  KL ++   +++ I
Sbjct: 521 LIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEI 580

Query: 570 GKG--ISPCEV 578
            KG  ISP +V
Sbjct: 581 SKGDVISPHDV 591


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 230/506 (45%), Gaps = 23/506 (4%)

Query: 147 GNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FE A+ +++               C++S     G++ E      EM  + +P + ST 
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL-STY 412

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++ + C+ G +E A  V D M   G+  +  +  +MV   C+  R+ +A      +  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +    D  T   LI      G  G + +A++L E+M+     PN   +T LI    K G 
Sbjct: 473 KTCRPDAVTYCSLIEGL---GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E   +++ +++R     P++      +    K  ++ +   L + +K  G +P+  +YT
Sbjct: 530 KEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI+G  K G    AY+L   M ++GC  +  AYN +IDG CK G+V +AY+LL++   +
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             +   +TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ E+
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               +E +  GL P   T+  ++   ++   IS A+  FQ M  + C P+ ITY  LI G
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-- 609
           LCK  K ++A  F++ M  +G  P   T  T+     K G+   A  + E   +K  +  
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 610 -RTVNTLIRKLCSEKRVGMAALFFHK 634
               N +I  L +  R   A   F +
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 225/517 (43%), Gaps = 50/517 (9%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM++ F ++  L  G+++ + +         +TL RV       G V+ A  + DEM +
Sbjct: 217 DCMLTLFQQMQEL--GYAVNVHLF--------TTLIRVFA---REGRVDAALSLLDEMKS 263

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK----- 271
             +  D   Y + +  + + G+V  A ++   M   G +LD+ T T +I   C       
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 272 ---------------------------GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                                      G  G  + A+ LLE   RKG  P+V ++  ++ 
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            L +KG  ++A + F ++ +  +  PN+ TY  MI   CK  K+  A ++ + MK+ GL 
Sbjct: 384 CLGRKGQVDEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  T   ++   CK    + A  + + +  + C P+   Y ++I+GL + GRV EAY+L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            ++        + + YT L+    K    +    ++  M++ G +PD+    T +    +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             ++++    FQE    G  P   +YT +I G ++ G    A + F  M + GC  D   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  +I G CK  K+++A Q  E M  KG  P  VT  ++     K      A ++ E   
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 605 KK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            K   L +   ++LI       R+  A L   +L+ K
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 194/415 (46%), Gaps = 11/415 (2%)

Query: 151 RAHEVMQC-MVSSFAEIGRLKEGFSMVIEMTN-NGLP--LITSTLNRVVGIACELGLVEY 206
           R   V  C ++      GR+ E + +  +M + N +P  ++ ++L R     C  G  E 
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF-FKC--GRKED 532

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
             ++++EM   G   D       +    + G + +       + + G I D  + T+LI 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                GF     +A+EL   M  +G   +   +  +IDG CK G   KA++L L+ +++ 
Sbjct: 593 GLVKAGF---AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LEEMKTK 648

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            ++P V TY ++I G  K ++++ A ML E  K +G+  N   Y+SLI G  KVG  + A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y +M+ + ++G TPN+Y +N ++D L K   + EA    +     +   + ITY+IL+  
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +  +A   +  M K G  P++  YTT+I+   +   + E++  F++    G    
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
              Y ++I G       S A + F+     GC+    T   L+  L K   +++A
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 172/410 (41%), Gaps = 10/410 (2%)

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           RW   + DR    +     L++ A   K          ++LEEM   G+ P+  T   ++
Sbjct: 118 RWAERLTDRAHCREAYNSLLMVMARTRK-----FNCLEQILEEMSIAGFGPSNNTCIEIV 172

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               K     +AF  F++ +R   ++P    YT +I         +    L ++M+E G 
Sbjct: 173 LSFIKSRKLREAFT-FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGY 231

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N + +T+LI    + G  + A  L+D M      P++  YN  ID   K G+V  A++
Sbjct: 232 AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
              +     L  D +TYT ++    K     +A+ LF  M +    P  +AY T+I  + 
Sbjct: 292 FFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYG 351

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              K +++    +     G  P+  +Y  ++    R G +  A+K F+ M +    P+  
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLS 410

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I  LCK  KL+ A    ++M   G+ P  +T   +    CK      A  I E L
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 604 DKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           D K       T  +LI  L    RV  A   + ++L  +Q  + V   +L
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 39/432 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR++E + ++ EM +  L     T+N +V   C+   +E A ++F+    RG   D  +Y
Sbjct: 136 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 195

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++    + G+V EA R    MLD G   +    T LI  F      G  +   ++ +E
Sbjct: 196 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF---IHGRKEDGHKIFKE 252

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT---------- 336
           ++R+G KP++      +D + K G  EK  R+  + +RS  + P+V +Y+          
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 337 -------------------------AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                                    A++ G+CK  K+++A  +LE MKE+ + P   TY 
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +++ G  K+   + AY L +    +G   N+  Y+++IDG  K GR+ EAY +L++  ++
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  +  T+  LL   +K  E  +AL  F  M +    P+ + Y+ LI   CR +K  ++
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 491

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             F+Q+    GL P   TYT+MI G  + GNI+ A   F+R    G  PD  ++ ALI G
Sbjct: 492 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551

Query: 552 LCKQSKLDEACQ 563
           +   ++  EA Q
Sbjct: 552 MSNANRAMEAYQ 563



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 234/498 (46%), Gaps = 23/498 (4%)

Query: 145 SNGNFERAHEVMQ------CM--VSSFAEI-------GRLKEGFSMVIEMTNNGLPLITS 189
           S G FE A+++++      C+  V SF  I        ++ E  S+   M  +  P  +S
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSS 123

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C  G VE A  + DEM    +  +  +  +MV   C+  ++ EA +   + 
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             RG   D  T   LI      G +G + +A+ L E+M+  G   N   +T LI      
Sbjct: 184 SQRGCNPDCVTYCSLIDGL---GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E   ++F +L+R    KP++      +    K  ++ +  M+ E ++  G LP+  +
Sbjct: 241 GRKEDGHKIFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+G  K G      ++   M ++G   +  AYNA++DG CK G+V +AYE+L++  
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ +Q    TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ 
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 419

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+ S++   ++   I+ A+  FQ M ++ C P+  TY  LI
Sbjct: 420 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 479

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +GLC+  K ++A  F++ M  +G+ P  VT  T+     K G+   A  + E       I
Sbjct: 480 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 539

Query: 610 ---RTVNTLIRKLCSEKR 624
               + N LI  + +  R
Sbjct: 540 PDAASFNALIEGMSNANR 557



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 210/461 (45%), Gaps = 8/461 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+   GL     +   ++ + C+ G +  AEE+F +M A      A +Y  M++ Y   G
Sbjct: 8   ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 67

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           R  +A + L  + +RG I    +   ++T     G +  + +A  L E M +K  +PN  
Sbjct: 68  RFEDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDEALSLFEVM-KKDAEPNSS 123

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+ ++ID LC  G  E+A+R+  ++  +  + PN+ T   M+   CK  K+  A  + E 
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLF-PNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
             ++G  P+  TY SLI G  K G  + AY L + M   G   N   Y ++I      GR
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            ++ +++ K+  +R  + D       +    K  E ++   +F  +   G  PD+ +Y+ 
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 302

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI    +  + +E+   F      G       Y +++ G+ + G +  A +  + M +  
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P   TYGA++ GL K  +LDEA   +E    KGI    V   +L   + K G    A 
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +ILE + KK     + T N+L+  L   + +  A + F  +
Sbjct: 423 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 161/326 (49%), Gaps = 9/326 (2%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A++ F +L ++   KP+  +YT+MI   CK  ++  AE L  +M+ +  +P    Y ++I
Sbjct: 2   AWKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G+   G FE AY L++ + + GC P++ ++N+I+  L KK +V EA  L  +  +++ +
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            +  TY I++         ++A  +   M  A L P++     ++   C+ +K++E+ K 
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           F+ A   G  P   TY S+I G  + G +  A + F++M   G   + + Y +LI     
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC--KQGDSATAMIILESLDKKLW---I 609
             + ++  + ++ +I +G  P ++T +   Y  C  K G+     +I E +    +   +
Sbjct: 240 HGRKEDGHKIFKELIRRGCKP-DLTLLN-TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKL 635
           R+ + LI  L    +    +  FH +
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAM 323



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 4/233 (1%)

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A++   +   + L+ D ++YT ++    K     +A  LF +M      P  +AY T+I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
            +    + +++ K  +     G  P+  ++ S++    +   +  A+  F+ M +    P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 120

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           ++ TY  +I  LC   +++EA +  + M    + P  +T   +    CK      A  I 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 601 ESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           ES  ++       T  +LI  L  + +V  A   F K+L    N + V   +L
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 179/349 (51%), Gaps = 4/349 (1%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
           A + +Y +++  +C    +  A   L  M   G   ++ T ++++   C  G    + QA
Sbjct: 23  ASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCG---RVAQA 79

Query: 281 FELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            E  +  +     +P+V ++T LI+GLCK G  + AF LF K+V +   +PN  TY A++
Sbjct: 80  LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G CK+++++ A  ++   +++   P+  TY +L+    ++G  + A      M +EG  
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P + ++NAII GLC+  R+ +A E+  +   R+   + +TY++++    K  +  +A  L
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 259

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
             RMV  G  PD+ AYT L+  F    ++  +    +  ++ G  P   TYT +I    +
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 319

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            G +  A + F+ +    C+P+ +TY ALI G C+ S++DE  +    M
Sbjct: 320 VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 9/394 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           LP  + T N ++   C    ++ A  +  EM   G+  +  +  +++   CR GRV +A 
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 244 RWLSAMLDRG-AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTV 301
               A L+   A  D  + T LI   C  G    +  AF+L  +MV  G  +PN +T+  
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLG---RVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+DGLCK+   + A R  +   R  ++ P+V TY  +++   +  +++ A     +M E+
Sbjct: 138 LVDGLCKQDRLDAA-RAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE 196

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G +P   ++ ++I G C+      A ++ + M      PN+  Y+ +IDGLCK  ++ EA
Sbjct: 197 GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEA 256

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            +LL +      + D + YT L+           ALGL  RMV  G  PD+  YT +I  
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            C+  ++ ++ + F+E +     P   TY+++I GY R   +    K    M ++ C P+
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPN 373

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            +TY  +I GL    + +EA   +  M   G  P
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 407



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 13/359 (3%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           GS  QA +L  E   +    +V T+ VLI G C     + AF L L+ +  +  + N  T
Sbjct: 5   GSHNQALQLFRENPCQLPASSV-TYNVLIRGFCNASDLDAAFSL-LREMDVEGMQCNDRT 62

Query: 335 YTAMISGYCKEEKMNRA----EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
            + ++ G C+  ++ +A    +  LE    Q   P+  +YT+LI G CK+G  + A+DL 
Sbjct: 63  TSIILQGLCRCGRVAQALEHFDASLELAHAQ---PDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 391 -DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
             ++   GC PN + YNA++DGLCK+ R+  A  ++ +A +R+   D +TY  L++   +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                +AL  F +M + G  P + ++  +I   CR +++ ++ + F E I     P   T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y+ +I G  +   +  A +   RM   GC PD + Y  L+ G     +LD A      M+
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
            +G  P  VT   +  + CK G    A  I   L        + T + LI   C   RV
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 8/321 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS-TLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++   ++GR+   F +  +M   G     + T N +V   C+   ++ A  V  E   R
Sbjct: 102 LINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKR 161

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               D  +Y  ++ A  ++GRV EA    + M + G +    +   +IT  C +  R  +
Sbjct: 162 DFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC-RARR--L 218

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A E+  EM+ + + PN+ T++V+IDGLCK    ++A +L  ++V S+  +P++  YT 
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV-SEGCRPDLVAYTP 277

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+    +++ A  LL RM  QG +P+  TYT +I   CKVG  + A+++   +    
Sbjct: 278 LVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 337

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C+PN+  Y+A+I G C+  RV E  +++++   R    + +TY  ++         ++A 
Sbjct: 338 CSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAY 394

Query: 458 GLFCRMVKAGLNPDIHAYTTL 478
           G+F  M + G  PD   Y  L
Sbjct: 395 GMFREMSECGFVPDARTYRGL 415


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 230/506 (45%), Gaps = 23/506 (4%)

Query: 147 GNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FE A+ +++               C++S     G++ E      EM  + +P + ST 
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL-STY 412

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++ + C+ G +E A  V D M   G+  +  +  +MV   C+  R+ +A      +  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +    D  T   LI      G  G + +A++L E+M+     PN   +T LI    K G 
Sbjct: 473 KTCRPDAVTYCSLIEGL---GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E   +++ +++R     P++      +    K  ++ +   L + +K  G +P+  +YT
Sbjct: 530 KEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI+G  K G    AY+L   M ++GC  +  AYN +IDG CK G+V +AY+LL++   +
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
             +   +TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ E+
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
               +E +  GL P   T+  ++   ++   IS A+  FQ M  + C P+ ITY  LI G
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI-- 609
           LCK  K ++A  F++ M  +G  P   T  T+     K G+   A  + E   +K  +  
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 610 -RTVNTLIRKLCSEKRVGMAALFFHK 634
               N +I  L +  R   A   F +
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 224/517 (43%), Gaps = 50/517 (9%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            CM++ F ++  L  G+++ + +         +TL RV       G V+ A  + DEM +
Sbjct: 217 DCMLTLFQQMQEL--GYAVNVHLF--------TTLIRVFA---REGRVDAALSLLDEMKS 263

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK----- 271
             +  D   Y + +  + + G+V  A +    M   G +LD+ T T +I   C       
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 272 ---------------------------GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                                      G  G  + A+ LLE   RKG  P+V ++  ++ 
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            L +KG  ++A + F ++ +  +  PN+ TY  MI   CK  K+  A ++ + MK+ GL 
Sbjct: 384 CLGRKGQVDEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  T   ++   CK    + A  + + +  + C P+   Y ++I+GL + GRV EAY+L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            ++        + + YT L+    K    +    ++  M++ G +PD+    T +    +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             ++++    FQE    G  P   +YT +I G ++ G    A + F  M + GC  D   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  +I G CK  K+++A Q  E M  KG  P  VT  ++     K      A ++ E   
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 605 KK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            K   L +   ++LI       R+  A L   +L+ K
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 194/415 (46%), Gaps = 11/415 (2%)

Query: 151 RAHEVMQC-MVSSFAEIGRLKEGFSMVIEMTN-NGLP--LITSTLNRVVGIACELGLVEY 206
           R   V  C ++      GR+ E + +  +M + N +P  ++ ++L R     C  G  E 
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF-FKC--GRKED 532

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
             ++++EM   G   D       +    + G + +       + + G I D  + T+LI 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                GF     +A+EL   M  +G   +   +  +IDG CK G   KA++L L+ +++ 
Sbjct: 593 GLVKAGF---AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LEEMKTK 648

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            ++P V TY ++I G  K ++++ A ML E  K +G+  N   Y+SLI G  KVG  + A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y +M+ + ++G TPN+Y +N ++D L K   + EA    +     +   + ITY+IL+  
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K  +  +A   +  M K G  P++  YTT+I+   +   + E++  F++    G    
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
              Y ++I G       S A + F+     GC+    T   L+  L K   +++A
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 172/410 (41%), Gaps = 10/410 (2%)

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           RW   + DR    +     L++ A   K          ++LEEM   G+ P+  T   ++
Sbjct: 118 RWAERLTDRAHCREAYNSLLMVMARTRK-----FNCLEQILEEMSIAGFGPSNNTCIEIV 172

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
               K     +AF  F++ +R   ++P    YT +I         +    L ++M+E G 
Sbjct: 173 LSFIKSRKLREAFT-FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGY 231

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
             N + +T+LI    + G  + A  L+D M      P++  YN  ID   K G+V  A++
Sbjct: 232 AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
              +     L  D +TYT ++    K     +A+ LF  M +    P  +AY T+I  + 
Sbjct: 292 XFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYG 351

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              K +++    +     G  P+  +Y  ++    R G +  A+K F+ M +    P+  
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLS 410

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           TY  +I  LCK  KL+ A    ++M   G+ P  +T   +    CK      A  I E L
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 604 DKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           D K       T  +LI  L    RV  A   + ++L  +Q  + V   +L
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 209/428 (48%), Gaps = 17/428 (3%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M   G+  +  ++ +++  +C++G +  A   L+ +L  G   D  TL   I  FC   
Sbjct: 93  QMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFC--- 149

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I QA    +++V  G+  +  ++  LI+GLCK G T  A +L L+ V     + N 
Sbjct: 150 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQL-LRRVDGKLVQLNA 208

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y  +I G  K++ +N A  L   M  + + P+  TY++LI G   VG  + A DL + 
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  E   P++Y +N ++DG CK+GR+++A  +L     ++++ +  T+  L+    K  +
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRK 328

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            K+   +F  M+K G+ P++  Y +L+  +C  K++ +++K F      G+     +Y  
Sbjct: 329 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 388

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           MI G+ +   +  A+K F  M+     PD +TY +LI GLCK  K+  A Q    M  +G
Sbjct: 389 MINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRG 448

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAAL 630
             P  +T            +S    ++ +  D+ +   + T   LI+ LC   ++  A  
Sbjct: 449 QPPNIITY-----------NSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARK 497

Query: 631 FFHKLLGK 638
            F  LL K
Sbjct: 498 VFEDLLVK 505



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 225/479 (46%), Gaps = 28/479 (5%)

Query: 98  EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHE--- 154
           + A+++  SL ++  ++ A  F        K +H+  +      SL     FE  +    
Sbjct: 50  DGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL-----SLSQQMEFEGINPNFV 104

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
               +++ F ++G +   FS++ ++   G      TLN  +   C  G +  A    D++
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL--TLLITAFCDKG 272
            A G   D  SY  ++   C++G  T A   L   +D   +  NA +  T++     DK 
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGE-TRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDK- 222

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               +  AF+L  EMV K   P+V T++ LI G    G  + A  LF K++  +N KP+V
Sbjct: 223 ---HVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMIL-ENIKPDV 278

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           +T+  ++ G+CKE ++ +A+ +L+ M  Q + PN +T+ +L+ G CK    +    +  +
Sbjct: 279 YTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAM 338

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M K+G  PN+  Y +++DG C   +V +A ++     QR + A+  +Y I+++   K  +
Sbjct: 339 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 398

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ LF  M    + PD+  Y +LI   C+  K+  + +   E    G  P   TY S
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNS 458

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++   L             ++   G  P+  T   LI GLC+  KL+ A + +E ++ K
Sbjct: 459 ILNALL------------TKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 181/395 (45%), Gaps = 36/395 (9%)

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  +LI  FC  G    I  AF +L ++++ G++P++ T    I G C KG   +A   
Sbjct: 104 VTFNILINCFCQLGL---IPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNF 160

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
             KLV    +   V +Y  +I+G CK  +   A  LL R+  + +  N   Y ++I G  
Sbjct: 161 HDKLVALGFHLDQV-SYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K  +   A+DL   M  +  +P++  Y+A+I G    G++++A +L  K     ++ D  
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+ IL+    K+   K+A  +   M+   + P++  + TL+  FC+ +KMKE +  F   
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G+ P   TY S++ GY     ++ A K F  M+Q G   +  +Y  +I+G CK  K+
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRK 618
           D+A + +  M  K I P  VT                                 N+LI  
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTY--------------------------------NSLIDG 427

Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           LC   ++  A    +++  + Q  + ++  ++ NA
Sbjct: 428 LCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA 462



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 7/253 (2%)

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
            + + A  L + +  +  T   + +N I+  L K         L ++     +  + +T+
Sbjct: 47  NDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTF 106

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
            IL++   +      A  +  +++K G  PDI    T I  FC + ++ ++  F  + + 
Sbjct: 107 NILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVA 166

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            G    + +Y ++I G  + G   +A++  +R++      + + Y  +I G+ K   +++
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTL 615
           A   Y  M+ K ISP  VT   L   +   G    A+     +ILE++   ++  T N L
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY--TFNIL 284

Query: 616 IRKLCSEKRVGMA 628
           +   C E R+  A
Sbjct: 285 VDGFCKEGRLKKA 297


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 201/402 (50%), Gaps = 6/402 (1%)

Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
           S++++M + G        N  + + C    +E A E+F  M ++G   D  SY +++ A 
Sbjct: 105 SLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDAL 164

Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
           C   R  EA +    ++D+G   D      L+   C  G    +  A+EL+  +++ G K
Sbjct: 165 CNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGG---RVDLAYELVVGVIKGGVK 221

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
            N   +  LIDG C+ G  +KA ++   + R+    P++ TY  +++  C+E  ++ A  
Sbjct: 222 VNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT-GCVPDLVTYNILLNYCCEEGMVDEAVR 280

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGL 412
           L+E M+  G+ P+  +Y  L+ G CK    +RA+ +M + M  +G   ++ +YN +I   
Sbjct: 281 LVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAF 339

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK  R ++ YEL ++   + ++ D +T+ IL+   L++  T     L   M K  + PD 
Sbjct: 340 CKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDC 399

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             YT ++   C+  K+  +   F++ +  G+ P   +Y +++ G+ +   +  A+  F  
Sbjct: 400 IFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDE 459

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
           M   G  PD +TY  ++ GL +  K+  AC+ ++ M+ +G +
Sbjct: 460 MQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFT 501



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 179/367 (48%), Gaps = 4/367 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M + G   D  ++   +   CR  R+  A     +M  +G   D  + T++I A C+  
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
                 +A ++   ++ KG  P+      L+ GLC  G  + A+ L + +++    K N 
Sbjct: 169 ---RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG-GVKVNS 224

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y A+I G+C+  ++++A  +   M   G +P+  TY  L+   C+ G  + A  L++ 
Sbjct: 225 LVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M + G  P++Y+YN ++ G CK   V  A+ ++ +  Q +   D ++Y  +++   K   
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARR 344

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
           T++   LF  M   G+ PD+  +  LI AF R+      +K   E     + P    YT+
Sbjct: 345 TRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTA 404

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++    ++G +  A   F+ M + G  PD I+Y AL++G CK S++ +A   ++ M  KG
Sbjct: 405 VVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464

Query: 573 ISPCEVT 579
           + P EVT
Sbjct: 465 LYPDEVT 471



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 232/507 (45%), Gaps = 13/507 (2%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF-DEMCARG 218
           +S   + G + +   +  +MT +   + +   NR +G+      +  A   +   +  RG
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR---GAILDNATLTLLITAFCDKGFRG 275
                 +Y   + A C            S +LD    G + D       +   C +    
Sbjct: 77  FSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQ---N 133

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            ++ A EL   M  KG  P+V ++T++ID LC     ++A +++ +L+      P+    
Sbjct: 134 RLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI-DKGLSPDYKAC 192

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            A++ G C   +++ A  L+  + + G+  N+  Y +LI G C++G  ++A  +   M +
Sbjct: 193 VALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSR 252

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC P++  YN +++  C++G V EA  L++   +  ++ D  +Y  LL    K     +
Sbjct: 253 TGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDR 312

Query: 456 A-LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A L +  RM   G+  D+ +Y T+I AFC+ ++ ++  + F+E    G+ P   T+  +I
Sbjct: 313 AHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILI 371

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
             +LR+G+     K    M ++   PD I Y A++  LCK  K+D A   +  M+  G++
Sbjct: 372 DAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVN 431

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK-LWIRTVN--TLIRKLCSEKRVGMAALF 631
           P  ++   L   +CK      AM + + +  K L+   V    ++  L   K++ +A   
Sbjct: 432 PDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRV 491

Query: 632 FHKLLGKDQNVDRVSLAALKNACYESN 658
           + +++ +   ++R     L NA   S+
Sbjct: 492 WDQMMERGFTLNRHLSETLVNAIQSSD 518



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 4/283 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++  F  +GR+ +   +   M+  G      T N ++   CE G+V+ A  + + M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  D  SY  ++  +C+   V  A   +   +    + D  +   +ITAFC K  R
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFC-KARR 344

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              ++ +EL EEM  KG +P++ T  +LID   ++G T    +L  ++ +     P+   
Sbjct: 345 --TRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKM-RVLPDCIF 401

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YTA++   CK  K++ A  +   M E G+ P+  +Y +L+ G CK      A  L D M 
Sbjct: 402 YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQ 461

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
            +G  P+   Y  I+ GL +  ++  A  +  +  +R    ++
Sbjct: 462 SKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNR 504



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 134/361 (37%), Gaps = 77/361 (21%)

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA-------- 421
           Y S I    K G   +A  L D M +  C      YN  I  L +  R+  A        
Sbjct: 13  YRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHV 72

Query: 422 ----YELLKKAFQRELQA---------------------------DKITYTILLSEHLKQ 450
               + LL   + R + A                           D   +   L+   +Q
Sbjct: 73  IPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQ 132

Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE-- 508
              + AL LF  M   G +PD+ +YT +I A C  K+  E+ K ++  I  GL P  +  
Sbjct: 133 NRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKAC 192

Query: 509 ---------------------------------TYTSMICGYLRDGNISSAVKYFQRMNQ 535
                                             Y ++I G+ R G +  A+K    M++
Sbjct: 193 VALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSR 252

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DS 593
            GC PD +TY  L++  C++  +DEA +  E+M   G+ P   +   L   +CK    D 
Sbjct: 253 TGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDR 312

Query: 594 ATAMIILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
           A  M++     K +  + + NT+I   C  +R       F ++ GK    D V+   L +
Sbjct: 313 AHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILID 372

Query: 653 A 653
           A
Sbjct: 373 A 373



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 37/188 (19%)

Query: 83  PPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS--FFYWAIGFAKFRHFMRLYIVCA 140
           P  +   I ID+   E +  VV  L +E   M  L    FY A+                
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAV---------------V 406

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
             L  NG  + AH V +                    +M  NG+     + N ++   C+
Sbjct: 407 DHLCKNGKVDVAHSVFR--------------------DMVENGVNPDVISYNALLNGFCK 446

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
              V  A  +FDEM ++G+  D  +YKL+V    R  +++ A R    M++RG  L+   
Sbjct: 447 TSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHL 506

Query: 261 LTLLITAF 268
              L+ A 
Sbjct: 507 SETLVNAI 514


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 213/405 (52%), Gaps = 13/405 (3%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKG 272
           +C   +  +A S  L+ V   R G+ + +  + + +  +G    D    + LITA+ + G
Sbjct: 23  LCTHQMLPEAKS--LIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESG 80

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL---FLKLVRSDNYK 329
           F     + F L  E   K W P      VL D L K     K F+L   F K +    Y 
Sbjct: 81  FLRDALECFRLSRE--HKFWVPFDTCRKVL-DHLMKL----KYFKLVWGFYKEILECGYP 133

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +++ +  ++  +CKE ++  A+++ + + + GL P+  ++ +L+ G+ K+G  +  + L
Sbjct: 134 ASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRL 193

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M   G  P++Y Y+ +I+GLCK+ ++ EA+EL  +  ++ L  + +T+T L+  H K
Sbjct: 194 KNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCK 253

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   A+ ++ +++  GL+PD+  Y TLI  FC++  +K++     E    GL P K T
Sbjct: 254 NGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G  ++G++ +A +Y ++M +     D++ Y ALISGLCK+ +  +A +    M+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREML 373

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
             G+ P   T   +  E+CK GD  T   +L+ + +   + +V T
Sbjct: 374 SVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 4/295 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+   G P      N ++   C+ G +  A+ VFD +   G+     S+  ++  Y +MG
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG 185

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + E  R  +AM   GA  D  T ++LI   C +     + +A EL +EM+ KG  PN  
Sbjct: 186 ILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKE---SKMDEAHELFDEMLEKGLVPNGV 242

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LIDG CK G  + A  ++ K + S    P++ TY  +I G+CK+  + +   L++ 
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIY-KQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDE 301

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL P+  TYT+LI G CK G+ E A++    M +E    +   Y A+I GLCK+GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGR 361

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
             +A ++L++     L+ D  TYTI+++E  K  +      L   M + G  P +
Sbjct: 362 SVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSV 416



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 131/244 (53%), Gaps = 4/244 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + ++G L EGF +   M  +G      T + ++   C+   ++ A E+FDEM  +G
Sbjct: 177 LMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKG 236

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+ G++  A      +L +G   D  T   LI  FC K   G +K
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKK---GDLK 293

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           Q  +L++EM  KG KP+  T+T LIDG CK+G  E AF    K++  +N + +   YTA+
Sbjct: 294 QTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIE-ENIRLDDVVYTAL 352

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG CKE +   AE +L  M   GL P++ TYT ++   CK G+      L+  M ++G 
Sbjct: 353 ISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGH 412

Query: 399 TPNI 402
            P++
Sbjct: 413 VPSV 416



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G LK+   ++ EM+  GL     T   ++  +C+ G +E A E   +M    
Sbjct: 282 LIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEEN 341

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  ++   C+ GR  +A++ L  ML  G   D+ T T+++  FC     G + 
Sbjct: 342 IRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCK---NGDVN 398

Query: 279 QAFELLEEMVRKGWKPNVYT 298
              +LL+EM R G  P+V T
Sbjct: 399 TGSKLLKEMQRDGHVPSVVT 418


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           T + N ++   C+   ++ A ++F EM A G     S+Y  ++   CR+ R+ EA ++  
Sbjct: 101 TVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYE 160

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            +L  GA     T  +L+  FC K  R  + +A ELL E+V +G       +  +ID L 
Sbjct: 161 RLLSSGAGASFITYNILVDGFC-KADR--VPEAVELLNELVARGGVVTSAPYNCIIDTLF 217

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           KKG   +A  LF   +  D  +P   T+T +I G CK  ++ RA+ +     E G  P+ 
Sbjct: 218 KKGKIHEA-ELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSV 276

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              + L+ G CK G  + A+ + +LM   GCTPN  + N +I+GLCK  R+ +A E+ ++
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE 336

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             +R+ + D +TY+  +    +     QA  + C +V  G  PD+  YT LI+  C   +
Sbjct: 337 VVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGR 396

Query: 488 MKESEKFFQ-EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           + E+ K F+ +   AG  P   T   ++ G+   G +  A + FQR  + G  PD  T+ 
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456

Query: 547 ALISGLCKQSKLD 559
           A+ +   K    D
Sbjct: 457 AMANNTAKTEGWD 469



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 188/410 (45%), Gaps = 14/410 (3%)

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           +V+  C +G++ EA     +++  G  L    L   ++        G  ++  ++++ M+
Sbjct: 5   IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSK------AGRAEECLKVVKLML 58

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT--YTAMISGYCKEE 346
            +      +   + ID LCK    +KA   F +L    +++  V+T  Y  +I+ +CK +
Sbjct: 59  DRQQLRERHLVNITIDSLCKSDMIDKAESWFQEL---KDFRGLVNTVSYNILINAFCKTK 115

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +++ A  L   MK  G  P+T+TY +LI G C+V     A    + +   G   +   YN
Sbjct: 116 RIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYN 175

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++DG CK  RV EA ELL +   R        Y  ++    K+ +  +A   F RM K 
Sbjct: 176 ILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKD 235

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+ P    +T LI   C+  ++  +++ F   + +G  P+    + ++ G+ + G +  A
Sbjct: 236 GVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEA 295

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            + F+ M   GC P++++   LI+GLCK  +L +A + +E ++ +   P  VT  T    
Sbjct: 296 WRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDG 355

Query: 587 YCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFH 633
            C+      A  +L  L  K     V     LI  LCS  R+  A   F 
Sbjct: 356 LCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFE 405



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 210/470 (44%), Gaps = 11/470 (2%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C +G ++ A E+F  + + G    A    L+V    + GR  E  + +  MLDR  + + 
Sbjct: 10  CHVGKLDEALELFHSLVSDGCGLPAD---LLVRELSKAGRAEECLKVVKLMLDRQQLRER 66

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
             + + I + C        +  F+ L++   +G   N  ++ +LI+  CK    ++A +L
Sbjct: 67  HLVNITIDSLCKSDMIDKAESWFQELKDF--RGL-VNTVSYNILINAFCKTKRIDEAIQL 123

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ ++    P+  TY  +I G C+ E++  A+   ER+   G   +  TY  L+ G C
Sbjct: 124 FGEM-KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFC 182

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      A +L++ +   G       YN IID L KKG++ EA     +  +  ++  ++
Sbjct: 183 KADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEV 242

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           T+T+L+    K     +A  +F   +++G +P +   + L+  FC+   + E+ + F+  
Sbjct: 243 TFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELM 302

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
              G  P   +   +I G  +   +S A + F+ + +    PD +TY   + GLC+  ++
Sbjct: 303 TNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRV 362

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNT 614
           D+A Q    ++ KG +P  V    L    C  G    A  + E   +         T N 
Sbjct: 363 DQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNV 422

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFS 664
           L+       R+  A   F + + +    D  + +A+ N   ++  + ++S
Sbjct: 423 LVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWDIYS 472



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 5/259 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C++ +  + G++ E       M  +G+     T   ++   C+   V  A+E+F     
Sbjct: 210 NCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLE 269

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G          ++  +C+ G V EA R    M +RG   ++ +  +LI   C K  R  
Sbjct: 270 SGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLC-KAKR-- 326

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + QA E+ EE+V++  KP+V T++  +DGLC+    ++A ++   LV      P+V  YT
Sbjct: 327 LSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGG-TPDVVMYT 385

Query: 337 AMISGYCKEEKMNRAEMLLE-RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           A+ISG C   +++ A  + E  M+  G  PN  T   L+ G    G  + A +L     +
Sbjct: 386 ALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVE 445

Query: 396 EGCTPNIYAYNAIIDGLCK 414
            G  P+   ++A+ +   K
Sbjct: 446 RGVQPDCRTFSAMANNTAK 464



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 3/192 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +  C++  F + G + E + +   MTN G      + N ++   C+   +  A EVF+E+
Sbjct: 278 ICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEV 337

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             R    D  +Y   +   CR  RV +A + L  ++D+G   D    T LI+  C  G  
Sbjct: 338 VKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRL 397

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              ++ FE+  +M   G  PN +T  VL++G    G  ++A  LF + V     +P+  T
Sbjct: 398 DEARKVFEV--DMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVER-GVQPDCRT 454

Query: 335 YTAMISGYCKEE 346
           ++AM +   K E
Sbjct: 455 FSAMANNTAKTE 466


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 237/508 (46%), Gaps = 23/508 (4%)

Query: 145 SNGNFERAHEVMQ------CM--VSSFAEI-------GRLKEGFSMVIEMTNNGLPLITS 189
           S G FE A+++++      C+  V SF  I        ++ E  S+   M  +  P  +S
Sbjct: 331 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSS 389

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C  G VE A  + DEM    +  +  +  +MV   C+  ++ EA +   + 
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             RG   D  T   LI      G +G + +A+ L E+M+  G   N   +T LI      
Sbjct: 450 SQRGCNPDCVTYCSLIDGL---GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 506

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E   ++F +L+R    KP++      +    K  ++ +  M+ E ++  G LP+  +
Sbjct: 507 GRKEDGHKIFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 565

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+G  K G      ++   M ++G   +  AYNA++DG CK G+V +AYE+L++  
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ +Q    TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ 
Sbjct: 626 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 685

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+ S++   ++   I+ A+  FQ M ++ C P+  TY  LI
Sbjct: 686 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 745

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +GLC+  K ++A  F++ M  +G+ P  VT  T+     K G+   A  + E       I
Sbjct: 746 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 805

Query: 610 ---RTVNTLIRKLCSEKRVGMAALFFHK 634
               + N LI  + +  R   A   F +
Sbjct: 806 PDAASFNALIEGMSNANRAMEAYQVFEE 833



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 216/479 (45%), Gaps = 8/479 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F + G +   +    E+   GL     +   ++ + C+ G +  AEE+F +M A   
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y   GR  +A + L  + +RG I    +   ++T     G +  + +
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDE 372

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L E M +K  +PN  T+ ++ID LC  G  E+A+R+  ++  +  + PN+ T   M+
Sbjct: 373 ALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF-PNLLTVNIMV 430

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK  K+  A  + E   ++G  P+  TY SLI G  K G  + AY L + M   G  
Sbjct: 431 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 490

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N   Y ++I      GR ++ +++ K+  +R  + D       +    K  E ++   +
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   G  PD+ +Y+ LI    +  + +E+   F      G       Y +++ G+ +
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 610

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A +  + M +    P   TYGA++ GL K  +LDEA   +E    KGI    V 
Sbjct: 611 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 670

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L   + K G    A +ILE + KK     + T N+L+  L   + +  A + F  +
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 207/463 (44%), Gaps = 70/463 (15%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR++E + ++ EM +  L     T+N +V   C+   +E A ++F+    RG   D  +Y
Sbjct: 402 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 461

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRG---------AILDN------------------- 258
             ++    + G+V EA R    MLD G         +++ N                   
Sbjct: 462 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 521

Query: 259 ----ATLTLLITAFCDKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLI---------- 303
                 LTLL T + D  F+ G +++   + E++   G+ P+V ++++LI          
Sbjct: 522 RGCKPDLTLLNT-YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580

Query: 304 -------------------------DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
                                    DG CK G   KA+ + L+ ++    +P V TY A+
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI-LEEMKEKCVQPTVATYGAI 639

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G  K ++++ A ML E  K +G+  N   Y+SLI G  KVG  + AY +++ M K+G 
Sbjct: 640 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 699

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN+Y +N+++D L K   + EA    +   + +   +  TY+IL++   +  +  +A  
Sbjct: 700 TPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFV 759

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +  M K GL P++  YTT+I+   +   + ++   F+     G  P   ++ ++I G  
Sbjct: 760 FWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMS 819

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
                  A + F+     GC  +  +  +L+  L K   L++A
Sbjct: 820 NANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 142/316 (44%), Gaps = 4/316 (1%)

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           + +   +  +++ A + +  M+     P  + YT LI    +    ERA +L+  M + G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
               ++ +  ++  L ++G+V +A  L+ +     L+ D + Y + +    K      A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  +   GL PD  +YT++I   C+  ++ E+E+ F +       P    Y +MI GY
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G    A K  +R+ + GC P  +++ ++++ L K+ K+DEA   +E M  K   P  
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNS 388

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            T   +    C  G    A  IL+ ++       + TVN ++ +LC  +++  A   F  
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 635 LLGKDQNVDRVSLAAL 650
              +  N D V+  +L
Sbjct: 449 ASQRGCNPDCVTYCSL 464


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 39/449 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           M CM       GR+ E + +  EM   GL     ++N +V   C+   +E A  +F+   
Sbjct: 394 MLCMA------GRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR- 274
            RG   ++ +Y  ++    + G++ +A R    MLD G   +    T LI  F   G + 
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507

Query: 275 -------------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                                          G +++   + E+M   G+ P+V ++++LI
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GL K G   +   +F + +    +  +   Y A++ G CK  K+++A  +LE MK + +
Sbjct: 568 HGLTKAGQARETSNIF-QAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P   TY S++ G  K+   + AY L +    +G   N+  Y+++IDG  K GR+ EAY 
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +L++  ++ L  +  T+  L+   +K  E  +AL  F  M +   +P+ + Y+ LI   C
Sbjct: 687 ILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLC 746

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R +K  ++  F+QE    GL P   TYT+MI G  + GNI+ A   F+R    G  PD+ 
Sbjct: 747 RVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ ALI G+   ++  EA Q +E    +G
Sbjct: 807 SFNALIEGMSNANRPMEAYQVFEETRLRG 835



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 218/460 (47%), Gaps = 8/460 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           ++ E  ++   M  +  P I ST N ++ + C  G V  A ++ DEM   G+  +  S  
Sbjct: 366 KVDEALTLFDVMKKDAKPNI-STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN 424

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +MV   C+  ++ EA R   +  +RG   ++ T   LI      G +G I  A+ L E+M
Sbjct: 425 IMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL---GKKGKIDDAYRLFEKM 481

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +  G   N   +T LI      G  E   +++ +++R    +P++      +    K  +
Sbjct: 482 LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG-RPDLTLLNTYMDCVFKAGE 540

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           + +   + E MK  G LP+  +Y+ LI+G  K G      ++   M ++G   +  AYNA
Sbjct: 541 VEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++DGLCK G+V +AYE+L++   + +     TY  ++    K     +A  LF      G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           +  ++  Y++LI  F +  ++ E+    +E +  GL P   T+ S++   ++   I  A+
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             FQ M ++ C+P+  TY  LI+GLC+  K ++A  F++ M  +G+ P  VT  T+    
Sbjct: 721 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780

Query: 588 CKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKR 624
            K G+   A  + E       I    + N LI  + +  R
Sbjct: 781 AKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANR 820



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 229/529 (43%), Gaps = 23/529 (4%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEG 172
           KFR     Y V   +L      ERA E+++ M               V + A  G+++  
Sbjct: 171 KFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPA 230

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            ++V E+  + L       N  +    + G V+ A + F E+ A G+  D  SY  MV  
Sbjct: 231 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWV 290

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            C+ GR+ EA+     M     +        +I  +   G       A++LLE +  +G 
Sbjct: 291 LCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY---GSAERFDDAYKLLERLRERGC 347

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P+V +   ++  L KK   ++A  LF   V   + KPN+ TY  +I   C   ++N A 
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLFD--VMKKDAKPNISTYNIIIDMLCMAGRVNEAY 405

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            + + M+  GL PN  +   ++   CK    E A+ + +   + GC PN   Y ++IDGL
Sbjct: 406 KIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            KKG++ +AY L +K       A+ I YT L+         +    ++  M++ G  PD+
Sbjct: 466 GKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDL 525

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
               T +    +  ++++    F++  + G  P   +Y+ +I G  + G        FQ 
Sbjct: 526 TLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQA 585

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M+Q G A D   Y A++ GLCK  K+D+A +  E M  K + P   T  ++     K   
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645

Query: 593 SATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              A ++ E    K   L +   ++LI       R+  A L   +++ K
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK 694



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 219/514 (42%), Gaps = 43/514 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F + G +   +    E+  +GL     +   +V + C+ G +  AEE+F +M A   
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD 312

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y    R  +A + L  + +RG I    +   ++T     G +  + +
Sbjct: 313 VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDE 369

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L + M +K  KPN+ T+ ++ID LC  G   +A+++  ++  +  + PN+ +   M+
Sbjct: 370 ALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLF-PNLLSVNIMV 427

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK  ++  A  + E   E+G  PN+ TY SLI G  K G  + AY L + M   G  
Sbjct: 428 DRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD 487

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N   Y ++I      GR ++ +++ K+  +R  + D       +    K  E ++   +
Sbjct: 488 ANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  M   G  PD+ +Y+ LI    +  + +E+   FQ     G       Y +++ G  +
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES------------ 567
            G +  A +  + M      P   TYG+++ GL K  +LDEA   +E             
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL 667

Query: 568 -----------------------MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
                                  M+ KG++P   T  +L     K  +   A+I  +S+ 
Sbjct: 668 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK 727

Query: 605 K---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +        T + LI  LC  ++   A +F+ ++
Sbjct: 728 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 761



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 154/349 (44%), Gaps = 35/349 (10%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR---------------LFLK 321
           ++ AF ++  M    ++P    +TVLI  L +    E+A                 LF  
Sbjct: 157 LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216

Query: 322 LVRS--------------DNYK-----PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           LVR+              D  K     P++  Y   I  + K   ++ A      +K  G
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L P+  +YTS+++  CK G    A +L   M  E   P  YAYN +I G     R  +AY
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +LL++  +R      +++  +L+   K+ +  +AL LF  M K    P+I  Y  +I   
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDML 395

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   ++ E+ K   E   AGLFP   +   M+    +   +  A + F+  ++ GC P++
Sbjct: 396 CMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +TY +LI GL K+ K+D+A + +E M+  G     +   +L   +   G
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 39/288 (13%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S   F         +V    + G++ + + ++ EM    +    +T   +V    ++  
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A  +F+E  ++G+  +   Y  ++  + ++GR+ E                      
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDE---------------------- 683

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
                           A+ +LEEM++KG  PNVYT   L+D L K    ++A   F  + 
Sbjct: 684 ----------------AYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM- 726

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +     PN +TY+ +I+G C+ +K N+A +  + M++QGL+PN  TYT++I G  KVGN 
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
             AY L +     G  P+  ++NA+I+G+    R  EAY++ ++   R
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLR 834



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 164/392 (41%), Gaps = 44/392 (11%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ++LEEM   G+         L+  L +    E AFR+ +  +R   ++P    YT +I  
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRV-IGAMRHLKFRPPFSAYTVLIGA 185

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             +  +  RA  LL +M++ G   +   +T+L+    + G  E A  L+D +      P+
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           I  YN  ID   K G V  A++     F  EL+A                          
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWK-----FFHELKAH------------------------- 275

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
                GL PD  +YT+++   C+  ++ E+E+ F +       P    Y +MI GY    
Sbjct: 276 -----GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
               A K  +R+ + GC P  +++ ++++ L K+ K+DEA   ++ M  K   P   T  
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYN 389

Query: 582 TLAYEYCKQGDSATAMIILESLD-KKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +    C  G    A  I + ++   L+  + +VN ++ +LC   ++  A   F     +
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 639 DQNVDRVSLAALKNACYESNK----YALFSDL 666
             N + V+  +L +   +  K    Y LF  +
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 24/312 (7%)

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRL 169
           +AG     S  + A+    F    R Y      L  +G  ++A+EV++            
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLE------------ 619

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
                   EM    +    +T   +V    ++  ++ A  +F+E  ++G+  +   Y  +
Sbjct: 620 --------EMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +  + ++GR+ EA   L  M+ +G   +  T   L+ A         I +A    + M  
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKT---EEIDEALICFQSMKE 728

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
               PN YT+++LI+GLC+     KAF +F + ++     PNV TYT MISG  K   + 
Sbjct: 729 MKCSPNTYTYSILINGLCRVQKYNKAF-VFWQEMQKQGLIPNVVTYTTMISGLAKVGNIT 787

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  L ER K  G +P++ ++ +LI G         AY + +     GC  N+    +++
Sbjct: 788 DAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847

Query: 410 DGLCKKGRVQEA 421
           D L K   +++A
Sbjct: 848 DALNKTECLEQA 859


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 220/464 (47%), Gaps = 6/464 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    + GR++E F +  ++    +       N ++   C+ G+   A+ + +EM  +G
Sbjct: 308 MLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKG 367

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++ + C+ G + +A   L  M ++G  +       LI   C K     + 
Sbjct: 368 LEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKD---DLD 424

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A   L EMV  G  PN  +++ +I GLC+KG    A  L  K+        N +T+TA+
Sbjct: 425 MAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEK-GVAWNTYTFTAL 483

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+CK +KM+ A  L  +M E  L PN  T+ ++I G+C VG+  +A+ L D M   G 
Sbjct: 484 INGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TP+ Y Y ++I GLC      +A E +          +K + T LL    ++    +A  
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYH 603

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M   G   D+ ++T ++ A  +Q   ++S   F+E    G+ P    +T MI  Y 
Sbjct: 604 VWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYS 663

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++GN+  A+  +  M   G  P+ +TY AL++ LCK   L  A    + M+     P   
Sbjct: 664 KEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSY 723

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLW--IRTVNTLIRKLC 620
           T       +  +G+  TA  +  ++ +     I +VNTLI+  C
Sbjct: 724 TFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFC 767



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 205/436 (47%), Gaps = 7/436 (1%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  +   ++ +  ++ +   A      ML  G +LD    T  I A+C+     ++
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVR---NL 213

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  L+  M  +G K +   + VLI GLCK     +A  +   ++        V T   
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV-TCRT 272

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G+C+ E+++ A  +   M   G +P+    + ++ G  K G  E A+ L   +G+  
Sbjct: 273 LVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELR 332

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PNI+AYNA+++ +CK G   EA  L+ +   + L+ +++TY IL+    K+     AL
Sbjct: 333 MVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDAL 392

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +  RM + G+   ++ Y +LI   C++  +  +  F  E +  GL P   +Y+ +I G 
Sbjct: 393 CMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGL 452

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R G++S AV+  ++M + G A +  T+ ALI+G CK  K+DEA + +  M    + P E
Sbjct: 453 CRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNE 512

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
           VT   +   YC  GD   A  + + +  +       T  +LI  LC       A  F   
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572

Query: 635 LLGKDQNVDRVSLAAL 650
           L      +++ SL AL
Sbjct: 573 LENNCSVLNKFSLTAL 588



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 217/472 (45%), Gaps = 15/472 (3%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A  +FD M   GV  D   Y   + AYC +  +  A   ++ M D G  +      +LI 
Sbjct: 181 ARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIY 240

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C       +++A ++   M+ +G   +  T   L+ G C+    + A  +   + R  
Sbjct: 241 GLCKNQ---RVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARL- 296

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
            + P+    + M+ G  K+ ++  A  L  ++ E  ++PN   Y +L+   CK G F  A
Sbjct: 297 GFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEA 356

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             L++ M  +G  PN   Y  +I  LCK+G + +A  +L +  ++ ++     Y  L++ 
Sbjct: 357 DRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC 416

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
             K+ +   A+G    MV+ GL P+  +Y+ +IA  CR+  +  + +  ++    G+   
Sbjct: 417 CCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWN 476

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T+T++I G+ +   +  A + F +M +    P+ +T+ A+I G C    + +A Q Y+
Sbjct: 477 TYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYD 536

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEK 623
            M+ +G++P   T  +L    C    ++ A   +  L+    +    ++  L+   C E 
Sbjct: 537 QMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREG 596

Query: 624 RVGMAALFFHKLLGKDQNVDRVSL-----AALKNACYESNKY-ALFSDLSQR 669
           R+  A   ++++      +D +S      AALK   ++S K   LF ++ ++
Sbjct: 597 RLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQ--HDSEKSCVLFREMKEK 646



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 207/499 (41%), Gaps = 69/499 (13%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           +S+   E        ++ S  + G + +   M+  M   G+ +     N ++   C+   
Sbjct: 363 MSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDD 422

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A     EM   G+  +A+SY  ++   CR G ++ A      M ++G   +  T T 
Sbjct: 423 LDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTA 482

Query: 264 LITAFC-----DKGFR---------------------------GSIKQAFELLEEMVRKG 291
           LI  FC     D+  R                           G I++AF+L ++M+ +G
Sbjct: 483 LINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRG 542

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P+ YT+  LI GLC      KA + F+  + ++    N  + TA++ G+C+E ++  A
Sbjct: 543 LTPDNYTYRSLISGLCLTDGASKA-KEFVADLENNCSVLNKFSLTALLHGFCREGRLTEA 601

Query: 352 -----EM------------------------------LLERMKEQGLLPNTNTYTSLIYG 376
                EM                              L   MKE+G+ P+   +T +I  
Sbjct: 602 YHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINM 661

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           + K GN  +A +  D M  +G  PN   Y A+++ LCK   +  A  L K+        +
Sbjct: 662 YSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPN 721

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             T+   L     +   + A  L+  M++ G   +I +  TLI  FC+  +++E+     
Sbjct: 722 SYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLIS 780

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
            +   G FP   +Y+++I    + G+I+ A++ +  M   G  PD + Y  LI       
Sbjct: 781 RSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHG 840

Query: 557 KLDEACQFYESMIGKGISP 575
           + D+    Y  M+ KG+ P
Sbjct: 841 ESDKCLGIYIDMVKKGVQP 859



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 186/390 (47%), Gaps = 34/390 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F +  ++ E   +  +MT + L     T N V+   C +G +  A +++D+M  RG
Sbjct: 483 LINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRG 542

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           +  D  +Y+ ++   C     ++A  +++ + +  ++L+  +LT L+  FC +G      
Sbjct: 543 LTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAY 602

Query: 273 ---------------------FRGSIKQ-----AFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                   ++KQ     +  L  EM  KG +P+   HT +I+  
Sbjct: 603 HVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMY 662

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            K+G   +A   + +++ +D + PN  TYTA+++  CK   ++ AE+L + M     LPN
Sbjct: 663 SKEGNMVQALNCWDEMI-ADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPN 721

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           + T+   +      GN E A DL   M  +G   NI + N +I G CK G++QEA +L+ 
Sbjct: 722 SYTFNCFLDYFATEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLIS 780

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           ++ +     D I+Y+ ++ E  K+ +  +A+ L+  M+  G+ PDI AY  LI       
Sbjct: 781 RSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHG 840

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICG 516
           +  +    + + +  G+ P   T+ ++  G
Sbjct: 841 ESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 38/320 (11%)

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L L  S    P+ HT + ++    K  +   A  L + M   G+L +   YT+ I  +C+
Sbjct: 150 LHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCE 209

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
           V N + A  L+  M  EG   +   YN +I GLCK  RV+EA ++      R + AD++T
Sbjct: 210 VRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVT 269

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
                                CR              TL+  FCR +++  + +   +  
Sbjct: 270 ---------------------CR--------------TLVYGFCRTEELDMALEMTGDMA 294

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P++   + M+ G  + G +  A +   ++ ++   P+   Y AL++ +CK     
Sbjct: 295 RLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFS 354

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLI 616
           EA +    M  KG+ P EVT   L +  CK+G    A+ +L+ + +K   + +   N+LI
Sbjct: 355 EADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLI 414

Query: 617 RKLCSEKRVGMAALFFHKLL 636
              C +  + MA  F  +++
Sbjct: 415 NCCCKKDDLDMAMGFLSEMV 434


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 237/518 (45%), Gaps = 23/518 (4%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +SS    G L     +V    ++  P   +  NR+V   C  G    A  V +   A G 
Sbjct: 63  LSSLVHRGELDAALRVV---ESSLCPPDVALANRLVRDLCRRGRPADAARVVE---ACGS 116

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIK 278
            A A +Y  +   YCR+GR+ EA R +  M     +L +A     L+ A C    RG ++
Sbjct: 117 AATAVTYSALADGYCRVGRLDEARRVVDGM----PVLPSAYAYNPLMHALC---VRGQVR 169

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL+ M+ +G  P+V T+ +L++  CK     +A  L + L+R +   P   TY  +
Sbjct: 170 DALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMEL-IDLMRVEGCTPTNVTYNVI 228

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G C+E  ++ A  LL  +   G  PNT  Y +++ G    G +E   +L+  M  E C
Sbjct: 229 MDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENC 288

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+    + +I  LC++G  Q A  LL+K  + +  A+ +TY  ++S   +Q     AL 
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALY 348

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M   G  P+I  Y  L+   C  ++ +++E    +       P   T+ ++I    
Sbjct: 349 LLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLC 408

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G    AV+ F++M + GC P+++TY ++I GL K  K++++ +    M  KG +P E+
Sbjct: 409 QKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP-EI 467

Query: 579 TRVTLAYEYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
               LA    ++     A+ ++  L D  +  + V  NT++  LC   +   A      +
Sbjct: 468 NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNM 527

Query: 636 LGK----DQNVDRVSLAALKNACYESNKYALFSDLSQR 669
           +      D++   + +  L +  Y      L S LS R
Sbjct: 528 VSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 200/449 (44%), Gaps = 41/449 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL--NRVVGIACELGLVEYAEEVFDEMCA 216
           +   +  +GRL E   +V     +G+P++ S    N ++   C  G V  A  + D M  
Sbjct: 126 LADGYCRVGRLDEARRVV-----DGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLY 180

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD------ 270
           RG   D  +Y +++ A C+     +A   +  M   G    N T  +++   C       
Sbjct: 181 RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDY 240

Query: 271 ------------------------KGFR--GSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
                                   KG R  G  +   EL+ EM  +   P+  T +V+I 
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVIS 300

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            LC++G  ++A RL  K+ + D    N+ TY A++SG C++  ++ A  LL  M+  G  
Sbjct: 301 SLCQEGLFQRAIRLLEKMSKHD-CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCK 359

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY  L+ G C    +E A DLM  M +  C P+I  +N II  LC+KG   +A E+
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEV 419

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            K+  ++    + +TY+ ++    K  + +Q+L L   M   G NP+I+ Y  L      
Sbjct: 420 FKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNE 478

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           + K+ E+ +   +    G+ P    Y +++ G  R+G    A+     M   GC PD  T
Sbjct: 479 EDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDEST 538

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGI 573
           Y  LI GL  +  + EA +   ++  + +
Sbjct: 539 YSILIQGLAHEGYMKEARELLSTLSSRDV 567



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 184/374 (49%), Gaps = 5/374 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           ++   ++  M   G      T N ++   C  G V+YA E+ + + + G   +  +Y  +
Sbjct: 204 RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           +      GR  + +  ++ M         ATL+++I++ C +G     ++A  LLE+M +
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGL---FQRAIRLLEKMSK 320

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
                N+ T+  ++ GLC++G  + A  L L  +++D  KPN+ TY  ++ G C  E+  
Sbjct: 321 HDCTANIVTYNAVVSGLCEQGHVDGALYL-LSNMQTDGCKPNIFTYNILVKGLCNAERWE 379

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            AE L+ +M +   LP+  T+ ++I   C+ G   +A ++   M ++GC PN   Y+++I
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVI 439

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
           +GL K G+++++ ELL +   +    + I Y +L     ++ +  +A+ +  ++   G++
Sbjct: 440 EGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGIS 498

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P    Y T++   CR  K  ++       ++ G  P + TY+ +I G   +G +  A + 
Sbjct: 499 PQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAREL 558

Query: 530 FQRMNQIGCAPDNI 543
              ++      DN+
Sbjct: 559 LSTLSSRDVIVDNL 572



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 5/291 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
           N   +   +  ++SS  + G  +    ++ +M+ +       T N VV   CE G V+ A
Sbjct: 287 NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGA 346

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
             +   M   G   +  +Y ++V   C   R  +A+  ++ M     + D  T   +I  
Sbjct: 347 LYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGF 406

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
            C KG      QA E+ ++M  KG  PN  T++ +I+GL K G  E++  L L  + S  
Sbjct: 407 LCQKGL---TMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLEL-LNEMGSKG 462

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P ++ Y  +     +E+K+  A  ++ ++++ G+ P    Y +++ G C+ G  ++A 
Sbjct: 463 FNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           D++  M  +GC P+   Y+ +I GL  +G ++EA ELL     R++  D +
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNL 572


>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 376

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 190/381 (49%), Gaps = 5/381 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+   ++ AE V+ EM    +  DA  Y  M+  Y R+GR+ +       M   G   + 
Sbjct: 1   CDSEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGG-QNV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            +  +++    +    G + +A  + E M + G+  +  TH +LIDG CK G+  K+ R+
Sbjct: 60  ISFNIMMRGLFN---NGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L++        N   Y+AMI+G C+E K+++A  +L  M + G  PN + Y  LI G  
Sbjct: 117 -LEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFV 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               F  A  +   MG   C+P I  YN +I+GLCK  R  EAY+L+K+  ++  +   I
Sbjct: 176 GASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+    +  + + A+ L+ +++  GL PD+  +  LI   C   K + +   + + 
Sbjct: 236 TYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDM 295

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ +++ G+ +DG+I +A+  + R+ + G  PD ++Y   + GLC  +++
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRI 355

Query: 559 DEACQFYESMIGKGISPCEVT 579
             A  F    +   I+P  +T
Sbjct: 356 SFANLFLXDALANAIAPTXIT 376



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 175/364 (48%), Gaps = 5/364 (1%)

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            I  A  + +EMV     P+   +  +++G  + G  +  F L+ +L+ ++  + NV ++
Sbjct: 5   DIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELW-ELMGTEGGQ-NVISF 62

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             M+ G     ++++A  + E MK+ G + ++ T+  LI G CK G   ++  ++++  +
Sbjct: 63  NIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEE 122

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +G   N +AY+A+I+GLC++ ++ +A  +L    +   + +   Y IL++  +  ++   
Sbjct: 123 KGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYD 182

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ +F  M     +P I  Y TLI   C+ ++  E+    +E +  G  P   TY+ +I 
Sbjct: 183 AIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIK 242

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  +   +  A++ + ++   G  PD   +  LI GLC   K   A   Y  M     +P
Sbjct: 243 GLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAP 302

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
             VT  TL   + K GD   A++I   + +      I + N  ++ LCS  R+  A LF 
Sbjct: 303 NLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFL 362

Query: 633 HKLL 636
              L
Sbjct: 363 XDAL 366



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 33/240 (13%)

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P+   YNA+++G  + GR+++ +EL +     E   + I++ I++       E  +A+ 
Sbjct: 22  SPDAVVYNAMLNGYFRVGRIKDCFELWE-LMGTEGGQNVISFNIMMRGLFNNGEVDKAIS 80

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  M K+G   D   +  LI  FC+   + +S +  + A   G       Y++MI G  
Sbjct: 81  IWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFAYSAMINGLC 140

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           R+  +  A      M + G  P+   Y  LI+G    SK  +A + ++ M   G + C  
Sbjct: 141 REAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEM---GSTDCSP 197

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           T                             I T NTLI  LC  +R   A     ++L K
Sbjct: 198 T-----------------------------IVTYNTLINGLCKGERFAEAYDLVKEMLEK 228


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 219/490 (44%), Gaps = 42/490 (8%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G ++ A ++F  M  RG+  D  +Y  ++  Y + G +    +  S  L +G  LD 
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
              +  I  +   G    +  A  + + M+ +G  PNV T+T+LI GLC+ G   +AF +
Sbjct: 357 VVFSSTIDVYVKSG---DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + ++++    +P++ TY+++I G+CK   +     L E M + G  P+   Y  L+ G  
Sbjct: 414 YGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G    A      M  +    N+  +N++IDG C+  R  EA ++ +      ++ D  
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK----------- 487
           T+T ++   + +   ++AL LF RM K GL PD  AY TLI AFC+  K           
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592

Query: 488 ------------------------MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
                                   ++++ KFF   I   + P   TY +MICGY     +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A + F+ +      P+ +T   LI  LCK + +D A + +  M  KG  P  VT   L
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712

Query: 584 AYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
              + K  D   +  + E + +K     I + + +I  LC   RV  A   FH+ +    
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 772

Query: 641 NVDRVSLAAL 650
             D V+ A L
Sbjct: 773 LPDVVAYAIL 782



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 210/480 (43%), Gaps = 39/480 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + + G L  G  +  +  + G+ L     +  + +  + G +  A  V+  M  +G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y +++   C+ GR+ EA      +L RG      T + LI  FC  G   +++
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG---NLR 443

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F L E+M++ G+ P+V  + VL+DGL K+G    A R  +K++   + + NV  + ++
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML-GQSIRLNVVVFNSL 502

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C+  + + A  +   M   G+ P+  T+T+++      G  E A  L   M K G 
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+  AY  +ID  CK  +     +L     + ++ AD     +++    K    + A  
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  +++  + PDI  Y T+I  +C  +++ E+E+ F+        P   T T +I    
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGAL------------------------------ 548
           ++ ++  A++ F  M + G  P+ +TYG L                              
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742

Query: 549 -----ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
                I GLCK+ ++DEA   +   I   + P  V    L   YCK G    A ++ E +
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 154/631 (24%), Positives = 271/631 (42%), Gaps = 77/631 (12%)

Query: 94  SLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAH 153
           +L   +   V+ SL +E  S  AL +F WA    K   F  +    A  LI NG F+ A 
Sbjct: 66  NLQRNETNLVLLSLESEPNS--ALKYFRWAEISGKDPSFYTI----AHVLIRNGMFDVAD 119

Query: 154 EVMQCMVSS----FAEIGRLKE-----------------------GFSMVIEMTNNGLPL 186
           +V   M+++    F  +G +++                          + +  T  G+ +
Sbjct: 120 KVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVI 179

Query: 187 ITSTLNRVVGIACELGLVEYAEEVFDEMCARGV-CADASSYKLMVVAYCRMGRVTEA--- 242
              ++ R++        V+   + FD++C  G+  +  S++  ++ A    G VT+A   
Sbjct: 180 PQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239

Query: 243 -------------------------------DRWLSAMLDRGAILDNATLTLLITAFCDK 271
                                           R LS +LD G   +  T   LI  FC  
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCK- 298

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
             RG + +AF+L + M ++G +P++  ++ LIDG  K G      +LF + +     K +
Sbjct: 299 --RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK-GVKLD 355

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           V  +++ I  Y K   +  A ++ +RM  QG+ PN  TYT LI G C+ G    A+ +  
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            + K G  P+I  Y+++IDG CK G ++  + L +   +     D + Y +L+    KQ 
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A+    +M+   +  ++  + +LI  +CR  +  E+ K F+     G+ P   T+T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM--- 568
           +++   + +G +  A+  F RM ++G  PD + Y  LI   CK  K     Q ++ M   
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595

Query: 569 -IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGM 627
            I   I+ C V  + L ++  +  D++     L     +  I T NT+I   CS +R+  
Sbjct: 596 KISADIAVCNVV-IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654

Query: 628 AALFFHKLLGKDQNVDRVSLAALKNACYESN 658
           A   F  L       + V+L  L +   ++N
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNN 685



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 227/487 (46%), Gaps = 24/487 (4%)

Query: 202 GLVEYAEEVFDEMCA------------RGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           G+ + A++VFDEM              R    DA   K ++   CR G V +A       
Sbjct: 113 GMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYS 172

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN-VYTHTVLIDGLCK 308
              G ++   ++  ++ +         I   F+   ++ R G +P+ V  H  ++D L  
Sbjct: 173 TQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFD---KLCRGGIEPSGVSAHGFVLDALFC 229

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
           KG   KA   F +LV    ++  + +   ++ G    +++  A  LL  + + G  PN  
Sbjct: 230 KGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVV 287

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           T+ +LI G CK G  +RA+DL  +M + G  P++ AY+ +IDG  K G +   ++L  +A
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
             + ++ D + ++  +  ++K  +   A  ++ RM+  G++P++  YT LI   C+  ++
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+   + + +  G+ P+  TY+S+I G+ + GN+ S    ++ M ++G  PD + YG L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DK 605
           + GL KQ  +  A +F   M+G+ I    V   +L   +C+      A+ +   +     
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYAL--- 662
           K  + T  T++R    E R+  A   F ++       D ++   L +A  +  K  +   
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587

Query: 663 FSDLSQR 669
             DL QR
Sbjct: 588 LFDLMQR 594



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 165/381 (43%), Gaps = 37/381 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + G L+ GF++  +M   G P        +V    + GL+ +A     +M  + 
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +   +  ++  +CR+ R  EA +    M   G   D AT T ++         G ++
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV---SIMEGRLE 548

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD------------ 326
           +A  L   M + G +P+   +  LID  CK        +LF  + R+             
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608

Query: 327 ----------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
                                   +P++ TY  MI GYC   +++ AE + E +K     
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PNT T T LI+  CK  + + A  +  +M ++G  PN   Y  ++D   K   ++ +++L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            ++  ++ +    ++Y+I++    K+    +A  +F + + A L PD+ AY  LI  +C+
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788

Query: 485 QKKMKESEKFFQEAITAGLFP 505
             ++ E+   ++  +  G+ P
Sbjct: 789 VGRLVEAALLYEHMLRNGVKP 809



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 48/101 (47%)

Query: 158 CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           C++  F++   ++  F +  EM   G+     + + ++   C+ G V+ A  +F +    
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
            +  D  +Y +++  YC++GR+ EA      ML  G   D+
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 209/433 (48%), Gaps = 5/433 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    E G  ++ + +  +M ++GL   T+  N V+       L + A  +F EM   G
Sbjct: 323 LIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  DA +Y +++   C+  ++ EA      M + G      T   L+  +C     G + 
Sbjct: 383 I-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC---VNGCMD 438

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L  EM  KG+ PNV T+T L+ G   K   +KA+ L  ++ + +    N +TY  +
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM-KQNGVSCNDYTYNTL 497

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G C   ++     +L+R + +G +P   TY S+I G  K G    A+ +   M  +G 
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            PNI  Y + IDG CK      A ++L     + L+ D   Y  L+    ++     AL 
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +   M+K GL P+I  Y + I  +   K M+E+ + +++ I  G+     TYT++I G+ 
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFS 677

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +DGN++ A+K +  M   G  PD+IT+ AL  GLC+   +D+A +  + M    I P  +
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737

Query: 579 TRVTLAYEYCKQG 591
               L   Y + G
Sbjct: 738 MYNMLINGYLRNG 750



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 210/410 (51%), Gaps = 5/410 (1%)

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
           K+  S+  EM ++G+P    T N ++   C+   +  A  ++++M   GV     +Y  +
Sbjct: 369 KDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
           ++ YC  G + EA +  + M  +G   +  T T L+    +K    +  +A+ LL EM +
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA---AFDKAYALLAEMKQ 484

Query: 290 KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMN 349
            G   N YT+  LI+GLC  G   +   + LK   ++ + P   TY ++I+G+ K   M 
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEM-LKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
            A  + ++M  +G+ PN  TYTS I G+CK    + A  +++ +  +G  P+I AYN++I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
            G C++G +  A ++L    +  L  +   Y   ++ +      ++AL L+ +M+K G++
Sbjct: 604 FGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGID 663

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
            D   YTTLI  F +   +  + K + E +  G  P   T+T++  G  R+G+I  A K 
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
              MN++   P+ + Y  LI+G  +  KL EA + ++ M+ + I P + T
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 201/437 (45%), Gaps = 5/437 (1%)

Query: 169 LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
           +++   +  E   +GL     T   ++    E G+ E A E+  +M   G+    + + +
Sbjct: 298 VRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNM 357

Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
           ++          +A      M D G I D  T  +LI   C    R  I++A  L E+M 
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQ---RRKIREALNLWEKMN 413

Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
             G KP + T+  L+   C  G  ++A +L+ ++     + PNV TYT ++ G+  +   
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM-PGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
           ++A  LL  MK+ G+  N  TY +LI G C VG      +++     EG  P    YN+I
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
           I+G  K G +  A+ + ++   + +  + +TYT  +  + K +    AL +   +   GL
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            PDI AY +LI  FC++  M  + +     +  GL P    Y S I GY     +  A++
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +++M + G   D  TY  LI G  K   +  A + Y  M+ KG  P  +T   L +  C
Sbjct: 653 LYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 589 KQGDSATAMIILESLDK 605
           + GD   A  +L+ +++
Sbjct: 713 RNGDIDDARKLLDEMNR 729



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 201/439 (45%), Gaps = 5/439 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    + GR++E   +  E+   G  +       ++   C    V  A ++F+E    G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +     +Y +++      G   +A      M D G +       ++I    +       K
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL---WK 369

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  L +EM   G  P+ +T+ +LI  LC++    +A  L+ K+  +   KP + TY ++
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSL 427

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           +  YC    M+ A  L   M  +G  PN  TYT+L+ GH     F++AY L+  M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           + N Y YN +I+GLC  GRV E  E+LK+          +TY  +++  +K      A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++ +M   G+ P+I  YT+ I  +C+      + K   +    GL P    Y S+I G+ 
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFC 607

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           ++GN+S A++    M + G  P+   Y + I+G      ++EA + YE MI +GI     
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTA 667

Query: 579 TRVTLAYEYCKQGDSATAM 597
           T  TL   + K G+   A+
Sbjct: 668 TYTTLIDGFSKDGNVTFAL 686



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 177/382 (46%), Gaps = 4/382 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           +++E  ++  +M   G+     T + ++   C  G ++ A +++ EM  +G   +  +Y 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  +       +A   L+ M   G   ++ T   LI   C     G + +  E+L+  
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC---VVGRVCEVGEMLKRF 517

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             +G+ P   T+  +I+G  K G    AF ++ ++  +    PN+ TYT+ I GYCK   
Sbjct: 518 ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC-AKGIPPNIVTYTSFIDGYCKTSC 576

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
            + A  +L  ++ +GL P+   Y SLI+G C+ GN   A  ++ LM K+G  PNI  YN+
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
            I G      ++EA  L +K  +  +  D  TYT L+    K      AL L+  MV  G
Sbjct: 637 FITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD   +T L    CR   + ++ K   E     + P    Y  +I GYLR+G +  A 
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756

Query: 528 KYFQRMNQIGCAPDNITYGALI 549
           +    M +    PD+ TY  L+
Sbjct: 757 RLHDEMLERKIMPDDTTYDILV 778



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 227/511 (44%), Gaps = 43/511 (8%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM- 236
           EM   G PL     + V+    + G+ + A  +FDEM A  +  D     + + + C++ 
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 237 ----------------------------------GRVTEADRWLSAMLDRGAILDNATLT 262
                                             GR+ EA      +L  G  +     T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            L+  +C    +  +++A ++ EE +R G  P   T+TVLI G  ++G  EKA+ L  + 
Sbjct: 287 TLMHGYC---LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYEL-CRQ 342

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +R     P+ + +  +I G   ++    A  L + M + G +P+  TY  LI+  C+   
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
              A +L + M + G  P I  Y++++   C  G + EA +L  +   +    + +TYT 
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  H+ +A   +A  L   M + G++ + + Y TLI   C   ++ E  +  +   T G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
             PT  TY S+I G+++ G + SA   +Q+M   G  P+ +TY + I G CK S  D A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKL 619
           +    +  KG+ P      +L + +C++G+ + A+ +L  + K   +  +   N+ I   
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            + K +  A   + K++ +  ++D  +   L
Sbjct: 642 KNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 188/428 (43%), Gaps = 8/428 (1%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M ARGV  DA S   ++    R     +A   L+ M  +G  LD     +++ A C K  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRA-CFK-- 189

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G    A  L +EM     +P+    +V I  LCK     +A  L L+ ++   + P   
Sbjct: 190 EGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL-LVLRKMQDAGFVPWDF 248

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           T+ +++    K  +M  A  + + +   G   +    T+L++G+C      +A D+ +  
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P    Y  +I G  ++G  ++AYEL ++     L      + +++   L     
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K A+ LF  M  +G+ PD   Y  LI   C+++K++E+   +++    G+ P   TY S+
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  Y  +G +  AVK +  M   G  P+ +TY  L+ G   ++  D+A      M   G+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAAL 630
           S  + T  TL    C  G       +L+  + + ++ T    N++I        +G A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 631 FFHKLLGK 638
            + ++  K
Sbjct: 548 VYQQMCAK 555



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 5/150 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V    ++ +  +  ++E   +  +M   G+ L T+T   ++    + G V +A +++ EM
Sbjct: 633 VYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGF 273
            A+G   D  ++  +    CR G + +A + L  M +R  I  N  +  +LI  +     
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRN-- 749

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
            G +++AF L +EM+ +   P+  T+ +L+
Sbjct: 750 -GKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 201/400 (50%), Gaps = 10/400 (2%)

Query: 179 MTNNGLPLITSTLNR---VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           M   G  ++T T++    ++G  C  G ++        +  +G   +   +  ++   C 
Sbjct: 78  MARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCA 137

Query: 236 MGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK- 293
             R  +A D  L  M +   + +  + T+++   C +      ++A ELL  M   G   
Sbjct: 138 DKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRS---QEALELLHMMADDGGGC 194

Query: 294 -PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            PNV +++ +IDGL K G  +KA+  + +++      PNV  Y+++I+  CK + M++A 
Sbjct: 195 LPNVVSYSTVIDGLLKGGDPDKAYATYREML-DRRILPNVVIYSSIIAALCKGQAMDKAM 253

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            + +RM + G+ PN  TYTSL++G C  G    A   ++ M   G  PN+  Y++ +D L
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           CK GR  EA ++     +R L+ D  TY+ LL  +  +    +  GLF  MV++ + PD 
Sbjct: 314 CKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
           + + TLI A  +Q K+ E+   F +    GL P   TY+++I GY +   + +A+  FQ 
Sbjct: 374 YVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQE 433

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           M   G +P+ ITY  ++ GL +  +   A +FY  +I  G
Sbjct: 434 MVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 200/436 (45%), Gaps = 46/436 (10%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G  E A +VFDE+  RG+ A   S    +    R        R+ + M   GA +   T+
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRF-NRMARAGASMVTPTV 90

Query: 262 ---TLLITAFCDKGFRGSIKQAFELLEEMVRKGWK------------------------- 293
               +LI   C  G    +   F  L  +V+KG++                         
Sbjct: 91  HTYGILIGCCCSAG---RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147

Query: 294 -----------PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTYTAMIS 340
                      PNV++HT+++ GLC +  +++A  L L ++  D     PNV +Y+ +I 
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALEL-LHMMADDGGGCLPNVVSYSTVID 206

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           G  K    ++A      M ++ +LPN   Y+S+I   CK    ++A ++ D M K G TP
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N + Y +++ G C  G++ EA + L+K     ++ + +TY+  +    K     +A  +F
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIF 326

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             MVK GL PDI  Y++L+  +  +  + E    F   + + + P    + ++I    + 
Sbjct: 327 DSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G +  A+  F +M Q G  P+ +TY  LI+G CK ++++ A   ++ M+  G+SP  +T 
Sbjct: 387 GKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITY 446

Query: 581 VTLAYEYCKQGDSATA 596
             +     + G +ATA
Sbjct: 447 NIMLQGLFRTGRTATA 462



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN--YKPNV 332
           G  + A ++ +E++R+G    + +    +  + +        R F ++ R+      P V
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSR-FNRMARAGASMVTPTV 90

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           HTY  +I   C   +++     L  + ++G       +  L+ G C     +R  D MD+
Sbjct: 91  HTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCAD---KRTDDAMDI 147

Query: 393 ----MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
               M +  C PN++++  I+ GLC + R QEA ELL       + AD            
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELL------HMMADD----------- 190

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
                             G  P++ +Y+T+I    +     ++   ++E +   + P   
Sbjct: 191 ----------------GGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVV 234

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+S+I    +   +  A++   RM + G  P+  TY +L+ G C   +L EA +F E M
Sbjct: 235 IYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKM 294

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
              G+ P  VT  +     CK G    A  I +S+ K+
Sbjct: 295 CSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKR 332



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 4/183 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F   G+L E    + +M +NG+     T +  +   C+ G    A ++FD M  RG
Sbjct: 274 LVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRG 333

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D ++Y  ++  Y   G + E       M+      D+     LI A      +G + 
Sbjct: 334 LKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYA---SAKQGKVD 390

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  +  +M ++G KPN  T++ LI+G CK    E A  LF ++V S+   PN  TY  M
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMV-SNGVSPNFITYNIM 449

Query: 339 ISG 341
           + G
Sbjct: 450 LQG 452



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 51/112 (45%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
            L+   + +  H V   ++ + A+ G++ E   +  +M   GL     T + ++   C++
Sbjct: 362 DLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKI 421

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
             +E A  +F EM + GV  +  +Y +M+    R GR   A  +   ++  G
Sbjct: 422 TRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 5/383 (1%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N++  + C+ G V+ A      M  +G+  +   Y  M++A+CRM  +  A    S ML+
Sbjct: 453 NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQ-AFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
           +G   +N T ++LI  F    F+   +Q A+E++ +M+   ++ N   +  +I+GLCK G
Sbjct: 513 KGLQPNNFTYSILIDGF----FKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVG 568

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            T KA  +   L++   Y     +Y ++I G+ KE   + A      M E G+ PN  T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTF 628

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           TSLI G CK    + A +++  M  +    ++ AY A+IDG CKK  ++ AY L  +  +
Sbjct: 629 TSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE 688

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
             L  +   Y  L+S      +   A+ L+ +MV  G++ D+  YTT+I    +   +  
Sbjct: 689 LGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLIL 748

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   + E +  G+ P +  Y  ++ G  + G    A K  + M +    P+ + Y  +I+
Sbjct: 749 ASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIA 808

Query: 551 GLCKQSKLDEACQFYESMIGKGI 573
           G  ++  L+EA + ++ M+ KG+
Sbjct: 809 GHHREGNLNEAFRVHDEMLEKGL 831



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 245/517 (47%), Gaps = 30/517 (5%)

Query: 96  THEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLIS---NGN---- 148
           + E   +V+ +   E     A+      +GF      + + ++ ATSLI+   NGN    
Sbjct: 309 SQETYTSVIVACVKEGNMEEAVKVKDEMVGFG-----IPMSVIAATSLITGFCNGNELGK 363

Query: 149 ----FERAHE--------VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
               F R  E        +   M+  F +   +++   +   M + G+   +  +++++ 
Sbjct: 364 ALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQ 423

Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
              +    E A E+F++     +       K+ ++  C+ G+V  A  +L  M ++G   
Sbjct: 424 GCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL-LCKQGKVDAATSFLRMMENKGIEP 482

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           +      ++ A C      ++  A  +  EM+ KG +PN +T+++LIDG  K    + A+
Sbjct: 483 NVVFYNNMMLAHCR---MKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAW 539

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIY 375
            +  +++ S N++ N   Y  +I+G CK  + ++A EML   +KE+       +Y S+I 
Sbjct: 540 EVINQMIAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIID 598

Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
           G  K G+ + A +    M + G +PN+  + ++I+G CK  R+  A E++ +   ++L+ 
Sbjct: 599 GFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKL 658

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D   Y  L+    K+ + K A  LF  +++ GL P++  Y  LI+ F    KM  +   +
Sbjct: 659 DVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLY 718

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           ++ +  G+     TYT+MI G L+DGN+  A   +  +  +G  PD I Y  L++GL K+
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKK 778

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
            +   A +  E M  K  +P  +   T+   + ++G+
Sbjct: 779 GQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGN 815



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 234/503 (46%), Gaps = 17/503 (3%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
           F+++++   N +P +   +N V+       L++ A+E++++M   GV  D  + +L++ A
Sbjct: 192 FNLMVD--RNVVPFVP-YVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRA 248

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
             R  +  EA +    ++ RGA  D    +L + A C       +  A +LL EM  KG 
Sbjct: 249 SLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACK---MKDLVMALDLLREMREKGG 305

Query: 293 KP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
            P +  T+T +I    K+G  E+A ++  ++V       +V   T++I+G+C   ++ +A
Sbjct: 306 VPASQETYTSVIVACVKEGNMEEAVKVKDEMV-GFGIPMSVIAATSLITGFCNGNELGKA 364

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
                RM+E+GL P+   ++ +I   CK    E+A ++   M   G  P+    + +I G
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
             K    + A E+   +F+  +    +   I L    KQ +   A      M   G+ P+
Sbjct: 425 CLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL-LCKQGKVDAATSFLRMMENKGIEPN 483

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y  ++ A CR K M  +   F E +  GL P   TY+ +I G+ ++ +  +A +   
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVIN 543

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG-KGISPCEVTRVTLAYEYCKQ 590
           +M       + + Y  +I+GLCK  +  +A +  +++I  K  S    +  ++   + K+
Sbjct: 544 QMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKE 603

Query: 591 GDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
           GD+ +A+     + +      + T  +LI   C   R+ +A    H++  KD  +D  + 
Sbjct: 604 GDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAY 663

Query: 648 AALKNACYESNK----YALFSDL 666
            AL +   + N     Y LFS+L
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSEL 686



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 5/304 (1%)

Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEY 206
           NFE    +   +++   ++G+  +   M+  +       +  ++ N ++    + G  + 
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDS 608

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           A E + EM   G+  +  ++  ++  +C+  R+  A   +  M  +   LD      LI 
Sbjct: 609 AVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALID 668

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
            FC K     +K A+ L  E++  G  PNV  +  LI G    G  + A  L+ K+V +D
Sbjct: 669 GFCKKN---DMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMV-ND 724

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
               ++ TYT MI G  K+  +  A  L   +   G++P+   Y  L+ G  K G F RA
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRA 784

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +++ M K+  TPN+  Y+ +I G  ++G + EA+ +  +  ++ L  D   + +L+S 
Sbjct: 785 SKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844

Query: 447 HLKQ 450
            +++
Sbjct: 845 RVEK 848



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 40/311 (12%)

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           +  +  L+  + +    + A D  +LM      P +   N ++  L +   + EA E+  
Sbjct: 169 SRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYN 228

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           K     +  D +T  +L+   L++ + ++A+ +F R++  G  PD   ++  + A C+ K
Sbjct: 229 KMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMK 288

Query: 487 KMKESEKFFQEAITAGLFP-TKETYTSMICGYLRDGNISSAVK----------------- 528
            +  +    +E    G  P ++ETYTS+I   +++GN+  AVK                 
Sbjct: 289 DLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAA 348

Query: 529 ------------------YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
                             +F RM + G APD + +  +I   CK  ++++A + Y+ M  
Sbjct: 349 TSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKS 408

Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGM 627
            GI+P  V  V    + C + +S  A + + +   + WI      N +   LC + +V  
Sbjct: 409 VGIAPSSVL-VHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDA 467

Query: 628 AALFFHKLLGK 638
           A  F   +  K
Sbjct: 468 ATSFLRMMENK 478


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 39/432 (9%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR++E + ++ EM +  L     T+N +V   C+   +E A ++F+    RG   D  +Y
Sbjct: 268 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 327

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++    + G+V EA R    MLD G   +    T LI  F      G  +   ++ +E
Sbjct: 328 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF---IHGRKEDGHKVFKE 384

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT---------- 336
           ++R+G KP++      +D + K G  EK  R+  + +RS  + P+V +Y+          
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443

Query: 337 -------------------------AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                                    A++ G+CK  K+++A  +LE MKE+ + P   TY 
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 503

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +++ G  K+   + AY L +    +G   N+  Y+++IDG  K GR+ EAY +L++  ++
Sbjct: 504 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 563

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            L  +  T+  LL   +K  E  +AL  F  M +    P+ + Y+ LI   CR +K  ++
Sbjct: 564 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 623

Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
             F+Q+    GL P   TYT+MI G  + GNI+ A   F+R    G  PD  ++ ALI G
Sbjct: 624 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 683

Query: 552 LCKQSKLDEACQ 563
           +   ++  EA Q
Sbjct: 684 MSNANRAMEAYQ 695



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 234/498 (46%), Gaps = 23/498 (4%)

Query: 145 SNGNFERAHEVMQ------CM--VSSFAEI-------GRLKEGFSMVIEMTNNGLPLITS 189
           S G FE A+++++      C+  V SF  I        ++ E  S+   M  +  P  +S
Sbjct: 197 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSS 255

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C  G VE A  + DEM    +  +  +  +MV   C+  ++ EA +   + 
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             RG   D  T   LI      G +G + +A+ L E+M+  G   N   +T LI      
Sbjct: 316 SQRGCNPDCVTYCSLIDGL---GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E   ++F +L+R    KP++      +    K  ++ +  M+ E ++  G LP+  +
Sbjct: 373 GRKEDGHKVFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 431

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+G  K G      ++   M ++G   +  AYNA++DG CK G+V +AYE+L++  
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ +Q    TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ 
Sbjct: 492 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 551

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+ S++   ++   I+ A+  FQ M ++ C P+  TY  LI
Sbjct: 552 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 611

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
           +GLC+  K ++A  F++ M  +G+ P  VT  T+     K G+   A  + E       I
Sbjct: 612 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 671

Query: 610 ---RTVNTLIRKLCSEKR 624
               + N LI  + +  R
Sbjct: 672 PDAASFNALIEGMSNANR 689



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 215/479 (44%), Gaps = 8/479 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F + G +        E+   GL     +   ++ + C+ G +  AEE+F +M A   
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y   GR  +A + L  + +RG I    +   ++T     G +  + +
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDE 238

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L E M +K  +PN  T+ ++ID LC  G  E+A+R+  ++  +  + PN+ T   M+
Sbjct: 239 ALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF-PNLLTVNIMV 296

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK  K+  A  + E   ++G  P+  TY SLI G  K G  + AY L + M   G  
Sbjct: 297 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 356

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
            N   Y ++I      GR ++ +++ K+  +R  + D       +    K  E ++   +
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   G  PD+ +Y+ LI    +  + +E+   F      G       Y +++ G+ +
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 476

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G +  A +  + M +    P   TYGA++ GL K  +LDEA   +E    KGI    V 
Sbjct: 477 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 536

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L   + K G    A +ILE + KK     + T N+L+  L   + +  A + F  +
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 4/310 (1%)

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           +  +++ A + +  M+     P  + YT LI    +    ERA +L+  M + G    ++
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +  ++  L ++G+V +A  L+ +     L+ D + Y + +    K      A   F  +
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              GL PD  +YT++I   C+  ++ E+E+ F +       P    Y +MI GY   G  
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A K  +R+ + GC P  +++ ++++ L K+ K+DEA   +E M  K   P   T   +
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNII 260

Query: 584 AYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
               C  G    A  IL+ ++       + TVN ++ +LC  +++  A   F     +  
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 641 NVDRVSLAAL 650
           N D V+  +L
Sbjct: 321 NPDCVTYCSL 330


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 190/359 (52%), Gaps = 6/359 (1%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRM-GRVTEADRWLSAMLDRGAILDNATLTLLI 265
           A E+FDEM  RG+     +Y  ++ A CR  G V +A      M+ +    +  T T +I
Sbjct: 170 AWELFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMI 228

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            A C++G  G  ++ F+ ++E    G +PN YT+ VL+ G C++     A  L+ +L++S
Sbjct: 229 CALCEEGCIGDAERLFDAMKE---AGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKS 285

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
               PN   +T +I G+CK ++ + A+ +   M   G+ P    Y SL+ G  + GN + 
Sbjct: 286 -GLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQE 344

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  L   M + G  P+ +  + ++ GLC  G++  A   L+   +  +  +   Y  L+ 
Sbjct: 345 ALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALID 404

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
           E+ +    ++AL    RM + G+ P++ +Y++LI    ++ KM+ +   + E +  G+ P
Sbjct: 405 EYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEP 464

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
              TYT++I G+ ++G I +A +  + M + G +P+ IT   L+ GLC+++++ EA +F
Sbjct: 465 NVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF 523



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 196/423 (46%), Gaps = 20/423 (4%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ--- 279
           A +  ++V+A  +MG           +LD    +     TL     C+    G +K    
Sbjct: 119 APALGVLVIALSQMG-----------LLDEALYVFRRLRTLPALPACNAVLDGLVKARRP 167

Query: 280 --AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A+EL +EM+R+G  P+V T+  LI+    +G   KA  ++ ++V +    PNV TYT 
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMV-AQQIDPNVVTYTT 226

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI   C+E  +  AE L + MKE G+ PN  TY  L+ GHC+  +   A  L   + K G
Sbjct: 227 MICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG 286

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   +  +IDG CK  R  EA  +  +  +  +      Y  L+    +    ++AL
Sbjct: 287 LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEAL 346

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L+  M + GL PD    + ++   C   +M  +++F Q     G+      Y ++I  Y
Sbjct: 347 ALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEY 406

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            R GN+  A+    RM ++G  P+ ++Y +LI G  K+ K+  A   Y  M+ KGI P  
Sbjct: 407 CRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNV 466

Query: 578 VTRVTLAYEYCKQGDSATAMII-LESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHK 634
           VT   L + + K G    A  +  E ++  +     TV+ L+  LC E RV  A  F  +
Sbjct: 467 VTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526

Query: 635 LLG 637
             G
Sbjct: 527 YSG 529



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 204/450 (45%), Gaps = 56/450 (12%)

Query: 178 EMTNNGLPLITSTLNRVVGIACEL-GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
           EM   GL     T N ++  AC   G V  A+EV+D+M A+ +  +  +Y  M+ A C  
Sbjct: 176 EMLRRGLVPSVVTYNTLIN-ACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEE 234

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G + +A+R   AM + G   +  T  +L++  C    R  +  A  L +E+++ G  PN 
Sbjct: 235 GCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ---RDDVNSAVVLYQELLKSGLNPNA 291

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKL-------------------VRSDNYK-------- 329
              T LIDG CK     +A  +FL++                    RS N +        
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351

Query: 330 -------PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                  P+  T + ++ G C   +M+ A+  L+ ++E G+  N   Y +LI  +C++GN
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A      M + G  PN+ +Y+++IDG  K+G++Q A  +  +   + ++ + +TYT 
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE----- 497
           L+  H K      A  L   M++ G++P+    + L+   CR+ +++E+ +F  E     
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531

Query: 498 -----AITAG-------LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
                ++ +        L P    Y ++I G   DG    A K F  M + G  PD+ TY
Sbjct: 532 CSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591

Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISP 575
             LI G C    +  A   Y  M+  G+ P
Sbjct: 592 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 162/393 (41%), Gaps = 85/393 (21%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G +  AE +FD M   G+  +  +Y +++  +C+   V  A      +L  G   + 
Sbjct: 232 CEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNA 291

Query: 259 ATLTLLITAFC-------------------------------DKGFR-GSIKQAFELLEE 286
              T LI  FC                               D  FR G+ ++A  L +E
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY------------------ 328
           M R G  P+ +T ++++ GLC  G    A R FL+ V+ D                    
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADR-FLQGVQEDGVNLNAAAYNALIDEYCRIG 410

Query: 329 -----------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
                            +PNV +Y+++I G+ K  KM  A  +   M  +G+ PN  TYT
Sbjct: 411 NLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYT 470

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA------YELL 425
           +LI+GH K G  + A+ L   M + G +PN    + ++DGLC++ RVQEA      Y  L
Sbjct: 471 ALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGL 530

Query: 426 K--------KAFQRE---LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           K          F  E   L  + + Y  L+       +  +A  LF  M K+G+ PD   
Sbjct: 531 KCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFT 590

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           YT LI   C    +  +   + + +  G+ PT+
Sbjct: 591 YTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTR 623



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 152/333 (45%), Gaps = 21/333 (6%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++  F +  R  E   M +EM   G+       N ++  A   G  + A  ++ EM
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G+C D  +  ++V   C  G++  ADR+L  + + G  L+ A    LI  +C     
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI--- 409

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G++++A      M   G +PNV +++ LIDG  K+G  + A  ++ ++V +   +PNV T
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMV-AKGIEPNVVT 468

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD-LMDLM 393
           YTA+I G+ K   ++ A  L + M E G+ PN  T + L+ G C+    + A   +M+  
Sbjct: 469 YTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYS 528

Query: 394 G----------------KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           G                +E   PN   Y  +I GL   G+  EA +L     +  +  D 
Sbjct: 529 GLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDS 588

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            TYT+L+           A+ L+  M+K G+ P
Sbjct: 589 FTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 211/449 (46%), Gaps = 39/449 (8%)

Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           M CM       G+++E + +  EM + GL     T+N +V   C+    E A E+F+   
Sbjct: 400 MLCMA------GKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR- 274
            RG   ++ +Y  ++    + G V +A R    MLD G   +    T LI  F   G + 
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 275 -------------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
                                          G +++   + E++   G+ P+V ++++LI
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GL K G   +   +F   ++   +  +   Y A++ G+CK  K+++A  +LE MK + +
Sbjct: 574 HGLTKAGQARETSSIF-HAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV 632

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P   TY S+I G  K+   + AY L +    +G   N+  Y+++IDG  K GR+ EAY 
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +L++  ++ L  +  T+  L+   +K  E  +AL  F  M +   +P+ + Y+ LI   C
Sbjct: 693 ILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLC 752

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R +K  ++  F+QE    GL P   TYT+MI G  + GNI+ A   F+R    G  PD  
Sbjct: 753 RVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKG 572
           ++ ALI G+   ++  EA   +E    KG
Sbjct: 813 SFNALIEGMSHANRAIEAYHVFEETRLKG 841



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 229/529 (43%), Gaps = 23/529 (4%)

Query: 128 KFRHFMRLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEG 172
           KFR     Y V   ++      ERA E+++ M               V + A  GR++  
Sbjct: 177 KFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGA 236

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
            ++V E+  + L       N  +    + G V+ A + F E+ ++G+  D  SY  M+  
Sbjct: 237 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWV 296

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            C+ GR++EA+     M    A+        +I  +   G  G  + A++LL+++  +G 
Sbjct: 297 LCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY---GSAGQFENAYKLLDQLKERGC 353

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
            P+V +   ++  L KK   ++A  LF  + +  + +PN  TY  +I   C   K+  A 
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAMKK--DAEPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
           M+ + M+  GL PN  T   ++   CK   FE AY++ +   + GC PN   Y ++IDGL
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
            KKG V +AY L +        A+ + YT L+         +    +F  M + G  PD+
Sbjct: 472 GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDL 531

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
               T +    +   +++    F++    G  P   +Y+ +I G  + G        F  
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHA 591

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M Q G A D   Y A++ G CK  KLD+A +  E M  K + P   T  ++     K   
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651

Query: 593 SATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
              A ++ E    K   L +   ++LI       R+  A L   +++ K
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK 700



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 217/472 (45%), Gaps = 20/472 (4%)

Query: 145 SNGNFERAHEVMQ------CM--VSSFAEI-------GRLKEGFSMVIEMTNNGLPLITS 189
           S G FE A++++       C+  V SF  I        ++ E  ++   M  +  P  +S
Sbjct: 334 SAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP-NSS 392

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++ + C  G VE A  + DEM   G+  +  +  +MV   C+  +   A       
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             RG   ++ T   LI      G +G++  A+ L E M+  G   N   +T LI      
Sbjct: 453 SQRGCNPNSVTYCSLIDGL---GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  E   ++F ++ R    +P++      +    K   + +   + E +K  G LP+  +
Sbjct: 510 GRKEDGHKIFKEMNRR-GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 568

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+G  K G       +   M ++G   +  AYNA++DG CK G++ +AYE+L++  
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK 628

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            + +     TY  ++    K     +A  LF      G+  ++  Y++LI  F +  ++ 
Sbjct: 629 VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 688

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+ S++   ++   I+ A+  FQ M ++ C+P+  TY  LI
Sbjct: 689 EAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 748

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +GLC+  K ++A  F++ M  +G+ P  VT  T+     K G+   A  + E
Sbjct: 749 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFE 800



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 223/514 (43%), Gaps = 43/514 (8%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F + G +   +    E+ + GL     +   ++ + C+ G +  AEE+F +M     
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERA 318

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y   G+   A + L  + +RG I    +   ++T     G +  + +
Sbjct: 319 VPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCL---GKKRKVDE 375

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  L E M +K  +PN  T+ ++ID LC  G  E+A+ +  ++  +  + PN+ T   M+
Sbjct: 376 ALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF-PNLLTVNIMV 433

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK +K   A  + E   ++G  PN+ TY SLI G  K GN + AY L + M   G  
Sbjct: 434 DRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN 493

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI--------------------- 438
            N   Y ++I      GR ++ +++ K+  +R  Q D                       
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553

Query: 439 --------------TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
                         +Y+IL+    K  + ++   +F  M + G   D  AY  ++  FC+
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             K+ ++ +  +E     + PT  TY S+I G  +   +  A   F+     G   + I 
Sbjct: 614 SGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIV 673

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y +LI G  K  ++DEA    E M+ KG++P   T  +L     K  +   A+I  +S+ 
Sbjct: 674 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMK 733

Query: 605 K---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           +        T + LI  LC  ++   A +F+ ++
Sbjct: 734 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 767



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 187/399 (46%), Gaps = 5/399 (1%)

Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
           E+V +EM   G      +   +V A  R  R+ +A+R ++AM         +  T+LI A
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
             +       ++A ELL +M   G++  V   T L+  L ++G  E A  L +  V+   
Sbjct: 192 MAEA---RQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALAL-VDEVKGSC 247

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            +P++  Y   I  + K   ++ A      +K QGL P+  +YTS+I+  CK G    A 
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAE 307

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
           +L   M  E   P  YAYN +I G    G+ + AY+LL +  +R      +++  +L+  
Sbjct: 308 ELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCL 367

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K+ +  +AL LF  M K    P+   Y  +I   C   K++E+     E   AGLFP  
Sbjct: 368 GKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNL 426

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T   M+    +      A + F+  +Q GC P+++TY +LI GL K+  +D+A + +E+
Sbjct: 427 LTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN 486

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
           M+  G +   V   +L   +   G       I + ++++
Sbjct: 487 MLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 152/336 (45%), Gaps = 8/336 (2%)

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++S   +  +++ AE ++  M+     P  + YT LI    +    ERA +L+  M + G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
               +  +  ++  L ++GRV+ A  L+ +     L+ D + Y + +    K      A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  +   GL PD  +YT++I   C+  ++ E+E+ F +  T    P    Y +MI GY
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
              G   +A K   ++ + GC P  +++ ++++ L K+ K+DEA   +E+M  K   P  
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNS 391

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHK 634
            T   +    C  G    A +I + ++       + TVN ++ +LC  K+   A   F  
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 635 LLGKDQNVDRVSLAALKNACYE----SNKYALFSDL 666
              +  N + V+  +L +   +     + Y LF ++
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM 487


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 181/377 (48%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G +E   ++ ++   +G   +   Y  ++  YC+ G +  A+     +  +G +   
Sbjct: 196 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV 255

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T   +I  FC KG     K    LL EM  +G   NV  +  +ID   K G   KA   
Sbjct: 256 ETYGAIINGFCKKG---DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 312

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
              ++     KP++ TY  +ISG C++ K++ A+ LLE+   +GL+PN  +YT LI+ +C
Sbjct: 313 IEGMIEC-GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYC 371

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K G ++RA + +  M + G  P++  Y A++ GL   G V  A  + +K  +R +  D  
Sbjct: 372 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 431

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
            Y IL+S   K+ +   A  L   M+   + PD   Y TL+  F R   + E+ K F+  
Sbjct: 432 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 491

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           I  G+ P    Y +MI GY + G +  A+    RM +   APD  TY  +I G  KQ  L
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551

Query: 559 DEACQFYESMIGKGISP 575
           D A + +  M+     P
Sbjct: 552 DGAQKMFREMVKMKCKP 568



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 12/459 (2%)

Query: 87  NLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCAT---SL 143
           N++++  S T E    V+ + ++      AL  +Y+ +   K   +    I C +    L
Sbjct: 119 NMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL---KTYTYFPDVIACNSLLNML 175

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELG 202
           +  G  E A +    MV    + G+L+EG  ++ +    G +P I    N ++   C+ G
Sbjct: 176 VKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNII-FYNTLIDGYCKKG 234

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
            +E A  +F E+  +G      +Y  ++  +C+ G     DR L  M  RG  ++     
Sbjct: 235 DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYN 294

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            +I A   +   G I +A E +E M+  G KP++ T+  LI G C+ G   +A +L L+ 
Sbjct: 295 TIIDA---RYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQL-LEQ 350

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                  PN  +YT +I  YCK+   +RA   L  M E+G  P+  TY +L++G    G 
Sbjct: 351 ALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE 410

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  + + M + G  P+   YN ++ GLCKK ++  A  LL +   + +  D   Y  
Sbjct: 411 VDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT 470

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+   ++     +A  LF   ++ G+NP I  Y  +I  +C+   MK++           
Sbjct: 471 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 530

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
           L P + TY+++I GY++  ++  A K F+ M ++ C P+
Sbjct: 531 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 182/382 (47%), Gaps = 5/382 (1%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT-LLITAFCDKGFRGSIKQAFELL 284
           Y  ++  Y     V   +  L+ ++  G I      T +++   C +G    +++  +L+
Sbjct: 152 YYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEG---KLEEGRKLI 208

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E+   +G  PN+  +  LIDG CKKG  E A  LF++L +   + P V TY A+I+G+CK
Sbjct: 209 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL-KLKGFLPTVETYGAIINGFCK 267

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
           +      + LL  M  +GL  N   Y ++I    K G+  +A + ++ M + GC P+I  
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           YN +I G C+ G+V EA +LL++A  + L  +K +YT L+  + KQ    +A      M 
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 387

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G  PD+  Y  L+       ++  +    ++ +  G+FP    Y  ++ G  +   + 
Sbjct: 388 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 447

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +A      M      PD   Y  L+ G  +   LDEA + +E  I KG++P  V    + 
Sbjct: 448 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 507

Query: 585 YEYCKQGDSATAMIILESLDKK 606
             YCK G    AM  +  + K+
Sbjct: 508 KGYCKFGMMKDAMACINRMKKR 529



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 4/365 (1%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +MV   C+ G++ E  + +     +G I +      LI  +C KG    ++ A  L  E+
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKG---DMEMANGLFIEL 246

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             KG+ P V T+  +I+G CKKG  +   RL +++  S     NV  Y  +I    K   
Sbjct: 247 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM-NSRGLTVNVQVYNTIIDARYKHGH 305

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           + +A   +E M E G  P+  TY +LI G C+ G    A  L++    +G  PN ++Y  
Sbjct: 306 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 365

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I   CK+G    A   L +  +R  + D +TY  L+   +   E   AL +  +M++ G
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + PD   Y  L++  C++ K+  ++    E +   + P    Y +++ G++R+GN+  A 
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 485

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
           K F+   + G  P  + Y A+I G CK   + +A      M  + ++P E T  T+   Y
Sbjct: 486 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 545

Query: 588 CKQGD 592
            KQ D
Sbjct: 546 VKQHD 550



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 160/346 (46%), Gaps = 21/346 (6%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV---------- 332
           +LE M  +   P     +++I      G  EKA  L+  ++++  Y P+V          
Sbjct: 116 VLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNML 175

Query: 333 ---------HTYTA-MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                      +T  M+ G CKE K+     L+E    QG +PN   Y +LI G+CK G+
Sbjct: 176 VKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGD 235

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E A  L   +  +G  P +  Y AII+G CKKG  +    LL +   R L  +   Y  
Sbjct: 236 MEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNT 295

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K     +A+     M++ G  PDI  Y TLI+  CR  K+ E+++  ++A+  G
Sbjct: 296 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 355

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           L P K +YT +I  Y + G    A  +   M + G  PD +TYGAL+ GL    ++D A 
Sbjct: 356 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 415

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL 607
              E M+ +G+ P       L    CK+     A ++L E LD+ +
Sbjct: 416 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSV 461



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E    +++ F + G  K    +++EM + GL +     N ++    + G +  A E  + 
Sbjct: 256 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 315

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   G   D  +Y  ++   CR G+V+EAD+ L   L +G + +  + T LI A+C    
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCK--- 372

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           +G   +A   L EM  +G KP++ T+  L+ GL   G  + A  +  K++    + P+  
Sbjct: 373 QGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF-PDAG 431

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
            Y  ++SG CK+ K+  A++LL  M +Q +LP+   Y +L+ G  + GN + A  L +L 
Sbjct: 432 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 491

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            ++G  P I  YNA+I G CK G +++A   + +  +R L  D+ TY+ ++  ++KQ + 
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551

Query: 454 KQALGLFCRMVKAGLNPDI 472
             A  +F  MVK    P++
Sbjct: 552 DGAQKMFREMVKMKCKPNV 570



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 12/327 (3%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYK----PNVHTYTAMISGYCKEEKMNRAEMLLE 356
           +++ GLCK+G  E+  +L       D +     PN+  Y  +I GYCK+  M  A  L  
Sbjct: 190 IMVKGLCKEGKLEEGRKLI-----EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFI 244

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            +K +G LP   TY ++I G CK G+F+    L+  M   G T N+  YN IID   K G
Sbjct: 245 ELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHG 304

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            + +A E ++   +   + D +TY  L+S   +  +  +A  L  + +  GL P+  +YT
Sbjct: 305 HIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYT 364

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            LI A+C+Q     +  +  E    G  P   TY +++ G +  G +  A+   ++M + 
Sbjct: 365 PLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 424

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  PD   Y  L+SGLCK+ KL  A      M+ + + P      TL   + + G+   A
Sbjct: 425 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 484

Query: 597 MIILE-SLDKKL--WIRTVNTLIRKLC 620
             + E +++K +   I   N +I+  C
Sbjct: 485 RKLFELTIEKGMNPGIVGYNAMIKGYC 511



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 136/345 (39%), Gaps = 51/345 (14%)

Query: 312 TEKAFRLFLKLVRSDNYKP-NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
            E   + F  + R     P N   Y++++    +    +  E++LE M+ + + P     
Sbjct: 73  VELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM 132

Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCT-PNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +I  +   G  E+A +L   + K     P++ A N++++ L K GR++ A +      
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARK------ 186

Query: 430 QRELQADKITYTILLSEHL-KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
                     +T ++ + L K+ + ++   L       G  P+I  Y TLI  +C++  M
Sbjct: 187 ----------FTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDM 236

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           + +   F E    G  PT ETY ++I G+ + G+  +  +    MN  G   +   Y  +
Sbjct: 237 EMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTI 296

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           I    K   + +A +  E MI  G  P                                 
Sbjct: 297 IDARYKHGHIVKAVETIEGMIECGCKPD-------------------------------- 324

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           I T NTLI   C + +V  A     + LGK    ++ S   L +A
Sbjct: 325 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 369


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 206/459 (44%), Gaps = 46/459 (10%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++   C  G +E A  VFD M  R    +  S+ ++   YCR GR  +A      +
Sbjct: 152 TRNILLQALCAAGRMELARRVFDAMPER----NEFSFGILARGYCRAGRSMDA----LGV 203

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           LD    ++      ++  FC +G    + +A  L+E M  +G  PNV T    I  LCK 
Sbjct: 204 LDSMPTMNLVVCNTVVAGFCREG---QVDEAERLVERMRDEGLAPNVVTFNARISALCKA 260

Query: 310 GWTEKAFRLFLKLVRSDNY---KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
           G    A+R+F  +         +P+  T+  M+SG+C+   ++ A +L++ M+  G L  
Sbjct: 261 GRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRR 320

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR---VQEAYE 423
             +Y   + G  + G    A +L+  M  EG  PN Y YN I+DGLCK+G+   V++  +
Sbjct: 321 VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVED 380

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
            +K      +  D +TYT LL  +  +     A  +   M + G  P+   Y  L+ +  
Sbjct: 381 FVKSGV---MTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLW 437

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG------ 537
           +  ++ E+E+  +     G      +   +I G  R+  +  A+     M   G      
Sbjct: 438 KAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGR 497

Query: 538 -----------------CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
                            C PD ITY  L+S LCK+ + DEA +    MIGK ISP  V  
Sbjct: 498 LGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLY 557

Query: 581 VTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLI 616
            T  + YCK G ++ A+ +L  ++K   K   RT N LI
Sbjct: 558 DTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLI 596



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 225/509 (44%), Gaps = 48/509 (9%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
           G F R  E     +S     G + E   ++ EM + G+   + T N +V   C+ G    
Sbjct: 315 GGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFD 374

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
             +V D + +  +  D  +Y  ++ AYC  G    A+R L  M  +G   ++ T  +L+ 
Sbjct: 375 VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQ 434

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG------------WTEK 314
           +    G    I +A  LLE M  KG+  +  +  ++IDGLC+              W E 
Sbjct: 435 SLWKAG---RITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEG 491

Query: 315 AFRL----------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           +  L                S    P+  TY+ ++S  CKE + + A+  L  M  + + 
Sbjct: 492 SLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDIS 551

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P++  Y + I+G+CK G    A  ++  M K+GC P+   YN +I G  +K    E  +L
Sbjct: 552 PDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKL 611

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           + +   + +  + +TY  L+    ++    +A+ L   M++  + P+I ++  LI AFC+
Sbjct: 612 ISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCK 671

Query: 485 QKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRD-GNISSAVKYFQRMNQIGCAPDN 542
                 +++ F  ++ T G    KE   S++C  L   G    A+   + + ++  +   
Sbjct: 672 TSDFSAAQRVFDASLSTCG---QKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHR 728

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
             Y  +I GLCK  ++D   +  + ++ KG S                 D A  M ++++
Sbjct: 729 FPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYS----------------FDPAAFMPVIDA 772

Query: 603 LDKKLWIRTVNTLIRKL--CSEKRVGMAA 629
           L ++   + V+ L +K+   +E+  G+AA
Sbjct: 773 LSERGKKQHVDMLSQKMMEMAERDNGLAA 801


>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 13/421 (3%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGA 254
           C   L   A+ V+D M   G   D      +V +Y  +GR+  +   L+ +    +   A
Sbjct: 83  CRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLADVQCNNVGVNA 142

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
           ++ N    +LI        +  +  A  L  E++R  +KP  YT  +LI GLC+ G  ++
Sbjct: 143 VVYNDLFNVLIR-------QNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGEIDE 195

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSL 373
           AF+L LK +RS    P+V TY  +I G C   +++RA  LL  +   G   P+  +YT +
Sbjct: 196 AFKL-LKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMI 254

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G+CK+   E    L D M   G  PN + +NA+IDG  K G +  A  L  K   +  
Sbjct: 255 ISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGC 314

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             D  T+T L++ H +  +  QA+ ++ +M +  +   ++ Y+ L++  C   ++ ++  
Sbjct: 315 LPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARD 374

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +    + + P    Y  +I GY + GN+  A K    M    C PD +T+  LI G C
Sbjct: 375 ILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHC 434

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVN 613
            + ++ EA  F++ M+  G +P E+T   L     K G    A  + E L + L + T +
Sbjct: 435 MKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNLTLGTTS 494

Query: 614 T 614
           +
Sbjct: 495 S 495



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 7/381 (1%)

Query: 192 NRVVGIACE----LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
           NR++G        +G ++ + E+  ++    V  +A  Y  +     R  +V +A     
Sbjct: 107 NRLLGFLVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFR 166

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            ++         T+ +LI   C  G    I +AF+LL+++   G  P+V T+  LI GLC
Sbjct: 167 ELIRLRYKPVTYTVNILIRGLCRVG---EIDEAFKLLKDLRSFGCLPDVITYNTLIHGLC 223

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
                ++A  L  ++  +  + P+V +YT +ISGYCK  KM    +L + M   G  PNT
Sbjct: 224 LINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNT 283

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            T+ +LI G  K+G+   A  L   M  +GC P++  + ++I+G  +  +V +A ++  K
Sbjct: 284 FTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHK 343

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
             ++ + A   TY++L+S         +A  +   + ++ + P    Y  +I  +C+   
Sbjct: 344 MNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGN 403

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+ K   E       P K T+T +I G+   G +  A+ +F +M  +GCAPD IT   
Sbjct: 404 VDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNN 463

Query: 548 LISGLCKQSKLDEACQFYESM 568
           L S L K     EA +  E +
Sbjct: 464 LRSCLLKAGMPGEAARVKEVL 484



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 177/389 (45%), Gaps = 11/389 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +VSS+A +GRL     ++ ++  N + +     N +  +      V  A  +F E+    
Sbjct: 113 LVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLR 172

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +  +++   CR+G + EA + L  +   G + D  T   LI   C       + 
Sbjct: 173 YKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLC---LINEVD 229

Query: 279 QAFELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A  LL E+   G + P+V ++T++I G CK    E+   LF +++ S    PN  T+ A
Sbjct: 230 RARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGT-APNTFTFNA 288

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+ K   M  A  L  +M  QG LP+  T+TSLI GH +V    +A D+   M ++ 
Sbjct: 289 LIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKN 348

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              ++Y Y+ ++ GLC   R+ +A ++L+   + ++      Y  ++  + K     +A 
Sbjct: 349 IGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEAN 408

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +   M      PD   +T LI   C + +M E+  FF + +  G  P + T  ++    
Sbjct: 409 KIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCL 468

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG 546
           L+ G    A +  + + Q      N+T G
Sbjct: 469 LKAGMPGEAARVKEVLAQ------NLTLG 491



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 4/299 (1%)

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+ ++   C+    + A+++ + M+  G +P+      L+  +  VG  + + +L+  +
Sbjct: 74  TYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLADV 133

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                  N   YN + + L ++ +V +A  L ++  +   +    T  IL+    +  E 
Sbjct: 134 QCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGEI 193

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-PTKETYTS 512
            +A  L   +   G  PD+  Y TLI   C   ++  +    +E    G F P   +YT 
Sbjct: 194 DEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTM 253

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I GY +   +      F  M   G AP+  T+ ALI G  K   +  A   Y  M+ +G
Sbjct: 254 IISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQG 313

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMA 628
             P   T  +L   + +      AM +   +++K     + T + L+  LC+  R+  A
Sbjct: 314 CLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKA 372



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 111/229 (48%), Gaps = 6/229 (2%)

Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
           NG F         ++S + ++ +++EG  +  EM N+G    T T N ++    +LG + 
Sbjct: 241 NGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMA 300

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLL 264
            A  ++ +M  +G   D +++  ++  + R+ +V +A D W   M ++       T ++L
Sbjct: 301 SALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMW-HKMNEKNIGASLYTYSVL 359

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           ++  C+      + +A ++L  +      P  + +  +IDG CK G  ++A ++  ++  
Sbjct: 360 VSGLCNN---NRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEM-E 415

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            +  KP+  T+T +I G+C + +M  A    ++M   G  P+  T  +L
Sbjct: 416 VNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNL 464


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 206/403 (51%), Gaps = 5/403 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V+   + G +   F+++ +M    +       N ++   C+   V+ A  +F EM  +G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C  GR ++A + LS M+++    +  T   LI AF  +G      
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFV 271

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A +L ++M+++   P+++T+  LI+G C     +KA ++F  +V  D + P++ TY  +
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTL 330

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     L   M  +GL+ +T TYT+LI G    G+ + A  +   M  +G 
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  Y+ ++DGLC  G++++A E+     + E++ D   YT ++    K  +      
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  Y T+I+  C ++ ++E+    ++    G  P   TY ++I  +L
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+ +++ +  + M       D  T G L++ +    +LD++
Sbjct: 511 RDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 552



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 209/454 (46%), Gaps = 5/454 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           +E +   +  +++ +    R+ +  ++V +M   G    T T   ++           A 
Sbjct: 75  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            + D M  RG   +  +Y ++V   C+ G +  A   L+ M       D      +I + 
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C   +R  +  A  L +EM  KG +PNV T++ LI  LC  G    A +L   ++     
Sbjct: 195 CK--YR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KI 250

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN+ T+ A+I  + KE K   AE L + M ++ + P+  TY SLI G C     ++A  
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           + + M  + C P++  YN +I G CK  RV++  EL ++   R L  D +TYT L+    
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              +   A  +F +MV  G+ PDI  Y+ L+   C   K++++ + F     + +     
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            YT+MI G  + G +      F  ++  G  P+ +TY  +ISGLC +  L EA    + M
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490

Query: 569 IGKGISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
              G  P   T  TL   + + GD +A+A +I E
Sbjct: 491 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 197/431 (45%), Gaps = 7/431 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           TL+ ++   C    +  A  + D+M   G   D  ++  ++       + +EA   +  M
Sbjct: 81  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + RG   +  T  +++   C    RG I  AF LL +M     + +V     +ID LCK 
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCK---RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              + A  LF K + +   +PNV TY+++IS  C   + + A  LL  M E+ + PN  T
Sbjct: 198 RHVDDALNLF-KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           + +LI    K G F  A  L D M K    P+I+ YN++I+G C   R+ +A ++ +   
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
            ++   D  TY  L+    K    +    LF  M   GL  D   YTTLI          
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            ++K F++ ++ G+ P   TY+ ++ G   +G +  A++ F  M +     D   Y  +I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI 609
            G+CK  K+D+    + S+  KG+ P  VT  T+    C +     A  +L+ + +   +
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496

Query: 610 R---TVNTLIR 617
               T NTLIR
Sbjct: 497 PDSGTYNTLIR 507



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 180/384 (46%), Gaps = 39/384 (10%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           +  LL +M++ G++P++ T + L++G C       A  L  ++V    Y+P+  T+T +I
Sbjct: 63  SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLI 121

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            G     K + A  L++RM ++G  PN  TY  ++ G CK G+ + A++L++ M      
Sbjct: 122 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 181

Query: 400 PNIYAYNAIIDGLCK-----------------------------------KGRVQEAYEL 424
            ++  +N IID LCK                                    GR  +A +L
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 241

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           L    ++++  + +T+  L+   +K+ +  +A  L   M+K  ++PDI  Y +LI  FC 
Sbjct: 242 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 301

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
             ++ ++++ F+  ++   FP  +TY ++I G+ +   +    + F+ M+  G   D +T
Sbjct: 302 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 361

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  LI GL      D A + ++ M+  G+ P  +T   L    C  G    A+ + + + 
Sbjct: 362 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 421

Query: 605 K---KLWIRTVNTLIRKLCSEKRV 625
           K   KL I    T+I  +C   +V
Sbjct: 422 KSEIKLDIYIYTTMIEGMCKAGKV 445



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 9/318 (2%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-----VRSDNYKPN 331
           +  A  L   MV+    P+++    L+  + K     K F L + L     +    Y+P+
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM----KKFDLVISLALLGKMMKLGYEPS 78

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + T +++++GYC  ++++ A  L+++M E G  P+T T+T+LI+G         A  L+D
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + GC PN+  Y  +++GLCK+G +  A+ LL K    +++AD + +  ++    K  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               AL LF  M   G+ P++  Y++LI+  C   +  ++ +   + I   + P   T+ 
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
           ++I  ++++G    A K    M +    PD  TY +LI+G C   +LD+A Q +E M+ K
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 572 GISPCEVTRVTLAYEYCK 589
              P   T  TL   +CK
Sbjct: 319 DCFPDLDTYNTLIKGFCK 336



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 9/230 (3%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           +K+ +   +L L  +M+K G  P I   ++L+  +C  K++ ++     + +  G  P  
Sbjct: 55  MKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 114

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            T+T++I G       S AV    RM Q GC P+ +TYG +++GLCK+  +D A      
Sbjct: 115 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 174

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEK 623
           M    I    V   T+    CK      A+ + + ++ K  IR    T ++LI  LCS  
Sbjct: 175 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYG 233

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
           R   A+     ++ K  N + V+  AL +A  +  K+     L  D+ +R
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 8/231 (3%)

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE--SEKFFQEAITAGLFPT 506
           K  +   A+GLF  MVK+   P I  +  L++A  + KK     S     + +  G  P+
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             T +S++ GY     IS AV    +M ++G  PD IT+  LI GL   +K  EA    +
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD-KKLWIRTV--NTLIRKLCSEK 623
            M+ +G  P  VT   +    CK+GD   A  +L  ++  K+    V  NT+I  LC  +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGI 674
            V  A   F ++  K    + V+ ++L  +C  S  Y  +SD SQ +++ I
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLI-SCLCS--YGRWSDASQLLSDMI 246


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 4/377 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G       +   +   G+  +   Y  ++   C+ G V  A      M   G + + 
Sbjct: 169 CEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNP 228

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T ++L+  F  +G +   ++ F++ E M R G  PN Y +  LI   C  G  +KAF++
Sbjct: 229 HTYSVLMNGFFKQGLQ---REGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F ++ R       V TY  +I G C+ +K   A  L+ ++ + GL PN  TY  LI G C
Sbjct: 286 FAEM-REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            V   + A  L + +   G +P +  YN +I G  K   +  A +L+K+  +R +   K+
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYTIL+    +   T++A  +   M K+GL PD++ Y+ L+   C    MKE+ K F+  
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL 464

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
               L P    Y +MI GY ++G+   A++    M Q G  P+  ++ + I  LC+  K 
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKW 524

Query: 559 DEACQFYESMIGKGISP 575
            EA      MI  G+ P
Sbjct: 525 KEAELLLGQMINSGLKP 541



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 9/408 (2%)

Query: 234 CRMGRVTEADR--WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
           C + R    D+  W+   L    +LD  +  ++I   C+ G+     + F LL  +   G
Sbjct: 132 CLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGY---FVKGFRLLAMLEEFG 188

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             PNV  +T LIDG CK G    A  LF K+ R     PN HTY+ +++G+ K+      
Sbjct: 189 LSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRL-GLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
             + E MK  G++PN   Y  LI  +C  G  ++A+ +   M ++G    +  YN +I G
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           LC+  +  EA +L+ K  +  L  + +TY IL++      +   A+ LF ++  +GL+P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           +  Y TLIA + + + +  +    +E     + P+K TYT +I  + R  +   A +   
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
            M + G  PD  TY  L+ GLC    + EA + ++S+    + P  V   T+ + YCK+G
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487

Query: 592 DSATAMIILESLDKKLWIRTVNTL---IRKLCSEKRVGMAALFFHKLL 636
            S  A+ +L  + +   +  V +    I  LC +++   A L   +++
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMI 535



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 195/400 (48%), Gaps = 8/400 (2%)

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  +V AY       +A  +L  M+  G +  + T   L+       +     +A+ +  
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNY---FDKAWWIFN 148

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           E+  K    + Y+  ++I G C+ G+  K FRL L ++      PNV  YT +I G CK+
Sbjct: 149 ELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRL-LAMLEEFGLSPNVVIYTTLIDGCCKD 206

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
             +  A+ L  +M   GL+PN +TY+ L+ G  K G     + + + M + G  PN YAY
Sbjct: 207 GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I   C  G V +A+++  +  ++ +    +TY IL+    +  +  +A+ L  ++ K
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            GL+P+I  Y  LI  FC  +KM  + + F +  ++GL PT  TY ++I GY +  N++ 
Sbjct: 327 VGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           A+   + M +   AP  +TY  LI    + +  ++AC+ +  M   G+ P   T   L +
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLH 446

Query: 586 EYCKQGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSE 622
             C  G+   A  + +SL +  L   +V  NT+I   C E
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 167/310 (53%), Gaps = 6/310 (1%)

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           GL     ++++ M   G+  +A +Y  ++  YC  G V +A +  + M ++G      T 
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 262 TLLITAFCDKGFRGS-IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
            +LI   C    RG    +A +L+ ++ + G  PN+ T+ +LI+G C     + A RLF 
Sbjct: 302 NILIGGLC----RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +L +S    P + TY  +I+GY K E +  A  L++ M+E+ + P+  TYT LI    ++
Sbjct: 358 QL-KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
            + E+A ++  LM K G  P++Y Y+ ++ GLC  G ++EA +L K   +  LQ + + Y
Sbjct: 417 NHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
             ++  + K+  + +AL L   MV++G+ P++ ++ + I   CR +K KE+E    + I 
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536

Query: 501 AGLFPTKETY 510
           +GL P+   Y
Sbjct: 537 SGLKPSVSLY 546



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 145/317 (45%), Gaps = 33/317 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G  +EGF M   M  +G+       N ++   C  G+V+ A +VF EM  +G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD-------- 270
           +     +Y +++   CR  +  EA + +  +   G   +  T  +LI  FCD        
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 271 ----------------------KGFRG--SIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
                                  G+    ++  A +L++EM  +   P+  T+T+LID  
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
            +   TEKA  +   L+      P+V+TY+ ++ G C    M  A  L + + E  L PN
Sbjct: 414 ARLNHTEKACEMH-SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
           +  Y ++I+G+CK G+  RA  L++ M + G  PN+ ++ + I  LC+  + +EA  LL 
Sbjct: 473 SVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLG 532

Query: 427 KAFQRELQADKITYTIL 443
           +     L+     Y ++
Sbjct: 533 QMINSGLKPSVSLYKMV 549


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 196/411 (47%), Gaps = 28/411 (6%)

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI-------- 303
           +G   +  TL +LI  F      G    +F +   +++KG+ PNV T T LI        
Sbjct: 89  KGIASNLVTLNILINCFSQ---LGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVS 145

Query: 304 -----DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
                +GLCK G    A +L L+ V     +PNV  Y  +I   CK + +N A  L   M
Sbjct: 146 YGTLINGLCKVGQARAALQL-LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
             +G+ P+  TY++LI G   VG  + A DL + M  E   P++Y +N ++DG CK G++
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
           +E   +     ++ ++ + +TY  L+  +    +  +A  +F  M + G+NPD  +Y  +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I  FC+ KK+ E+   F++     + P   TYTS+I G  + G IS A+K    M+  G 
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 539 APDNITYGALISGLCKQSKLDEAC--------QFYESMIGKGISPCEVTRVTLAYEYCKQ 590
            PD ITY +++  LCK  ++D+A         Q +E +  KG +        +   +C +
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444

Query: 591 GDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           G    A+ +L  ++    I   +T   +I  L  +    MA     +++ +
Sbjct: 445 GLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 495



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 182/366 (49%), Gaps = 15/366 (4%)

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRG 275
           +G+C   S Y  ++   C++G+   A + L   +D   +  N  +   +I + C      
Sbjct: 138 KGLCLKVS-YGTLINGLCKVGQARAALQLLRR-VDGKLVQPNVVMYNTIIDSMCKVKL-- 193

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
            + +AF+L  EMV +G  P+V T++ LI G    G  + A  LF K++  +N KP+V+T+
Sbjct: 194 -VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL-ENIKPDVYTF 251

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
             ++ G+CK+ KM   + +   M +QG+ PN  TY SL+ G+C V    +A  + + M +
Sbjct: 252 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQ 311

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P+  +YN +I+G CK  +V EA  L KK   + +  + +TYT L+    K  +   
Sbjct: 312 GGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 371

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM--------KESEKFFQEAITAGLFPTK 507
           AL L   M   G+ PDI  Y++++ A C+  ++        K  ++ F++    G     
Sbjct: 372 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDV 431

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             YT MI G+   G  + A+    +M   G  PD  TY  +I  L K+ + D A +    
Sbjct: 432 YAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLRE 491

Query: 568 MIGKGI 573
           MI +G+
Sbjct: 492 MIARGL 497



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 139/320 (43%), Gaps = 47/320 (14%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C++ LV  A +++ EM + G+  D  +Y  ++  +  +G++ +A    + M+ 
Sbjct: 182 NTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL 241

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
                D  T  +L+  FC  G    +K+   +   M+++G KPNV T+  L+DG C    
Sbjct: 242 ENIKPDVYTFNILVDGFCKDG---KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 298

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
             KA  +F  + +     P+  +Y  MI+G+CK +K++ A  L ++M  + ++PN  TYT
Sbjct: 299 VNKANSIFNTMAQG-GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNI----------------------------- 402
           SLI G CK G    A  L+D M   G  P+I                             
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417

Query: 403 --------------YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
                         YAY  +I G C KG   EA  LL K        D  TY I++    
Sbjct: 418 VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLF 477

Query: 449 KQAETKQALGLFCRMVKAGL 468
           K+ E   A  L   M+  GL
Sbjct: 478 KKDENDMAEKLLREMIARGL 497



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 10/223 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F + G++KEG ++   M   G+     T   ++   C +  V  A  +F+ M   G
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  SY +M+  +C++ +V EA      M  +  I +  T T LI   C     G I 
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK---SGKIS 370

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---VRSD----NYKPN 331
            A +L++EM  +G  P++ T++ ++D LCK    +KA  L  KL   V  D     Y  +
Sbjct: 371 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLD 430

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           V+ YT MI G+C +   N A  LL +M++ G +P+  TY  +I
Sbjct: 431 VYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 59/339 (17%)

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           H  V +F R      L+ ++  TP I+ +  I+  L K      A  L ++   + + ++
Sbjct: 41  HNLVSSFNR------LLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASN 94

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA---------------------- 474
            +T  IL++   +  +   +  +F  ++K G +P++                        
Sbjct: 95  LVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLC 154

Query: 475 --------------------------YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
                                     Y T+I + C+ K + E+   + E ++ G+ P   
Sbjct: 155 KVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVV 214

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY+++I G+   G +  A+  F +M      PD  T+  L+ G CK  K+ E    +  M
Sbjct: 215 TYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 274

Query: 569 IGKGISPCEVTRVTLAYEYC--KQGDSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRV 625
           + +GI P  VT  +L   YC  KQ + A ++   +         ++ N +I   C  K+V
Sbjct: 275 MKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKV 334

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNACYESNK--YAL 662
             A   F K+  K+   + V+  +L +   +S K  YAL
Sbjct: 335 DEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYAL 373


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 238/503 (47%), Gaps = 19/503 (3%)

Query: 152 AHEVM-QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
           AH ++ +  ++ + + G + +   +  EM+ +   + +   NR +G+       + A   
Sbjct: 7   AHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHY 66

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD----NATLTLLIT 266
           + +M  RG    + +Y   +   C++   T  D  L  M     + D    N  L LL  
Sbjct: 67  YSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFV 126

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
                   G I  A E+ E++V+ G KP+V T+T++I G+CK    + A + +  ++   
Sbjct: 127 -------EGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHK- 178

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
            + P+     A++ G C   K++ A E++++ MK   +  +T  Y +LI G C+ G  ++
Sbjct: 179 GFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDK 238

Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
           A  +   M + GC P++  YN  ++  C +  + +A +LLK   +  ++ D  +Y  LL 
Sbjct: 239 AQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLK 298

Query: 446 EHLK-QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
              K     K  L +  +M   GL  D+ +Y T+I AFC+      + K F+E    G+ 
Sbjct: 299 GICKGNCPDKAYLLMTNKMWPKGL-CDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIP 357

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T+T  I  +L  G+ + A K   +M ++G +PD I Y  +I  LCK  K++ A   
Sbjct: 358 PDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSI 417

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCS 621
           +  M+ +GISP  ++   L   +CK    + AM + E +  +       T   +I  L  
Sbjct: 418 FCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIE 477

Query: 622 EKRVGMAALFFHKLLGKDQNVDR 644
           EK++ +A + + +++ K   +DR
Sbjct: 478 EKKISIACMVWGQMMDKGFTLDR 500



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 7/387 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR+     +  ++  NG      T   ++   C++   + A + + +M  +G   D  + 
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELLE 285
             +VV  C   +V  A   +  ++  G + L       LI+ FC  G    I +A  +  
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAG---RIDKAQAIKS 244

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
            M R G +P++ T+ V ++  C +   + A +L LKL+     +P+V++Y  ++ G CK 
Sbjct: 245 FMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKL-LKLMERSGIEPDVYSYNQLLKGICKG 303

Query: 346 EKMNRAEMLL-ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
              ++A +L+  +M  +GL  +  +Y ++I   CK+G+   AY L + MG++G  P++  
Sbjct: 304 NCPDKAYLLMTNKMWPKGLC-DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVT 362

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           +   I     KG    A +LL +  +  L  D I YT ++    K  + + A  +FC MV
Sbjct: 363 FTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMV 422

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G++PD+ ++  LI  FC+  ++ E+   ++E    G +P + TY  +I G + +  IS
Sbjct: 423 EQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKIS 482

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISG 551
            A   + +M   G   D      LI G
Sbjct: 483 IACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 196/465 (42%), Gaps = 42/465 (9%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           +R+ G   + GL++ A +VFDEM        +  Y   +       R   A+ + S M  
Sbjct: 14  SRIAGYV-KAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGT 72

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG  L + T +  IT  C       I    ELL +M      P+++   + +  L  +G 
Sbjct: 73  RGFSLSSFTYSRFITGLCKVKNFTFID---ELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A  +F K+V++   KP+V TYT +I G CK +K + A      M  +G  P+     
Sbjct: 130 IDLALEVFEKIVKNGR-KPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188

Query: 372 SLIYGHCKVGNFERAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           +++ G C     + AY+L+ D+M       +   YNA+I G C+ GR+ +A  +  K+F 
Sbjct: 189 AIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI--KSFM 246

Query: 431 RE--LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
           R    + D +TY + L+    +     A  L   M ++G+ PD+++Y  L+   C+    
Sbjct: 247 RRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCP 306

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            ++       +         +Y ++I  + + G+ +SA K F+ M Q G  PD +T+   
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIF 366

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
           I     +   + A +  + M   G+SP  +   T+    CK G                 
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSG----------------- 409

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
                          +V MA   F  ++ +  + D +S  AL N 
Sbjct: 410 ---------------KVEMAHSIFCDMVEQGISPDVISFNALING 439



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 5/317 (1%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
            ++ +G  + +  V   ++S F   GR+ +  ++   M  NG      T N  +   C+ 
Sbjct: 209 DVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDE 268

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
            +++ A+++   M   G+  D  SY  ++   C+     +A   ++  +    + D  + 
Sbjct: 269 LMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSY 328

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
             +I AFC     G    A++L EEM +KG  P+V T T+ I     KG    A +L  +
Sbjct: 329 NTIIKAFCKI---GDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQ 385

Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
           +       P+   YT +I   CK  K+  A  +   M EQG+ P+  ++ +LI G CK  
Sbjct: 386 MTEM-GLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCS 444

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK-ITY 440
               A  L + M   G  P+   Y  II GL ++ ++  A  +  +   +    D+ I  
Sbjct: 445 RVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQ 504

Query: 441 TILLSEHLKQAETKQAL 457
           T++    ++ A T + L
Sbjct: 505 TLIRGNSIENASTSRCL 521



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 86/245 (35%), Gaps = 55/245 (22%)

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
           + L A ++ Y   ++ ++K     +A+ +F  M ++        Y   I       +   
Sbjct: 3   QSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC------------ 538
           +  ++ +  T G   +  TY+  I G  +  N +   +    M  + C            
Sbjct: 63  ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLH 122

Query: 539 -----------------------APDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
                                   PD +TY  +I G+CK  K D A QF+  MI KG SP
Sbjct: 123 LLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182

Query: 576 ------------CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
                       C+  +V LAYE          + +++S   KL     N LI   C   
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYE--------LIIDVMKSGRVKLSTLVYNALISGFCRAG 234

Query: 624 RVGMA 628
           R+  A
Sbjct: 235 RIDKA 239



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++    + G+++   S+  +M   G+     + N ++   C+   V  A  +++EM  RG
Sbjct: 401 IIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRG 460

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI---------TAFC 269
              D  +YKL++       +++ A      M+D+G  LD A    LI         T+ C
Sbjct: 461 SYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNSIENASTSRC 520

Query: 270 -DKGFRGSIKQAFELLEEMV 288
            D  F  +   +F ++++ V
Sbjct: 521 LDFKFHQNYSPSFRIIKDFV 540


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 198/423 (46%), Gaps = 23/423 (5%)

Query: 163 FAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCAD 222
           FA+I RL+             LPL T+T N ++   C  G    A E+  +M +     +
Sbjct: 104 FADIFRLR-------------LPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PN 146

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSIKQAF 281
           A +Y  ++  +C  GRV      +  M +RG I  D  T   +I+ +C  G    ++ A 
Sbjct: 147 AVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVG---KVEDAT 203

Query: 282 ELLEEMVRKG-WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           ++ +EM+ +G  +PN   +  LI G C +G  E A R   ++V        V TY   + 
Sbjct: 204 KVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMV-DRGVSMTVATYNLFVH 262

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
               E +   A  L+E M E+GL P+  TY  LI G+CK G  ++A  + ++M  +G   
Sbjct: 263 TLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRA 322

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
            +  Y ++I  L  KG VQE   L   A +R ++ D   Y  L++ H    +  +A  + 
Sbjct: 323 TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M K  + PD   Y TL+   C   ++ E+    +E    G+ P   +Y ++I GY   
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G+I  AVK    M   G  P  +TY A+I GLC   +  +A    + M+G GI+P + T 
Sbjct: 443 GDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502

Query: 581 VTL 583
           ++L
Sbjct: 503 ISL 505



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 222/498 (44%), Gaps = 46/498 (9%)

Query: 78  HLRSSP--PRLNLQIDIDSLTHEQAITVVASLAN------EAGSMVALSFFYWAIGFAKF 129
           HL ++P  P L L   +    H  ++++ + L +       A     LS    A  F  F
Sbjct: 45  HLAATPSLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVLF 104

Query: 130 RHFMRLYIVCATS--------LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTN 181
               RL +  +T+        L + G   RA E+++ M S  A                 
Sbjct: 105 ADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNA----------------- 147

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG-VCADASSYKLMVVAYCRMGRVT 240
                   T N V+   C  G V+   E+  EM  RG +  D  +Y  ++  +C++G+V 
Sbjct: 148 -------VTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVE 200

Query: 241 EADRWLSAMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
           +A +    ML  G +  NA +   LI  +CD+G   +++ A     EMV +G    V T+
Sbjct: 201 DATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG---NLEVALRYRGEMVDRGVSMTVATY 257

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
            + +  L  +G   +A  L  ++       P+  TY  +I+GYCKE K  +A  + E M 
Sbjct: 258 NLFVHTLFMEGRAAEAHALVEEM-GEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
            +G+     TYTSLI+     G  +    L +   + G  P+++ YNA+I+  C  G + 
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMD 376

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
            A+E++ +  ++ +  D +TY  L+          +A GL   M K G+ PD+ +Y TLI
Sbjct: 377 RAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLI 436

Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
           + +  +  +K++ K   E +  G  PT  TY +MI G   +G    A    + M   G  
Sbjct: 437 SGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGIT 496

Query: 540 PDNITYGALISGLCKQSK 557
           PD+ TY +LI GL  + +
Sbjct: 497 PDDSTYISLIEGLTTEDE 514



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 187/404 (46%), Gaps = 45/404 (11%)

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           AF L  ++ R     +  T  +++  LC  G   +A  L  ++       PN  TY  +I
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP-----SPNAVTYNTVI 154

Query: 340 SGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           +G+C   ++     ++  M+E+G + P+  TY ++I G CKVG  E A  + D M  EG 
Sbjct: 155 AGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGK 214

Query: 398 CTPNIYAYNAIIDGLCKK-----------------------------------GRVQEAY 422
             PN   YNA+I G C +                                   GR  EA+
Sbjct: 215 VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAH 274

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            L+++  ++ L  D  TY IL++ + K+ + K+A+ +F  MV  G+   +  YT+LI A 
Sbjct: 275 ALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHAL 334

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
             +  ++E+++ F +A+  G+ P    Y ++I  +   G++  A +    M +    PD+
Sbjct: 335 SMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDD 394

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
           +TY  L+ GLC   +LDEA    E M  +GI P  V+  TL   Y  +GD   A+ + + 
Sbjct: 395 VTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDE 454

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           +  K +   + T N +I+ LC   + G A     +++G     D
Sbjct: 455 MMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPD 498



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 155/316 (49%), Gaps = 5/316 (1%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +++ G  E    +   ++  + + G L+       EM + G+ +  +T N  V      G
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEG 268

Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
               A  + +EM  +G+  DA +Y +++  YC+ G+  +A +    M+ +G      T T
Sbjct: 269 RAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYT 328

Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
            LI A   KG    +++   L  + VR+G +P+++ +  LI+  C  G  ++AF +  ++
Sbjct: 329 SLIHALSMKGM---VQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385

Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
            +     P+  TY  ++ G C   +++ A  L+E M ++G+ P+  +Y +LI G+   G+
Sbjct: 386 EKK-RITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  + D M  +G  P +  YNA+I GLC  G+  +A +L+K+     +  D  TY I
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY-I 503

Query: 443 LLSEHLKQAETKQALG 458
            L E L   + + A G
Sbjct: 504 SLIEGLTTEDERLAAG 519


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 200/438 (45%), Gaps = 23/438 (5%)

Query: 147 GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEM---------TNNGLPLITSTLNRVVGI 197
           G F         ++S  A  G L+    +V  M         T N  PLIT+ L R    
Sbjct: 268 GGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYN--PLITALLER---- 321

Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
               G V  AE +  EM   G+     +Y  ++    +  +   A    + M   G + D
Sbjct: 322 ----GFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPD 377

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
             T   L+  +C  G   ++K+A  LL ++ R G  P V T+  LIDG C+ G   +A R
Sbjct: 378 VITYNSLLNRYCKAG---NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           L  ++V    + P+V TYT +++G  K   +  A    + M  +GL P+   Y + I   
Sbjct: 435 LKEEMVEQGCF-PDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAE 493

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
             + +   A+ L ++M  +G  P+   YN IIDGLCK G +++A  L  K     LQ D 
Sbjct: 494 LTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDC 553

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITYT L+  H ++   ++A  L   MV  GL P +  YT L+   CR+  +  +  +F++
Sbjct: 554 ITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRK 613

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
            +  G+ P + TY  +I      G    A ++F  M + G AP+  TY  LI G C++  
Sbjct: 614 MLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673

Query: 558 LDEACQFYESMIGKGISP 575
             +A + Y  M   GI P
Sbjct: 674 WADAIRLYFEMHQNGIPP 691



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 206/443 (46%), Gaps = 11/443 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           ++ SF + GR  E   ++ EM   G    L   T N V+      G +E A ++ D M  
Sbjct: 243 LLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-R 301

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF--CDKGFR 274
               A + +Y  ++ A    G V +A+     M + G +    T   +I     C++   
Sbjct: 302 LSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEA 361

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +K A     EM   G  P+V T+  L++  CK G  ++A  L   L R+    P V T
Sbjct: 362 AQVKFA-----EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRA-GLAPTVLT 415

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I GYC+   +  A  L E M EQG  P+  TYT L+ G  KV N   A +  D M 
Sbjct: 416 YNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEML 475

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  P+ +AYN  I           A++L +    + +  D +TY +++    K    K
Sbjct: 476 SKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 535

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L  +MV  GL PD   YT LI A C +  ++E+ K     ++ GL P+  TYT ++
Sbjct: 536 DAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
               R GN+ SA  +F++M  +G  P+ ITY  LI  LC   +   A + +  M+ +G++
Sbjct: 596 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655

Query: 575 PCEVTRVTLAYEYCKQGDSATAM 597
           P + T   L    C++G+ A A+
Sbjct: 656 PNKYTYTLLIDGNCREGNWADAI 678



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 224/473 (47%), Gaps = 11/473 (2%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           NRV+ +  +    +    V+ EM    V     +Y  ++ ++ + GR  EA   L  M  
Sbjct: 206 NRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMET 265

Query: 252 RGA--ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +G    L++ T  ++I+    +G    ++ A +L++ M R   K + +T+  LI  L ++
Sbjct: 266 QGGGFSLNDVTFNVVISFLAREG---HLENAVKLVDSM-RLSKKASSFTYNPLITALLER 321

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G+  KA  L +++  ++   P V TY A+I G  K E+   A++    M+  GLLP+  T
Sbjct: 322 GFVRKAEALQMEM-ENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVIT 380

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y SL+  +CK GN + A  L+  + + G  P +  YN +IDG C+ G + EA  L ++  
Sbjct: 381 YNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMV 440

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++    D  TYTIL++   K      A   F  M+  GL PD  AY T I A        
Sbjct: 441 EQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTP 500

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
            + +  +  +  G++P   TY  +I G  + GN+  A +   +M   G  PD ITY  LI
Sbjct: 501 MAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLI 560

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLW 608
              C++  L EA +    M+  G+ P  VT   L +  C++G+  +A     + LD  + 
Sbjct: 561 HAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIE 620

Query: 609 IR--TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
               T N LI  LC   R  +A   FH++L +    ++ +   L +  C E N
Sbjct: 621 PNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 202/415 (48%), Gaps = 13/415 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++  E G +++  ++ +EM N G+     T N ++    +    E A+  F EM A G
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMG 373

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSI 277
           +  D  +Y  ++  YC+ G + EA  WL   L R  +     T   LI  +C  G    +
Sbjct: 374 LLPDVITYNSLLNRYCKAGNLKEA-LWLLGDLRRAGLAPTVLTYNTLIDGYCRLG---DL 429

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  L EEMV +G  P+V T+T+L++G  +K       R F   + S   +P+   Y  
Sbjct: 430 AEARRLKEEMVEQGCFPDVCTYTILMNG-SRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 338 MISGYCKEEKMNRAEM---LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
            I   C E  ++   M   L E M  +G+ P+T TY  +I G CK GN + A  L   M 
Sbjct: 489 RI---CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  P+   Y  +I   C++G ++EA +LL       LQ   +TYTIL+    ++    
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLY 605

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A G F +M+  G+ P+   Y  LI A C   +   + + F E +  GL P K TYT +I
Sbjct: 606 SAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
            G  R+GN + A++ +  M+Q G  PD  T+ AL  G   +  +  A ++ E+++
Sbjct: 666 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 110/286 (38%), Gaps = 39/286 (13%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P++   N ++  L    R  +   +  +  Q  ++   +TY  LL   LK+    +A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 457 LGLFCRMVKAG----------------LNPDIH--------------------AYTTLIA 480
             L   M   G                L  + H                     Y  LI 
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLIT 316

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           A   +  ++++E    E    G+ PT  TY ++I G L+     +A   F  M  +G  P
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           D ITY +L++  CK   L EA      +   G++P  +T  TL   YC+ GD A A  + 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 601 ESLDKKLWIRTVNTLIRKLCSEKRV---GMAALFFHKLLGKDQNVD 643
           E + ++     V T    +   ++V    MA  FF ++L K    D
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPD 482


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 4/349 (1%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M  RG+  +  +  +++  +C++G +  A    + +L  G   +  T T LI   C   
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC--- 168

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            +G I QA    +++V  G++ N  ++  LIDGLCK G T  A  L L+ V     +PNV
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL-LRRVDGKLVQPNV 227

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y+ +I G CK++ +N A  L   M  +G+ PN  TY++LI G   VG  + A DL + 
Sbjct: 228 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  E   P++Y +N ++D  CK G++  A +L+ +   R    + +TY+ +L    K   
Sbjct: 288 MISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A+ L  ++   G+ P++H YT LI   C   K++++   F++ +  G   T  TY  
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIV 407

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           M  G+ + G    A     +M + GC PD  TY  +   L K+ + D A
Sbjct: 408 MFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMA 456



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 3/318 (0%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L ++M  +G KPN+    +LI+  C+ G    AF +F K+++   Y PN  T+T +I G 
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM-GYNPNTITFTTLIKGL 167

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C + ++++A    +++   G   N  +Y +LI G CKVG    A DL+  +  +   PN+
Sbjct: 168 CLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNV 227

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y+ IIDG+CK   V +A++L  +   + +  + +TY+ L+S      + K A+ LF +
Sbjct: 228 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M+   + PD++ +  L+  FC+  K+  + K   E    G  P   TY+S++    +   
Sbjct: 288 MISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347

Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           +  AV    ++   G  P+  TY  LI GLC   KL++A   +E ++ KG     VT + 
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIV 407

Query: 583 LAYEYCKQG--DSATAMI 598
           + Y +CK+G  D A+A++
Sbjct: 408 MFYGFCKKGLFDEASALL 425



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 165/353 (46%), Gaps = 5/353 (1%)

Query: 245 WLSAMLD-RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           +LS  ++ RG   +     +LI  FC  G    I  AF +  ++++ G+ PN  T T LI
Sbjct: 108 YLSKKMEFRGIKPNLVNCNILINCFCQLGL---IPFAFSVFAKILKMGYNPNTITFTTLI 164

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC KG   +A     KLV +  ++ N  +Y  +I G CK  +   A  LL R+  + +
Sbjct: 165 KGLCLKGQIHQALNFHDKLV-ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLV 223

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            PN   Y+++I G CK  +   A+DL   M  +G +PN+  Y+A+I G    G++++A +
Sbjct: 224 QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVD 283

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           L  K     ++ D  T+ IL+    K  +   AL L   M   G  P+I  Y++++ A C
Sbjct: 284 LFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 343

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ ++     +    G+ P   TYT +I G    G +  A   F+ +   G     +
Sbjct: 344 KTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVV 403

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           TY  +  G CK+   DEA      M   G  P   T   +     K+G++  A
Sbjct: 404 TYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMA 456



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 168/341 (49%), Gaps = 8/341 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F ++G +   FS+  ++   G    T T   ++   C  G +  A    D++ A G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAFC-DKGFRGS 276
              +  SY  ++   C++G  T A   L   +D   +  N  + + +I   C DK     
Sbjct: 188 FQFNQISYGTLIDGLCKVGE-TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDK----H 242

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  AF+L  EMV KG  PNV T++ LI G    G  + A  LF K++ S+N KP+V+T+ 
Sbjct: 243 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI-SENIKPDVYTFN 301

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +CK  K++ A  L++ M ++G  PN  TY+S++   CK    ++A  L+  +  +
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQ 361

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  PN++ Y  +IDGLC  G++++A  + +    +      +TY ++     K+    +A
Sbjct: 362 GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEA 421

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
             L  +M + G  PD   Y  +  +  ++ +   +EK  +E
Sbjct: 422 SALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 1/343 (0%)

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
              +  A  L   ++R+   P       ++  L K         L  K+      KPN+ 
Sbjct: 65  NNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKM-EFRGIKPNLV 123

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
               +I+ +C+   +  A  +  ++ + G  PNT T+T+LI G C  G   +A +  D +
Sbjct: 124 NCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKL 183

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G   N  +Y  +IDGLCK G  + A +LL++   + +Q + + Y+ ++    K    
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             A  L+  MV  G++P++  Y+ LI+ F    K+K++   F + I+  + P   T+  +
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           +  + + G IS A+K    M+  G  P+ +TY +++  LCK  ++D+A      +  +GI
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
            P   T   L    C  G    A  I E L  K +  TV T I
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYI 406



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 5/317 (1%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           K N+  Y++  + +     ++ A  L   +  Q   P    +  ++    K  ++     
Sbjct: 49  KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L   M   G  PN+   N +I+  C+ G +  A+ +  K  +     + IT+T L+    
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
            + +  QAL    ++V  G   +  +Y TLI   C+  + + +    +      + P   
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y+++I G  +D +++ A   +  M   G +P+ +TY ALISG     KL +A   +  M
Sbjct: 229 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           I + I P   T   L   +CK G  + A+ +++ +  +     I T ++++  LC   RV
Sbjct: 289 ISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348

Query: 626 GMAALFFHKLLGKDQNV 642
             A     KL  KDQ +
Sbjct: 349 DKAVALLTKL--KDQGI 363



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 4/227 (1%)

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +   A+ LF  +++    P    +  ++ +  + K         ++    G+ P      
Sbjct: 67  DVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCN 126

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I  + + G I  A   F ++ ++G  P+ IT+  LI GLC + ++ +A  F++ ++  
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL 186

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMA 628
           G    +++  TL    CK G++  A+ +L  +D KL    V   +T+I  +C +K V  A
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246

Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL-SQRIAEGI 674
              + +++ K  + + V+ +AL +  +   K     DL ++ I+E I
Sbjct: 247 FDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 109/291 (37%), Gaps = 38/291 (13%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N+  Y++          V +A  L     ++      I +  +L   +K       L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            +M   G+ P++     LI  FC+   +  +   F + +  G  P   T+T++I G    
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGL---------------------------- 552
           G I  A+ +  ++  +G   + I+YG LI GL                            
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 553 -------CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-- 603
                  CK   +++A   Y  M+ KGISP  VT   L   +   G    A+ +   +  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 604 -DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            + K  + T N L+   C   ++  A     ++  + Q  + V+ +++ +A
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341


>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 891

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 229/464 (49%), Gaps = 21/464 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  ++G L++ +  V +M ++G+ +    +  ++    +LG+V      F +    G
Sbjct: 250 LIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLG 309

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y + + AYC++G + EA + L+ M+    + D    T LI  +C    +G  +
Sbjct: 310 VHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYC---LKGETE 366

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+++ EEM++   KP+V T+ +L  G  + G   K F + L+ +     +PN  TY   
Sbjct: 367 NAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDI-LEHMMDQGLEPNSLTYGIA 425

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C+   ++ AE+L   ++E+G+      Y S++ G+   G  + AY L   + K+G 
Sbjct: 426 IAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGN 485

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +  + + +I+GLC+  +V EA  + K   ++ +  D I+Y+ L+S + +  +   A  
Sbjct: 486 MVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARL 545

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  MV+ GL+ D+  YT L+  +C+  +++E+ + F + I  G+ P    YT ++ G+L
Sbjct: 546 WFHDMVERGLS-DVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHL 604

Query: 519 RD-------GNISSAVKYFQR---------MNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           ++       G       +F R         M  +   PD   Y  LI G CK   L+EA 
Sbjct: 605 KETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEAR 664

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             ++ M+ KG+ P   T   L   YC QG+ A A  + + +  K
Sbjct: 665 GLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAK 708



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 187/398 (46%), Gaps = 21/398 (5%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ ++G + E   ++ EM    L         ++   C  G  E A +VF+EM    +
Sbjct: 321 MDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANI 380

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y ++   Y R G V +    L  M+D+G   ++ T  + I  FC  G     + 
Sbjct: 381 KPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEV 440

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F ++EE   +G       +  ++ G    GWT+ A+ LFL++ +  N    + + + +I
Sbjct: 441 LFNIVEE---RGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRL-SCSKLI 496

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C++EK+  A  + + M E+ ++P+  +Y+ LI  +C+  +   A      M + G +
Sbjct: 497 NGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS 556

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-------QAE 452
            ++  Y  +++G CK GR+QEA EL  +     ++ D + YT+LL  HLK       Q  
Sbjct: 557 -DVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGI 615

Query: 453 TKQALGLFCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            K+    F R         M    + PD+  YT LI   C+ + ++E+   F E +  GL
Sbjct: 616 AKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGL 675

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
            P   TYT++I GY   G I+ A   FQ M   G  PD
Sbjct: 676 IPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPD 713



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 180/395 (45%), Gaps = 12/395 (3%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-----LKLVRSDNYKPNVHTYTAMISG 341
           M+  G K +V+  +  I GLC  G  + A+ +      L+ +  +        Y  +I G
Sbjct: 159 MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 218

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CKE K+  AE +LE     G  P+  +Y+ LI+ HCK+GN E+A+  ++ M   G   N
Sbjct: 219 LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 278

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
            Y    ++  L K G V E     +K     +  D + Y I +  + K     +A+ L  
Sbjct: 279 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 338

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+   L PD   YT LI  +C + + + + + F+E + A + P   TY  +  GY R+G
Sbjct: 339 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 398

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +       + M   G  P+++TYG  I+G C+   L EA   +  +  +GI    V   
Sbjct: 399 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 458

Query: 582 TLAYEYCKQG--DSATAMIILESLDKKLWIR-TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           ++   Y   G  D A  + +  +    +  R + + LI  LC +++VG A+     +L K
Sbjct: 459 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 518

Query: 639 DQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           +   D +S + L +A  ++    N    F D+ +R
Sbjct: 519 NVVPDVISYSKLISAYCQTRDMHNARLWFHDMVER 553



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 205/497 (41%), Gaps = 68/497 (13%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLN--RVVGIAC 199
           SL  + +F    E++Q +  SF +   L   F  ++  T +G P I   ++  R      
Sbjct: 97  SLGFHHDFSTYSEIIQILSHSF-QGKMLVSLFREILLGTGSGGPEILPLIDHLRKTCATS 155

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
            +G++E            GV  D   +   ++  C  G+   A      M+ R A+L   
Sbjct: 156 HVGMIEM-----------GVKLDVHGFSSFIIGLCDCGKFDLA----YNMVRRYAVLQEI 200

Query: 260 T----------LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           +            ++I   C +     +K+A ++LE   R G  P++Y+++ LI   CK 
Sbjct: 201 SQERVPIEAMAYNMVIDGLCKEM---KLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKM 257

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G  EKA+     +V S   + N +    ++    K   ++   +  ++ ++ G+  +   
Sbjct: 258 GNLEKAWYHVEDMV-SHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVL 316

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y   +  +CK+GN   A  L++ M      P+   Y  +I+G C KG  + A+++ ++  
Sbjct: 317 YNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEML 376

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +  ++ D +TY IL S + +     +   +   M+  GL P+   Y   IA FCR   + 
Sbjct: 377 KANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLS 436

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM-------NQIGCA--- 539
           E+E  F      G+      Y SM+CGYL  G    A   F R+       +++ C+   
Sbjct: 437 EAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLI 496

Query: 540 -------------------------PDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
                                    PD I+Y  LIS  C+   +  A  ++  M+ +G+S
Sbjct: 497 NGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS 556

Query: 575 PCEVTRVTLAYEYCKQG 591
              V  V L   YCK G
Sbjct: 557 DVIVYTV-LMNGYCKVG 572



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 22/305 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV  +   G     + + + +   G  +   + ++++   C    V  A  V   M  + 
Sbjct: 460 MVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKN 519

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  SY  ++ AYC+   +  A  W   M++RG + D    T+L+  +C  G    ++
Sbjct: 520 VVPDVISYSKLISAYCQTRDMHNARLWFHDMVERG-LSDVIVYTVLMNGYCKVG---RLQ 575

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK----KGWTEKA-----------FRLFLKLV 323
           +A EL  +M+  G KP+V  +TVL+DG  K    +GW   A            ++ L  +
Sbjct: 576 EACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSM 635

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +    +P+V  YT +I G CK E +  A  L + M  +GL+P+ +TYT+LI G+C  G  
Sbjct: 636 KDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEI 695

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--LLKKAFQRELQADKITYT 441
            +A DL   M  +G  P+I++   +I G+   GR     +   L  A  R+ + +  T++
Sbjct: 696 AKAEDLFQEMIAKGMKPDIWSMMRVI-GVPMSGRRTPGLKDCSLSSALGRQGEQNDGTFS 754

Query: 442 ILLSE 446
           + + +
Sbjct: 755 VRIDD 759


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 213/448 (47%), Gaps = 21/448 (4%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFRGSI 277
           V     +Y +++   CR GR+      L  ++ +G  +D  T T L+   C DK      
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK----RT 143

Query: 278 KQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPNVHT 334
             A ++ L  M   G  P+V+++  L+ GLC +  +++A  L   +   R     P+V +
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203

Query: 335 YTAMISGYCKE--------EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           Y  +++G+ KE        + M++A  +L  M + G++P+  TY S+++G+C  G  + A
Sbjct: 204 YNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 263

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
              +  M  +G  PN+  Y+++++ LCK GR  EA ++     +R L+ D  TY  LL  
Sbjct: 264 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 323

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           H K+    ++  LF  MV+ G+ PDI  Y TLI   C   KM E+ K     ++ G+ P 
Sbjct: 324 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 383

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY ++I GY R   +  A+  F+ M   G +P+ ITY  ++ GL    +   A + Y 
Sbjct: 384 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 443

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEK 623
           S+   G      T   + +  CK   +  A+ + ++L   D +L  RT N +I  L    
Sbjct: 444 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 503

Query: 624 RVGMAALFF--HKLLGKDQNVDRVSLAA 649
           R+  A   F  H   G   +V   SL A
Sbjct: 504 RMDEAKDLFAAHSANGLVPDVRTYSLMA 531



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 222/486 (45%), Gaps = 29/486 (5%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASS 225
           GRL  GF+ +  +   G  +   T   ++ G+  +    +  + V   M   G   D  S
Sbjct: 106 GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDR---GAILDNATLTLLITAFCDKGFRG-----SI 277
           Y  ++   C   R  EA   L  M D    G+  D  +   ++  F  +G +      ++
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAM 225

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A E+L  MV+ G  P+  T+  ++ G C  G  ++A    LK +RSD  +PNV TY++
Sbjct: 226 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT-LKKMRSDGVEPNVVTYSS 284

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +++  CK  +   A  + + M ++GL P+  TY +L+ GHCK G    +  L DLM + G
Sbjct: 285 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIG 344

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P+I  YN +IDG C  G++ EA +LL       ++ D +TY  L++ + + +    AL
Sbjct: 345 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  MV +G++P+I  Y  ++      ++   +++ +     +G      TY  ++ G 
Sbjct: 405 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 464

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++     A++ FQ +       +  T+  +I  L K  ++DEA   + +    G+ P  
Sbjct: 465 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 524

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWI-----------RTVNTLIRKLCSEKRVG 626
            T   +A    +QG        LE LD  L++           R +N+++RKL     + 
Sbjct: 525 RTYSLMAENLIEQGS-------LEELD-DLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 576

Query: 627 MAALFF 632
            A  + 
Sbjct: 577 RAGTYL 582



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 180/397 (45%), Gaps = 12/397 (3%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTE--------ADRWLSAMLDRGAILDNATLTLLITAFC 269
           G   D  SY  ++  + + G  T+        A   L+ M+  G + D  T   ++  +C
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G     K+A   L++M   G +PNV T++ L++ LCK G + +A ++F  + +    +
Sbjct: 256 SSG---QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLE 311

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P++ TY  ++ G+CKE ++  +E L + M   G+ P+  TY +LI G C  G  + A  L
Sbjct: 312 PDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 371

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           +  M   G  P+I  Y  +I+G C+  R+ +A  L K+     +  + ITY I+L     
Sbjct: 372 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 431

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              T  A  L+  + K+G   ++  Y  ++   C+     E+ + FQ      L     T
Sbjct: 432 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 491

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           +  MI   L+ G +  A   F   +  G  PD  TY  +   L +Q  L+E    + SM 
Sbjct: 492 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 551

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             G S       ++  +  ++GD   A   L  +D+K
Sbjct: 552 ENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 588



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 165/364 (45%), Gaps = 56/364 (15%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTY 335
           + A  + +E++R+G   ++Y     +  + +        R + ++ R+   K  P VHTY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL--- 392
             +I   C+  +++     L  + ++G   +  T+T L+ G C     +R  D MD+   
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA---DKRTSDAMDIVLR 152

Query: 393 -MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL-------------------------- 425
            M + GC P++++YN ++ GLC + R QEA ELL                          
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 426 KKAFQRELQA--------------------DKITYTILLSEHLKQAETKQALGLFCRMVK 465
           K+  Q +L A                    D +TY  +L  +    + K+A+G   +M  
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P++  Y++L+   C+  +  E+ K F      GL P   TY +++ G+ ++G +  
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
           + K F  M +IG  PD ITY  LI G C   K+DEA +   SM+  G+ P  VT  TL  
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392

Query: 586 EYCK 589
            YC+
Sbjct: 393 GYCR 396



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 22/332 (6%)

Query: 357 RMKEQG---LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           RM   G   + P  +TY  LI   C+ G  +  +  +  + K+G   +   +  ++ GLC
Sbjct: 79  RMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLC 138

Query: 414 KKGRVQEAYEL-LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK---AGLN 469
              R  +A ++ L++  +     D  +Y  LL     +  +++AL L   M      G  
Sbjct: 139 ADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSP 198

Query: 470 PDIHAYTTLIAAFCRQ--------KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           PD+ +Y T++  F ++        + M ++ +     +  G+ P   TY S++ GY   G
Sbjct: 199 PDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 258

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
               A+   ++M   G  P+ +TY +L++ LCK  +  EA + ++SM  +G+ P   T  
Sbjct: 259 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 318

Query: 582 TLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           TL   +CK+G   +S     ++  +  K  I T NTLI   C   ++  A      ++  
Sbjct: 319 TLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 378

Query: 639 DQNVDRVSLAALKNA-CYES---NKYALFSDL 666
               D V+   L N  C  S   +  ALF ++
Sbjct: 379 GVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 15/283 (5%)

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           Y+ M   G    TP ++ Y  +I   C+ GR+   +  L    ++  + D IT+T LL  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 447 HLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ---EAITAG 502
                 T  A+ +   RM + G  PD+ +Y  L+   C + + +E+ +      +    G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 503 LFPTKETYTSMICGYLRDG--------NISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             P   +Y +++ G+ ++G         +  A++    M + G  PD +TY +++ G C 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRT 611
             +  EA    + M   G+ P  VT  +L    CK G S  A  I +S+ K+     I T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
             TL++  C E RV  +   F  ++      D ++   L + C
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 359



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 39/313 (12%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           GR  E   +   MT  GL    +T   ++   C+ G V  +E++FD M   GV  D  +Y
Sbjct: 293 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITY 352

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C  G++ EA + L++M+  G   D  T   LI  +C       +  A  L +E
Sbjct: 353 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS---RMDDALALFKE 409

Query: 287 MVRKGWKPNVYTHTVLIDGL-----------------------------------CKKGW 311
           MV  G  PN+ T+ +++ GL                                   CK   
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
           T++A R+F  L  +D  +    T+  MI    K  +M+ A+ L       GL+P+  TY+
Sbjct: 470 TDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 528

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            +     + G+ E   DL   M + GC+ +    N+I+  L ++G +  A   L    ++
Sbjct: 529 LMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 588

Query: 432 ELQADKITYTILL 444
               +  T + LL
Sbjct: 589 HFSLEASTASFLL 601


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 212/416 (50%), Gaps = 8/416 (1%)

Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDR 252
           VV    + G++  A EVF+ M +        +Y +++ + C  G   +A D + S   ++
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 253 GAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
               D  T   LI+  C  G   + + A +LL EM  K    NV+T++ +I  L K+   
Sbjct: 76  RVEPDRWTYNTLISGLCSSG---NTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E+++++  +++ +    P+V  +  ++ G+ +   M +A  + + M E G  P+  +Y  
Sbjct: 133 EESYKVLEEMMAA-GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 373 LIYGHCKVGNFERAYDLMDLMG--KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
           LI+G  K+G  + +  ++  M     G  PN+  ++ +I GLC+ G +++A E+     +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
              + +K TYT L++   +  +  QA  LF +M +A + PD  AY +LIA +C++  M E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 491 SEKFFQE-AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           +EK ++E +  AGL PT  T+ ++I G+ + G +  A +    M   G A D  TY  LI
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
           +GL + +KLDEA + Y+ M  K      V+ V+     CK G+   A  + E+  K
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 427



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 211/447 (47%), Gaps = 8/447 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC-AR 217
           +V S A+ G L +   +   M +        T N ++   C  G    A ++F  M   +
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            V  D  +Y  ++   C  G    A + LS M D+    +  T + +I +   +      
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA---KP 132

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++++++LEEM+  G  P+V+    ++ G  +    EKA  ++  +V S  YKP+  +Y  
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES-GYKPDNVSYHI 191

Query: 338 MISGYCKEEKMNRAEMLLERM--KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
           +I G  K  K++ +  +L  M  +  G +PN  T+++LI+G C+ G  E+A ++   M +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            GC PN Y Y  +I GLC+  +V +A EL +K  Q  +  D + Y  L++ + K+    +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 456 ALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           A  L+  M   AGL P I  + TLI  FC+  K+  + +   E  T GL     TY  +I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G  R   +  A++ +++M +     D ++  + + GLCK   +D+A   +E+    G  
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILE 601
           P   T   L+    K G    A  ++E
Sbjct: 432 PNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 194/415 (46%), Gaps = 23/415 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM----------------VSSFAEIGRLKEGFSMVIEM 179
           Y V   S  + G F +A ++ Q M                +S     G  +    ++ EM
Sbjct: 48  YNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEM 107

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
            +  +     T + ++    +    E + +V +EM A G   D  ++  ++  + R   +
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK--GWKPNVY 297
            +A      M++ G   DN +  +LI      G    + ++ ++L EM  +  G+ PNV 
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIG---KLDESLKILSEMAMRAAGYVPNVI 224

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T + LI GLC+ G  EKA  +F  ++ +   KPN +TYT +I+G C+ EK+ +A  L E+
Sbjct: 225 TFSTLIHGLCRTGELEKALEVFGSMLEA-GCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           M +  + P+   Y SLI G+CK G+ + A  L  ++ G  G  P I  +N +IDG CK G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           ++  A EL+ +   + L AD  TY IL++   +  +  +AL ++ +M +     D  +  
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           + +   C+   + ++   F+    +G  P  ET+  +    ++ G +  A K  +
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 177/381 (46%), Gaps = 22/381 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
           Y    + L S+GN E A +++  M               + S  +  + +E + ++ EM 
Sbjct: 84  YNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMM 143

Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
             G        N V+        +E A EV+  M   G   D  SY +++    ++G++ 
Sbjct: 144 AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD 203

Query: 241 EADRWLSAMLDRGA--ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           E+ + LS M  R A  + +  T + LI   C  G    +++A E+   M+  G KPN YT
Sbjct: 204 ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG---ELEKALEVFGSMLEAGCKPNKYT 260

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +T LI GLC+     +A  LF K+ ++    P+   Y ++I+GYCK   M+ AE L   M
Sbjct: 261 YTTLIAGLCRAEKVIQARELFEKMTQA-CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319

Query: 359 KE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
               GL P   T+ +LI G CK+G   RA +L+  MG +G   +   Y  +I GL +  +
Sbjct: 320 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATK 379

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + EA E+ K+  +++   D ++    +    K     QA  +F    K+G  P+   +  
Sbjct: 380 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 439

Query: 478 LIAAFCRQKKMKESEKFFQEA 498
           L  +  +  ++++++K  + A
Sbjct: 440 LSESLIKLGRVEDAQKLMEPA 460



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 46/365 (12%)

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  ++    K   + +A  + E MK +  +P+  TY  LI   C  G F +A DL   M 
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 395 KEG-CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
           +E    P+ + YN +I GLC  G  + A +LL +   + + A+  TY+ ++   +K+A+ 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI-------------- 499
           +++  +   M+ AG NPD+ A+  ++  F R   M+++ + +Q  +              
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 500 -----------------------TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
                                   AG  P   T++++I G  R G +  A++ F  M + 
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           GC P+  TY  LI+GLC+  K+ +A + +E M    I P  V   +L   YCK+G    A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 597 MIILESLDK----KLWIRTVNTLIRKLCSEKRVGMA----ALFFHKLLGKDQNVDRVSLA 648
             +   +      +  I T NTLI   C   ++G A    A    K L  D    R+ +A
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 649 ALKNA 653
            L  A
Sbjct: 373 GLSRA 377



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 141/306 (46%), Gaps = 22/306 (7%)

Query: 148 NFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITS--T 190
           N E+A EV Q MV S                A+IG+L E   ++ EM       + +  T
Sbjct: 166 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVIT 225

Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
            + ++   C  G +E A EVF  M   G   +  +Y  ++   CR  +V +A      M 
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285

Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKK 309
                 D      LI  +C    RGS+ +A +L  EM    G +P + T   LIDG CK 
Sbjct: 286 QACIPPDAVAYNSLIAGYCK---RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A  L  ++  +     +  TY  +I+G  +  K++ A  + ++M+E+  L +  +
Sbjct: 343 GKLGRANELVAEM-GTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVS 401

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
             S + G CK GN ++AY + +   K G  PN   +  + + L K GRV++A +L++ A 
Sbjct: 402 CVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461

Query: 430 QRELQA 435
            R++ A
Sbjct: 462 ARDITA 467



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 8/275 (2%)

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
           + Y  ++    K G   +A ++ + M  E C P++  YN +I+  C  G   +A +L  +
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF-Q 69

Query: 428 AFQRE--LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
           + +RE  ++ D+ TY  L+S       T+ A  L   M    +  ++  Y+++I +  ++
Sbjct: 70  SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129

Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
            K +ES K  +E + AG  P    +  ++ G+ R  N+  A + +Q M + G  PDN++Y
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 546 GALISGLCKQSKLDEACQFYESMI--GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
             LI GL K  KLDE+ +    M     G  P  +T  TL +  C+ G+   A+ +  S+
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 249

Query: 604 DK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +   K    T  TLI  LC  ++V  A   F K+
Sbjct: 250 LEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKM 284



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 4/169 (2%)

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
           + Y  ++    + G ++ A++ F+ M    C P  +TY  LI+  C   +  +A   ++S
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 568 MI-GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW--IRTVNTLIRKLCSEK 623
           M   K + P   T  TL    C  G++  A  +L  + DK +   + T +++I+ L  E 
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
           +   +     +++    N D  +   +      SN      ++ Q + E
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE 179


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 215/483 (44%), Gaps = 8/483 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  FA  GR+    S++ EM +N L       N  +    + G V+ + + F EM + G
Sbjct: 236 LIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHG 295

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  M+   C+  R+ EA      +     +        +I  +   G  G   
Sbjct: 296 LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY---GSAGKFD 352

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+ LLE    KG  P+V  +  ++  L KK   E+A R+F ++ R  +  PNV TY  +
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPNVPTYNIL 410

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I   C+E K+N A  + + M+  GL PN  T   +I   CK    E A  + + M  + C
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN   ++++IDGL K GRV +AY L +K          I YT L+    K    +    
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           ++  MV  G +PD+    T +    +  + ++    F+E    G  P   +Y+ +I G +
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G  +   + F  M + GC  D   Y A+I G CK  K+++A Q  E M  KG  P  V
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
           T  ++     K      A ++ E       KL +   ++LI       R+  A L   +L
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 636 LGK 638
           + K
Sbjct: 711 MQK 713



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 200/415 (48%), Gaps = 6/415 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +  +L+E  S+   M +        T + ++    + G V+ A  ++++M   G
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 504

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSI 277
               A  Y  ++ ++ + GR  +  +    M+  G   D   LTL I  + D  F+ G  
Sbjct: 505 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD---LTL-INTYMDCVFKAGET 560

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++   L  E+   G+ P+  ++++LI GL K G   + + LF  + +      + H Y A
Sbjct: 561 EKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM-KEQGCVLDTHAYNA 619

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I G+CK  K+N+A  LLE MK +G  P   TY S+I G  K+   + AY L +     G
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N+  Y+++IDG  K GR+ EAY ++++  Q+ L  +  T+  LL   +K  E  +AL
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M      P+   Y+ LI   CR +K  ++  F+QE    GL P   TYT+MI G 
Sbjct: 740 ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 799

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
            + GNI  A   F R    G  PD+ +Y A+I GL   +K  +A   +E    KG
Sbjct: 800 AKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 854



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 230/504 (45%), Gaps = 8/504 (1%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
            C+++   +  R++E   +  EM  + +P +  T N ++ + C  G +  A E+ D+M  
Sbjct: 374 NCILTCLGKKRRVEEALRIFEEMKRDAVPNV-PTYNILIDMLCREGKLNAALEIRDDMER 432

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +  +M+   C+  ++ EA      M D+    +  T + LI      G  G 
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL---GKCGR 489

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A+ L E+M+  G  P    +T LI    K G  E   +++ ++V +    P++    
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT-GCSPDLTLIN 548

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
             +    K  +  +   L   +   G +P+  +Y+ LI+G  K G     Y+L   M ++
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           GC  + +AYNA+IDG CK G+V +AY+LL++   +      +TY  ++    K     +A
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
             LF      G+  ++  Y++LI  F +  ++ E+    +E +  GL P   T+  ++  
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            ++   I+ A+  FQ M  + C P+ ITY  LI+GLC+  K ++A  F++ M   G+ P 
Sbjct: 729 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFH 633
            +T  T+     K G+   A  +         I    + N +I  L S  +   A   F 
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848

Query: 634 KLLGKDQNVDRVSLAALKNACYES 657
           +   K  N+   +   L +A +++
Sbjct: 849 ETRLKGCNIHTKTCVVLLDALHKA 872



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 10/424 (2%)

Query: 83  PPRLNLQIDIDSLTH----EQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIV 138
           P  L + I ID L      E+A ++   + ++  +  A++F     G  K       Y +
Sbjct: 437 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 496

Query: 139 CATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
               ++  G+   A  V   ++ SF + GR ++G  +  EM + G     + +N  +   
Sbjct: 497 -YEKMLDCGHVPGAI-VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCV 554

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
            + G  E    +F E+ A G   DA SY +++    + G   E      AM ++G +LD 
Sbjct: 555 FKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT 614

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
                +I  FC     G + +A++LLEEM  KG  P V T+  +IDGL K    ++A+ L
Sbjct: 615 HAYNAVIDGFCKS---GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           F +  +S+  K NV  Y+++I G+ K  +++ A +++E + ++GL PN  T+  L+    
Sbjct: 672 F-EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 730

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K      A      M    C PN   Y+ +I+GLC+  +  +A+   ++  +  L+ + I
Sbjct: 731 KAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTI 790

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TYT ++S   K     +A GLF R    G  PD  +Y  +I       K  ++   F+E 
Sbjct: 791 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 850

Query: 499 ITAG 502
              G
Sbjct: 851 RLKG 854



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 202/447 (45%), Gaps = 53/447 (11%)

Query: 184 LP-LITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           LP L+   L R+      +   ++AE+  +++     C +A +  LMV     M R TE 
Sbjct: 91  LPELVIGVLKRLKDANTAVNYFQWAEKQTEKV----HCPEAYNSLLMV-----MARNTEF 141

Query: 243 D---RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
           D   R L  M   G    ++ +++ + A C K  +  +++AF++++ M +  ++P    +
Sbjct: 142 DHLERILEEMSLSG-FGPSSNISIELVANCVKSRK--LREAFDIIQTMRKFKFRPAFSAY 198

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE--- 356
           T+LI  L +    +    LF ++ +   Y+ NVH +T +I  + +E +++ A  LL+   
Sbjct: 199 TILIGALSEVREPDPMLILFHQM-QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMK 257

Query: 357 --------------------------------RMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
                                            MK  GL+P+  TYTS+I   CK    +
Sbjct: 258 SNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLD 317

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            A +L + + +    P  YAYN +I G    G+  EAY LL++   +      I Y  +L
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 377

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
           +   K+   ++AL +F  M +  + P++  Y  LI   CR+ K+  + +   +   AGLF
Sbjct: 378 TCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLF 436

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
           P   T   MI    +   +  A   F+ M+   C P+ +T+ +LI GL K  ++D+A   
Sbjct: 437 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 496

Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQG 591
           YE M+  G  P  +   +L   + K G
Sbjct: 497 YEKMLDCGHVPGAIVYTSLIRSFFKCG 523



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 161/373 (43%), Gaps = 7/373 (1%)

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           F+  E+   K   P  Y   +++  + +    +   R+  ++  S  + P+ +    +++
Sbjct: 112 FQWAEKQTEKVHCPEAYNSLLMV--MARNTEFDHLERILEEMSLS-GFGPSSNISIELVA 168

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
              K  K+  A  +++ M++    P  + YT LI    +V   +    L   M + G   
Sbjct: 169 NCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEV 228

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N++ +  +I    ++GRV  A  LL +     L AD + Y + +    K  +   +   F
Sbjct: 229 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFF 288

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             M   GL PD   YT++I   C+  ++ E+ + F++       P    Y +MI GY   
Sbjct: 289 HEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSA 348

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G    A    +R    G  P  I Y  +++ L K+ +++EA + +E M    + P   T 
Sbjct: 349 GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTY 407

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
             L    C++G    A+ I + +++      + TVN +I +LC  +++  A   F  +  
Sbjct: 408 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 467

Query: 638 KDQNVDRVSLAAL 650
           K    + V+ ++L
Sbjct: 468 KVCTPNAVTFSSL 480


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 175/370 (47%), Gaps = 43/370 (11%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRA 351
           +P+V T+ +L++GLCK G    A R+   + R D + +P+V T   ++ G CK  ++  A
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 352 EMLLE-RMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
              +E RM    G  PNT TY  LI   C+VGN   AY+L++ M  EG   NI   N I+
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIV 288

Query: 410 DGLCKKGRVQEAYELL--KKAFQRELQADKITYTILLSEHLKQAETKQALGLF------- 460
            GLC+ GR   A E    K+    E + + +TY+ L+   L       A+ LF       
Sbjct: 289 GGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG 348

Query: 461 ------------------------CRMV----KAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                                   C M     +AG   D  AY  LIA FCR+K++ E+ 
Sbjct: 349 HSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAY 408

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  QE    G+ P   TY +++ G  + G+ ++  +   +M   GC P  IT+G L+ G 
Sbjct: 409 ELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           CK  K+DEA +   SM   GI P  V   TL    CK+GD   A+ + + + +K     +
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528

Query: 610 RTVNTLIRKL 619
            T N L++ L
Sbjct: 529 TTFNALLKGL 538



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 175/376 (46%), Gaps = 10/376 (2%)

Query: 199 CELGLVEYAEEVFDEMCARG--VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD--RGA 254
           C+ G V  A  V D M  +   +  D  +   +V   C+ GRV EA  ++   +    G 
Sbjct: 183 CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGC 242

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             +  T   LI AFC  G   +I  A+EL+E+M  +G   N+ T   ++ GLC+ G T  
Sbjct: 243 PPNTVTYNCLIDAFCRVG---NISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 315 AFRLFL-KLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTS 372
           A   F  K       K N  TY+ ++        +  A E+  E+M E G  P+   Y +
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE-GHSPDAIMYFT 358

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G  + G  E A  +   M + G   +  AYN +I G C+K R+ EAYELL++  +  
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           ++ D  TY  LLS   K  +      L  +M+  G  P +  + TL+  +C+  K+ E+ 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  +    +G+ P    Y ++I    + G++  A++ F  M +     +  T+ AL+ GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 553 CKQSKLDEACQFYESM 568
             ++  ++A +  + M
Sbjct: 539 RDKNMPEKAFELMDQM 554



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 41/325 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL------------- 203
            C++ +F  +G +   + +V +M N G+P    TLN +VG  C  G              
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 204 ------------------------VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
                                   V  A E+F E  + G   DA  Y  M+    + GR+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A    S+M + G  LD     +LI  FC K     + +A+ELL+EM   G +P+V T+
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRK---KRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             L+ G CK G       L  K++  D  +P+V T+  ++ GYCK  K++ A  +L  M 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMI-DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           E G+ PN   Y +LI   CK G+ + A +L D M ++    N+  +NA++ GL  K   +
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 420 EAYELLKKAFQRELQADKITYTILL 444
           +A+EL+ +  +     D +T  +L+
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLM 570



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 18/418 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+   + GR+ +   ++  M+   L +     TLN VV   C+ G V+ A    ++  +
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237

Query: 217 --RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +  +Y  ++ A+CR+G ++ A   +  M + G   +  TL  ++   C  G  
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297

Query: 275 GSIKQAFELLEEMVRKGW---KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G+   A E   E  R  W   K N  T++ L+  L        A  LF + + S+ + P+
Sbjct: 298 GA---ALEFFREK-RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM-SEGHSPD 352

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y  MISG  +  ++  A  +   MKE G   +T  Y  LI G C+      AY+L+ 
Sbjct: 353 AIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQ 412

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P++  YN ++ G CK G      ELL K      Q   IT+  L+  + K  
Sbjct: 413 EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVG 472

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +AL +   M ++G++P+   Y TLI   C++  +  + + F E     +     T+ 
Sbjct: 473 KIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532

Query: 512 SMICGYLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGLCKQSKLDEACQFYE 566
           +++ G LRD N+    K F+ M+Q+    C PD +T   L+  L    + D   +F +
Sbjct: 533 ALLKG-LRDKNMPE--KAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 12/255 (4%)

Query: 109 NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCA-TSLISNGNFERAHEVMQCMVSSFAEIG 167
           +E  S  A+ +F    G  +     RL   C+  S +    F+   +    +++ F    
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAG---RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E + ++ EM   G+     T N ++  +C+ G     +E+  +M   G      ++ 
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V  YC++G++ EA R L +M + G   +N     LI   C    RG +  A EL +EM
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK---RGDVDLAIELFDEM 519

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             K    NV T   L+ GL  K   EKAF L  ++ R +   P+  T   ++       +
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGE 578

Query: 348 MNRAEMLLERMKEQG 362
            +R    L+R  +QG
Sbjct: 579 TDR----LKRFMQQG 589



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 11/190 (5%)

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL--FPTKETYTSMICGYLRDGNI 523
           A + PD+  Y  L+   C+  ++ ++ +         L   P   T  +++ G  + G +
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRV 225

Query: 524 SSAVKYF-QRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             A+ +  QRM+ + GC P+ +TY  LI   C+   +  A +  E M  +G+    VT  
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLN 285

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR------TVNTLIRKLCSEKRVGMAALFFHKL 635
           T+    C+ G +  A+       + +W        T +TL+  L     VGMA   FH+ 
Sbjct: 286 TIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEK 344

Query: 636 LGKDQNVDRV 645
           + +  + D +
Sbjct: 345 MSEGHSPDAI 354


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 186/384 (48%), Gaps = 8/384 (2%)

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI AF   G+    ++A  +   M + G +P+ YT  VL++   K    +  ++LF ++ 
Sbjct: 95  LIDAFVKAGY---TQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM- 150

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           ++ N  PNV TY+ +I   CK   + +A  +   MK +G  PN  TYTS+I G  K G+ 
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           ++A+ L + M  EG       YN++I GL + GR   A +L ++   + LQ D +T+T L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +          +A  +F      G   D++ Y  LI   C+ K++ E+ + F E    GL
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   T+ +++ G  + G I  A      M + GC PD   Y  LI GL K  +++EA Q
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCS 621
               M   G  P  VT  TL  E CK G    A+ + E +  K +  TV  NT++  LC 
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCM 450

Query: 622 EKRVGMAALFFHKLLGKDQNVDRV 645
             RV  A   F+ +  K + VD V
Sbjct: 451 AGRVDEAYKLFNGM--KQETVDGV 472



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 25/446 (5%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           R++I  A    S G  E++ E ++ M               + +F + G  ++  ++   
Sbjct: 55  RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M  +GL   T T N ++    +   V+   ++F+EM  +    +  +Y +++ A C+ G 
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           V +A +    M  RG   +  T T +I      G  G + +AF L EEM  +G       
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGL---GKSGHVDKAFFLFEEMTSEGLVATRVV 231

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +  LI GL + G  + A +LF +++ S   +P+  T+T+++ G     + + A  + +  
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREML-SKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           ++ G   + N Y  LI   CK    + A+++   + ++G  P++Y +NA++DGLCK GR+
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +A+ LL    +     D   Y  L+    K    ++A  L   M   G  PD+  Y TL
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           I   C+  +++++ + F+E I+A  F    TY +++ G    G +  A K F  M Q   
Sbjct: 411 IDESCKGGRIEDALRLFEE-ISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469

Query: 539 ----APDNITYGALISGLCKQSKLDE 560
                PD +TY  L++G  +Q+ L E
Sbjct: 470 DGVIDPDFVTYTTLLNG-ARQAGLSE 494



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 44/276 (15%)

Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
           H     +V      GR  E   +  E  + G  L  +  N ++   C+   ++ A E+F 
Sbjct: 264 HVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           E+   G+  D  ++  ++   C+ GR                                  
Sbjct: 324 ELEEDGLVPDVYTFNALMDGLCKSGR---------------------------------- 349

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
               I  AF LL +M R G  P+V  +  LIDGL K G  E+A +L L++ +S  Y+P+V
Sbjct: 350 ----IHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM-QSLGYEPDV 404

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY  +I   CK  ++  A  L E +  +G   NT TY +++ G C  G  + AY L + 
Sbjct: 405 VTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNG 463

Query: 393 MGKEGC----TPNIYAYNAIIDGLCKKGRVQEAYEL 424
           M +E       P+   Y  +++G  + G  + A  L
Sbjct: 464 MKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 19/418 (4%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEV 210
           AH   Q +V      GR  +   +  +MT + G       L+ +V       L++ +  +
Sbjct: 147 AHSCQQIIVV-LCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 205

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEA----DRWLSAMLDRGAILDNATLTLLIT 266
             +    G   +A +Y  ++ +    GRV +     +RW+    DR    D  +  ++I 
Sbjct: 206 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ---DRVYSPDVWSFNVVIK 262

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C  G    +++A EL+E M   G  P+  TH +++DGLC+     +   +  +L R  
Sbjct: 263 GVCRVG---QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PNV T+T++ISGYCK  K+  A  +   M   G++PNT TY  LI G+ KVG+   A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            ++   M +  C P++  ++++IDG C+ G++ +A  +     Q  +Q +  T++I++  
Sbjct: 380 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 439

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHA----YTTLIAAFCRQKKMKESEKFFQEAITAG 502
             KQ  + +A+   C + +  L PDI      Y  +I   C+  K+ E+    +     G
Sbjct: 440 LCKQNRSDEAI---CLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 496

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
             P K TYT +I GY     IS A+ +F  M + GC+PD+IT    IS L K    +E
Sbjct: 497 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 554



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 174/347 (50%), Gaps = 12/347 (3%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+ ++   +I  LC+ G    A +LF ++     Y P+    + ++S       ++ +  
Sbjct: 145 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 204

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK----EGCTPNIYAYNAII 409
           LL +  E G       Y  L+      G   R +D++ L  +       +P+++++N +I
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRG---RVHDVVALFERWIQDRVYSPDVWSFNVVI 261

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL- 468
            G+C+ G+VQ+A EL+++  +     D +T+ I++    +  E  +   +  R+ + G+ 
Sbjct: 262 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 321

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P++  +T++I+ +C+  K++++   + + + +G+ P   TY  +I GY + G++ SAV+
Sbjct: 322 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 381

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +Q+M ++ C PD +T+ +LI G C+  +LD+A + +  M    I P   T   + +  C
Sbjct: 382 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 441

Query: 589 KQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGMAALF 631
           KQ  S  A+ +L  L+ +  I       N +I  LC   +V  A L 
Sbjct: 442 KQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLI 488



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 176/383 (45%), Gaps = 4/383 (1%)

Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
           A S + ++V  CR GR  +A +    M        +A     + + C       +  +  
Sbjct: 147 AHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCA--NLLDASAT 204

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           LL +    G +   Y +  L+  L  +G       LF + ++   Y P+V ++  +I G 
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPN 401
           C+  ++ +A  L+ERM E G  P+T T+  ++ G C+     R ++++  + ++G C PN
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  + ++I G CK G++++A  +        +  + +TY +L++ + K  +   A+ ++ 
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           +M +    PD+  +++LI  +CR  ++ ++ + + +     + P   T++ +I    +  
Sbjct: 385 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 444

Query: 522 NISSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
               A+     +N +   AP    Y  +I  LCK  K+DEA    + M  KG  P + T 
Sbjct: 445 RSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 504

Query: 581 VTLAYEYCKQGDSATAMIILESL 603
             L   YC +   + A++    +
Sbjct: 505 TILIIGYCMKSRISEAIMFFHEM 527



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 6/272 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V        +  G  ++  +  +G  +P +  T   V+   C+ G +E A  V+++M A
Sbjct: 295 IVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV-TFTSVISGYCKAGKLEDAMAVYNDMVA 353

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +Y +++  Y ++G +  A      M       D  T + LI  +C  G    
Sbjct: 354 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCG---Q 410

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +  +M +   +PNVYT +++I  LCK+  +++A  L  +L    +  P    Y 
Sbjct: 411 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYN 470

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK  K++ A ++ + M+E+G  P+  TYT LI G+C       A      M + 
Sbjct: 471 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 530

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           GC+P+    N  I  L K G   E   +++ A
Sbjct: 531 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLA 562


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 195/396 (49%), Gaps = 14/396 (3%)

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + + +EL +EM+ +G  P+V T+  LI+    +G   KA+ ++ ++V +    PNV TYT
Sbjct: 154 LARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMV-ARRIDPNVVTYT 212

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA----YDLMDL 392
            MI   C+E+ +  AE L   MKE G+ PN  TY +L+  H K  N + A    YDL+  
Sbjct: 213 TMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL-- 270

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
             K G  PN   +  +IDGLCK  R+ EA  +     + E+      Y  L+    +   
Sbjct: 271 --KCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
            ++AL  F  +++  L PD    + ++   C   +M+ + +F +    +G+      Y  
Sbjct: 329 AQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I  Y + GN+  A+    RM+++G  P+ +TY +LI G  K  +++ A   Y  M+ KG
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
           + P  VT   L + + K GD   A  + + +++K       TV+ L+  LC E RV  A 
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAV 508

Query: 630 LFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSD 665
            F  +  G+ ++    S+A   +  Y +  Y L+ D
Sbjct: 509 RFIMEYSGQKKSEKNPSIA--NSVTYMTLIYGLYID 542



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 199/446 (44%), Gaps = 13/446 (2%)

Query: 166 IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           + R+ E F    EM   G+     T N ++      G V  A EV+D+M AR +  +  +
Sbjct: 154 LARVWELFD---EMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVT 210

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  M+ A C    + +A+     M + G   +  T   L+++      R +IK A     
Sbjct: 211 YTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK---RDNIKHALVFYY 267

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           ++++ G  PN    T LIDGLCK     +A  +FL + R +   P V  Y ++I G  + 
Sbjct: 268 DLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYE-VAPTVPVYNSLIHGAFRS 326

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
                A    + +  + L P+  T + ++ G C  G  + A   +++M + G   N  AY
Sbjct: 327 GYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +ID  CK G + EA     +  +  ++ + +TY+ L+  H K  E + A+ ++  MV 
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ P++  YT LI    +   M  +    +E    G++    T + ++ G  R+  +  
Sbjct: 447 KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQD 506

Query: 526 AVKYF------QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           AV++       ++  +     +++TY  LI GL    + +EAC F+  M   G+ P   T
Sbjct: 507 AVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFT 566

Query: 580 RVTLAYEYCKQGDSATAMIILESLDK 605
              +    C  G    AM++   + K
Sbjct: 567 YTLVIRGLCMLGYVLNAMMLYADMVK 592



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 7/353 (1%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           VL+  L +    ++A  +F +L       P +    A++ G  K   + R   L + M  
Sbjct: 111 VLVIALSQMALPDEALSVFGRL----RELPALPACNAILDGLVKAHMLARVWELFDEMLG 166

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
           +G++P+  TY +LI      G+  +A+++ D M      PN+  Y  +I  LC++  + +
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGD 226

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  L  +  +  ++ +  TY  L+S H K+   K AL  +  ++K GL P+   +TTLI 
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C+  ++ E++  F +     + PT   Y S+I G  R G    A+ +FQ + +    P
Sbjct: 287 GLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRP 346

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII- 599
           D  T   ++ GLC   ++  A +F E M   GI+        L  EYCK G+   A++  
Sbjct: 347 DEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTC 406

Query: 600 --LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
             +  +  +  + T ++LI        + +A   + +++ K    + V+  AL
Sbjct: 407 TRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++ G ++   ++  EM   G+     T   ++    + G ++ A  +  EM  +G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR------GAILDNAT-LTLLITAFCDK 271
           + ++A +  ++V   CR  RV +A R++     +       +I ++ T +TL+   + D 
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYID- 542

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
              G   +A      M   G  P+ +T+T++I GLC  G+   A  L+  +V+
Sbjct: 543 ---GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVK 592


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 211/455 (46%), Gaps = 8/455 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL--GLVEYAEEVFDEMCA 216
           +++S A++       S+  +M + G+P    TL+ ++   C L  G +  A  +FD+M  
Sbjct: 67  LLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIG 126

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G   D  +Y  ++   C++G  + A R L +M+ +    +      +I + C       
Sbjct: 127 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR---Q 183

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           + +AF L  EMV KG  P+++T+  LI  LC     +    L  ++V S    P+V ++ 
Sbjct: 184 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFN 242

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
            ++   CKE K+  A  ++++M ++G  +PN  +Y +LI G+CK+   ++A  L   M +
Sbjct: 243 TVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 302

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
           +   P+   Y+ +I GLC   R+Q+A  L  +        + +TY ILL    K     +
Sbjct: 303 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 362

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A+ L   +  + L+PDI      I   CR  +++ +   F    + GL P   TY+ MI 
Sbjct: 363 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 422

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G  R G +  A K F+ M++ GC  +   Y  +  G  + ++   A Q  + M+ +G S 
Sbjct: 423 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 482

Query: 576 CEVTRVTLAYEYCKQG-DSATAMIILESLDKKLWI 609
              T           G D +   I+ +   +K WI
Sbjct: 483 DASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWI 517



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 6/408 (1%)

Query: 156 MQCMVSSFAEI--GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           +  +++SF  +  G++ E   +  +M   G      T   ++   C++G    A  +   
Sbjct: 99  LHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 158

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M  +    +  +Y  ++ + C+  +VTEA    S M+ +G   D  T   LI A C+   
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN--- 215

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
               K    LL EMV     P+V +   ++D LCK+G   +A  +  K+++     PNV 
Sbjct: 216 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVI 275

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           +Y  +I+GYCK +++++A  L   M  Q L+P+T TY++LI+G C V   + A  L   M
Sbjct: 276 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 335

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                 PN+  Y  ++D LCK   + EA  LLK      L  D     I +    +  E 
Sbjct: 336 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 395

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           + A  LF  +   GL PD+  Y+ +I   CR+  + E+ K F+E    G       Y ++
Sbjct: 396 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 455

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
             G+LR+   S A++  Q M   G + D  T    +  L     LD++
Sbjct: 456 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML-SDDGLDQS 502



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 6/292 (2%)

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC- 413
             RM      P+T  +  L+    K+ +      L   M   G  PNIY  + +I+  C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 414 -KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
             +G++ EA  L  K      + D +TY  L++   K   T  A+ L   MV+    P++
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            AY T+I + C+ +++ E+   F E +T G+ P   TY S+I                  
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GISPCEVTRVTLAYEYCKQG 591
           M      PD +++  ++  LCK+ K+ EA    + MI + G  P  ++  TL   YCK  
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQ 640
               AM +   + ++  I    T +TLI  LC  +R+  A   FH+++   Q
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)

Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC--KQSKLDEAC 562
           P+   +  ++    +  + S+ +    +M+  G  P+  T   LI+  C   + K+ EA 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKL 619
             ++ MIG+G  P  VT  TL    CK G+++ A+ +L S+ +K     V   NT+I  L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
           C +++V  A   F +++ K  + D  +  +L +A
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 212



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 57/136 (41%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           I   N +   +V    +      G L+    +   +++ GL     T + ++   C  GL
Sbjct: 370 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 429

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           ++ A ++F EM   G   +   Y  +   + R    + A + L  M+ RG   D +T+TL
Sbjct: 430 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 489

Query: 264 LITAFCDKGFRGSIKQ 279
            +    D G   S+KQ
Sbjct: 490 FVKMLSDDGLDQSLKQ 505


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 220/472 (46%), Gaps = 20/472 (4%)

Query: 145 SNGNFERAHEVMQ---------------CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITS 189
           S G F+ A+ +++               C+++   + G+  +   +  EM  + +P +  
Sbjct: 213 SAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNL-P 271

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T N ++G+ C+ G VE A +V D M   G+  +  +  +M+   C+  ++ EA      M
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGM 331

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
             +    D AT   LI      G +G +  A+ + E M+     PNV  +T LI    K 
Sbjct: 332 DYKVCSPDGATFCSLIDGL---GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
              E   +++ +++RS    P++      +    K  +  +   L E +K +G LP+T +
Sbjct: 389 DRKEDGHKMYKEMMRS-GCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRS 447

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ LI+   K G     Y+L   M  +GC  +  AYN +IDG CK G+V +AY+LL++  
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
                   +TY  ++    K     +A  LF      G+  +   Y++LI  F +  ++ 
Sbjct: 508 TMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVD 567

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+    +E +  GL P   T+  ++ G ++   I+ A+  FQ M  + C P+ ITY  LI
Sbjct: 568 EAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILI 627

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
           +GLCK  K ++A  F++ M  +G+ P  +T   +     K G+ A A  + E
Sbjct: 628 NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFE 679



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 216/479 (45%), Gaps = 8/479 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +  F ++G++   +    EM  NGL     T   ++G+ C+   ++ A E+F++M     
Sbjct: 138 IDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQ 197

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
              A +Y  M++ Y   G+  EA   L     +G I        ++T     G +G   +
Sbjct: 198 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL---GKKGKTDK 254

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  + EEM R    PN+ T+ ++I  LCK G  E AF++    ++     PNV T   MI
Sbjct: 255 ALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKV-RDAMKEAGLFPNVRTINIMI 312

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
              CK +K++ A  + E M  +   P+  T+ SLI G  K G  + AY + + M      
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN+  Y ++I    K  R ++ +++ K+  +     D +     +    K  ET++   L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F  +   G  PD  +Y+ LI +  +    +E+ + +      G       Y ++I G+ +
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G ++ A +  + M  +G  P  +TYG+++ GL K  +LDEA   +E     GI   +V 
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
             +L   + K G    A +++E + +K     + T N L+  L   + +  A + F  +
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 39/407 (9%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++ +F +  R ++G  M  EM  +G       LN  +    + G  E    +F+E+
Sbjct: 377 VYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI 436

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            ARG   D  SY                                   ++LI +    GF 
Sbjct: 437 KARGFLPDTRSY-----------------------------------SILIHSLVKAGF- 460

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
              ++ +EL   M  +G   +   +  +IDG CK G   KA++L L+ +++  + P V T
Sbjct: 461 --ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LEEMKTMGHHPTVVT 517

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y +++ G  K ++++ A ML E  K  G+  N   Y+SLI G  KVG  + AY +M+ M 
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G TPN+Y +N ++DGL K   + EA    +     +   ++ITY IL++   K  +  
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +A   +  M K GL P+   YT +I+   +   + ++   F+    +G  P   +Y +MI
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
            G         A + F+     GC+    T  AL+  L K   L++A
Sbjct: 698 EGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 4/311 (1%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           + P  +T   +++   K  K+  A  LL+ M+     P  + YT+LI    +VG  +R  
Sbjct: 22  FGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRML 81

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L + M + G   N++    +I    ++GRV  A  LL +       AD + Y + +   
Sbjct: 82  ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCF 141

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K  +   A   F  M   GL PD   YT+++   C+  ++ E+ + F++       P  
Sbjct: 142 GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y +MI GY   G    A    +R    GC P  + Y  +++ L K+ K D+A + +E 
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKR 624
           M    +       + +    CK G+   A  + +++ +      +RT+N +I +LC  ++
Sbjct: 262 MKRDAMPNLPTYNIIIGM-LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320

Query: 625 VGMAALFFHKL 635
           +  A   F  +
Sbjct: 321 LDEACSIFEGM 331



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 156/362 (43%), Gaps = 5/362 (1%)

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           ++L EM   G+ P  YT   L+    K     +AF L L+++R   ++P    YT +I  
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDL-LQMMRHFKFRPAFSAYTTLIGA 70

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
             +  + +R   L  +M+E G   N +  T+LI    + G  + A  L+D M       +
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           I  YN  ID   K G+V  A++   +     L  D +TYT ++    K     +A+ +F 
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
           +M +    P  +AY T+I  +    K  E+    +     G  P+   Y  ++    + G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
               A++ F+ M +    P+  TY  +I  LCK   ++ A +  ++M   G+ P   T  
Sbjct: 251 KTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTIN 309

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            +    CK      A  I E +D K+      T  +LI  L  + RV  A   + ++L  
Sbjct: 310 IMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDA 369

Query: 639 DQ 640
           DQ
Sbjct: 370 DQ 371



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 106/279 (37%), Gaps = 2/279 (0%)

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
           E +L  M   G  P   T   L+    K      A+DL+ +M      P   AY  +I  
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           L + G       L  +  +   + +    T L+    ++     AL L   M     + D
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
           I  Y   I  F +  K+  + KFF E    GL P   TYTSM+    +   +  AV+ F+
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +M Q    P    Y  +I G     K DEA    E    KG  P  V    +     K+G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 592 DSATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMA 628
            +  A+ I E + +     + T N +I  LC    V  A
Sbjct: 251 KTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAA 289



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 101/231 (43%)

Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
           NF+    ++  M   G  P  Y    ++    K  ++ EA++LL+     + +     YT
Sbjct: 6   NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+    +  E+ + L LF +M + G   ++H  TTLI  F R+ ++  +     E  + 
Sbjct: 66  TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
                   Y   I  + + G +  A K+F  M   G  PD++TY +++  LCK ++LDEA
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
            + +E M      PC     T+   Y   G    A  +LE    K  I +V
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSV 236


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 205/427 (48%), Gaps = 9/427 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R  E  +++  M  +G+     T   ++   C+   ++ A E+  EMC  GV  +   Y 
Sbjct: 130 RTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYS 189

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            ++  YCR GR  +  +    M   G   D    T  I   C KG    I +A ++ + M
Sbjct: 190 CLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKG---RIGKAVKVKDIM 246

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           V++G +PNV T+ VLI+ LCK+G   +A  L  ++       P+V TY  +I+G     +
Sbjct: 247 VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEM-DDKGVAPDVVTYNTLIAGLSGVLE 305

Query: 348 MNRAEMLLERMKEQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           M+ A  LLE M +   L  P+  T+ S+I+G CK+G   +A  + ++M + GC  N+  Y
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N +I G  +  +V  A  L+ +     L+ D  TY+IL++   K  E  +A      M +
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA-ITAGLFPTKETYTSMICGYLRDGNIS 524
            G+  ++  Y  L+AA C+   M+++   F E  +  GL      Y++M+ G  + G+I 
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAV--AYSTMMYGACKSGDIK 483

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
           +A +  Q M   G APD +TY  LI+   K   L+EA +  + M   G  P      +L 
Sbjct: 484 AAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLI 543

Query: 585 YEYCKQG 591
             Y  +G
Sbjct: 544 KGYSAEG 550



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 222/485 (45%), Gaps = 13/485 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITS---TLNRVVGIACELGLVEYAEEVFDEMCARGVCADA 223
           G L++  S++ +M+    P       +   V+   C     + A  +   M A GV AD 
Sbjct: 91  GDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADV 150

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
            +Y  ++   C    +  A   L  M   G   +    + L+  +C  G    + + F  
Sbjct: 151 VTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF-- 208

Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
            EEM R G +P+V   T  ID LCKKG   KA ++   +V+    +PNV TY  +I+  C
Sbjct: 209 -EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQR-GLEPNVVTYNVLINCLC 266

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM--GKEGCTPN 401
           KE  +  A  L   M ++G+ P+  TY +LI G   V   + A  L++ M  G     P+
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  +N++I GLCK GR+++A  + +   +R    + +TY  L+   L+  +   A+ L  
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            ++ +GL PD   Y+ LI  F +  ++  +E F +     G+      Y  ++    + G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +  A+  F  M+ + C  D + Y  ++ G CK   +  A Q  + M+ +G++P  VT  
Sbjct: 447 MMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGK 638
            L   + K GD   A  +L+ +    ++  V   ++LI+   +E ++       H++  K
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565

Query: 639 DQNVD 643
           +  +D
Sbjct: 566 NVAID 570



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 194/439 (44%), Gaps = 12/439 (2%)

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDR----GAILDNATLTLLITAFCDKGFRGSI 277
           DA SY +++ A CR G        L A + R     A  +  + T+++   C        
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCAS---RRT 131

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A  LL  M   G + +V T+  LI GLC     + A  L  ++  S    PNV  Y+ 
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGS-GVHPNVIVYSC 190

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ GYC+  +      + E M   G+ P+   +T  I   CK G   +A  + D+M + G
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN+  YN +I+ LCK+G V+EA  L  +   + +  D +TY  L++      E   A+
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAM 310

Query: 458 GLFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           GL   M++    + PD+  + ++I   C+  +M+++    +     G      TY  +I 
Sbjct: 311 GLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIG 370

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+LR   ++ A+     +   G  PD+ TY  LI+G  K  ++D A  F  +M  +GI  
Sbjct: 371 GFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRA 430

Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV--NTLIRKLCSEKRVGMAALFFH 633
                + L    C+ G    AM++   +D    +  V  +T++   C    +  A     
Sbjct: 431 ELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQ 490

Query: 634 KLLGKDQNVDRVSLAALKN 652
            +L +    D V+ + L N
Sbjct: 491 DMLDEGLAPDAVTYSILIN 509



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 12/277 (4%)

Query: 364 LPNTN---TYTSLIYGHCKVG-NFERAYDLMDLMGKEG---CTPNIYAYNAIIDGLCKKG 416
           LP+     +Y  ++   C+ G +  +A  L+  M +E      PN  +Y  ++ GLC   
Sbjct: 70  LPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASR 129

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           R  EA  LL+      ++AD +TY  L+      AE   AL L   M  +G++P++  Y+
Sbjct: 130 RTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYS 189

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            L+  +CR  + ++  K F+E    G+ P    +T  I    + G I  AVK    M Q 
Sbjct: 190 CLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQR 249

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
           G  P+ +TY  LI+ LCK+  + EA      M  KG++P  VT  TL        +   A
Sbjct: 250 GLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309

Query: 597 MIILESLDK-----KLWIRTVNTLIRKLCSEKRVGMA 628
           M +LE + +     +  + T N++I  LC   R+  A
Sbjct: 310 MGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQA 346



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 161/397 (40%), Gaps = 77/397 (19%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V  C++  +   GR ++   +  EM+  G+          +   C+ G +  A +V D M
Sbjct: 187 VYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIM 246

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
             RG+  +  +Y +++   C+ G V EA    + M D+G   D  T   LI      G  
Sbjct: 247 VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIA-----GLS 301

Query: 275 GSIKQ--AFELLEEMVRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRL------------ 318
           G ++   A  LLEEM++     +P+V T   +I GLCK G   +A  +            
Sbjct: 302 GVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCN 361

Query: 319 ----------FLKLVR------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
                     FL++ +            S   +P+  TY+ +I+G+ K  +++RAEM L 
Sbjct: 362 LVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLR 421

Query: 357 RMKEQGL-------LP---------------------------NTNTYTSLIYGHCKVGN 382
            M ++G+       +P                           +   Y++++YG CK G+
Sbjct: 422 TMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGD 481

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            + A  L+  M  EG  P+   Y+ +I+   K G ++EA  +LK+        D   +  
Sbjct: 482 IKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDS 541

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           L+  +  + +  + L L   M    +  D     TL+
Sbjct: 542 LIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 227/491 (46%), Gaps = 32/491 (6%)

Query: 78  HLRSSP--PRLNLQIDIDSLTHEQAITVVASLANEAGSMVA------LSFFYWAIGFAKF 129
           HL +SP  P L L     +  H  ++ + A L + +  +        LS    A  FA F
Sbjct: 45  HLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAPAFALF 104

Query: 130 RHFMRLYI-VCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
               RL + +C T+                M+      G+      ++ +M         
Sbjct: 105 ADIYRLRLPLCTTTF-------------NIMLRHLCATGKPVRALELLRQMPRPN----A 147

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARG-VCADASSYKLMVVAYCRMGRVTEADRWLS 247
            T N V+   C  G V+ A EV  EM  RG +  D  +Y  ++  +C++GR+ +A +   
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFD 207

Query: 248 AMLDRGAILDNATL-TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
            ML +G +  +A +   LI  +CD G    +  A +  E+MV++G    V T+ +L+  L
Sbjct: 208 EMLTKGEVAPSAVMYNALIGGYCDVG---KLDVALQYREDMVQRGIAMTVATYNLLMHAL 264

Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
                   A+ + L+ ++ + + P+V TY  +I+GYCKE    +A  + E M ++G+   
Sbjct: 265 FMDARASDAYAV-LEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
             TYTSLIY   + G  +    L ++  K+G  P++  YNA+I+  C  G ++ AYE++ 
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           +  ++ +  D +TY  L+          +A  L   M K G+ PD+ +Y TLI+ +  + 
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443

Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
            +K++ +   E +  G  PT  TY ++I G  +      A    + M   G  PD+ TY 
Sbjct: 444 DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYI 503

Query: 547 ALISGLCKQSK 557
           +LI GL  + +
Sbjct: 504 SLIEGLTTEDE 514



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 43/396 (10%)

Query: 224 SSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
           +++ +M+   C  G+   A   L  M    A+    T   +I  FC    RG ++ A E+
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPRPNAV----TYNTVIAGFC---ARGRVQAALEV 169

Query: 284 LEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           + EM  R G  P+ YT+  LI G CK G  E A ++F +++      P+   Y A+I GY
Sbjct: 170 MREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGY 229

Query: 343 CKEEKMN-----RAEML------------------------------LERMKEQGLLPNT 367
           C   K++     R +M+                              LE M++ G  P+ 
Sbjct: 230 CDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  LI G+CK GN ++A ++ + M ++G       Y ++I    +KG+VQE   L   
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
           A ++ ++ D + Y  L++ H    + ++A  +   M K  + PD   Y TL+  FC   +
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGR 409

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + E+     E    G+ P   +Y ++I GY   G+I  A++    M   G  P  +TY A
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           LI GLCK  + D+A    + M+ KGI+P + T ++L
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISL 505



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 182/373 (48%), Gaps = 8/373 (2%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G   +A ELL +M R    PN  T+  +I G C +G  + A  +  ++       P+ +T
Sbjct: 130 GKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYT 185

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQG-LLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           Y  +ISG+CK  +M  A  + + M  +G + P+   Y +LI G+C VG  + A    + M
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDM 245

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
            + G    +  YN ++  L    R  +AY +L++  +     D  TY IL++ + K+   
Sbjct: 246 VQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNE 305

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
           K+AL +F  M + G+      YT+LI  F R+ +++E+++ F  A+  G+ P    Y ++
Sbjct: 306 KKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNAL 365

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  +   G++  A +    M +    PD++TY  L+ G C   +LDEA    + M  +GI
Sbjct: 366 INSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGI 425

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAAL 630
            P  V+  TL   Y  +GD   A+ +  E +DK     + T N LI+ LC  ++   A  
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN 485

Query: 631 FFHKLLGKDQNVD 643
              +++ K    D
Sbjct: 486 LMKEMVAKGITPD 498


>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
          Length = 1295

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 241/521 (46%), Gaps = 45/521 (8%)

Query: 140  ATSLISN-GNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA 198
            A  L+SN G      +V   ++  F E    ++     I+  N G+       N ++   
Sbjct: 783  APMLVSNLGQSMTLLQVYAAVIRIFVESSMFEDALLTYIQAKNIGVD--RRLCNFLLKCL 840

Query: 199  CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
             E   + YA  +FD+M + G   +  SY +++  Y                         
Sbjct: 841  VEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTH----------------------- 877

Query: 259  ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
                         G R  +++AFELL EM   G +PN  T+   + GLC+      A+  
Sbjct: 878  -------------GERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDF 924

Query: 319  FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
               L +S     N + + A+I G+C E ++++A  +   MK+ G +P+ ++Y+ L+ G C
Sbjct: 925  LQTLSQSGGPCSN-YCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLC 983

Query: 379  KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
            K G+  + YD+++ M + G  PN  +Y++++ GLCK G+V  A ++ K       + D+I
Sbjct: 984  KQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQI 1043

Query: 439  TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
             Y+I+L    +  + K    L+  M+   + PD++ YT+LI A CR + ++++   F+  
Sbjct: 1044 NYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELM 1103

Query: 499  ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ-IGCAPDNITYGALISGLCKQSK 557
            +  GL P   T T ++  + + G +  A  +  RM+Q +G  P+   Y  +I+GLCK +K
Sbjct: 1104 LENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNK 1163

Query: 558  LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES-LDK--KLWIRTVNT 614
                   +  MI +G  P  V    +   + K      A+ +    LD+  K  I T ++
Sbjct: 1164 YSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSS 1223

Query: 615  LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY 655
            LI  LC++ R+  A      ++G+D  +D V   ++  ACY
Sbjct: 1224 LINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSII-ACY 1263



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 200/408 (49%), Gaps = 5/408 (1%)

Query: 200  ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
            E   +E A E+  EM + GV  +A++Y   +   CR  +VT A  +L  +   G    N 
Sbjct: 879  ERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNY 938

Query: 260  TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
                +I  FC     G + +A E+   M + G+ P+V+++++L+DGLCK+G   K + + 
Sbjct: 939  CFNAVIHGFC---CEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDML 995

Query: 320  LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             ++ R +   PN  +Y++++ G CK  ++  A  + + +++ G   +   Y+ +++G C+
Sbjct: 996  EEMAR-NGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQ 1054

Query: 380  VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
              + +   DL   M      P++Y Y ++I  LC+   +Q+A  + +   +  L  + +T
Sbjct: 1055 HLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVT 1114

Query: 440  YTILLSEHLKQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
             TIL+    KQ    +A     RM ++ G+ P++  Y  +I   C+  K       F + 
Sbjct: 1115 CTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADM 1174

Query: 499  ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
            I  G  P    Y+ +I G+++   +  A++ + +M   G  P+  TY +LI+GLC   +L
Sbjct: 1175 IKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRL 1234

Query: 559  DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             EA      MIG+ +    V   ++   YC++ +   AM + +   KK
Sbjct: 1235 PEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAMEMAQRDGKK 1282



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 38/406 (9%)

Query: 169  LKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
            L+E F ++ EM +NG+    +T    +   C    V  A +    +   G       +  
Sbjct: 883  LEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNA 942

Query: 229  MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
            ++  +C  G+V +A      M   G + D  + ++L+   C +G    + + +++LEEM 
Sbjct: 943  VIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQG---DLLKGYDMLEEMA 999

Query: 289  RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-------------------------- 322
            R G  PN  +++ L+ GLCK G    A ++F  L                          
Sbjct: 1000 RNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLK 1059

Query: 323  VRSD--------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
              SD        N  P+V+ YT++I   C+   +  A  + E M E GL PN  T T L+
Sbjct: 1060 AISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILV 1119

Query: 375  YGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
                K G    A+  +D M +  G  PN+  Y  +I+GLCK  +    + +     +R  
Sbjct: 1120 DSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGY 1179

Query: 434  QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
              D + Y+I++   +K  + ++AL L+ +M+  G+ P+I  Y++LI   C   ++ E+  
Sbjct: 1180 VPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMG 1239

Query: 494  FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              ++ I   L      YTS+I  Y R  N+ +A++  QR  +  C 
Sbjct: 1240 LIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAMEMAQRDGKKRCV 1285



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 5/300 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +V    + G L +G+ M+ EM  NG+     + + ++   C+ G V  A ++F  +   G
Sbjct: 978  LVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHG 1037

Query: 219  VCADASSYKLMVVAYCR-MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
               D  +Y +++   C+ +     +D W   M+      D    T LI A C      ++
Sbjct: 1038 FEHDQINYSIILHGCCQHLDLKAISDLWFD-MIHHNIAPDVYNYTSLIYALCR---HRNL 1093

Query: 278  KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            + A  + E M+  G  PN+ T T+L+D   K+G   +AF    ++ +S    PN+  Y  
Sbjct: 1094 QDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRV 1153

Query: 338  MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
            MI+G CK  K +    +   M ++G +P+   Y+ +I G  K    + A  L   M  EG
Sbjct: 1154 MINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEG 1213

Query: 398  CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              PNI+ Y+++I+GLC   R+ EA  L++     +L  D + YT +++ + ++   K A+
Sbjct: 1214 VKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAM 1273



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 49/352 (13%)

Query: 330  PNVHTYTAMISGYCKEEK--MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
            PNV +Y+ ++S Y   E+  +  A  LL  M+  G+ PN  TY + +YG C+      A+
Sbjct: 863  PNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAW 922

Query: 388  DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            D +  + + G   + Y +NA+I G C +G+V +A E+                       
Sbjct: 923  DFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEV----------------------- 959

Query: 448  LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
                        F  M K G  PD+H+Y+ L+   C+Q  + +     +E    G+ P +
Sbjct: 960  ------------FHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQ 1007

Query: 508  ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             +Y+S++ G  + G ++ A+K F+ +   G   D I Y  ++ G C+   L      +  
Sbjct: 1008 VSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFD 1067

Query: 568  MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE-SLDKKLW--IRTVNTLIRKLCSEKR 624
            MI   I+P      +L Y  C+  +   A+ + E  L+  L   I T   L+     +  
Sbjct: 1068 MIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGL 1127

Query: 625  VGMAALFF---HKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
            VG A LF    H+ LG   N+       + N   ++NKY+    +F+D+ +R
Sbjct: 1128 VGEAFLFLDRMHQSLGIVPNL--CMYRVMINGLCKTNKYSGVWNVFADMIKR 1177



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 105/201 (52%), Gaps = 8/201 (3%)

Query: 210  VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITAF 268
            VF+ M   G+  +  +  ++V ++ + G V EA  +L  M     I+ N  +  ++I   
Sbjct: 1099 VFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGL 1158

Query: 269  CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
            C       +   F    +M+++G+ P+V  ++++I+G  K    ++A RL+ K++  +  
Sbjct: 1159 CKTNKYSGVWNVFA---DMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKML-DEGV 1214

Query: 329  KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            KPN+ TY+++I+G C ++++  A  L+  M  + LL +   YTS+I  +C+  N + A +
Sbjct: 1215 KPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAME 1274

Query: 389  LMDLMGKEGCTPN---IYAYN 406
            +    GK+ C      IY Y+
Sbjct: 1275 MAQRDGKKRCVARCFCIYLYD 1295


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 257/573 (44%), Gaps = 38/573 (6%)

Query: 47  AFSSTSSSPSPPQSLVKTVCSMVLESYYQQ--FHLRS-SPPRLNLQIDIDSLTHEQAITV 103
           + ++ + SP PP+  V  +  ++ + ++ +  FH++  +P  L  Q+    L  +  +  
Sbjct: 28  SLATITGSPCPPRFDVAVIADLIEKQHWSKLGFHVKDINPNELFRQLISSELNPDLCLRY 87

Query: 104 VASLANEAGSMVALSFFYW-------AIGFAKFRHFMRLYIVCATSLISNGNFERAHEVM 156
              L       V+L   +        A  ++K R F+          + NG+  + H + 
Sbjct: 88  YTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFL-------DGFVRNGSDHQVHSIF 140

Query: 157 QC----------------MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACE 200
                             +V ++A   R + GF         G  L   +   ++    +
Sbjct: 141 HAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLK 200

Query: 201 LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT 260
                  E ++ EM  R +  +  ++ +++ A C+ G++ +A   +  M   G   +  +
Sbjct: 201 QNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVS 260

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
              LI  +C  G  G + +A  +L+EMV     PN+ T  +LIDG  K      + ++F 
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFK 320

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           +++  D   PNV TY ++I+G C   K+N A  + ++M   G+ PN  TY SLI G CK 
Sbjct: 321 EMLDQD-VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKIT 439
           G  + A D+ D +  +G  P    YN +ID  CK G++ + + L K+  +RE +  D  T
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL-KEEMEREGIVPDVGT 438

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y  L++   +    + A  LF ++   GL PD+  +  L+  +C + + +++    +E  
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMS 497

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI-TYGALISGLCKQSKL 558
             GL P   TY  M+ GY ++GN+ +A     +M +      N+ +Y  L+ G  ++ KL
Sbjct: 498 KMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           ++A      M+ KG+ P  +T   +  E   +G
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 212/447 (47%), Gaps = 17/447 (3%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D +C   + AD     ++V+AY    R              G  L   +   L+ A   +
Sbjct: 147 DNVCVNSIIAD-----MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQ 201

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                ++    L +EM+R+  +PNV+T  V+I+ LCK G   KA R  ++ ++   Y PN
Sbjct: 202 NRSADVEY---LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA-RDVMEDMKVYGYSPN 257

Query: 332 VHTYTAMISGYCK---EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           V +Y  +I GYCK     KM +A+ +L+ M E  + PN  T+  LI G  K  N   +  
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLK 317

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           +   M  +   PN+  YN++I+GLC  G++ EA  +  K     +Q + ITY  L++   
Sbjct: 318 VFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFC 377

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K    K+AL +F  +   G  P    Y  LI A+C+  K+ +     +E    G+ P   
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           TY  +I G  R+GNI +A K F ++   G  PD +T+  L+ G C + +  +A    + M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKR 624
              G+ P  +T   +   YCK+G+   A  +   ++K+  +R    + N L++    + +
Sbjct: 497 SKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556

Query: 625 VGMAALFFHKLLGKDQNVDRVSLAALK 651
           +  A +  +++L K    +R++   +K
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVK 583



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 22/318 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F +   L     +  EM +  +     T N ++   C  G +  A  + D+M + G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +  +Y  ++  +C+ G + EA     ++  +G         +LI A+C     G I 
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK---LGKID 418

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             F L EEM R+G  P+V T+  LI GLC+ G  E A +LF +L  ++   P++ T+  +
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--TNKGLPDLVTFHIL 476

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           + GYC   +  +A MLL+ M + GL P   TY  ++ G+CK GN + A ++   M KE  
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N+ +YN ++ G  +KG++++A  LL +  ++ L  ++ITY I+  E           
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE----------- 585

Query: 458 GLFCRMVKAGLNPDIHAY 475
                MV  G  PDI  +
Sbjct: 586 -----MVDKGFVPDIEGH 598


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 175/370 (47%), Gaps = 43/370 (11%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRA 351
           +P+V T+ +L++GLCK G    A R+   + R D + +P+V T   ++ G CK  ++  A
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 352 EMLLE-RMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
              +E RM    G  PNT TY  LI   C+VGN   AY+L++ M  EG   NI   N I+
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIV 288

Query: 410 DGLCKKGRVQEAYELL--KKAFQRELQADKITYTILLSEHLKQAETKQALGLF------- 460
            GLC+ GR   A E    K+    E + + +TY+ L+   L       A+ LF       
Sbjct: 289 GGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG 348

Query: 461 ------------------------CRMV----KAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                                   C M     +AG   D  AY  LIA FCR+K++ E+ 
Sbjct: 349 HSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAY 408

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  QE    G+ P   TY +++ G  + G+ ++  +   +M   GC P  IT+G L+ G 
Sbjct: 409 ELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           CK  K+DEA +   SM   GI P  V   TL    CK+GD   A+ + + + +K     +
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528

Query: 610 RTVNTLIRKL 619
            T N L++ L
Sbjct: 529 TTFNALLKGL 538



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 175/376 (46%), Gaps = 10/376 (2%)

Query: 199 CELGLVEYAEEVFDEMCARG--VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD--RGA 254
           C+ G V  A  V D M  +   +  D  +   +V   C+ GRV EA  ++   +    G 
Sbjct: 183 CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGC 242

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             +  T   LI AFC  G   +I  A+EL+E+M  +G   N+ T   ++ GLC+ G T  
Sbjct: 243 PPNTVTYNCLIDAFCRVG---NISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 315 AFRLFL-KLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTS 372
           A   F  K       K N  TY+ ++        +  A E+  E+M E G  P+   Y +
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE-GHSPDAIMYFT 358

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G  + G  E A  +   M + G   +  AYN +I G C+K R+ EAYELL++  +  
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           ++ D  TY  LLS   K  +      L  +M+  G  P +  + TL+  +C+  K+ E+ 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  +    +G+ P    Y ++I    + G++  A++ F  M +     +  T+ AL+ GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 553 CKQSKLDEACQFYESM 568
             ++  ++A +  + M
Sbjct: 539 RDKNMPEKAFELMDQM 554



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 41/325 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL------------- 203
            C++ +F  +G +   + +V +M N G+P    TLN +VG  C  G              
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 204 ------------------------VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
                                   V  A E+F E  + G   DA  Y  M+    + GR+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A    S+M + G  LD     +LI  FC K     + +A+ELL+EM   G +P+V T+
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRK---KRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             L+ G CK G       L  K++  D  +P+V T+  ++ GYCK  K++ A  +L  M 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMI-DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           E G+ PN   Y +LI   CK G+ + A +L D M ++    N+  +NA++ GL  K   +
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 420 EAYELLKKAFQRELQADKITYTILL 444
           +A+EL+ +  +     D +T  +L+
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLM 570



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 18/418 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+   + GR+ +   ++  M+   L +     TLN VV   C+ G V+ A    ++  +
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237

Query: 217 --RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +  +Y  ++ A+CR+G ++ A   +  M + G   +  TL  ++   C  G  
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297

Query: 275 GSIKQAFELLEEMVRKGW---KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G+   A E   E  R  W   K N  T++ L+  L        A  LF + + S+ + P+
Sbjct: 298 GA---ALEFFREK-RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM-SEGHSPD 352

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y  MISG  +  ++  A  +   MKE G   +T  Y  LI G C+      AY+L+ 
Sbjct: 353 AIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQ 412

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P++  YN ++ G CK G      ELL K      Q   IT+  L+  + K  
Sbjct: 413 EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVG 472

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +AL +   M ++G++P+   Y TLI   C++  +  + + F E     +     T+ 
Sbjct: 473 KIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532

Query: 512 SMICGYLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGLCKQSKLDEACQFYE 566
           +++ G LRD N+    K F+ M+Q+    C PD +T   L+  L    + D   +F +
Sbjct: 533 ALLKG-LRDKNMPE--KAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQ 587



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 12/255 (4%)

Query: 109 NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCA-TSLISNGNFERAHEVMQCMVSSFAEIG 167
           +E  S  A+ +F    G  +     RL   C+  S +    F+   +    +++ F    
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAG---RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E + ++ EM   G+     T N ++  +C+ G     +E+  +M   G      ++ 
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V  YC++G++ EA R L +M + G   +N     LI   C    RG +  A EL +EM
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK---RGDVDLAIELFDEM 519

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
             K    NV T   L+ GL  K   EKAF L  ++ R +   P+  T   ++       +
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGE 578

Query: 348 MNRAEMLLERMKEQG 362
            +R    L+R  +QG
Sbjct: 579 TDR----LKRFMQQG 589



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 11/190 (5%)

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL--FPTKETYTSMICGYLRDGNI 523
           A + PD+  Y  L+   C+  ++ ++ +         L   P   T  +++ G  + G +
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRV 225

Query: 524 SSAVKYF-QRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             A+ +  QRM+ + GC P+ +TY  LI   C+   +  A +  E M  +G+    VT  
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLN 285

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR------TVNTLIRKLCSEKRVGMAALFFHKL 635
           T+    C+ G +  A+       + +W        T +TL+  L     VGMA   FH+ 
Sbjct: 286 TIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEK 344

Query: 636 LGKDQNVDRV 645
           + +  + D +
Sbjct: 345 MSEGHSPDAI 354


>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 376

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 191/382 (50%), Gaps = 7/382 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILD 257
           CE G ++ AE V+ E+    V  DA  Y  M+  + R+GR+ +  + W   M+ R     
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELW--EMMGREGSRS 58

Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
            A+  +++    D G    + +   +LE M + G+  +  T+ +L+ G CK G+  K+  
Sbjct: 59  VASFNIMMRGLFDNG---KVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLH 115

Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
           + L++        +   Y+AMI+G CKE K+++A  +L  M + G  PN + Y +LI G 
Sbjct: 116 V-LEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGL 174

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
                FE A  ++  MG   C+P +  Y+ +I+GLCK  R  EAY+L+K+  Z+ L    
Sbjct: 175 VGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSV 234

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
           ITY++L+       + + AL L  ++   G  PD+  +  LI   C   K + +   + +
Sbjct: 235 ITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLD 294

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
                  P   T+ +++ G+ +D +I +A+  + R+ + G  PD I+Y   + GLC  ++
Sbjct: 295 MNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNR 354

Query: 558 LDEACQFYESMIGKGISPCEVT 579
           + +A  F    + K I P  +T
Sbjct: 355 ISDAILFLHDAVTKKIVPTIIT 376



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 33/273 (12%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  +   + +   +P+   YNA+++G  + GR+++ +EL +    RE     
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWE-MMGREGSRSV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            ++ I++       +  + + +   M K+G   D   Y  L+  FC+   + +S    + 
Sbjct: 60  ASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEI 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  ++  +  AV     M + GC P+   Y ALI+GL   SK
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            ++A +    M   G + C  T VT +                             TLI 
Sbjct: 180 FEDAVRVVREM---GTTNCSPTLVTYS-----------------------------TLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            LC  +R G A     ++L K  N   ++ + L
Sbjct: 208 GLCKVERFGEAYDLVKEMLZKGLNPSVITYSLL 240



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 100/230 (43%), Gaps = 7/230 (3%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIAC 199
             +I +G    AH V   +++      + ++   +V EM T N  P + +    + G+ C
Sbjct: 153 NGMIKSGCKPNAH-VYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGL-C 210

Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
           ++     A ++  EM  +G+     +Y L++   C   +V  A +  + +  +G   D  
Sbjct: 211 KVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQ 270

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
              +LI   C     G  + A  L  +M R    PN+ TH  L++G  K      A  ++
Sbjct: 271 MHNILIHGLCS---VGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIW 327

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
            +++R +  +P++ +Y   + G C   +++ A + L     + ++P   T
Sbjct: 328 ARILR-NGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTIIT 376


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 173/361 (47%), Gaps = 11/361 (3%)

Query: 214 MCARGV-----CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           M ARG        D ++   +V   C+ G V EA R    M   G   +  T T L+  +
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDN 327
              G R   ++ F L EEM R G +PN+YT+  LI   C+ G  E+A  LF ++ VR   
Sbjct: 84  FTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRG-- 138

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              NV +Y  +I+G C+  K+  A  LL+ M+ +G  P+  T+  L+ G+ K G    A 
Sbjct: 139 IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
              + M   G  P+   YN +I G C+   +  A   L    +R L+  K+TYTIL+   
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++    +A  +   M KAGL  D H Y  L+ A C +  MK++ K FQ     G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y  MI GY R+G+   A+K    M Q G  P++ +YG  I  LCK  K  EA    + 
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDD 378

Query: 568 M 568
           M
Sbjct: 379 M 379



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 5/354 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G ++ A  +L    + G    +V   T L++G CK G   +A R+F ++       PN  
Sbjct: 16  GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL-GLAPNEV 74

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYTA++ GY    +  +   L E M+  G+ PN  TY  LI   C+ G FERA  L D M
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G   N+ +YN +I GLC+ G++ +A +LL        +   IT+ +L+  + K  + 
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL  F +M  AG  P    Y  LIA FCR + M  + +   +    GL PTK TYT +
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R+ ++  A +    M + G   D  TYG L+  LC +  + +A + ++SM  KG+
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314

Query: 574 SPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTVN--TLIRKLCSEKR 624
            P  V    + Y Y ++G S  A+ +I+E   K L   + +    IR LC + +
Sbjct: 315 EPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 39/334 (11%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ ++GF++  EM   G+     T N ++G  C  G  E A  +FDEM  RG+  +  SY
Sbjct: 87  GQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G++     W                                  A +LL+ 
Sbjct: 147 NTLIAGLCRHGKL-----W---------------------------------DAAKLLDM 168

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G +P++ T  +L+DG  K G    A   F ++ ++  ++P+  TY  +I+G+C+  
Sbjct: 169 MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM-KAAGFQPSAVTYNMLIAGFCRAR 227

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M RA   L  MKE+GL P   TYT LI    +  +  +A++++  M K G   + + Y 
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYG 287

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++  LC +G +++A +L +   ++ ++   + Y +++  + ++  + +AL L   M + 
Sbjct: 288 VLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           GL P+  +Y   I   C+  K +E+E    +  T
Sbjct: 348 GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMET 381



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 7/372 (1%)

Query: 167 GRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G ++   +M+   T +G   L  +    +V   C+ G V  A  VFDEM   G+  +  +
Sbjct: 16  GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVT 75

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELL 284
           Y  ++  Y   G+  E    L   + RG +  N  T   LI  +C  G     ++A  L 
Sbjct: 76  YTALMHGYFTHGQ-REKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTG---EFERARSLF 131

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM  +G   NV ++  LI GLC+ G    A +L L ++R++  +P++ T+  ++ GY K
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL-LDMMRTEGTRPSIITFNLLVDGYGK 190

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             KM+ A     +MK  G  P+  TY  LI G C+  +  RA   +  M + G  P    
Sbjct: 191 AGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVT 250

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +ID   ++  + +A+E+L    +  L+ D  TY +L+     +   K A  LF  M 
Sbjct: 251 YTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMG 310

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P    Y  +I  + R+    ++ K   E    GL P   +Y   I    +D    
Sbjct: 311 EKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQ 370

Query: 525 SAVKYFQRMNQI 536
            A      M  I
Sbjct: 371 EAEALLDDMETI 382



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 19/262 (7%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FERA  +   M               ++     G+L +   ++  M   G      T 
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V    + G +  A   F++M A G    A +Y +++  +CR   +T A+R LS M +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG      T T+LI +F  +   G   +AFE+L  M + G + + +T+ VL+  LC +G 
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMG---KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A +LF  +      +P+   Y  MI GY +E    +A  L+  M+++GL+PN+ +Y 
Sbjct: 299 MKDARKLFQSMGEK-GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYG 357

Query: 372 SLIYGHCKVGNFERAYDLMDLM 393
             I   CK    + A  L+D M
Sbjct: 358 LTIRVLCKDDKCQEAEALLDDM 379


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 175/370 (47%), Gaps = 43/370 (11%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVHTYTAMISGYCKEEKMNRA 351
           +P+V T+ +L++GLCK G    A R+   + R D + +P+V T   ++ G CK  ++  A
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 352 EMLLE-RMKE-QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
              +E RM    G  PNT TY  LI   C+VGN   AY+L++ M  EG   NI   N I+
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIV 288

Query: 410 DGLCKKGRVQEAYELL--KKAFQRELQADKITYTILLSEHLKQAETKQALGLF------- 460
            GLC+ GR   A E    K+    E + + +TY+ L+   L       A+ LF       
Sbjct: 289 GGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG 348

Query: 461 ------------------------CRMV----KAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                                   C M     +AG   D  AY  LIA FCR+K++ E+ 
Sbjct: 349 HSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAY 408

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  QE    G+ P   TY +++ G  + G+ ++  +   +M   GC P  IT+G L+ G 
Sbjct: 409 ELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY 468

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWI 609
           CK  K+DEA +   SM   GI P  V   TL    CK+GD   A+ + + + +K     +
Sbjct: 469 CKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANV 528

Query: 610 RTVNTLIRKL 619
            T N L++ L
Sbjct: 529 TTFNALLKGL 538



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 175/376 (46%), Gaps = 10/376 (2%)

Query: 199 CELGLVEYAEEVFDEMCARG--VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD--RGA 254
           C+ G V  A  V D M  +   +  D  +   +V   C+ GRV EA  ++   +    G 
Sbjct: 183 CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGC 242

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             +  T   LI AFC  G   +I  A+EL+E+M  +G   N+ T   ++ GLC+ G T  
Sbjct: 243 PPNTVTYNCLIDAFCRVG---NISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGA 299

Query: 315 AFRLFL-KLVRSDNYKPNVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTS 372
           A   F  K       K N  TY+ ++        +  A E+  E+M E G  P+   Y +
Sbjct: 300 ALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE-GHSPDAIMYFT 358

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           +I G  + G  E A  +   M + G   +  AYN +I G C+K R+ EAYELL++  +  
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           ++ D  TY  LLS   K  +      L  +M+  G  P +  + TL+  +C+  K+ E+ 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  +    +G+ P    Y ++I    + G++  A++ F  M +     +  T+ AL+ GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 553 CKQSKLDEACQFYESM 568
             ++  ++A +  + M
Sbjct: 539 RDKNMPEKAFELMDQM 554



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 41/325 (12%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL------------- 203
            C++ +F  +G +   + +V +M N G+P    TLN +VG  C  G              
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 204 ------------------------VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
                                   V  A E+F E  + G   DA  Y  M+    + GR+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTH 299
            +A    S+M + G  LD     +LI  FC K     + +A+ELL+EM   G +P+V T+
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRK---KRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
             L+ G CK G       L  K++  D  +P+V T+  ++ GYCK  K++ A  +L  M 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMI-DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
           E G+ PN   Y +LI   CK G+ + A +L D M ++    N+  +NA++ GL  K   +
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 420 EAYELLKKAFQRELQADKITYTILL 444
           +A+EL+ +  +     D +T  +L+
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLM 570



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 18/404 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITS--TLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V+   + GR+ +   ++  M+   L +     TLN VV   C+ G V+ A    ++  +
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237

Query: 217 --RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +  +Y  ++ A+CR+G ++ A   +  M + G   +  TL  ++   C  G  
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297

Query: 275 GSIKQAFELLEEMVRKGW---KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G+   A E   E  R  W   K N  T++ L+  L        A  LF + + S+ + P+
Sbjct: 298 GA---ALEFFREK-RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM-SEGHSPD 352

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
              Y  MISG  +  ++  A  +   MKE G   +T  Y  LI G C+      AY+L+ 
Sbjct: 353 AIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQ 412

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M + G  P++  YN ++ G CK G      ELL K      Q   IT+  L+  + K  
Sbjct: 413 EMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVG 472

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
           +  +AL +   M ++G++P+   Y TLI   C++  +  + + F E     +     T+ 
Sbjct: 473 KIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532

Query: 512 SMICGYLRDGNISSAVKYFQRMNQI---GCAPDNITYGALISGL 552
           +++ G LRD N+    K F+ M+Q+    C PD +T   L+  L
Sbjct: 533 ALLKG-LRDKNMPE--KAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 7/215 (3%)

Query: 109 NEAGSMVALSFFYWAIGFAKFRHFMRLYIVCA-TSLISNGNFERAHEVMQCMVSSFAEIG 167
           +E  S  A+ +F    G  +     RL   C+  S +    F+   +    +++ F    
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAG---RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL E + ++ EM   G+     T N ++  +C+ G     +E+  +M   G      ++ 
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
            +V  YC++G++ EA R L +M + G   +N     LI   C    RG +  A EL +EM
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK---RGDVDLAIELFDEM 519

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
             K    NV T   L+ GL  K   EKAF L  ++
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 11/190 (5%)

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL--FPTKETYTSMICGYLRDGNI 523
           A + PD+  Y  L+   C+  ++ ++ +         L   P   T  +++ G  + G +
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRV 225

Query: 524 SSAVKYF-QRMNQI-GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
             A+ +  QRM+ + GC P+ +TY  LI   C+   +  A +  E M  +G+    VT  
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLN 285

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLWIR------TVNTLIRKLCSEKRVGMAALFFHKL 635
           T+    C+ G +  A+       + +W        T +TL+  L     VGMA   FH+ 
Sbjct: 286 TIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEK 344

Query: 636 LGKDQNVDRV 645
           + +  + D +
Sbjct: 345 MSEGHSPDAI 354


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 168/291 (57%), Gaps = 4/291 (1%)

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +L+ +FC +G    I+ A  + + + + G +P+V +   L++G  K G   + FRL  
Sbjct: 143 FNILMHSFCKEG---EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRL-K 198

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
           K +++   +P+V+TY+ +I+G CKE KM+    L + M + GL+PN  T+T+LI GHCK 
Sbjct: 199 KAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKN 258

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M  +  +P++  YN +I GLCKKG +++A +L+ +   + L+ DKITY
Sbjct: 259 GRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITY 318

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T L+    K+ + + A     RM+K  +  D  AYT LI+  C++ +  ++EK  +E ++
Sbjct: 319 TTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            GL P   TYT +I  + + G++ +  K  + M + G  P  +TY  L++G
Sbjct: 379 VGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 158/287 (55%)

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
           Y  +++ +  ++  +CKE ++  A+ + + + + GL P+  ++ +L+ G+ K+G+    +
Sbjct: 136 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXF 195

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
            L   M   G  P++Y Y+ +I+GLCK+ ++ +  EL  +     L  + +T+T L+  H
Sbjct: 196 RLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGH 255

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            K      A+ ++ +M+   L+PD+  Y TLI   C++  +K+++    E    GL P K
Sbjct: 256 CKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 315

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            TYT++I G  ++G++ +A +Y  RM +     D++ Y ALISGLC++ +  +A +    
Sbjct: 316 ITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           M+  G+ P   T   +  E+CK+GD  T   +++ + +  ++ +V T
Sbjct: 376 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 422



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 152/297 (51%), Gaps = 4/297 (1%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           G P      N ++   C+ G +  A+ VFD +   G+     S+  ++  Y ++G + E 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
            R   AM   G   D  T ++LI   C +     +    EL +EM+  G  PN  T T L
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKE---SKMDDXNELFDEMLDXGLVPNGVTFTTL 251

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG CK G  + A  ++ +++ S +  P++ TY  +I G CK+  + +A+ L++ M  +G
Sbjct: 252 IDGHCKNGRVDLAMEIYKQML-SQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKG 310

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L P+  TYT+LI G CK G+ E A++    M KE    +  AY A+I GLC++GR  +A 
Sbjct: 311 LKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAE 370

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           ++L++     L+ +  TYT++++E  K+ +      L   M + G  P +  Y  L+
Sbjct: 371 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLM 427



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 133/253 (52%), Gaps = 4/253 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ + ++G L E F +   M  +G+     T + ++   C+   ++   E+FDEM   G
Sbjct: 181 LMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXG 240

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+ GRV  A      ML +    D  T   LI   C K   G +K
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKK---GDLK 297

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L++EM  KG KP+  T+T LIDG CK+G  E AF    ++++ +N + +   YTA+
Sbjct: 298 QAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIK-ENIRLDDVAYTAL 356

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C+E +   AE +L  M   GL P   TYT +I   CK G+      LM  M ++G 
Sbjct: 357 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 416

Query: 399 TPNIYAYNAIIDG 411
            P++  YN +++G
Sbjct: 417 VPSVVTYNVLMNG 429



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
           + +++ ++ +I+ Y +   +  A       KE       +T   ++    K+  F+  + 
Sbjct: 67  RSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 126

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
             +   + G   ++Y +N ++   CK+G ++ A  +     +  L+   +++  L++ ++
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  +  +   L   M  +G+ PD++ Y+ LI   C++ KM +  + F E +  GL P   
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           T+T++I G+ ++G +  A++ +++M     +PD +TY  LI GLCK+  L +A    + M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEK 623
             KG+ P ++T  TL    CK+GD  TA      +I E++  +L       LI  LC E 
Sbjct: 307 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENI--RLDDVAYTALISGLCQEG 364

Query: 624 R 624
           R
Sbjct: 365 R 365


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 166/291 (57%), Gaps = 4/291 (1%)

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +L+  FC  G    I+ A  + + + + G +P+V ++  L++G  + G  ++ FRL  
Sbjct: 126 FNILMHRFCKDG---DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 182

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
            ++ S   +P+V+TY+ +I+G CKE KM+ A  L + M  +GL+PN  T+T+LI GHCK 
Sbjct: 183 AMLAS-GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M  +  +P++  YN +I GLCKKG +++A+ L+ +   +EL+ DKITY
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITY 301

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T L+    K+ +   A     RM++  +  D  AYT LI+  C++ +  ++EK  +E + 
Sbjct: 302 TTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 361

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
            GL P   TYT +I  + + G++    K  + M + G  P  +TY  L++G
Sbjct: 362 VGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKG 272
           +C + + ++A S  L+ V   R G+ + +  + + +  +G    D    + LITA+ + G
Sbjct: 10  LCTQQMLSEAKS--LIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLITAYLESG 67

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
           F     + + L  E   K W P      VL + L K  + +  +  + +++    Y  ++
Sbjct: 68  FLRDAIECYRLTRE--HKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYEEILEC-GYPASL 123

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           + +  ++  +CK+  +  A+ + + + + GL P+  +Y +L+ G+ ++G+ +  + L   
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 183

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M   G  P++Y Y+ +I+GLCK+ ++ +A EL  +   + L  + +T+T L+  H K   
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+ ++ +M+   L+PD+  Y TLI   C++  +K++     E     L P K TYT+
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTT 303

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
           +I G  ++G++ SA ++ +RM Q     D + Y ALISGLC++ +  +A +    M+  G
Sbjct: 304 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 363

Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
           + P   T   +  E+CK+GD      +L+ + +   + +V T
Sbjct: 364 LKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 405



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+   G P      N ++   C+ G +  A+ VFD +   G+     SY  ++  Y R+G
Sbjct: 113 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 172

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + E  R  SAML  G   D  T ++LI   C +     +  A EL +EM+ KG  PN  
Sbjct: 173 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE---SKMDDANELFDEMLVKGLVPNGV 229

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LIDG CK G  + A  ++ +++ S +  P++ TY  +I G CK+  + +A  L++ 
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQML-SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  + L P+  TYT+LI G CK G+ + A++    M +E    +  AY A+I GLC++GR
Sbjct: 289 MSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 348

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A ++L++     L+ D  TYT++++E  K+ +  +   L   M + G  P +  Y  
Sbjct: 349 SVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 408

Query: 478 LI 479
           L+
Sbjct: 409 LM 410



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 136/253 (53%), Gaps = 4/253 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +G L EGF +   M  +G+     T + ++   C+   ++ A E+FDEM  +G
Sbjct: 164 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 223

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+ GRV  A      ML +    D  T   LI   C K   G +K
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK---GDLK 280

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA  L++EM  K  KP+  T+T LIDG CK+G  + AF    ++++ +N + +   YTA+
Sbjct: 281 QAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ-ENIRLDEVAYTAL 339

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C+E +   AE +L  M   GL P++ TYT +I   CK G+  +   L+  M ++G 
Sbjct: 340 ISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGH 399

Query: 399 TPNIYAYNAIIDG 411
            P++  YN +++G
Sbjct: 400 VPSVVTYNVLMNG 412



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 8/280 (2%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++Y ++ +I    + G +++A E  +   + +      T   +L   +K    K   G +
Sbjct: 52  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 111

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             +++ G    ++ +  L+  FC+   ++ ++  F      GL P+  +Y +++ GY+R 
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++    +    M   G  PD  TY  LI+GLCK+SK+D+A + ++ M+ KG+ P  VT 
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231

Query: 581 VTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            TL   +CK G    AM     ++ +SL   L   T NTLI  LC +  +  A     ++
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLI--TYNTLIYGLCKKGDLKQAHHLIDEM 289

Query: 636 LGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             K+   D+++   L +  C E +  + F    + I E I
Sbjct: 290 SMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 329


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 195/389 (50%), Gaps = 11/389 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           S+ +++  +C +     A R+L  M   G   D     +++  +CD G  G     F  +
Sbjct: 81  SFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM 140

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
                K  KPNV T+  +I+GLCK G  + A  LF +L   D   P+  TY+ ++ G C+
Sbjct: 141 G----KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLP-HDLVDPDGFTYSTLVHGLCQ 195

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            E++  A  + + M E     +   Y ++  G CK    + A +++  M + GC P++  
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVT 255

Query: 405 YNAIIDGLCK-KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           YN II+G+C+ K R++EAY L ++    +   + +TY  ++    K  E ++ L LF  M
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGM 315

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR--DG 521
            KAGL+PD +AY +LI AF + +K+ E++   Q+A    + P    YT++I GY R    
Sbjct: 316 SKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKP 375

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT-- 579
            +  A+  FQ M      P+ ITY  ++ GLCK  + DEA Q ++ M     SP  +T  
Sbjct: 376 RVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFK 435

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW 608
            +T+   +C + D     I ++ + K  W
Sbjct: 436 VMTMGMIHCGKTDKFER-IFMDMVYKGRW 463



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 156/347 (44%), Gaps = 43/347 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++GR+        +M     P + +T N V+   C+ G +++A  +F  +    
Sbjct: 120 VLKGYCDLGRVGRALIKFGKMGKTCKPNV-ATYNTVINGLCKFGKIDWAVHLFTRLPHDL 178

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  +V   C+  R+  A +    ML+     D      +   FC +     + 
Sbjct: 179 VDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKER---RVD 235

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A E+L+ M+++G KP+V T+  +I+G+C+ K   E+A+RLF ++V SD   PN  TY  
Sbjct: 236 EALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDC-PPNAVTYGT 294

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI G  K  ++ R   L + M + GL P+   Y SLIY   KV   + A  ++    +  
Sbjct: 295 MILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH 354

Query: 398 CTPNIY-------------------------------------AYNAIIDGLCKKGRVQE 420
             P++Y                                      YN ++ GLCK GR  E
Sbjct: 355 VGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDE 414

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           AY++ ++ F+ +   +++T+ ++    +   +T +   +F  MV  G
Sbjct: 415 AYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 33/171 (19%)

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G   D++ YT L+    R ++ +E+ +FF+  + A   P+  ++T +I  +    N  
Sbjct: 37  QEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPG 96

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +Y   M  +G  PD   Y  ++ G C   ++  A   +  M GK   P         
Sbjct: 97  RAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPN-------- 147

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                                   + T NT+I  LC   ++  A   F +L
Sbjct: 148 ------------------------VATYNTVINGLCKFGKIDWAVHLFTRL 174


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 199/415 (47%), Gaps = 13/415 (3%)

Query: 152 AHEVMQCMVSSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEV 210
           AH   Q +V      GR  +   +  +MT + G       L+ +V       L++ +  +
Sbjct: 142 AHSCQQIIVV-LCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 200

Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEA----DRWLSAMLDRGAILDNATLTLLIT 266
             +    G   +A +Y  ++ +    GRV +     +RW+    DR    D  +  ++I 
Sbjct: 201 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ---DRLYSPDVWSFNVVIK 257

Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
             C  G    +++A EL+E M   G  P+  TH +++DGLC+     +   +  +L R  
Sbjct: 258 GVCRVG---QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              PNV T+T++ISGYCK  K+  A  +   M   G++PNT TY  LI G+ KVG+   A
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
            ++   M +  C P++  ++++IDG C+ G++ +A  +     Q  +Q +  T++I++  
Sbjct: 375 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 434

Query: 447 HLKQAETKQALGLFCRM-VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
             KQ  + +A+ L   + ++  + P    Y  +I   C+  K+ E+    +     G  P
Sbjct: 435 LCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 494

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDE 560
            K TYT +I GY     IS A+ +F  M + GC+PD+IT    IS L K    +E
Sbjct: 495 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 549



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 190/391 (48%), Gaps = 8/391 (2%)

Query: 193 RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD-RWLSAMLD 251
           +++ + C  G    A ++FD+M      +  + +   +V+ C    + +A    LS   +
Sbjct: 147 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 206

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR-KGWKPNVYTHTVLIDGLCKKG 310
            G  ++      L+++      RG +     L E  ++ + + P+V++  V+I G+C+ G
Sbjct: 207 FGCRVEAYAYNKLMSSLIG---RGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVG 263

Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNT 369
             +KA  L  ++       P+  T+  ++ G C+  +++R   +L R++  G+ +PN  T
Sbjct: 264 QVQKALELVERM-NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 322

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           +TS+I G+CK G  E A  + + M   G  PN   YN +I+G  K G +  A E+ ++  
Sbjct: 323 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 382

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           +     D +T++ L+  + +  +   AL ++  M +  + P+++ ++ +I + C+Q +  
Sbjct: 383 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 442

Query: 490 ESEKFFQE-AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           E+ +   E  +   + P    Y  +I    + G +  A    + M + GC PD  TY  L
Sbjct: 443 EAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 502

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           I G C +S++ EA  F+  M+  G SP  +T
Sbjct: 503 IIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 533



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 178/387 (45%), Gaps = 4/387 (1%)

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A S + ++V  CR GR  +A +    M        +A     + + C       + 
Sbjct: 138 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCA--NLLD 195

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            +  LL +    G +   Y +  L+  L  +G       LF + ++   Y P+V ++  +
Sbjct: 196 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVV 255

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
           I G C+  ++ +A  L+ERM E G  P+T T+  ++ G C+     R ++++  + ++G 
Sbjct: 256 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGV 315

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
           C PN+  + ++I G CK G++++A  +        +  + +TY +L++ + K  +   A+
Sbjct: 316 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 375

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            ++ +M +    PD+  +++LI  +CR  ++ ++ + + +     + P   T++ +I   
Sbjct: 376 EVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSL 435

Query: 518 LRDGNISSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
            +      A++    +N +   AP    Y  +I  LCK  K+DEA    + M  KG  P 
Sbjct: 436 CKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPD 495

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
           + T   L   YC +   + A++    +
Sbjct: 496 KYTYTILIIGYCMKSRISEAIMFFHEM 522



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 174/347 (50%), Gaps = 12/347 (3%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+ ++   +I  LC+ G    A +LF ++     Y P+    + ++S       ++ +  
Sbjct: 140 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 199

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK----EGCTPNIYAYNAII 409
           LL +  E G       Y  L+      G   R +D++ L  +       +P+++++N +I
Sbjct: 200 LLSKASEFGCRVEAYAYNKLMSSLIGRG---RVHDVVALFERWIQDRLYSPDVWSFNVVI 256

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL- 468
            G+C+ G+VQ+A EL+++  +     D +T+ I++    +  E  +   +  R+ + G+ 
Sbjct: 257 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 316

Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
            P++  +T++I+ +C+  K++++   + + + +G+ P   TY  +I GY + G++ SAV+
Sbjct: 317 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 376

Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
            +Q+M ++ C PD +T+ +LI G C+  +LD+A + +  M    I P   T   + +  C
Sbjct: 377 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 436

Query: 589 KQGDSATAMIILESLDKKLWIRT----VNTLIRKLCSEKRVGMAALF 631
           KQ  S  A+ +L  L+ +  I       N +I  LC   +V  A L 
Sbjct: 437 KQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLI 483



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG--LPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           +V        +  G  ++  +  +G  +P +  T   V+   C+ G +E A  V+++M A
Sbjct: 290 IVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV-TFTSVISGYCKAGKLEDAMAVYNDMVA 348

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
            G+  +  +Y +++  Y ++G +  A      M       D  T + LI  +C  G    
Sbjct: 349 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCG---Q 405

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +  A  +  +M +   +PNVYT +++I  LCK+  +++A RL  +L    +  P    Y 
Sbjct: 406 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYN 465

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            +I   CK  K++ A ++ + M+E+G  P+  TYT LI G+C       A      M + 
Sbjct: 466 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 525

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           GC+P+    N  I  L K G   E   +++ A
Sbjct: 526 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLA 557


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 196/400 (49%), Gaps = 11/400 (2%)

Query: 182 NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTE 241
           NGL     + N V+   C +G V+ A EVF  M  R   AD  +Y  ++   C  GR+ E
Sbjct: 174 NGL-----SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDE 228

Query: 242 ADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTV 301
           A   L  M   G   +     +LI+A C K   G + +A +L++ M  KG  PN  T+  
Sbjct: 229 AVSLLDEMQVEGTFPNPVAFNVLISALCKK---GDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 302 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQ 361
           L+ GLC KG  +KA  L  ++V ++   PN  T+  ++ G+ K  +      +L  ++E+
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMV-ANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344

Query: 362 GLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEA 421
           G   N  +Y+SLI G  K G  E    L   M ++GC PN   Y+A+IDGLC++G+  EA
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEA 404

Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
            E L +   +    +  TY+ L+  + +  +  +A+ ++  M     N     Y+ LI  
Sbjct: 405 KEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILING 464

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM--NQIGCA 539
            C+  K+KE+   +++ ++ G+      Y+SMI G+     +   +K F +M  +     
Sbjct: 465 LCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 524

Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
           PD +TY  L++  C ++ +  A     +M+ +G  P  +T
Sbjct: 525 PDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 193/389 (49%), Gaps = 11/389 (2%)

Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
           +  L+I A C     G++ QA E+   M  +    + YT++ L+ GLC +G  ++A  L 
Sbjct: 177 SFNLVIKALCR---VGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL- 232

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
           L  ++ +   PN   +  +IS  CK+  ++RA  L++ M  +G +PN  TY SL++G C 
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  ++A  L++ M    C PN   +  ++DG  K GR  +   +L    ++  + ++ +
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS 352

Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
           Y+ L+S   K+ + +  + L+  MV+ G  P+   Y+ LI   CR+ K  E++++  E  
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 412

Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
             G  P   TY+S++ GY   G+I  A+  ++ M    C    + Y  LI+GLCK  KL 
Sbjct: 413 NKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLK 472

Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYC-----KQGDSATAMIILESLDKKLWIRTVNT 614
           EA   ++ M+ +GI    V   ++ + +C     +QG      ++  +   +  + T N 
Sbjct: 473 EALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNI 532

Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           L+   C++  V  A    + +L  DQ  D
Sbjct: 533 LLNAFCTKNSVSRAIDILNTML--DQGCD 559



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 187/388 (48%), Gaps = 6/388 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +   +G + +   +   M++        T + ++   C  G ++ A  + DEM   G
Sbjct: 181 VIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 240

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  ++ +++ A C+ G ++ A + +  M  +G + +  T   L+   C    +G + 
Sbjct: 241 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC---LKGKLD 297

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A  LL  MV     PN  T   L+DG  K G      R+ + L     Y+ N  +Y+++
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSL-EEKGYRGNEFSYSSL 356

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG  KE K      L + M E+G  PNT  Y++LI G C+ G  + A + +  M  +G 
Sbjct: 357 ISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           TPN + Y++++ G  + G + +A  + K+    +    ++ Y+IL++   K  + K+AL 
Sbjct: 417 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALI 476

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI--TAGLFPTKETYTSMICG 516
           ++ +M+  G+  D+ AY+++I  FC  + +++  K F + +     L P   TY  ++  
Sbjct: 477 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNA 536

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +    ++S A+     M   GC PD IT
Sbjct: 537 FCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD---NYKPNVHTYTAMISGYCKEEKMN 349
           K  V +   +++ + ++G  + A   +  ++ S+   N +PN  ++  +I   C+   ++
Sbjct: 133 KQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVD 192

Query: 350 RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
           +A  +   M ++  + +  TY++L++G C  G  + A  L+D M  EG  PN  A+N +I
Sbjct: 193 QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLI 252

Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
             LCKKG +  A +L+   F +    +++TY  L+     + +  +A+ L  RMV     
Sbjct: 253 SALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 312

Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           P+   + TL+  F +  +  +  +        G    + +Y+S+I G  ++G     ++ 
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           ++ M + GC P+ I Y ALI GLC++ K DEA ++   M  KG +P   T  +L + Y +
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 432

Query: 590 QGDSATAMIILESL-DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
            GD   A+++ + + D       V  + LI  LC   ++  A + + ++L +   +D V+
Sbjct: 433 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492

Query: 647 LAAL 650
            +++
Sbjct: 493 YSSM 496



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 171/430 (39%), Gaps = 88/430 (20%)

Query: 102 TVVASLANEAGSMVALSFFYWAIGFAKFRHFMR---LYIVCATSLISNGNFERAHEVMQC 158
           TV+  +  E    +AL F+   I    F +       + +   +L   GN ++A EV + 
Sbjct: 141 TVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRG 200

Query: 159 M---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           M               +      GR+ E  S++ EM   G        N ++   C+ G 
Sbjct: 201 MSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGD 260

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           +  A ++ D M  +G   +  +Y  +V   C  G++ +A   L+ M+    + ++ T   
Sbjct: 261 LSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 320

Query: 264 LITAFC----------------DKGFRGSI----------------KQAFELLEEMVRKG 291
           L+  F                 +KG+RG+                 +   +L +EMV KG
Sbjct: 321 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 380

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY--------- 342
            KPN   ++ LIDGLC++G  ++A + +L  +++  + PN  TY++++ GY         
Sbjct: 381 CKPNTIVYSALIDGLCREGKPDEA-KEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKA 439

Query: 343 --------------------------CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
                                     CK  K+  A ++ ++M  +G+  +   Y+S+I+G
Sbjct: 440 ILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHG 499

Query: 377 HCKVGNFERAYDLMDLM--GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            C     E+   L + M        P++  YN +++  C K  V  A ++L     +   
Sbjct: 500 FCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCD 559

Query: 435 ADKITYTILL 444
            D IT  I L
Sbjct: 560 PDFITCDIFL 569



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 5/285 (1%)

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
           +YK    ++ ++I  +         E LL +MK +  +    ++  +   + K    ++A
Sbjct: 60  SYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKA 119

Query: 387 YDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ----RELQADKITYT 441
            DL   MG E  C   + ++N +++ + ++G    A E             +Q + +++ 
Sbjct: 120 LDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFN 179

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
           +++    +     QA+ +F  M       D + Y+TL+   C + ++ E+     E    
Sbjct: 180 LVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVE 239

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G FP    +  +I    + G++S A K    M   GC P+ +TY +L+ GLC + KLD+A
Sbjct: 240 GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKA 299

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
                 M+     P ++T  TL   + K G +   + +L SL++K
Sbjct: 300 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 27/248 (10%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   ++      G+  E    +IEM N G    + T + ++    E G +  A  V+ EM
Sbjct: 387 VYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEM 446

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
                      Y +++   C+ G++ EA      ML RG  LD    + +I  FC+    
Sbjct: 447 TDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL- 505

Query: 275 GSIKQAFELLEEMV--RKGWKPNVYTHTVLIDGLCKKGWTEKAF---------------- 316
             ++Q  +L  +M+      +P+V T+ +L++  C K    +A                 
Sbjct: 506 --VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 563

Query: 317 --RLFLKLVRSDNYKP---NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
              +FLK +R DN  P          ++    K ++   A  ++E M ++ LLP  +T+ 
Sbjct: 564 TCDIFLKTLR-DNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWA 622

Query: 372 SLIYGHCK 379
             +   CK
Sbjct: 623 LAVQQLCK 630


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 208/458 (45%), Gaps = 47/458 (10%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G   D  SY  ++  + + G   +A      MLDR    D  T + +I A C KG   ++
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALC-KG--QAM 247

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN------ 331
            +A E+L  MV+ G  PN  T+T ++ G C  G  ++A   FLK VRSD  +P+      
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIG-FLKKVRSDGVEPDGLEPDI 306

Query: 332 ------------------------------VH----TYTAMISGYCKEEKMNRAEMLLER 357
                                         +H     Y  +I  Y K+ K++ A ++  +
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M++QGL P+  TY ++I   CK G  E A    + M  EG +P    YN++I GLC   +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            + A EL+ +   R +  + I +  ++  H K+    ++  LF  MV+ G+ PDI  Y+T
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI  +C   KM E+ K     ++ GL P   TY ++I GY +   +  A+  F+ M   G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            +PD ITY  ++ GL +  +   A + Y  +   G      T   + +  CK   +  A+
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606

Query: 598 IILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
            + ++L   D KL  RT N +I  L    R G A   F
Sbjct: 607 RMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLF 644



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 240/509 (47%), Gaps = 19/509 (3%)

Query: 179 MTNNGLPLITSTLNR---VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           M   G   +T T++    ++G  C    ++        +  +G   +A ++  ++   C 
Sbjct: 75  MARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134

Query: 236 MGRVTEA-DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK---G 291
             R ++A D  L  M +   + D  + T+L+   CD+      ++A EL   M      G
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN---RSQEALELPHMMADGRGGG 191

Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
             P+V ++T +I+G  K+G + KA+  + +++      P+V TY+++I+  CK + M++A
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEML-DRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM-----DLMGKEGCTPNIYAYN 406
             +L  M + G++PN  TYTS+++G+C  G  + A   +     D +  +G  P+I  Y 
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++ G   KG +   + LL    +  +  D   Y IL+  + KQ +  +A+ +F +M + 
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           GLNPD   Y  +I   C+  +++++  +F++ I  GL P    Y S+I G         A
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            +    M   G   + I + ++I   CK+ ++ E+ + ++ M+  G+ P  +T  TL   
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490

Query: 587 YCKQGDSATAMIILE---SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           YC  G    AM +L    S+  K    T  TLI   C   R+G A + F ++     + D
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550

Query: 644 RVSLAALKNACYESNKYALFSDLSQRIAE 672
            ++   +    +++ + A   +L  RI E
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITE 579



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 205/475 (43%), Gaps = 18/475 (3%)

Query: 141 TSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGL------PLITSTLNRV 194
           TS++ NG           M   +   G+ KE    + ++ ++G+      P I +    +
Sbjct: 255 TSMVKNGVMPNCRTYTSIM-HGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLL 313

Query: 195 VGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA 254
            G A +  LV     + D M   G+  D   Y +++ AY + G+V EA    S M  +G 
Sbjct: 314 QGYATKGALVGM-HALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGL 372

Query: 255 ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK 314
             D  T   +I   C  G    ++ A    E+M+ +G  P    +  LI GLC     E+
Sbjct: 373 NPDAVTYGAVIGILCKSG---RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           A  L L+++       N   + ++I  +CKE ++  +E L + M   G+ P+  TY++LI
Sbjct: 430 AEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
            G+C  G  + A  L+  M   G  PN   Y  +I+G CK  R+ +A  L K+     + 
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
            D ITY I+L    +   T  A  L+ R+ ++G   ++  Y  ++   C+ K   ++ + 
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
           FQ      L     T+  MI   L+ G    A   F   +  G  P+  TY  +   +  
Sbjct: 609 FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 668

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAY---EYCKQGDSATAMIILESLDKK 606
           Q  L+E  Q + SM   G   C V    L +   E  ++G+   A   L  +D+K
Sbjct: 669 QGLLEELDQLFLSMEDNG---CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 720



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 209/487 (42%), Gaps = 51/487 (10%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F + G   + +S   EM +  +     T + ++   C+   ++ A EV   M   G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN-----ATLTLLITAFCDKGF 273
           V  +  +Y  ++  YC  G+  EA  +L  +   G   D      AT   L+  +  KG 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKG- 320

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
             ++     LL+ MVR G  P+ Y + +LI    K+G  ++A  +F K+ R     P+  
Sbjct: 321 --ALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM-RQQGLNPDAV 377

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG----------------- 376
           TY A+I   CK  ++  A +  E+M ++GL P    Y SLI+G                 
Sbjct: 378 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 437

Query: 377 ------------------HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
                             HCK G    +  L DLM + G  P+I  Y+ +IDG C  G++
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            EA +LL       L+ + +TY  L++ + K +    AL LF  M  +G++PDI  Y  +
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +    + ++   +++ +     +G      TY  ++ G  ++     A++ FQ +  +  
Sbjct: 558 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 617

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
             +  T+  +I  L K  +  EA   + +    G+ P   T   +A     QG       
Sbjct: 618 KLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG------- 670

Query: 599 ILESLDK 605
           +LE LD+
Sbjct: 671 LLEELDQ 677



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 182/400 (45%), Gaps = 21/400 (5%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTY 335
           + A  + +E++R+G   ++Y     +  + +        R + ++ R+   K  P VHTY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL--- 392
             +I   C+ ++++     L  + ++G      T+T L+ G C     +R  D MD+   
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCAD---KRTSDAMDIVLR 147

Query: 393 -MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL---LKKAFQRELQADKITYTILLSEHL 448
            M +  C P++++   ++ GLC + R QEA EL   +          D ++YT +++   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K+ ++ +A   +  M+   ++PD+  Y+++IAA C+ + M ++ +     +  G+ P   
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI-----TYGALISGLCKQSKLDEACQ 563
           TYTS++ GY   G    A+ + +++   G  PD +     TY  L+ G   +  L     
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
             + M+  GI P       L   Y KQG    AM++   + ++       T   +I  LC
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
              RV  A L+F +++ +  +   +   +L +     NK+
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 120/306 (39%), Gaps = 39/306 (12%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +++EM + G+ L T   N ++   C+ G V  +E++FD M   GV  D  +Y  ++  YC
Sbjct: 433 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 492

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             G++ EA + LS M+  G   +  T   LI  +C     G    A  L +EM   G  P
Sbjct: 493 LAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG---DALVLFKEMESSGVSP 549

Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
           ++ T+ +++ GL                                   CK   T+ A R+F
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609

Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
             L   D  K    T+  MI    K  +   A+ L       GL+PN  TY  +      
Sbjct: 610 QNLCLMD-LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 668

Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
            G  E    L   M   GCT +    N I+  L ++G +  A   L    ++    +  T
Sbjct: 669 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 728

Query: 440 YTILLS 445
            ++ + 
Sbjct: 729 ASLFID 734


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 236/537 (43%), Gaps = 49/537 (9%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M   G  L   + N ++ +  + GL   A E++  M   G+     ++  ++VA  +  
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
                   L  M   G   +  T T+ I      G  G I +A  +++ M   G  P+V 
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVL---GRAGRIDEACRIMKRMEDDGCGPDVV 300

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T+TVLID LC  G  + A  LF+K+ ++ ++KP+  TY  M+  +     + R +     
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKM-KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE 359

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+  G  P+  T+T L+   CK GN + A+ L+D+M K+G  PN++ YN +I GL +  R
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           + +A +L        +     TY + +  + K   + +AL  F +M   G+ P+I A   
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            + +     +++E++  F    + GL P   TY  M+  Y + G +  A++    M++  
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539

Query: 538 CAPDNI-----------------------------------TYGALISGLCKQSKLDEAC 562
           C PD I                                   TY  LI+GL K+ ++  A 
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL---ESLDKKLWIRTVNTLIRKL 619
           + + SM G G  P  +T  T+    CK  +   A+ +L    +++    + T NT+I  L
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659

Query: 620 CSEKRVGMAALFFHKLLGKDQNVDRVSLAAL-----KNACYESNKYALFSDLSQRIA 671
             EKRV  A   FH+ + K    D V+L  L     KN   E + + +  D   R+ 
Sbjct: 660 VIEKRVSDAIWLFHQ-MKKMLTPDCVTLCTLLPGVVKNGLME-DAFKIAEDFVHRLG 714



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 170/361 (47%), Gaps = 5/361 (1%)

Query: 189  STLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEADRWLS 247
            S L  ++ + C+      A+ VF       GV     SY  ++  +  +     A    +
Sbjct: 755  SVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 248  AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
             M + G   D  T  LL+ A    G  G I + FEL E+M+    KPN  TH ++I  L 
Sbjct: 815  EMKNAGCAPDVFTYNLLLDA---HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLV 871

Query: 308  KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            K    +KA  LF  LV  D + P   TY  ++ G  K  ++  A+ L E M + G  PN 
Sbjct: 872  KSNSLDKALDLFYDLVSGD-FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930

Query: 368  NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              Y  LI G  K G+   A +L   M +EG  P++ +Y +++  LC+ GRV +A    +K
Sbjct: 931  AIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990

Query: 428  AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              Q  L  D I Y +++    +    ++AL L+  M   G+NPD+  Y +LI        
Sbjct: 991  LKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050

Query: 488  MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            ++++ K ++E    GL P   TY ++I GY   GN  SA   ++RM   GC+P+  T+  
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110

Query: 548  L 548
            L
Sbjct: 1111 L 1111



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 177/401 (44%), Gaps = 39/401 (9%)

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            RG ++Q      +M   G+  N Y++  LI  L + G   +A  ++ ++V  +  KP++
Sbjct: 171 IRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVL-EGLKPSL 229

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            T++A++    K       + LLE M+  GL PN  TYT  I    + G  + A  +M  
Sbjct: 230 KTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKR 289

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL--------------------------- 425
           M  +GC P++  Y  +ID LC  G++ +A EL                            
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349

Query: 426 ---KKAFQRELQADK-----ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
               K F  E++AD      IT+TIL++   K     +A  L   M K G+ P++H Y T
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           LI+   R  ++ ++   F    T G+ PT  TY   I  Y + G    A++ F++M   G
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            AP+ +   A +  L +  +L EA   +  +   G++P  VT   +   Y K G    A+
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAI 529

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +L  + +      I  +N+LI  L    RV  A   F +L
Sbjct: 530 ELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 198/455 (43%), Gaps = 40/455 (8%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V+  ++++  + GR+ E + M   + +  L     T N ++    + G V+ A E+F  M
Sbjct: 546 VINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASM 605

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   +  ++  ++   C+   V  A + L  M     + D  T   +I         
Sbjct: 606 TGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLV---IE 662

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
             +  A  L  +M +K   P+  T   L+ G+ K G  E AF++    V       +   
Sbjct: 663 KRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRF 721

Query: 335 YTAMISG-----------------------------------YCKEEKMNRAEMLLERM- 358
           +  ++ G                                    CK ++   A+ +  R  
Sbjct: 722 WEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFT 781

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
           KE G+ P   +Y  LI G   V N E A++L   M   GC P+++ YN ++D   K G++
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            E +EL ++      + + IT+ I+++  +K     +AL LF  +V    +P    Y  L
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +    +  +++E+++ F+E +  G  P    Y  +I G+ + G++++A + F+RM + G 
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            PD  +Y +L+  LC+  ++D+A  ++E +   G+
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 190/453 (41%), Gaps = 40/453 (8%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            +++   + G+++    +   MT NG P  T T N ++   C+   V+ A ++  +M    
Sbjct: 585  LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
               D  ++  ++       RV++A  WL   + +    D  TL  L+      G    ++
Sbjct: 645  CMPDVLTFNTIIHGLVIEKRVSDA-IWLFHQMKKMLTPDCVTLCTLLPGVVKNGL---ME 700

Query: 279  QAFELLEEMV--------RKGWKP---NVYTH-----TVLI-----------DG------ 305
             AF++ E+ V        R+ W+     + T      T+L            DG      
Sbjct: 701  DAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPI 760

Query: 306  ---LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
               LCK      A  +F++  +    KP + +Y  +I G+        A  L   MK  G
Sbjct: 761  IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820

Query: 363  LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
              P+  TY  L+  H K G     ++L + M    C PN   +N II  L K   + +A 
Sbjct: 821  CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 423  ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            +L       +      TY  LL   LK    ++A  LF  MV  G  P+   Y  LI  F
Sbjct: 881  DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940

Query: 483  CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
             +   +  + + F+  +  G+ P  ++YTS++      G +  A+ YF+++ Q G   D+
Sbjct: 941  GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000

Query: 543  ITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
            I Y  +I GL +  +++EA   Y+ M  +GI+P
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 3/310 (0%)

Query: 268  FCDKGFRG--SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
            F  +GF G  + + A+ L  EM   G  P+V+T+ +L+D   K G   + F L+ +++ S
Sbjct: 795  FLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICS 854

Query: 326  DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
             + KPN  T+  +I+   K   +++A  L   +      P   TY  L+ G  K G  E 
Sbjct: 855  -SCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913

Query: 386  AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
            A +L + M   GC PN   YN +I+G  K G V  A EL K+  +  ++ D  +YT L+ 
Sbjct: 914  AKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVG 973

Query: 446  EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
               +      AL  F ++ + GL  D  AY  +I    R  +++E+   + E  + G+ P
Sbjct: 974  CLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033

Query: 506  TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
               TY S+I      G +  A K ++ +  IG  P+  TY ALI G       D A   Y
Sbjct: 1034 DLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVY 1093

Query: 566  ESMIGKGISP 575
            + M+  G SP
Sbjct: 1094 KRMMVGGCSP 1103



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 1/306 (0%)

Query: 291  GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
            G KP + ++  LI+G       E A+ LF ++ ++    P+V TY  ++  + K  K+N 
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEM-KNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 351  AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
               L E+M      PNT T+  +I    K  + ++A DL   +     +P    Y  ++D
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 411  GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            GL K GR++EA EL ++      + +   Y IL++   K  +   A  LF RMV+ G+ P
Sbjct: 904  GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 471  DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
            D+ +YT+L+   C   ++ ++  +F++    GL+     Y  MI G  R   I  A+  +
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 531  QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
              M   G  PD  TY +LI  L     +++A + YE +   G+ P   T   L   Y   
Sbjct: 1024 DEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMS 1083

Query: 591  GDSATA 596
            G+S +A
Sbjct: 1084 GNSDSA 1089



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 4/269 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++ +  + G++ E F +  +M  +     T T N ++    +   ++ A ++F ++ +  
Sbjct: 831  LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                  +Y  ++    + GR+ EA      M+D G   +NA   +LI  F   G  G + 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF---GKTGDVN 947

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             A EL + MVR+G +P++ ++T L+  LC+ G  + A   F KL ++  Y  ++  Y  M
Sbjct: 948  TACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI-AYNLM 1006

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I G  +  ++  A  L + M+ +G+ P+  TY SLI      G  E+A  L + +   G 
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGL 1066

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
             PN++ YNA+I G    G    AY + K+
Sbjct: 1067 EPNVFTYNALIRGYSMSGNSDSAYAVYKR 1095



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 49/306 (16%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G +   F L++  +    K ++ T+ ++  GL  +G   +    F K+ R   +  N ++
Sbjct: 141 GDMVVVFNLMQNQI---IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKM-REAGFHLNAYS 196

Query: 335 YTAMI-----SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           Y  +I     SG C+E     A  +  RM  +GL P+  T+++L+    K  + E    L
Sbjct: 197 YNGLIHLLLQSGLCRE-----ALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSL 251

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M   G  PNIY Y   I  L + GR+ EA  ++K                       
Sbjct: 252 LEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMK----------------------- 288

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                       RM   G  PD+  YT LI A C   K+ ++ + F +   +   P + T
Sbjct: 289 ------------RMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVT 336

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           Y +M+  +   G++    +++  M   G APD IT+  L++ LCK   +DEA    + M 
Sbjct: 337 YITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR 396

Query: 570 GKGISP 575
            +G+ P
Sbjct: 397 KQGVLP 402



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 9/262 (3%)

Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
           H +VG+    ++LM     +    ++  Y  I  GL  +G +++      K  +     +
Sbjct: 137 HRRVGDMVVVFNLMQ---NQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLN 193

Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
             +Y  L+   L+    ++AL ++ RMV  GL P +  ++ L+ A  +++  +  +   +
Sbjct: 194 AYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLE 253

Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
           E  + GL P   TYT  I    R G I  A +  +RM   GC PD +TY  LI  LC   
Sbjct: 254 EMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAG 313

Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
           KLD+A + +  M      P  VT +T+  ++   GD          ++   +   + T  
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373

Query: 614 TLIRKLCSEKRVGMAALFFHKL 635
            L+  LC    +  A   FH L
Sbjct: 374 ILVNALCKAGNIDEA---FHLL 392



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 3/281 (1%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M+ Q +  + NTY  +  G    G   +       M + G   N Y+YN +I  L + G 
Sbjct: 150 MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
            +EA E+ ++     L+    T++ L+    K+ +T+    L   M   GL P+I+ YT 
Sbjct: 210 CREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTI 269

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
            I    R  ++ E+ +  +     G  P   TYT +I      G +  A++ F +M    
Sbjct: 270 CIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             PD +TY  ++        L    +F+  M   G +P  +T   L    CK G+   A 
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 598 IILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +L+ + K+     + T NTLI  L    R+  A   F+ +
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM 430



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 4/230 (1%)

Query: 144  ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
            + +G+F         ++    + GRL+E   +  EM + G     +  N ++    + G 
Sbjct: 886  LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945

Query: 204  VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
            V  A E+F  M   G+  D  SY  +V   C  GRV +A  +   +   G  LD+    L
Sbjct: 946  VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005

Query: 264  LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
            +I      G    I++A  L +EM  +G  P+++T+  LI  L   G  E+A +L+ +L 
Sbjct: 1006 MIDGL---GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL- 1061

Query: 324  RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
            +    +PNV TY A+I GY      + A  + +RM   G  PNT T+  L
Sbjct: 1062 QFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 23/261 (8%)

Query: 93   DSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERA 152
            +++TH     ++A+L        AL  FY  +    F      Y      L+ +G  E A
Sbjct: 859  NTITHN---IIIANLVKSNSLDKALDLFYDLVS-GDFSPTPCTYGPLLDGLLKSGRLEEA 914

Query: 153  HEVMQCMV---------------SSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGI 197
             E+ + MV               + F + G +     +   M   G+     +   +VG 
Sbjct: 915  KELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGC 974

Query: 198  ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
             CE G V+ A   F+++   G+  D+ +Y LM+    R  R+ EA      M  RG   D
Sbjct: 975  LCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPD 1034

Query: 258  NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
              T   LI      G  G ++QA +L EE+   G +PNV+T+  LI G    G ++ A+ 
Sbjct: 1035 LFTYNSLILNL---GVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYA 1091

Query: 318  LFLKLVRSDNYKPNVHTYTAM 338
            ++ +++      PN  T+  +
Sbjct: 1092 VYKRMMVG-GCSPNTGTFAQL 1111


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 6/416 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC-ELGLVEYAEEVFDEMCARGVCADASS 225
           GR ++   +  +M +    L  +     V  +C   GL++ A  +  +    G C +  +
Sbjct: 122 GRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYA 181

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELL 284
           Y  ++ +    GR  +A     + +  G    D  +  ++I   C  G   + ++A EL+
Sbjct: 182 YNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMG---NFQKALELV 238

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E M   G  P+  TH +L+DGLC+     K   +  +L R     PN  TYT++ISGYCK
Sbjct: 239 ERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCK 298

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             KM  A  +   M E G  PNT TY  LI G+ K  + E A  +   +    C P++  
Sbjct: 299 AGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVT 358

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM- 463
           ++++IDG C+ G++ +A  + K+     +Q +  T++I++    KQ  + +AL +   + 
Sbjct: 359 FSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELN 418

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++  + P    Y  +I   C+  K+ E+     +    G  P K TYT +I G+   G I
Sbjct: 419 MRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRI 478

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
             A+  F +M + GC PDNIT  + +S + K    +E  Q      G G++  +V+
Sbjct: 479 PEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLASQKVS 534



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 180/381 (47%), Gaps = 4/381 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++   CR GR  +A +    M+D+   L  A     +   C     G +  A  LL
Sbjct: 110 SYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNA--GLLDAASTLL 167

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +  R G     Y +  L++ L   G  + A  LF   ++   Y P+V ++  +I G C+
Sbjct: 168 TKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCR 227

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIY 403
                +A  L+ERM E G  P+T T+  L+ G C+     + ++++  + ++G C PN  
Sbjct: 228 MGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAV 287

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y ++I G CK G++++A  +     +   + + +TY +L++ + K  + + A+ ++ ++
Sbjct: 288 TYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQL 347

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +     PD+  +++LI  +CR  ++ ++++ ++E     + P   T++ +I    +    
Sbjct: 348 ILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRS 407

Query: 524 SSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + A+   + +N +   AP    Y  +I  LCK  K+DEA      M  KG  P + T   
Sbjct: 408 AEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTI 467

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L   +C +G    A+ +   +
Sbjct: 468 LIIGHCMKGRIPEAITLFHKM 488



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 28/420 (6%)

Query: 97  HEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVM 156
           H  A+ +   + +++G +    FF +  G       +      A++L++ G+       +
Sbjct: 124 HRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLD----AASTLLTKGS------RL 173

Query: 157 QCMVSSFA---------EIGRLKEGFSMVIEMTNNGL--PLITSTLNRVVGIACELGLVE 205
            C +  +A           GR ++  ++      +GL  P + S  N V+   C +G  +
Sbjct: 174 GCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWS-FNVVIKGVCRMGNFQ 232

Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLL 264
            A E+ + M   G   D  ++ ++V   CR  +V +    L  +   G  + NA T T +
Sbjct: 233 KALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSV 292

Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
           I+ +C     G ++ A  +  +M+  G +PN  T+ VLI+G  K    E A R++ +L+ 
Sbjct: 293 ISGYCKA---GKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLIL 349

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
             +  P+V T++++I GYC+  +++ A+ + + M    + PN  T++ +I+  CK     
Sbjct: 350 R-HCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSA 408

Query: 385 RAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
            A D++ +L  +    P  + YN +ID LCK G+V EA  ++    ++    DK TYTIL
Sbjct: 409 EALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTIL 468

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +  H  +    +A+ LF +MV+AG  PD     + ++   +     E ++    A   GL
Sbjct: 469 IIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGL 528


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 169/291 (58%), Gaps = 4/291 (1%)

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +L+  FC +G    I+ A  +   + + G +P+V +   L++G  + G  ++ FRL  
Sbjct: 128 FNILMHRFCKEG---DIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-K 183

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
             + +   +P+V+TY+ +I+G CKE KM+ A  L + M ++GL+PN  T+T+LI GHCK 
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS 243

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M  +  +P++  YN +I GLCKKG +++A++L+ +   + L+ DKITY
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 303

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T L+    K+ + + A     RM++  +  D  AYT LI+  C++ +  ++EK  +E ++
Sbjct: 304 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 363

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           AGL P   TYT +I  + + G++ +  K  + M + G  P  +TY  L++G
Sbjct: 364 AGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 205/405 (50%), Gaps = 13/405 (3%)

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKG 272
           +C   + ++A S  L+ V   R G+ + +  + + +  +G    D    + LITA+ + G
Sbjct: 12  LCTHQMLSEAKS--LIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESG 69

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL---FLKLVRSDNYK 329
           F     + + L  E   K W P      VL     +     K F+L   F + +    Y 
Sbjct: 70  FLRDAIECYRLTRE--HKFWVPFDTCRKVL-----EHMMKLKYFKLVWGFYEEILECGYP 122

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
            +++ +  ++  +CKE  +  A+ +   + + GL P+  ++ +L+ G+ ++G+ +  + L
Sbjct: 123 ASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 182

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M   G  P++Y Y+ +I+GLCK+ ++ +A EL  +   + L  + +T+T L+  H K
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 242

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
                 A+ ++ +M+   L+PD+  Y TLI   C++  +K++     E    GL P K T
Sbjct: 243 SGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
           YT++I G  ++G++ +A ++ +RM Q     D++ Y ALISGLC++ +  +A +    M+
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 362

Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT 614
             G+ P   T   +  E+CK+GD  T   +L+ + +   + +V T
Sbjct: 363 SAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 407



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 4/302 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           E+   G P      N ++   C+ G +  A+ VF+ +   G+     S+  ++  Y R+G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 174

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
            + E  R  SAM   G   D  T ++LI   C +     +  A EL +EM+ KG  PN  
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKE---SKMDDANELFDEMLDKGLVPNGV 231

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           T T LIDG CK G  + A  ++ +++ S +  P++ TY  +I G CK+  + +A  L++ 
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQML-SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 290

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           M  +GL P+  TYT+LI G CK G+ E A++    M +E    +  AY A+I GLC++GR
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 350

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
             +A ++L++     L+ D  TYT++++E  K+ +      L   M + G  P +  Y  
Sbjct: 351 YLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 410

Query: 478 LI 479
           L+
Sbjct: 411 LM 412



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 137/253 (54%), Gaps = 4/253 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ +  +G L EGF +   M  +G+     T + ++   C+   ++ A E+FDEM  +G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 225

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  ++  ++  +C+ GRV  A      ML +    D  T   LI   C K   G +K
Sbjct: 226 LVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK---GDLK 282

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QA +L++EM  KG KP+  T+T LIDG CK+G  E AF    ++++ +N + +   YTA+
Sbjct: 283 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQ-ENIRLDDVAYTAL 341

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           ISG C+E +   AE +L  M   GL P+T TYT +I   CK G+      L+  M ++G 
Sbjct: 342 ISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 401

Query: 399 TPNIYAYNAIIDG 411
            P++  YN +++G
Sbjct: 402 VPSVVTYNVLMNG 414



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 8/280 (2%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +IY ++ +I    + G +++A E  +   + +      T   +L   +K    K   G +
Sbjct: 54  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFY 113

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             +++ G    ++ +  L+  FC++  ++ ++  F      GL P+  ++ +++ GY+R 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++    +    M+  G  PD  TY  LI+GLCK+SK+D+A + ++ M+ KG+ P  VT 
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233

Query: 581 VTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            TL   +CK G    AM     ++ +SL   L   T NTLI  LC +  +  A     ++
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLI--TYNTLIYGLCKKGDLKQAHDLIDEM 291

Query: 636 LGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
             K    D+++   L +  C E +    F    + I E I
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENI 331


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 221/476 (46%), Gaps = 11/476 (2%)

Query: 162 SFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
           +   +GR  E  +M+  M  +G    T     V+   C  G V  A  + DEM   G  A
Sbjct: 181 ALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSA 240

Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAF 281
           D +++  +V   C +GR+ EA R +  M+ RG + +  T   L+   C       +    
Sbjct: 241 DVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLC-------LASQV 293

Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           E    M+ +  + NV     +I      G  ++A  L+ + + S    P+ HTY+ +I G
Sbjct: 294 EEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELY-ETMGSKGCPPDAHTYSILIHG 352

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CK  ++  A  LL  M+++G  P+  TYT L++  C+ G ++    ++++M  +G + N
Sbjct: 353 LCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMN 412

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
           +  YN +I  +CK  R+ +A   +++   +  + D  TY  ++       + ++A  LF 
Sbjct: 413 LEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFE 472

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            ++  G+  +   Y TLI A  R    +++     + +  G      +Y  +I    RDG
Sbjct: 473 NLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDG 532

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           N+  ++     M + G  P+N++Y  LIS LCK  ++ +A +  + M+ + ++P  VT  
Sbjct: 533 NVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYN 592

Query: 582 TLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
           TL    CK G    A+ +LE L   D    I T N LI   C  + +  A++  ++
Sbjct: 593 TLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNR 648



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 15/469 (3%)

Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
           Q ++ +    G + E  +++ EM   G     +T N +V   C LG +  A  + D M  
Sbjct: 211 QTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMI 270

Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
           RG   +A +Y  ++   C   +V EA   L  + +   +L N  +   +         G 
Sbjct: 271 RGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCL-------LDGK 323

Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
           +K+A EL E M  KG  P+ +T+++LI GLCK G    A +L L+ +    + P++ TYT
Sbjct: 324 LKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKL-LREMEDKGFAPSIVTYT 382

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
            ++  +C+    +    +LE M ++GL  N   Y  +I   CK    + A   M  M  +
Sbjct: 383 ILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQ 442

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P+I  YN II  LC   +++EA  L +      + A+ ITY  L+   L+    + A
Sbjct: 443 GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDA 502

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
           + L   MV  G + DI +Y  LI A CR   +  S     E    G+ P   +Y  +I  
Sbjct: 503 ISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISE 562

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
             +   +  A++  + M      PD +TY  LI+GLCK   +  A    E +  + +   
Sbjct: 563 LCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHAD 622

Query: 577 EVTRVTLAYEYCKQGDSATAMIILE-------SLDKKLWIRTVNTLIRK 618
            +T   L   +CK      A ++L        + +++ W   V   +RK
Sbjct: 623 IITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 202/466 (43%), Gaps = 11/466 (2%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           +P  T T +      C LG  + A  +   M   G   D   Y+ ++ A C  G V EA 
Sbjct: 168 VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAA 227

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L  M   G   D  T   ++   C     G +++A  L++ M+ +G  PN  T+  L+
Sbjct: 228 TLLDEMFLMGCSADVNTFNDIVHGLCTL---GRLREAARLVDRMMIRGCVPNAITYGFLL 284

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLC     E+A  +  ++      + NV  +  +I     + K+  A  L E M  +G 
Sbjct: 285 KGLCLASQVEEARTMLGRVP-----ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGC 339

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+ +TY+ LI+G CK+G    A  L+  M  +G  P+I  Y  ++   C+ G       
Sbjct: 340 PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +L+    + L  +   Y  ++    K      A+     M   G  PDI  Y T+I   C
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
              +M+E+E  F+  +  G+     TY ++I   LR+G+   A+     M   GC+ D +
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM-IILES 602
           +Y  LI  LC+   +D +      M  KGI P  V+   L  E CK      A+ +  E 
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579

Query: 603 LDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
           L+++L   I T NTLI  LC    +  A     KL  +D + D ++
Sbjct: 580 LNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIIT 625



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 12/369 (3%)

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N V+G     G ++ A E+++ M ++G   DA +Y +++   C++GR+  A + L  M D
Sbjct: 312 NTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMED 371

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           +G      T T+L+ +FC  G   +I+    +LE M  KG   N+  +  +I  +CK   
Sbjct: 372 KGFAPSIVTYTILLHSFCRNGMWDNIRA---MLEVMSDKGLSMNLEGYNGMICAVCKDRR 428

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A R F++ ++S  YKP++ TY  +I   C   +M  AE L E +  +G++ N  TY 
Sbjct: 429 MDDAMR-FMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYN 487

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
           +LI+   + G+++ A  L + M   GC+ +I +YN +I  LC+ G V  +  LL +  ++
Sbjct: 488 TLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEK 547

Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            ++ + ++Y +L+SE  K    + AL L   M+   L PDI  Y TLI   C+   M  +
Sbjct: 548 GIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAA 607

Query: 492 ----EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
               EK   E + A +     TY  +I  + +   +  A     R    G  P+  T+G 
Sbjct: 608 LNLLEKLHNEDVHADII----TYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGI 663

Query: 548 LISGLCKQS 556
           ++    ++S
Sbjct: 664 MVQNFVRKS 672



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 201/434 (46%), Gaps = 15/434 (3%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           ++ +   A CR+GR  EA   L +M   G + D      +I A C +G    + +A  LL
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQG---GVNEAATLL 230

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM   G   +V T   ++ GLC  G   +A RL  +++      PN  TY  ++ G C 
Sbjct: 231 DEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIR-GCVPNAITYGFLLKGLCL 289

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV-GNFERAYDLMDLMGKEGCTPNIY 403
             ++  A  +L R+ E     N   + ++I G C + G  + A +L + MG +GC P+ +
Sbjct: 290 ASQVEEARTMLGRVPEL----NVVLFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAH 344

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y+ +I GLCK GR+  A +LL++   +      +TYTILL    +         +   M
Sbjct: 345 TYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVM 404

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
              GL+ ++  Y  +I A C+ ++M ++ +F QE  + G  P   TY ++I     +  +
Sbjct: 405 SDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQM 464

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
             A   F+ +   G   + ITY  LI  L +     +A      M+  G S   V+   L
Sbjct: 465 EEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGL 524

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
               C+ G+   ++++L  + +K  I+    + N LI +LC  +RV  A     ++L ++
Sbjct: 525 IKALCRDGNVDRSIMLLSEMAEK-GIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQE 583

Query: 640 QNVDRVSLAALKNA 653
              D V+   L N 
Sbjct: 584 LTPDIVTYNTLING 597



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 177/438 (40%), Gaps = 70/438 (15%)

Query: 279 QAFELLEEMV-RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A  LL+++  R    P+  ++  ++    +         L+ ++V  D   P   T++ 
Sbjct: 118 RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSI 177

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
                C+  + + A  +L  M   G +P+T  Y ++I+  C  G    A  L+D M   G
Sbjct: 178 AARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL-----LSEHLKQAE 452
           C+ ++  +N I+ GLC  GR++EA  L+ +   R    + ITY  L     L+  +++A 
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 453 T--------------------------KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
           T                          K+A  L+  M   G  PD H Y+ LI   C+  
Sbjct: 298 TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLG 357

Query: 487 KMKESEKFFQEAITAGLFPTKETYT----------------------------------- 511
           ++  + K  +E    G  P+  TYT                                   
Sbjct: 358 RLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYN 417

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            MIC   +D  +  A+++ Q M   G  PD  TY  +I  LC  ++++EA   +E+++ +
Sbjct: 418 GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE 477

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMA 628
           G+    +T  TL +   + G    A+ +   +      L I + N LI+ LC +  V  +
Sbjct: 478 GVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRS 537

Query: 629 ALFFHKLLGKDQNVDRVS 646
            +   ++  K    + VS
Sbjct: 538 IMLLSEMAEKGIKPNNVS 555


>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 573

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 225/454 (49%), Gaps = 21/454 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S  ++G L++ +  V +M ++G+ +    +  ++    +LG+V      F +    G
Sbjct: 92  LIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLG 151

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D   Y + + AYC++G + EA + L+ M+    + D    T LI  +C    +G  +
Sbjct: 152 VHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYC---LKGETE 208

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A+++ EEM++   KP+V T+ +L  G  + G   K F + L+ +     +PN  TY   
Sbjct: 209 NAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDI-LEHMMDQGLEPNSLTYGIA 267

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+G+C+   ++ AE+L   ++E+G+      Y S++ G+   G  + AY L   + K+G 
Sbjct: 268 IAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGN 327

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             +  + + +I+GLC+  +V EA  + K   ++ +  D I+Y+ L+S + +  +   A  
Sbjct: 328 MVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARL 387

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  MV+ GL+ D+  YT L+  +C+  +++E+ + F + I  G+ P    YT ++ G+L
Sbjct: 388 WFHDMVERGLS-DVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHL 446

Query: 519 RD-------GNISSAVKYFQR---------MNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           ++       G       +F R         M  +   PD   Y  LI G CK   L+EA 
Sbjct: 447 KETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEAR 506

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
             ++ M+ KG+ P   T   L   YC QG+ A A
Sbjct: 507 GLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKA 540



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 21/405 (5%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           + ++ ++G + E   ++ EM    L         ++   C  G  E A +VF+EM    +
Sbjct: 163 MDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANI 222

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  +Y ++   Y R G V +    L  M+D+G   ++ T  + I  FC  G     + 
Sbjct: 223 KPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEV 282

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F ++EE   +G       +  ++ G    GWT+ A+ LFL++ +  N    + + + +I
Sbjct: 283 LFNIVEE---RGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRL-SCSKLI 338

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
           +G C++EK+  A  + + M E+ ++P+  +Y+ LI  +C+  +   A      M + G +
Sbjct: 339 NGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS 398

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK-------QAE 452
            ++  Y  +++G CK GR+QEA EL  +     ++ D + YT+LL  HLK       Q  
Sbjct: 399 -DVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGI 457

Query: 453 TKQALGLFCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
            K+    F R         M    + PD+  YT LI   C+ + ++E+   F E +  GL
Sbjct: 458 AKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGL 517

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            P   TYT++I GY   G I+ A   FQ M   G  PD +++  L
Sbjct: 518 IPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 180/395 (45%), Gaps = 12/395 (3%)

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF-----LKLVRSDNYKPNVHTYTAMISG 341
           M+  G K +V+  +  I GLC  G  + A+ +      L+ +  +        Y  +I G
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
            CKE K+  AE +LE     G  P+  +Y+ LI+ HCK+GN E+A+  ++ M   G   N
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 120

Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
            Y    ++  L K G V E     +K     +  D + Y I +  + K     +A+ L  
Sbjct: 121 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 180

Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
            M+   L PD   YT LI  +C + + + + + F+E + A + P   TY  +  GY R+G
Sbjct: 181 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 240

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
            +       + M   G  P+++TYG  I+G C+   L EA   +  +  +GI    V   
Sbjct: 241 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 300

Query: 582 TLAYEYCKQG--DSATAMIILESLDKKLWIR-TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           ++   Y   G  D A  + +  +    +  R + + LI  LC +++VG A+     +L K
Sbjct: 301 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 360

Query: 639 DQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           +   D +S + L +A  ++    N    F D+ +R
Sbjct: 361 NVVPDVISYSKLISAYCQTRDMHNARLWFHDMVER 395



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV  +   G     + + + +   G  +   + ++++   C    V  A  V   M  + 
Sbjct: 302 MVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKN 361

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  SY  ++ AYC+   +  A  W   M++RG + D    T+L+  +C  G    ++
Sbjct: 362 VVPDVISYSKLISAYCQTRDMHNARLWFHDMVERG-LSDVIVYTVLMNGYCKVG---RLQ 417

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK----KGWTEKA-----------FRLFLKLV 323
           +A EL  +M+  G KP+V  +TVL+DG  K    +GW   A            ++ L  +
Sbjct: 418 EACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSM 477

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
           +    +P+V  YT +I G CK E +  A  L + M  +GL+P+ +TYT+LI G+C  G  
Sbjct: 478 KDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEI 537

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAI 408
            +A DL   M  +G  P++ +++ +
Sbjct: 538 AKAEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 21/307 (6%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ F   G L E   +   +   G+  I      +V      G  ++A  +F  +  +G 
Sbjct: 268 IAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGN 327

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  S   ++   CR  +V EA      ML++  + D  + + LI+A+C       +  
Sbjct: 328 MVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTR---DMHN 384

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A     +MV +G   +V  +TVL++G CK G  ++A  LF++++     KP+V  YT ++
Sbjct: 385 ARLWFHDMVERGL-SDVIVYTVLMNGYCKVGRLQEACELFVQMINL-GIKPDVVAYTVLL 442

Query: 340 SGYCKEEKMN----------------RAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            G+ KE                    + ++LL  MK+  + P+   YT LI G CK    
Sbjct: 443 DGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYL 502

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           E A  L D M  +G  P+++ Y A+I+G C +G + +A +L ++   + ++ D +++++L
Sbjct: 503 EEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVL 562

Query: 444 LSEHLKQ 450
               L+ 
Sbjct: 563 HKRTLRH 569


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 223/464 (48%), Gaps = 20/464 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ S+ ++G L +       M ++GL      ++ ++    +LG+     E F +    G
Sbjct: 336 LIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSG 395

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y + + AYC++G + EA + L  M+  G   D    T LI  +C KG   + +
Sbjct: 396 LHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNAR 455

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           QAF   EEM++   KP+V T+ +L  GL K+G   + F L +  +     +PN  TY  +
Sbjct: 456 QAF---EEMLKANVKPDVVTYNILASGLSKRGLVMEVFDL-IGHMEDRGLQPNSLTYGVV 511

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+C+ + ++ AE+L   ++E+G+      Y+S++ G+   G  + AY L   + K+G 
Sbjct: 512 IDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGK 571

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             + ++ + +I  LC+ G  Q A  +     ++    D I+Y+ L+S + +  + + A  
Sbjct: 572 LVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARL 631

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            F  MV+ GL  D+  YT L+  +C+   M+E+ + F +  + G+ P    YT ++ G+L
Sbjct: 632 WFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHL 691

Query: 519 RDG------NIS----------SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           ++        IS             +    M ++   PD   Y  LI G CK   L++A 
Sbjct: 692 KEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQAR 751

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
             ++ M+ KG++P       L   YC QG+ A A  + + +  K
Sbjct: 752 GLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDK 795



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 198/458 (43%), Gaps = 56/458 (12%)

Query: 142 SLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACEL 201
           +++S+G     H +M  ++  F ++G   +      +  ++GL +     N  +   C+L
Sbjct: 355 AMVSHGLEANCH-IMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKL 413

Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
           G ++ A ++  EM   G+  D   Y  ++  YC  G +  A +    ML      D  T 
Sbjct: 414 GNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTY 473

Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK------------- 308
            +L +       RG + + F+L+  M  +G +PN  T+ V+IDG C+             
Sbjct: 474 NILASGLSK---RGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNI 530

Query: 309 ----------------------KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
                                 KGWT+ A+ LFL++ +      +  + + +IS  C++ 
Sbjct: 531 VEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKL-VDRFSCSKLISDLCRDG 589

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
               A  +   M E+  +P+  +Y+ LI  +C+ G+   A      M + G   ++  Y 
Sbjct: 590 NSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYT 649

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG-------- 458
            +++G CK G +QEA EL  +     ++ D I YT+LL  HLK+   ++  G        
Sbjct: 650 VLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSL 709

Query: 459 --------LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
                   L   M +  + PD+  YT LI   C+   ++++   F E +  GL P    Y
Sbjct: 710 LLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAY 769

Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
           T++I GY   G ++ A   FQ M   G  PD +T+  L
Sbjct: 770 TALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 185/398 (46%), Gaps = 8/398 (2%)

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +AF++  EM+  G KP+V+ H+  I GLC+ G  + A+ +  +++R +  +     +  +
Sbjct: 243 KAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIR-EKVQVEAIAFNVV 301

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G CKE ++   E LLE    QGL P+   Y+ LI  +CKVGN  +  D    M   G 
Sbjct: 302 MDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGL 361

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
             N +  + ++    K G   +  E  +K     L  D + Y I +  + K     +A+ 
Sbjct: 362 EANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVK 421

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           L   M+  GL+PD   YT LI  +C +  ++ + + F+E + A + P   TY  +  G  
Sbjct: 422 LLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLS 481

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +         M   G  P+++TYG +I G C+   L EA   +  +  KGI   EV
Sbjct: 482 KRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEV 541

Query: 579 TRVTLAYEYCKQG--DSATAMIILESLDKKLWIR-TVNTLIRKLCSEKRVGMAALFFHKL 635
              ++   Y  +G  D+A  + +  +   KL  R + + LI  LC +     A+     +
Sbjct: 542 LYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTM 601

Query: 636 LGKDQNVDRVSLAALKNACYES----NKYALFSDLSQR 669
           L K+   D +S + L +A  ++    N    F D+ QR
Sbjct: 602 LEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQR 639



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 219/532 (41%), Gaps = 23/532 (4%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           +    E G++   ++++ E+    + +     N V+   C+   +E  E++ +    +G+
Sbjct: 267 IIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGL 326

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D   Y  ++ +YC++G + +      AM+  G   +   ++ L+  F   G    + +
Sbjct: 327 TPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTE 386

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
            F+   +    G   +   + + +D  CK G  ++A +L  +++        +H YT +I
Sbjct: 387 YFQKFRD---SGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIH-YTCLI 442

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
            GYC +  +  A    E M +  + P+  TY  L  G  K G     +DL+  M   G  
Sbjct: 443 KGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQ 502

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           PN   Y  +IDG C+   + EA  L     ++ +   ++ Y+ ++  +L +  T  A  L
Sbjct: 503 PNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVL 562

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           F R+ K G   D  + + LI+  CR    + +       +     P   +Y+ +I  Y +
Sbjct: 563 FLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQ 622

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            G++ +A  +F  M Q G   D I Y  L++G CK   + EAC+ +  M   GI P  + 
Sbjct: 623 TGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIA 682

Query: 580 RVTLAYEYCK-------QGDSATAMIIL------------ESLDKKLWIRTVNTLIRKLC 620
              L   + K       QG S     +L            + ++ +  +     LI   C
Sbjct: 683 YTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQC 742

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
               +  A   F ++L K    D  +  AL N      + A   DL Q + +
Sbjct: 743 KSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVD 794



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 30/404 (7%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE---------KAFRLFLKLVRSDNY 328
           +    L  E+ R G  P V+T  +L+    +   +E         K FRL L        
Sbjct: 172 RDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTL-------- 223

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             + H+   +     +E+K ++A  +   M E G+ P+ + ++S I G C+ G  + AY 
Sbjct: 224 --DAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYA 281

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           ++  + +E       A+N ++DGLCK+ R++E  +LL+   ++ L  D   Y+ L+  + 
Sbjct: 282 ILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYC 341

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K     + L  +  MV  GL  + H  + L+  F +     +  ++FQ+   +GL     
Sbjct: 342 KVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGV 401

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y   +  Y + GN+  AVK    M  +G +PD I Y  LI G C +  +  A Q +E M
Sbjct: 402 LYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEM 461

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWIR--TVNTLIRKLCSEKRV 625
           +   + P  VT   LA    K+G       ++  + D+ L     T   +I   C    +
Sbjct: 462 LKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNL 521

Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC------YESNKYALF 663
             A + F+  + +++ +D + +      C      +  N Y LF
Sbjct: 522 SEAEVLFN--IVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLF 563


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 174/361 (48%), Gaps = 11/361 (3%)

Query: 214 MCARGVCA-----DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           M ARG  +     D ++   +V   C+ G V EA R    M   G   +  T T L+  +
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL-VRSDN 327
              G R   ++ F L EEM R G +PN+YT+  LI   C+ G  E+A  LF ++ VR   
Sbjct: 84  FTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRG-- 138

Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
              NV +Y  +I+G C+  K+  A  LL+ M+ +G  P+  T+  L+ G+ K G    A 
Sbjct: 139 IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
              + M   G  P+   YN +I G C+   +  A   L    +R L+  K+TYTIL+   
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
            ++    +A  +   M KAGL  D H Y  L+ A C +  MK++ K FQ     G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             Y  MI GY R+G+   A+K    M Q G  P++ +YG  I  LCK  K  EA    + 
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDD 378

Query: 568 M 568
           M
Sbjct: 379 M 379



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 5/354 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKP-NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
           G ++ A  +L    + G    +V   T L++G CK G   +A R+F ++       PN  
Sbjct: 16  GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL-GLAPNEV 74

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TYTA++ GY    +  +   L E M+  G+ PN  TY  LI   C+ G FERA  L D M
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
              G   N+ +YN +I GLC+ G++ +A +LL        +   IT+ +L+  + K  + 
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
             AL  F +M  AG  P    Y  LIA FCR + M  + +   +    GL PTK TYT +
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           I  + R+ ++  A +    M + G   D  TYG L+  LC +  + +A + ++SM  KG+
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314

Query: 574 SPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTVN--TLIRKLCSEKR 624
            P  V    + Y Y ++G S  A+ +I+E   K L   + +    IR LC + +
Sbjct: 315 EPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 39/334 (11%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G+ ++GF++  EM   G+     T N ++G  C  G  E A  +FDEM  RG+  +  SY
Sbjct: 87  GQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   CR G++     W                                  A +LL+ 
Sbjct: 147 NTLIAGLCRHGKL-----W---------------------------------DAAKLLDM 168

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G +P++ T  +L+DG  K G    A   F ++ ++  ++P+  TY  +I+G+C+  
Sbjct: 169 MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM-KAAGFQPSAVTYNMLIAGFCRAR 227

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            M RA   L  MKE+GL P   TYT LI    +  +  +A++++  M K G   + + Y 
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYG 287

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++  LC +G +++A +L +   ++ ++   + Y +++  + ++  + +AL L   M + 
Sbjct: 288 VLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           GL P+  +Y   I   C+  K +E+E    +  T
Sbjct: 348 GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMET 381



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 7/372 (1%)

Query: 167 GRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
           G ++   +M+   T +G   L  +    +V   C+ G V  A  VFDEM   G+  +  +
Sbjct: 16  GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVT 75

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELL 284
           Y  ++  Y   G+  E    L   + RG +  N  T   LI  +C  G     ++A  L 
Sbjct: 76  YTALMHGYFTHGQ-REKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTG---EFERARSLF 131

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           +EM  +G   NV ++  LI GLC+ G    A +L L ++R++  +P++ T+  ++ GY K
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL-LDMMRTEGTRPSIITFNLLVDGYGK 190

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             KM+ A     +MK  G  P+  TY  LI G C+  +  RA   +  M + G  P    
Sbjct: 191 AGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVT 250

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
           Y  +ID   ++  + +A+E+L    +  L+ D  TY +L+     +   K A  LF  M 
Sbjct: 251 YTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMG 310

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G+ P    Y  +I  + R+    ++ K   E    GL P   +Y   I    +D    
Sbjct: 311 EKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQ 370

Query: 525 SAVKYFQRMNQI 536
            A      M  I
Sbjct: 371 EAEALLDDMETI 382



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 19/262 (7%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
           G FERA  +   M               ++     G+L +   ++  M   G      T 
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N +V    + G +  A   F++M A G    A +Y +++  +CR   +T A+R LS M +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           RG      T T+LI +F  +   G   +AFE+L  M + G + + +T+ VL+  LC +G 
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMG---KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            + A +LF  +      +P+   Y  MI GY +E    +A  L+  M+++GL+PN+ +Y 
Sbjct: 299 MKDARKLFQSMGEK-GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYG 357

Query: 372 SLIYGHCKVGNFERAYDLMDLM 393
             I   CK    + A  L+D M
Sbjct: 358 LTIRVLCKDDKCQEAEALLDDM 379



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E+   M   G+  DA +Y ++V A C  G + +A +   +M ++G    N    ++I  +
Sbjct: 269 EILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGY 328

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--LKLVRS 325
              G  GS  +A +L+ EM +KG  PN  ++ + I  LCK    ++A  L   ++ +RS
Sbjct: 329 ---GREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRS 384


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 212/488 (43%), Gaps = 40/488 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++ F   G++ + +++ ++M + G+P    T N V+   C+  +V+ A+ VF +M  +G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
           V     +Y  ++  Y   G+  E  R L  M       D     LL+   C  G      
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 273 ------FRGSIK------QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
                  R  IK      +A  + ++M ++G  PNV  +  LID LCK G  + A   F 
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFN 489

Query: 321 KLVR----------------------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM 358
           +++                           + +V  +  ++   C+E ++  A+ L+E M
Sbjct: 490 QMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549

Query: 359 KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
              G+ P+  +Y +L+ GHC  G  + A  L+D+M   G  PN + YN ++ G CK  R+
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRI 609

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
            +AY LL++        D +TY  +L    +     +A  L+  M+ +    D++ Y  +
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           +   C+   + E+ K FQ   + GL     T+  MI   L+ G    A+  F  ++  G 
Sbjct: 670 LNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGL 729

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
            PD  TY  +   L K+  L+E    + +M   G +P       L   +  +GD + A  
Sbjct: 730 VPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGA 789

Query: 599 ILESLDKK 606
            L  LD+K
Sbjct: 790 YLSKLDEK 797



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 217/482 (45%), Gaps = 44/482 (9%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNN-GL--PLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
           +V  F    R +E   ++  M ++ GL  P    + N V+      G V+ A  +F +M 
Sbjct: 272 LVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI 331

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
            RG+  D  +Y  ++   C+   V  A      MLD+G    N T   LI  +      G
Sbjct: 332 DRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLST---G 388

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
             K+   LLEEM     +P+ + + +L+D LCK G   +A  +F  ++R    KP+    
Sbjct: 389 KWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRK-GIKPD---- 443

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI--------------------- 374
            AMI         + A  + ++M++QGL PN   Y +LI                     
Sbjct: 444 -AMI---------DEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMIN 493

Query: 375 --YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
             YG C V  +E+A +L+  M  +G   ++  +N ++  LC++GRV EA  L++   +  
Sbjct: 494 EVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVG 553

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           ++ D I+Y  L+  H     T +A  L   MV  GL P+   Y TL+  +C+ +++ ++ 
Sbjct: 554 VRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAY 613

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
              +E +  G  P   TY +++ G  + G  S A + +  M       D  TY  +++GL
Sbjct: 614 SLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGL 673

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV 612
           CK + +DEA + ++S+  KG+    +T   +     K G    AM +  ++     +  V
Sbjct: 674 CKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDV 733

Query: 613 NT 614
            T
Sbjct: 734 ET 735



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 198/442 (44%), Gaps = 77/442 (17%)

Query: 210 VFDEM---CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
           +FD M   C+  V  D  +Y +++  +CRMGR+         +L  G  +++     L+ 
Sbjct: 179 LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLK 238

Query: 267 AFCD-------------------------------KGF--RGSIKQAFELLEEMVRK--- 290
             CD                               KGF      ++A ELL  M      
Sbjct: 239 GLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
              P+V ++  +I+G  ++G  +KA+ LFL+++      P+V TY  +I G CK + ++R
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI-DRGIPPDVVTYNTVIDGLCKAQVVDR 357

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A+ + ++M ++G+ P+  TY  LI+G+   G ++    L++ M      P+ + Y  ++D
Sbjct: 358 AKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLD 417

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
            LCK GR  EA  +     ++ ++ D              A   +A+ +F +M + GL+P
Sbjct: 418 YLCKNGRCTEARNIFDSVIRKGIKPD--------------AMIDEAVCIFDKMRQQGLSP 463

Query: 471 DIHAYTTLIAAFCR-----------------------QKKMKESEKFFQEAITAGLFPTK 507
           ++  Y  LI A C+                        +K +++E+   E +  G+    
Sbjct: 464 NVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDV 523

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
             + +++C   R+G +  A +  + M ++G  PD I+Y  L+ G C   + DEA +  + 
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 568 MIGKGISPCEVTRVTLAYEYCK 589
           M+  G+ P E T  TL + YCK
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCK 605



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 234/542 (43%), Gaps = 46/542 (8%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD-EMCAR 217
           ++  F  +GRL+ GF++   +   G  +     N+++   C+   ++ A  +    M   
Sbjct: 201 LIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEF 260

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI---LDNATLTLLITAFCDKGFR 274
           G   +  SY  +V  +C   R  EA   L  M D   +    D  +   +I  F    FR
Sbjct: 261 GCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF----FR 316

Query: 275 -GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G + +A+ L  +M+ +G  P+V T+  +IDGLCK    ++A  +F +++     KP+  
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQML-DKGVKPSNG 375

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN----------- 382
           TY  +I GY    K      LLE M    L P+   Y  L+   CK G            
Sbjct: 376 TYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSV 435

Query: 383 ----------FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
                      + A  + D M ++G +PN+  Y A+ID LCK GRV +A  +LK  F + 
Sbjct: 436 IRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA--ILK--FNQM 491

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
           +      Y +   E  ++AE      L   M+  G+  D+  + TL+   CR+ ++ E++
Sbjct: 492 INE---VYGLCTVEKWEKAEE-----LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQ 543

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           +  +  +  G+ P   +Y +++ G+   G    A K    M  IG  P+  TY  L+ G 
Sbjct: 544 RLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGY 603

Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL--DKKLW-I 609
           CK  ++D+A      M+  G +P  VT  T+ +   + G  + A  +  ++   +  W +
Sbjct: 604 CKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDM 663

Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
            T N ++  LC    V  A   F  L  K   +  ++   +  A  +  K     DL   
Sbjct: 664 YTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFAT 723

Query: 670 IA 671
           I+
Sbjct: 724 IS 725



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 204/450 (45%), Gaps = 55/450 (12%)

Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
           SNG +        C++  +   G+ KE   ++ EM+ + L         ++   C+ G  
Sbjct: 373 SNGTY-------NCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRC 425

Query: 205 EYAEEVFDEMCARGVCADA---------------------SSYKLMVVAYCRMGRVTEA- 242
             A  +FD +  +G+  DA                      +Y  ++ A C++GRV +A 
Sbjct: 426 TEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAI 485

Query: 243 ----------------DRWLSA------MLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
                           ++W  A      MLD+G  LD   + +  T  CD    G + +A
Sbjct: 486 LKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLD---VVVFNTLMCDLCREGRVMEA 542

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L+E M+R G +P+V ++  L+DG C  G T++A +L L ++ S   KPN  TY  ++ 
Sbjct: 543 QRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKL-LDVMVSIGLKPNEFTYNTLLH 601

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYCK  +++ A  LL  M   G  P+  TY ++++G  + G F  A +L   M       
Sbjct: 602 GYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW 661

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++Y YN I++GLCK   V EA+++ +    + LQ   IT+ I++   LK  + + A+ LF
Sbjct: 662 DMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLF 721

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             +   GL PD+  Y  +     ++  ++E    F      G  P      +++  +L  
Sbjct: 722 ATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHR 781

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           G+IS A  Y  ++++   + +  T   LIS
Sbjct: 782 GDISRAGAYLSKLDEKNFSLEASTASMLIS 811



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 202/462 (43%), Gaps = 44/462 (9%)

Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRM-GR---------VTEADRWLSAMLDRGAIL 256
           A ++FD +      A  +++  ++ A  R  GR         ++  DR +    D+ A  
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAP- 193

Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
           D  T ++LI  FC  G    ++  F +   +++ GW+ N      L+ GLC     ++A 
Sbjct: 194 DRCTYSILIGCFCRMG---RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERM-KEQGL--LPNTNTYTSL 373
            + L  +      PNV +Y  ++ G+C E +   A  LL  M  +QGL   P+  +Y ++
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           I G  + G  ++AY+L   M   G  P++  YN +IDGLCK   V  A  + ++   + +
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
           +    TY  L+  +L   + K+ + L   M    L PD   Y  L+   C+  +  E+  
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
            F   I  G+ P              D  I  AV  F +M Q G +P+ + YGALI  LC
Sbjct: 431 IFDSVIRKGIKP--------------DAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALC 476

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV- 612
           K  ++D+A   +  MI +    C V +   A E           ++ E LD+ + +  V 
Sbjct: 477 KLGRVDDAILKFNQMINEVYGLCTVEKWEKAEE-----------LVFEMLDQGIRLDVVV 525

Query: 613 -NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            NTL+  LC E RV  A      +L      D +S   L + 
Sbjct: 526 FNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDG 567



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 4/310 (1%)

Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
           +V EM + G+ L     N ++   C  G V  A+ + + M   GV  D  SY  +V  +C
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
             GR  EA + L  M+  G   +  T   L+  +C K  R  I  A+ LL EM+  G  P
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYC-KARR--IDDAYSLLREMLMNGPTP 626

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
           +V T+  ++ GL + G   +A  L+L ++ S   + +++TY  +++G CK   ++ A  +
Sbjct: 627 DVVTYNTILHGLFQTGRFSEAKELYLNMINS-RTQWDMYTYNIILNGLCKNNCVDEAFKM 685

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            + +  +GL  +  T+  +I    K G  E A DL   +   G  P++  Y  I + L K
Sbjct: 686 FQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIK 745

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G ++E   L     +     +      L+   L + +  +A     ++ +   + +   
Sbjct: 746 EGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEAST 805

Query: 475 YTTLIAAFCR 484
            + LI+ + R
Sbjct: 806 ASMLISLYSR 815


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 165/284 (58%), Gaps = 4/284 (1%)

Query: 261 LTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFL 320
             +L+  FC +G    I+ A  + + + + G +P+V +   LI+G  + G  +K FRL  
Sbjct: 139 FNILMHRFCKEG---EIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKT 195

Query: 321 KLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
            +  +    P+V+T T +I+G CKE KM+ A  L   M ++GL+PN  T+T+LI GHCK 
Sbjct: 196 AM-HASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKS 254

Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
           G  + A ++   M ++G +P++  YN +I GLC+KG +++A +L+ +   + L+ DKITY
Sbjct: 255 GRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITY 314

Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
           T L+    K+ + + A  L  RM++  +  D  AYT LI+  C++ +  ++EK  +E ++
Sbjct: 315 TTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLS 374

Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
            GL P   TYT +I G+ + G++ +A K  + M + G  P  +T
Sbjct: 375 VGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 198/382 (51%), Gaps = 11/382 (2%)

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSIKQAFELLEE 286
           L+ +   R G+ + +  + + +  +GA   D    + LITA+ + GF     + F L  +
Sbjct: 35  LIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRK 94

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL---FLKLVRSDNYKPNVHTYTAMISGYC 343
              K W P      VL + L K     K F+L   F K +    Y  +++ +  ++  +C
Sbjct: 95  --HKFWVPFDTCRKVL-EHLMKL----KYFKLVWGFYKEILECGYPTSLYFFNILMHRFC 147

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           KE ++  A+ + + + + GL P+  ++ +LI G+ ++G+ ++ + L   M   G  P++Y
Sbjct: 148 KEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVY 207

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
               +I+GLCK+ ++ EA EL  +   + L  + +T+T L+  H K      AL ++ +M
Sbjct: 208 TNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQM 267

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++ G +PD+  Y TLI   CR+  +K++     E    GL P K TYT++I G  ++G++
Sbjct: 268 LRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
            +A +  +RM +     D++ Y ALISGLC++ +  +A +    M+  G+ P   T   +
Sbjct: 328 ETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMI 387

Query: 584 AYEYCKQGDSATAMIILESLDK 605
              +CKQGD  TA  +L+ + +
Sbjct: 388 INGFCKQGDVKTASKLLKEMQR 409



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 193/407 (47%), Gaps = 11/407 (2%)

Query: 70  LESYYQQFHLRSSPPRLN-----LQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAI 124
           L SY    H  S+  R+      +QI +     + A  V A++    G+  +  + +  +
Sbjct: 13  LHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGL 72

Query: 125 GFAKFRH-FMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG 183
             A     F+R  I C   L     F    +  + ++    ++   K  +    E+   G
Sbjct: 73  ITAYLESGFLRDAIECF-RLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
            P      N ++   C+ G +  A+ VFD +   G+     S+  ++  Y R+G + +  
Sbjct: 132 YPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGF 191

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
           R  +AM   G   D  T T+LI   C +     + +A EL  EM+ KG  PN  T T LI
Sbjct: 192 RLKTAMHASGVHPDVYTNTVLINGLCKE---SKMDEANELFNEMLDKGLVPNGVTFTTLI 248

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
           DG CK G  + A  ++ +++R   Y P++ TY  +I G C++  + +A  L+  M  +GL
Sbjct: 249 DGHCKSGRVDLALEIYKQMLRQ-GYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGL 307

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
            P+  TYT+LI G CK G+ E A++L   M +E    +  AY A+I GLC++GR  +A +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEK 367

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           +L++     L+ +  TYT++++   KQ + K A  L   M + G  P
Sbjct: 368 MLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           K  +   +E++  G+  ++Y   +L+   CK+G    A  +F  + +    +P+V ++  
Sbjct: 118 KLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKC-GLRPSVVSFNT 176

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+GY +   +++   L   M   G+ P+  T T LI G CK    + A +L + M  +G
Sbjct: 177 LINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKG 236

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             PN   +  +IDG CK GRV  A E+ K+  ++    D ITY  L+    ++ + KQA 
Sbjct: 237 LVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQAR 296

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M   GL PD   YTTLI   C++  ++ + +  +  I   +      YT++I G 
Sbjct: 297 DLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGL 356

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
            ++G    A K  + M  +G  P+N TY  +I+G CKQ  +  A +  + M   G  PC 
Sbjct: 357 CQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCV 416

Query: 578 VT 579
           VT
Sbjct: 417 VT 418



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 4/278 (1%)

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           +IY ++ +I    + G +++A E  +   + +      T   +L   +K    K   G +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
             +++ G    ++ +  L+  FC++ +++ ++  F      GL P+  ++ ++I GY+R 
Sbjct: 125 KEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRL 184

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G++    +    M+  G  PD  T   LI+GLCK+SK+DEA + +  M+ KG+ P  VT 
Sbjct: 185 GDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTF 244

Query: 581 VTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
            TL   +CK G    A+ I + + ++ +   + T NTLI  LC +  +  A     ++  
Sbjct: 245 TTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSM 304

Query: 638 KDQNVDRVSLAAL-KNACYESNKYALFSDLSQRIAEGI 674
           K    D+++   L   +C E +    F    + I E I
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESI 342



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G LK+   +++EM+  GL     T   ++  +C+ G +E A E+   M    +  D  +Y
Sbjct: 290 GDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAY 349

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             ++   C+ GR  +A++ L  ML  G   +N T T++I  FC +   G +K A +LL+E
Sbjct: 350 TALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQ---GDVKTASKLLKE 406

Query: 287 MVRKGWKPNVYT 298
           M R G  P V T
Sbjct: 407 MQRDGHVPCVVT 418


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 4/363 (1%)

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
           A + +Y  ++      G V + D     M + G +    T   +I      G    I+ A
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSG---QIEAA 356

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
                EM   G  P+V T+  L++G CK G  ++A  LF  L R+    P V TY  +I 
Sbjct: 357 QAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRA-GLAPTVLTYNILID 415

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
           GYC+   +  A  L E M EQG LP+  TYT L+ G   V +     +  D M  +G  P
Sbjct: 416 GYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP 475

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           + +AYN  I      G + ++++L +      + +D +TY IL+    K    K A  L 
Sbjct: 476 DCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELM 535

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            +M+  GL PD   YT LI A C +  ++E+ KFF + I+ GL P+  TYT +I  Y R 
Sbjct: 536 MQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRR 595

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           GN+ SA  +F++M + G  P+ ITY  LI  LC+  +   A + +  M+ +G+ P + T 
Sbjct: 596 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTY 655

Query: 581 VTL 583
             L
Sbjct: 656 TLL 658



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 219/468 (46%), Gaps = 14/468 (2%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           EM ++G+       N+V+ +  +    +    V  EM   G+     +Y  ++ ++ + G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 238 RVTEADRWLSAMLDRGA--ILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
           R  + D  L  M  RG+  + ++ T  ++I     KG+     +  E +    R   K +
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM----RLSKKAS 301

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
            +T+  LI GL  +G+ +K   L L++  ++   P V TY AMI G  +  ++  A+   
Sbjct: 302 SFTYNPLITGLLARGFVKKVDDLQLEM-ENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M+  GLLP+  TY SL+ G+CK GN + A  L   + + G  P +  YN +IDG C+ 
Sbjct: 361 VEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 420

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           G ++EA  L ++  ++    D  TYTIL+               F  M+  GL PD  AY
Sbjct: 421 GDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAY 480

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            T I A      + +S +  +  +  G+     TY  +I G  + GN+  A +   +M  
Sbjct: 481 NTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMIS 540

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G  PD ITY  LI   C++  L EA +F+  MI  G+ P  VT   + + YC++G+  +
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600

Query: 596 AM-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           A      ++ E ++      T N LI  LC   R  +A   F+++L +
Sbjct: 601 AYGWFRKMLEEGVEPNEI--TYNVLIHALCRMGRTQLAYRHFYEMLER 646



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 178/367 (48%), Gaps = 12/367 (3%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PLIT  L R        G V+  +++  EM   G+     +Y  M+    + G++  A  
Sbjct: 307 PLITGLLAR--------GFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
               M   G + D  T   L+  +C  G +   K+A  L  ++ R G  P V T+ +LID
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQ---KEALLLFGDLRRAGLAPTVLTYNILID 415

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G C+ G  E+A RL  ++V      P+V+TYT ++ G      +       + M  +GL 
Sbjct: 416 GYCRLGDLEEARRLKEEMVEQGCL-PDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLR 474

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+   Y + I     +G+  +++ L +++  EG + +   YN +IDGLCK G +++A EL
Sbjct: 475 PDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEEL 534

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
           + +     LQ D ITYT L+  H ++   ++A   F  M+  GL P    YT +I A+CR
Sbjct: 535 MMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCR 594

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +  +  +  +F++ +  G+ P + TY  +I    R G    A ++F  M + G  P+  T
Sbjct: 595 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYT 654

Query: 545 YGALISG 551
           Y  LI G
Sbjct: 655 YTLLIDG 661



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 172/363 (47%), Gaps = 10/363 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++     G +K+   + +EM N G+     T N ++    + G +E A+  F EM A G
Sbjct: 308 LITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMG 367

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  +Y  ++  YC+ G   EA      +   G      T  +LI  +C     G ++
Sbjct: 368 LLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR---LGDLE 424

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDG---LCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           +A  L EEMV +G  P+VYT+T+L+ G   +C    T + F   L    S   +P+   Y
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML----SKGLRPDCFAY 480

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
              I        ++++  L E +  +G+  +T TY  LI G CK GN + A +LM  M  
Sbjct: 481 NTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMIS 540

Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
            G  P+   Y  +I   C++G ++EA +         L    +TYT+++  + ++     
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           A G F +M++ G+ P+   Y  LI A CR  + + + + F E +  GL P K TYT +I 
Sbjct: 601 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660

Query: 516 GYL 518
           G L
Sbjct: 661 GKL 663


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 4/375 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C++G    A +V  ++  + V  +   Y  ++   C+   VT+A    S M+ +      
Sbjct: 169 CKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTV 228

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T + LI  FC     G  K AF L  EMV K   P+ YT  +L+D LCK+G  ++A + 
Sbjct: 229 VTFSSLIYGFC---IVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA-KN 284

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            + ++  +  +P V TY  ++ GYC   ++ +A+ +L  +    + PN+ +Y  +I G C
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
           K+   + A  L   M   G  P+   YN++IDGLCK GR+  A+EL+ +     + AD +
Sbjct: 345 KIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIV 404

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY  L+    K     +A+ L  ++ + G+ P++  Y  LI   C+  ++K ++  FQ+ 
Sbjct: 405 TYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDL 464

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
           +  G      TY  MI G  ++G    A     +M   G  PD +TY  +I  L  + + 
Sbjct: 465 LIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDEN 524

Query: 559 DEACQFYESMIGKGI 573
           ++A +    M+ KG+
Sbjct: 525 EKAQKLLREMVIKGV 539



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 27/453 (5%)

Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
           +M ++GV  D  +  +++  YC +G++T A    + +L  G  L+               
Sbjct: 92  QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLN--------------- 136

Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
             G + +A    + ++  G+  N  T+ +LI+GLCK G T  A ++ L+ +       NV
Sbjct: 137 --GKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQV-LRQIEGKLVNTNV 193

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
             Y+ +I G CK++ +  A  L   M  + + P   T++SLIYG C VG F+ A+ L + 
Sbjct: 194 VMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNE 253

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M  +   P+ Y +N ++D LCK+G+++EA  ++    +  ++   +TY  L+  +    E
Sbjct: 254 MVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
             +A  +   + +  + P+  +Y  +I  FC+ K + E+   F E    G+ P K TY S
Sbjct: 314 VGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAP-DNITYGALISGLCKQSKLDEACQFYESMIGK 571
           +I G  + G I  A +    M+   C P D +TY +LI   CK   +D+A    + +   
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHN-NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL-----DKKLWIRTVNTLIRKLCSEKRVG 626
           GI P   T   L    CK G    A  + + L     +   W  T N +I  LC E    
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW--TYNIMINGLCKEGLFD 490

Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
            A +   K+       D V+   +  A +  ++
Sbjct: 491 EAEVLLSKMEDNGIIPDAVTYETIIQALFHKDE 523



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 201/452 (44%), Gaps = 25/452 (5%)

Query: 173 FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS-------- 224
            S+  +M + G+     TL+ ++   C LG + +A  VF ++   G+C +          
Sbjct: 87  LSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFH 146

Query: 225 -------------SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
                        +Y +++   C+MG+   A + L  +  +    +    + +I   C  
Sbjct: 147 DHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKD 206

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
                +  A+ L  EM+ K   P V T + LI G C  G  + AFRLF ++V   N  P+
Sbjct: 207 KL---VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK-NINPD 262

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
            +T+  ++   CKE K+  A+ ++  M ++G+ P   TY +L+ G+C V    +A  ++ 
Sbjct: 263 AYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLS 322

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
           ++ +    PN  +YN +I+G CK   V EA  L  +   R +   K+TY  L+    K  
Sbjct: 323 IISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAG 382

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
               A  L   M    +  DI  Y +LI  FC+ + + ++    ++    G+ P   TY 
Sbjct: 383 RIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYN 442

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I G  + G + +A   FQ +   G   +  TY  +I+GLCK+   DEA      M   
Sbjct: 443 ILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDN 502

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           GI P  VT  T+      + ++  A  +L  +
Sbjct: 503 GIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 178/385 (46%), Gaps = 4/385 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           F   H     +++   ++G+ +    ++ ++    +       + ++   C+  LV  A 
Sbjct: 154 FHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAY 213

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            ++ EM  + +     ++  ++  +C +G+  +A R  + M+ +    D  T  +L+ A 
Sbjct: 214 GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDAL 273

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
           C +   G IK+A  ++  M+++G +P V T+  L+DG C      KA +  L ++     
Sbjct: 274 CKE---GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA-KHVLSIISRMRV 329

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN  +Y  MI+G+CK + ++ A  L   M  +G+ P+  TY SLI G CK G    A++
Sbjct: 330 APNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWE 389

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L+D M       +I  YN++ID  CK   V +A  L+KK  +  +Q +  TY IL+    
Sbjct: 390 LVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC 449

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
           K  + K A  +F  ++  G N +   Y  +I   C++    E+E    +    G+ P   
Sbjct: 450 KGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAV 509

Query: 509 TYTSMICGYLRDGNISSAVKYFQRM 533
           TY ++I           A K  + M
Sbjct: 510 TYETIIQALFHKDENEKAQKLLREM 534



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F  +G+ K+ F +  EM    +     T N +V   C+ G ++ A+ V   M   G
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V     +Y  ++  YC +  V +A   LS +       ++ +  ++I  FC       + 
Sbjct: 294 VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKM---VD 350

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP-NVHTYTA 337
           +A  L  EM  +G  P+  T+  LIDGLCK G    A+ L  ++   +N  P ++ TY +
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM--HNNCIPADIVTYNS 408

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I  +CK + +++A  L++++KE G+ PN  TY  LI G CK G  + A D+   +  +G
Sbjct: 409 LIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              N + YN +I+GLCK+G   EA  LL K     +  D +TY  ++     + E ++A 
Sbjct: 469 YNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQ 528

Query: 458 GLFCRMVKAGL 468
            L   MV  G+
Sbjct: 529 KLLREMVIKGV 539



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 22/293 (7%)

Query: 82  SPPRLNLQIDIDSLTHE----QAITVVASLANEAGSMVALSFFYWAIGF------AKFRH 131
           +P      I +D+L  E    +A  V+A +  E      +++     G+       K +H
Sbjct: 260 NPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKH 319

Query: 132 FMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTL 191
            +        S+IS             M++ F +I  + E   +  EM   G+     T 
Sbjct: 320 VL--------SIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTY 371

Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
           N ++   C+ G + YA E+ DEM    + AD  +Y  ++  +C+   V +A   +  + +
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
            G   +  T  +LI   C KG  G +K A ++ ++++ KG+  N +T+ ++I+GLCK+G 
Sbjct: 432 HGIQPNMCTYNILIDGLC-KG--GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGL 488

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
            ++A  + L  +  +   P+  TY  +I     +++  +A+ LL  M  +G++
Sbjct: 489 FDEA-EVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 33/217 (15%)

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR------------- 484
           +TY I    H         L L  +M   G+ PD+   + LI  +C              
Sbjct: 73  LTYLIKTKNHYPTV-----LSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAK 127

Query: 485 --------QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
                     K+ E+  F    +  G      TY  +I G  + G   +A++  +++   
Sbjct: 128 ILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGK 187

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
               + + Y  +I GLCK   + +A   Y  MI K I P  VT  +L Y +C  G    A
Sbjct: 188 LVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDA 247

Query: 597 M-----IILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
                 +++++++   +  T N L+  LC E ++  A
Sbjct: 248 FRLFNEMVMKNINPDAY--TFNILVDALCKEGKIKEA 282


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 174/343 (50%), Gaps = 4/343 (1%)

Query: 252 RGAILDNATLTLLITAFCDKG---FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
           RG   D   L +L+  FC  G       +K+     ++++ KG++ N  ++  LIDGLCK
Sbjct: 37  RGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCK 96

Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
            G T  A ++ L+ +     +PNV  Y+ +I   CK++ +  A  L  +M  + + P+  
Sbjct: 97  AGETRAAMQV-LRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVI 155

Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
           TY +L+YG   VG  + A  L + M  +   P+IY +N ++DGLCK+G +++A  +L   
Sbjct: 156 TYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVM 215

Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
            ++ +  D ITY  L+  +    +  +A  +F  M + G+ PD+H+Y+ +I   C+ K +
Sbjct: 216 IKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMV 275

Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
            E+    +E  +  + P   TY+S+I G  + G I  A      M+  G   D ITY +L
Sbjct: 276 DEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSL 335

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
           +  LCK  ++D+A      +  +GI P   T   L    CK G
Sbjct: 336 LDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNG 378



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 220/468 (47%), Gaps = 38/468 (8%)

Query: 112 GSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIG---- 167
            S+V ++ F+  I  +   H M L  +  T L++          +  +V+ F  +G    
Sbjct: 16  ASLVKINHFHTVISLS---HQMELRGI-QTDLVN----------LNILVNCFCHLGQVCL 61

Query: 168 --RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASS 225
             ++KE      ++   G  L   +   ++   C+ G    A +V   +    V  +   
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
           Y  ++ + C+   V +A    S ML +    D  T   L+         G +K+A  L  
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCL---IVGRLKEAVGLFN 178

Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
           +M+ K  KP++YT  +L+DGLCK+G  +KA R  L ++   +  P+V TY +++ GY   
Sbjct: 179 QMLLKNIKPDIYTFNILVDGLCKEGEMKKA-RNVLAVMIKQSVDPDVITYNSLMDGYFLV 237

Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
           ++ N+A  +   M  +G+ P+ ++Y+ +I G CK    + A +L+  M  +   PN   Y
Sbjct: 238 KQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTY 297

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           +++IDGL K GR+ +A++L+ +   R   AD ITY  LL    K  +  +A+ L  ++  
Sbjct: 298 SSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKD 357

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G+ PDI+ YT L+   C+  ++K++++ +Q                +I GY  D     
Sbjct: 358 QGIQPDIYTYTILVDGLCKNGRLKDAQEVYQ--------------ILLIKGYHLDSLFDK 403

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
           A+    +M   GC P+ +T+  LI  L +    D+A +    MI +G+
Sbjct: 404 ALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 145/361 (40%), Gaps = 46/361 (12%)

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF-- 383
           +N  P +  +  + +   K    +    L  +M+ +G+  +      L+   C +G    
Sbjct: 2   NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61

Query: 384 ----ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR---------------------- 417
               +      D +  +G   N  +Y  +IDGLCK G                       
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121

Query: 418 -------------VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
                        V +A++L  +   + +  D ITY  L+   L     K+A+GLF +M+
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
              + PDI+ +  L+   C++ +MK++       I   + P   TY S++ GY      +
Sbjct: 182 LKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQEN 241

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A   F  M + G  PD  +Y  +I+GLCK   +DEA    + M  K ++P  VT  +L 
Sbjct: 242 KATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301

Query: 585 YEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
               K G    A  ++  +  +     + T N+L+  LC   +V  A     K+  KDQ 
Sbjct: 302 DGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI--KDQG 359

Query: 642 V 642
           +
Sbjct: 360 I 360



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 40/263 (15%)

Query: 138 VCATSLISNGNFERAHEVMQCMVSSFAE-----IGRLKEGFSMVIE----------MTNN 182
           +    L   G  ++A  V+  M+    +        L +G+ +V +          M   
Sbjct: 194 ILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARR 253

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           G+     + + ++   C+  +V+ A  +  EM ++ +  +  +Y  ++    + GR+ +A
Sbjct: 254 GVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDA 313

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
              ++ M +RG   D  T   L+ A C       + +A  LL ++  +G +P++YT+T+L
Sbjct: 314 WDLVNEMHNRGQPADVITYNSLLDALCK---NHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 303 IDGLCKKG---------------------WTEKAFRLFLKLVRSDNYKPNVHTYTAMISG 341
           +DGLCK G                       +KA  L  K+   +   PN  T+  +I  
Sbjct: 371 VDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKM-EDNGCTPNPVTFEILIRA 429

Query: 342 YCKEEKMNRAEMLLERMKEQGLL 364
             + +  ++A  LL  M  +GLL
Sbjct: 430 LFENDMNDKAVELLREMIARGLL 452


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 19/423 (4%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++  + + G V +A      MLD G   +  T   +I   C      ++ +A  +L
Sbjct: 254 SYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ---AMDKAEAVL 310

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           ++M+ +   PN  T+  LI G    G WTE A R+  ++ R D  +PNV TY+ +I   C
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTE-AVRILKEMSR-DGQRPNVVTYSMLIDCLC 368

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K      A  +   M + G  PN +TY SL++G+   GN     ++ DLM + G  P  +
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRH 428

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            +N  I   CK GR+ EA     K  Q+    D + YT ++    K      A+  FC+M
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM 488

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +  GL+PDI  + TLI  F    K +++E+ F E +  G+ P   T+ SMI    ++G +
Sbjct: 489 IDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKV 548

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
           + A K F  M + G  P+ ++Y  +I G     ++ E  +  + M+  G+ P  VT  TL
Sbjct: 549 TEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 608

Query: 584 AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
                        M+   S+  K  + T  TLI   C + R+      F ++LGK    D
Sbjct: 609 ----------LDGMV---SMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTD 655

Query: 644 RVS 646
            ++
Sbjct: 656 TIT 658



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 178/376 (47%), Gaps = 21/376 (5%)

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEK-------AFRLFLKLVRSDNYK- 329
           + A +L +E++++    ++Y    L+  + +   +         A  +F ++ R+   K 
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 330 -PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P++ T+  +IS  C    +N     L ++ + GL     T+T L+   C     +R  D
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAE---KRTSD 197

Query: 389 LMDL----MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ--RELQADKITYTI 442
            M++    M + GCTP++++Y  ++ GLC + + +EA EL+    +       + ++YT 
Sbjct: 198 AMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTT 257

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           ++    K+ +  +A  LFC+M+  G+ P++    ++I   C+ + M ++E   Q+ I   
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           + P   TY S+I GYL  G  + AV+  + M++ G  P+ +TY  LI  LCK     EA 
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKL 619
           + + SMI  G  P   T  +L + Y  +G   D      ++     +      N  I   
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAY 437

Query: 620 CSEKRVGMAALFFHKL 635
           C   R+  A+L F+K+
Sbjct: 438 CKCGRLDEASLTFNKM 453



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 58/340 (17%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  +   G+  E   ++ EM+ +G      T + ++   C+ GL   A E+F+ M   G
Sbjct: 328 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSG 387

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +AS+Y  ++  Y   G + + +     M+  G         + I A+C  G    + 
Sbjct: 388 QKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG---RLD 444

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A     +M ++G+ P++  +T +IDGLCK G  + A   F +++  D   P++ T+  +
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMI-DDGLSPDIITFNTL 503

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+    K  +AE L   M ++G+ PN NT+ S+I    K G    A  L DLM + G 
Sbjct: 504 IHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGA 563

Query: 399 TPNIYAY-----------------------------------NAIIDGL----------- 412
            PN+ +Y                                   N ++DG+           
Sbjct: 564 KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVT 623

Query: 413 --------CKKGRVQEAYELLKKAFQRELQADKITYTILL 444
                   C+ GR+++   L ++   +  + D IT  I L
Sbjct: 624 CKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 663



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 6/270 (2%)

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
           ++ M   G +   P+I  +  +I   C  G +   +  L +  +  L+A  +T+T LL  
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT 188

Query: 447 HLKQAETKQALGLFC-RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG--L 503
              +  T  A+ +   RM + G  PD+ +YTTL+   C +KK +E+ +        G   
Sbjct: 189 LCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNC 248

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P   +YT++I G+ ++G++  A   F +M   G  P+ +T  ++I GLCK   +D+A  
Sbjct: 249 PPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEA 308

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLC 620
             + MI + I P   T  +L + Y   G    A+ IL+ + +   +  + T + LI  LC
Sbjct: 309 VLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC 368

Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
                  A   F+ ++   Q  +  +  +L
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSL 398


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 200/403 (49%), Gaps = 4/403 (0%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  +  E  ++V  M   G      T   V+   C+ G  + A  + ++M    
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           + AD   Y  ++   C+   + +A    + M  +G   D  T   LI+  C+    G   
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN---YGRWS 302

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A  LL +M+ K   P++     LID   K+G   +A +L+ ++V+S +  P+V  Y  +
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK +++     +   M ++GL+ NT TYT+LI+G  +  + + A  +   M  +G 
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+I  YN ++DGLC  G V+ A  + +   +R+++ D +TYT ++    K  + +    
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           LFC +   G+ P++  YTT+++ FCR+   +E++  F E    G  P   TY ++I   L
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           RDG+ +++ +  + M   G A D  T+G L++ +    +LD++
Sbjct: 543 RDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS 584



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 217/445 (48%), Gaps = 43/445 (9%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           ++M   G+  +  +Y + +  +CR  +++ A   L  M+  G      TL  L+  FC  
Sbjct: 99  EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC-H 157

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
           G R  I +A  L+++MV  G++P+  T T L+ GL +     +A  L  ++V     +P+
Sbjct: 158 GNR--ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPD 214

Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
           + TY A+I+G CK  + + A  LL +M++  +  +   Y ++I G CK  + + A+DL +
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274

Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
            M  +G  P+++ YN +I  LC  GR  +A  LL    ++ +  D + +  L+   +K+ 
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334

Query: 452 ETKQALGLFCRMVKAG-LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
           +  +A  L+  MVK+    PD+ AY TLI  FC+ K+++E  + F+E    GL     TY
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394

Query: 511 TSMICGYLR-----------------------------------DGNISSAVKYFQRMNQ 535
           T++I G+ +                                   +GN+ +A+  F+ M +
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DS 593
                D +TY  +I  LCK  K+++    + S+  KG+ P  VT  T+   +C++G  + 
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514

Query: 594 ATAMIILESLDKKLWIR-TVNTLIR 617
           A A+ +    D  L    T NTLIR
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIR 539



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 195/395 (49%), Gaps = 9/395 (2%)

Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
           L E+M   G   N+YT+++ I+  C++     A  +  K+++   Y P++ T  ++++G+
Sbjct: 97  LGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKL-GYGPSIVTLNSLLNGF 155

Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
           C   +++ A  L+++M E G  P+T T+T+L++G  +      A  L++ M  +GC P++
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215

Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
             Y A+I+GLCK+G    A  LL K  + +++AD + Y  ++    K      A  LF +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275

Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
           M   G+ PD+  Y  LI+  C   +  ++ +   + +   + P    + ++I  ++++G 
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 523 ISSAVKYFQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
           +  A K +  M     C PD + Y  LI G CK  +++E  + +  M  +G+    VT  
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395

Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
           TL + + +  D   A ++ + +        I T N L+  LC+   V  A + F  +  +
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455

Query: 639 DQNVDRVSLAALKNACYESNK----YALFSDLSQR 669
           D  +D V+   +  A  ++ K    + LF  LS +
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 202/445 (45%), Gaps = 5/445 (1%)

Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
           ++ F    +L    +++ +M   G      TLN ++   C    +  A  + D+M   G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
             D  ++  +V    +  + +EA   +  M+ +G   D  T   +I   C    RG    
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK---RGEPDL 233

Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
           A  LL +M +   + +V  +  +IDGLCK    + AF LF K+  +   KP+V TY  +I
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLI 292

Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK-EGC 398
           S  C   + + A  LL  M E+ + P+   + +LI    K G    A  L D M K + C
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P++ AYN +I G CK  RV+E  E+ ++  QR L  + +TYT L+    +  +   A  
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
           +F +MV  G++PDI  Y  L+   C    ++ +   F+      +     TYT+MI    
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + G +      F  ++  G  P+ +TY  ++SG C++   +EA   +  M   G  P   
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532

Query: 579 TRVTLAYEYCKQGDSATAMIILESL 603
           T  TL     + GD A +  +++ +
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEM 557



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 148/372 (39%), Gaps = 51/372 (13%)

Query: 293 KPNVYTHTVLIDG-----LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           K  ++ HTVL+ G     LC   W E++F        SD+ + N+           ++ K
Sbjct: 10  KKCLHRHTVLLKGNPRTTLC---W-ERSF----AGASSDDCRENLSRKV------LQDLK 55

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  L   M +    P+   ++ L+    K+  F+    L + M   G + N+Y Y+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
            I+  C++ ++  A  +L K  +       +T   LL+         +A+ L  +MV+ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
             PD   +TTL+    +  K  E+    +  +  G  P   TY ++I G  + G    A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
               +M +     D + Y  +I GLCK   +D+A   +  M  KGI P            
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP------------ 283

Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
                                + T N LI  LC+  R   A+     +L K+ N D V  
Sbjct: 284 --------------------DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323

Query: 648 AALKNACYESNK 659
            AL +A  +  K
Sbjct: 324 NALIDAFVKEGK 335


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 201/453 (44%), Gaps = 18/453 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +++  A   R  E   ++ EM   G+       N ++G  C  G    A  +FDEM  + 
Sbjct: 87  LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKK 146

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +   A +Y L+  A C+ G +  A+R L  ML  G  +       ++     +  R  ++
Sbjct: 147 MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR--LE 204

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH----- 333
               +  EMV +G +PN    T  +  LCK G  ++A  ++ K +    Y          
Sbjct: 205 SVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQT 264

Query: 334 -----------TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
                      TY  MI G CK+ KM  A  L   M  +G  P+  T+ +L++ +C +G 
Sbjct: 265 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 324

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E  + L+D M  EG  P+I +Y  IIDG CK   +++A E L +   R L+ +   Y  
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384

Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
           L+  + +  +   A+     M   G+ P    Y +L+   C    ++E++  F +A    
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 444

Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
           +      YT MI GY + G +  AV YF+ M   G +P+ +TY  L+    K    +EA 
Sbjct: 445 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 504

Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
           + ++ M+G G+ P  +T  TL     ++G   T
Sbjct: 505 KLFDEMVGSGVIPDNITYGTLIARCSEKGGKTT 537



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 216/516 (41%), Gaps = 96/516 (18%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           C+ G V+   E+  E+   G+     +Y +++ A C+ GRV EA R    M   G     
Sbjct: 22  CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 81

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
            T  +LI     +G R    +   +L+EM + G  PN   +  LI   C+KG   +A RL
Sbjct: 82  VTFGILINGLA-RGER--FGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 138

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE---------------------- 356
           F ++V     KP   TY  +    CKE +M RAE +LE                      
Sbjct: 139 FDEMVLK-KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 197

Query: 357 --------------RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL------------- 389
                          M  +G+ PN    T+ +   CK G  + A  +             
Sbjct: 198 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKE 257

Query: 390 ----MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
               +  M  +G   +   YN +I G CK  +++EA +L     +R  + D  T+  LL 
Sbjct: 258 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLH 317

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
            +    + ++   L  +M   GL PDI +Y T+I   C+ K +++++++  E +  GL P
Sbjct: 318 AYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKP 377

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL----------------- 548
               Y ++I GY R+G+IS A+   + M   G  P N+TYG+L                 
Sbjct: 378 NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 437

Query: 549 ------------------ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
                             I G CK  K+ EA  ++E M  +GISP ++T  TL Y Y K 
Sbjct: 438 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 497

Query: 591 GDSATAMIILESLDKKLWIR---TVNTLIRKLCSEK 623
           G+S  A  + + +     I    T  TLI + CSEK
Sbjct: 498 GNSEEASKLFDEMVGSGVIPDNITYGTLIAR-CSEK 532



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 176/391 (45%), Gaps = 26/391 (6%)

Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
           R   L+  + T +I A C  G    +   FE+L E+ R G +P V T+ VL+D LCK G 
Sbjct: 5   RNVALNEYSYTAMIKALCKAG---KVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGR 61

Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
            E+AFRL  ++       P+V T+  +I+G  + E+     ++L+ M++ G+ PN   Y 
Sbjct: 62  VEEAFRLKGRM-EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 120

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
            LI  HC+ G+  +A  L D M  +   P    YN I   LCK+G ++ A  +L+     
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180

Query: 432 ELQADKITYTILLSEHLKQAET-KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
            +      +  +++  L++    +  + +   MV  G+ P+    T  +   C+  K +E
Sbjct: 181 GMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQE 240

Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
           +   + + +  G +                  +  A K  Q M   G   D+ITY  +I 
Sbjct: 241 AVGIWFKTLNKGKY------------------MKEATKVIQTMLNKGIELDSITYNIMIR 282

Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
           G CK SK++EA + +  M  +G  P   T  TL + YC  G       +L+ +  +    
Sbjct: 283 GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQP 342

Query: 609 -IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
            I +  T+I   C  K +  A  +  +L+ +
Sbjct: 343 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDR 373



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 137/298 (45%), Gaps = 6/298 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+    +  +++E   +  +MT  G      T N ++   C LG +E    + D+M   G
Sbjct: 280 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 339

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D  SY  ++  +C+   + +A  +L+ ++DRG   +      LI  +   G  G I 
Sbjct: 340 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY---GRNGDIS 396

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A + +E M   G +P   T+  L+  +C  G  E+A  +F +  R +N    V  YT M
Sbjct: 397 GAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ-ARENNVDLGVIGYTIM 455

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I GYCK  KM  A    E M+ +G+ PN  TYT+L+Y + K GN E A  L D M   G 
Sbjct: 456 IQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 515

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAY-ELLKKAFQRELQADKITYT-ILLSEHLKQAETK 454
            P+   Y  +I    +KG     Y + L     + L AD I  T +     LK  E++
Sbjct: 516 IPDNITYGTLIARCSEKGGKTTQYGQELHCDLSKLLSADWIMDTQVHFGHQLKHLESQ 573


>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 376

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 190/381 (49%), Gaps = 5/381 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G ++ AE V+ E+    V  DA  Y  M+  + R+GR+ +    L  ++ R    + 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFE-LWELMGREGSRNV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           A+  +++    D    G + +   + E M   G+  +  T+ +L+ G CK  +  K+  +
Sbjct: 60  ASFNIMMRGLFD---NGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L++        +   Y+AMI+G CKE K+++A  +L  M + G  P  + Y +LI G  
Sbjct: 117 -LEMAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLV 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               FE A+ +   MG   C+P I  YN +I+GLCK  R  EAY+L+K+  ++   +  I
Sbjct: 176 GASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVI 235

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+       + + AL L+ ++   G  PD+  +  LI   C   KM+ +   + + 
Sbjct: 236 TYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDI 295

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   T+ +++ G+ +DG+I +A+  + R+ + G  PD I+Y   + GLC  +++
Sbjct: 296 NHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRI 355

Query: 559 DEACQFYESMIGKGISPCEVT 579
            ++  F    + K I P  +T
Sbjct: 356 SDSILFLHDALTKKIVPTIIT 376



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 170/367 (46%), Gaps = 5/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  + +E+V     P+   +  +++G  + G  +  F L+  + R  +   NV +
Sbjct: 4   GDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREGS--RNVAS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G     +++    + E MK  G + ++ TY  L++G CK     ++  ++++  
Sbjct: 62  FNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEMAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   + +AY+A+I+GLCK+ ++ +A  +L    +   +     Y  L++  +  ++ +
Sbjct: 122 RKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKFE 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  +F  M     +P I  Y TLI   C+ ++  E+    +E +  G   +  TY+ +I
Sbjct: 182 DAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLI 241

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G      +  A++ + ++   G  PD   +  LI GLC   K+  A   Y  +     +
Sbjct: 242 KGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCA 301

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  VT  TL   + K GD   A++I   + +      I + N  ++ LCS  R+  + LF
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDSILF 361

Query: 632 FHKLLGK 638
            H  L K
Sbjct: 362 LHDALTK 368



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 33/273 (12%)

Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
           C+ G+ + A  +   + +   +P+   YN +++G  + GR+++ +EL +    RE   + 
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWE-LMGREGSRNV 59

Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
            ++ I++       E  + + ++  M  +G   D   Y  L+  FC+ + + +S    + 
Sbjct: 60  ASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEM 119

Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
           A   G       Y++MI G  ++  +  AV     M + GC P    Y ALI+GL   SK
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASK 179

Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
            ++A + +  M   G + C  T                             I T NTLI 
Sbjct: 180 FEDAFRVFHEM---GTTHCSPT-----------------------------IVTYNTLIN 207

Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
            LC  +R G A     ++L K  N   ++ + L
Sbjct: 208 GLCKGERFGEAYDLVKEMLEKGWNSSVITYSLL 240



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 4/220 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M++   +  +L +  S++  M  +G        N ++         E A  VF EM    
Sbjct: 135 MINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKFEDAFRVFHEMGTTH 194

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
                 +Y  ++   C+  R  EA   +  ML++G      T +LLI   C       ++
Sbjct: 195 CSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLIKGLC---LGHKVE 251

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A +L  ++  KG+KP+V  H +LI GLC  G  + A  L+   +   N  PN+ T+  +
Sbjct: 252 MALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD-INHWNCAPNLVTHNTL 310

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
           + G+ K+  +  A ++  R+   GL P+  +Y   + G C
Sbjct: 311 MEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLC 350


>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
 gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 208/483 (43%), Gaps = 73/483 (15%)

Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA----DR 244
           S+ N ++   C  G V++AE +F  M   G   D  SY  ++  YC   ++ +A    +R
Sbjct: 57  SSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNR 116

Query: 245 WLSAMLDRGA-----ILDNA--------------------------TLTLLITAFCDKGF 273
                L+R       IL N                           T    +  FC    
Sbjct: 117 VRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCK--- 173

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G +K    +  +M++ G  PN+   + LIDG CK G  + AF  F ++ +  + +PN  
Sbjct: 174 MGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERM-KECSVRPNEF 232

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
           TY+ +I G  K   + RA+ L E+M    +LPN   YTS+I GH K GN + A   ++ M
Sbjct: 233 TYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQM 292

Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
                  ++ AY  II G  + GR  ++ E  +   +  L  D+I  T ++  H K    
Sbjct: 293 FDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNI 352

Query: 454 KQALGLFCRMVKAGLNPDI------------HAY------------------TTLIAAFC 483
           K+AL  +  ++  G   D+            H Y                  T  I A C
Sbjct: 353 KEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALC 412

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           ++  + ++EK  +E   AG  P K  YTS I    + GN+  A    +RM Q    PD +
Sbjct: 413 KEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLL 472

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT----AMII 599
           TY +LI GL ++  + EA Q ++ M+ KGI+P  V+   L   Y  QG+ A      +II
Sbjct: 473 TYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISDFVLII 532

Query: 600 LES 602
           L S
Sbjct: 533 LSS 535



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 205/487 (42%), Gaps = 43/487 (8%)

Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
           ++G     SS+  ++  +CR G V  A+    +M   G   D  +   L+  +C      
Sbjct: 49  SKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSY--- 105

Query: 276 SIKQAFELLEEMVRKGW---KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
            I++A  L+  +  +G    +P++    +L +G  K     +AF  F  + +     P++
Sbjct: 106 QIQKACFLVNRV--RGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKY--CLPSI 161

Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
            TY   +  +CK   M     +   M + G++PN   ++SLI G+CK G+ + A++  + 
Sbjct: 162 VTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFER 221

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
           M +    PN + Y+ +IDG  K G +  A  L +K     +  +   YT ++  H K+  
Sbjct: 222 MKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGN 281

Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
              A+    +M    +  D+ AYT +I+ F R  +  +S +  +     GL P +   T+
Sbjct: 282 VDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTA 341

Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG--------------------- 551
           ++  + + GNI  A+  ++ +   G   D +T  AL+ G                     
Sbjct: 342 IMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANE 401

Query: 552 ---------LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
                    LCK+  LD+A +  + M   G  P +    +   E CKQG+   A ++ + 
Sbjct: 402 ILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKR 461

Query: 603 LDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           + ++     + T ++LI  L  +  +  A   F  +L K    D VS   L    +    
Sbjct: 462 MVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521

Query: 660 YALFSDL 666
            A  SD 
Sbjct: 522 GAAISDF 528



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           LL     +G  P+ +++ S+I   C+ GN + A  +   M + GC+P+I +YN+++DG C
Sbjct: 43  LLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYC 102

Query: 414 KKGRVQEAYELLKKAFQREL-QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
              ++Q+A  L+ +    EL + D + + IL +   K     +A   F  M K  L P I
Sbjct: 103 SSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCL-PSI 161

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
             Y T +  FC+   MK   + F + +  G+ P    ++S+I GY + G++  A +YF+R
Sbjct: 162 VTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFER 221

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
           M +    P+  TY  LI G  K   L  A   +E M+   I P      ++   + K+G+
Sbjct: 222 MKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGN 281

Query: 593 SATAM 597
              A+
Sbjct: 282 VDDAI 286



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 15/227 (6%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++S F  +GR  +       +  NGL      L  ++ +  + G ++ A   +  + A+G
Sbjct: 307 IISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKG 366

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNAT---LTLLITAFCDKGFRG 275
             AD  +   ++    + G + EA R+L        + +NA     T+ I A C +   G
Sbjct: 367 FEADVVTLSALMDGLSKHGYLQEARRYL--------VKENANEILYTVFIDALCKE---G 415

Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
           ++  A ++++EM   G+ P+ + +T  I  LCK+G   KAF +  ++V+ ++ +P++ TY
Sbjct: 416 NLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQ-EHVEPDLLTY 474

Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +++I G  ++  M  A+ + + M  +G+ P+  +Y  LI G+   GN
Sbjct: 475 SSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 7/242 (2%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
           P  +  N ++  L   G    + +LL     +       ++  ++S   +    K A  +
Sbjct: 19  PTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHI 78

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF-PTKETYTSMICGYL 518
           F  M + G +PDI +Y +L+  +C   +++++           L  P    +  +  G+ 
Sbjct: 79  FISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFA 138

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           +    + A  YF  M +  C P  +TYG  +   CK   +    + +  M+  GI P  V
Sbjct: 139 KVYMKNEAFMYFGLMWKY-CLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLV 197

Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHK 634
              +L   YCK G    A    E + K+  +R    T +TLI        +  A   F K
Sbjct: 198 VFSSLIDGYCKAGSLDVAFEYFERM-KECSVRPNEFTYSTLIDGCSKHGMLARADSLFEK 256

Query: 635 LL 636
           +L
Sbjct: 257 ML 258



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 15/118 (12%)

Query: 135 LYIVCATSLISNGNFERAHEVMQCM------------VSSFAEI---GRLKEGFSMVIEM 179
           LY V   +L   GN + A ++++ M             S  AE+   G L + F +   M
Sbjct: 403 LYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRM 462

Query: 180 TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
               +     T + ++G   E GL+  A++VFD+M  +G+  D  SY +++  Y   G
Sbjct: 463 VQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQG 520


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 226/483 (46%), Gaps = 17/483 (3%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++   ++  ++ E  S ++EM  NG      T    +    E G    A++   EM   G
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  +      ++  YC+ G+V EA     +M+++G + D  T T+L+         G + 
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK---NGKVN 612

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A E+  EM  KG  P+V+++  LIDG  K G  +KA  +F ++V++     NV  Y  +
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA-GLTSNVIIYNML 671

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           + G+C+  ++ +A+ LL+ M  +G  PN  TY ++I G+CK G+   A+ L D M  +G 
Sbjct: 672 LGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGL 731

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P+ + Y  ++DG C+   V+ A  + +   ++   +    +  L++   K  +T+    
Sbjct: 732 VPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGKTELTTD 790

Query: 459 LFCRMVKAGLN----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
           +  R++    +    P+   Y  +I   C++  ++ +++ F     A L PT  TYTS++
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI- 573
            GY + G  S     F  +   G  PDNI Y  +I+   K+    +A    + M  K   
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910

Query: 574 -SPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRVG 626
              C+++  T   L   + K G+   A  ++E++ +  +I    TV  LI + C      
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQR 970

Query: 627 MAA 629
           MAA
Sbjct: 971 MAA 973



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 233/510 (45%), Gaps = 10/510 (1%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           RL++  S+++EM + GL       + ++    +    + A  +  EM + G   D   Y 
Sbjct: 295 RLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYD 354

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR-GSIKQAFELLEE 286
             +    + G + +A      M+  G          LI  F    FR  ++++ +ELL E
Sbjct: 355 YFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGF----FREKNVRKGYELLVE 410

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           + ++    + YT+   + G+C  G  + A+ + +K + +   +PNV  YT +I  + ++ 
Sbjct: 411 IKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI-VKEMGASGCRPNVVIYTTLIKTFLQKS 469

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           +   A  +L+ M+EQG+ P+T  Y SLI G  K    + A   +  M + G  P+ + Y 
Sbjct: 470 RFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYG 529

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
           A I G  + G    A + +K+  +  +  +K+  T L++E+ K+ +  +A   F  MV+ 
Sbjct: 530 AFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ 589

Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
           G+  D   YT L+    +  K+ ++E+ F E    G+ P   +Y ++I G+ + GN+  A
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649

Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
              F  M Q G   + I Y  L+ G C+  ++++A +  + M GKG  P  VT  T+   
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709

Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
           YCK GD A A  + + +  K  +       TL+   C    V  A   F     K     
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASS 768

Query: 644 RVSLAALKNACYESNKYALFSDLSQRIAEG 673
                AL N  ++  K  L +D+  R+ +G
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDG 798



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 199/438 (45%), Gaps = 7/438 (1%)

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V+ A E+   M  +G+     SY L++   C+  R+ +A   L  M   G   DN   ++
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
           LI     KG          L+ EMV  G+  +   +   I  + K+G  EKA  LF  ++
Sbjct: 321 LIDGLL-KGRNADAANG--LVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            +    P    Y ++I G+ +E+ + +   LL  +K++ ++ +  TY + + G C  G+ 
Sbjct: 378 -TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDL 436

Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
           + AY+++  MG  GC PN+  Y  +I    +K R  +A  +LK+  ++ +  D   Y  L
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496

Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
           +    K  +  +A      MV+ G  PD   Y   I+ +    +   ++K+ +E +  G+
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556

Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
            P K   T +I  Y + G +  A   F+ M + G   D  TY  L++GL K  K+++A +
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE 616

Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTV---NTLIRKLC 620
            +  M GKGI+P   +  TL   + K G+   A  I + + +      V   N L+   C
Sbjct: 617 IFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676

Query: 621 SEKRVGMAALFFHKLLGK 638
               +  A     ++ GK
Sbjct: 677 RSGEIEKAKELLDEMSGK 694



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 197/445 (44%), Gaps = 21/445 (4%)

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           +V+  M  R V  D  SY++++ A+CR G V  A      +L     L  ATL       
Sbjct: 210 DVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAK---DVLLKTEEELGTATL------- 259

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                  ++ +A EL + M  KG  P+  ++ +LIDGLCK+   E A  L +++     +
Sbjct: 260 -------NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLF 312

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             NV  Y+ +I G  K    + A  L+  M   G   +   Y   I    K G  E+A  
Sbjct: 313 ADNV-AYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKA 371

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
           L D M   G TP   AY ++I+G  ++  V++ YELL +  +R +     TY   +    
Sbjct: 372 LFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMC 431

Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
              +   A  +   M  +G  P++  YTTLI  F ++ +  ++ +  +E    G+ P   
Sbjct: 432 SSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
            Y S+I G  +   +  A  +   M + G  PD  TYGA ISG  +  +   A ++ + M
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551

Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLCSEKRV 625
           +  G+ P +V    L  EYCK+G    A     S+ ++  +   +T   L+  L    +V
Sbjct: 552 LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKV 611

Query: 626 GMAALFFHKLLGKDQNVDRVSLAAL 650
             A   FH++ GK    D  S   L
Sbjct: 612 NDAEEIFHEMRGKGIAPDVFSYGTL 636



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 202/482 (41%), Gaps = 52/482 (10%)

Query: 229 MVVAYCRMGRVTEADRWLS--AMLDRGAILDNA--TLTLLITAFCDKGFRGSIKQAFELL 284
           +V++  R  RV +  + LS   ++D   + +    + + L    C+    GSI++A  ++
Sbjct: 64  VVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCN---FGSIEKAHSVV 120

Query: 285 EEMVRKGW--------------------KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
             M+ + W                       V    +LIDG  +KG+ ++A  +F     
Sbjct: 121 IRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKD 180

Query: 325 SD-NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
            D +  P++     ++    K  +++    + + M E+ ++ +  +Y  LI  HC+ GN 
Sbjct: 181 LDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNV 240

Query: 384 ERAYDLM---------------------DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           + A D++                       M  +G  P+  +YN +IDGLCK+ R+++A 
Sbjct: 241 QLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAK 300

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            LL +     L AD + Y+IL+   LK      A GL   MV  G + D   Y   I   
Sbjct: 301 SLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVM 360

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
            ++  M++++  F   IT G+ P    Y S+I G+ R+ N+    +    + +       
Sbjct: 361 SKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISP 420

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
            TYG  + G+C    LD A    + M   G  P  V   TL   + ++     A+ +L+ 
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480

Query: 603 LDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
           + ++         N+LI  L   K++  A  F  +++      D  +  A  +   E+ +
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 660 YA 661
           +A
Sbjct: 541 FA 542



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 162/373 (43%), Gaps = 27/373 (7%)

Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
           + Y V    L+ NG    A E+   M               +  F+++G +++  S+  E
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655

Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
           M   GL       N ++G  C  G +E A+E+ DEM  +G   +A +Y  ++  YC+ G 
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           + EA +    M  +G + D+   T L+   C       +++A  + E    KG   +   
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFETN-EKGCASSSAP 771

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRS--DNY-KPNVHTYTAMISGYCKEEKMNRAEMLL 355
              LI+ + K G TE    +  +L+    D + KPN  TY  MI   CKE  +  A+ L 
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             M++  L+P   TYTSL+ G+ K+G     + + D +   G  P+   Y+ II+   K+
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891

Query: 416 GRVQEAYELLKKAFQRELQADKITYTI-----LLSEHLKQAETKQALGLFCRMVKAGLNP 470
           G   +A  LL + F +    D    +I     LLS   K  E + A  +   MV+    P
Sbjct: 892 GMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIP 951

Query: 471 DIHAYTTLIAAFC 483
           D      LI   C
Sbjct: 952 DSSTVIELINESC 964


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 228/514 (44%), Gaps = 49/514 (9%)

Query: 110 EAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRL 169
           ++ S  ALSFF W       R   + Y +   +L  + NF +A + +             
Sbjct: 111 QSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFL------------- 157

Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM--CARGVCADASSYK 227
                 ++E+  + LP                     +E+VF  +  C      D   + 
Sbjct: 158 ----CELVELVKDDLP---------------------SEDVFKNLILCTEDCNWDPVVFD 192

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           ++V AY RMGRV E  R    ML  G +    T   L+       +     + +E+ EEM
Sbjct: 193 MLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNY---TDRCWEVYEEM 249

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
            R G  PN+YT  +L   LCK G T K  + FL+ +  + + P++ TY  +I+ YC++ +
Sbjct: 250 ERFGIAPNLYTFNILTHVLCKDGDTGKVNK-FLEKMEEEGFDPDIVTYNTLINSYCRKGR 308

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           ++ A  L + M  +G++P+  +YT+L+ G CK G    A+ L   M   G +P+I  YN 
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           +I G CK+G++QE+  LL       +  D  T  +L+  + K+ +   AL L   + + G
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           ++     Y+ LI A CR+ +   ++   +     G  P  E Y  +I  + +   I+ A+
Sbjct: 429 VSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEAL 488

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP-CEVTRVTLAYE 586
                M      P+  TY A+I  L + S+  E       M+  G+ P  E+ R  L Y 
Sbjct: 489 LLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICR-ALFYG 547

Query: 587 YCKQGDSATAMIILESLDKKLWI---RTVNTLIR 617
           YC++ D   A  +L    K+  I    + N LIR
Sbjct: 548 YCRENDIDKAESLLSFFAKEFQIHDTESFNALIR 581



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 35/314 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGL-PLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +++S+   GRL + F +   M   G+ P + S    + G+ C+ G V  A ++F  M  R
Sbjct: 299 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGL-CKEGRVREAHQLFHRMVHR 357

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG----- 272
           G+  D  +Y  ++  YC+ G++ E+   L  M+  G   D+ T  +L+  +  +G     
Sbjct: 358 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA 417

Query: 273 ---------FRGSIKQ------------------AFELLEEMVRKGWKPNVYTHTVLIDG 305
                    F  SI Q                  A  LLE M + G KP +  +  LI  
Sbjct: 418 LNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKS 477

Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
            C+     +A  L +++V  +  KPN+ TY A+I    +  +    E L+  M   G+LP
Sbjct: 478 FCQCDCIAEALLLKMEMVDKE-IKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLP 536

Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           +     +L YG+C+  + ++A  L+    KE    +  ++NA+I     KG +  + E+ 
Sbjct: 537 DLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQ 596

Query: 426 KKAFQRELQADKIT 439
               +  L  + +T
Sbjct: 597 DMMLKMGLLPNPLT 610



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 33/241 (13%)

Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF 495
           D + + +L+  +L+    ++ L  F RM++ G  P +     L+    +        + +
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246

Query: 496 QEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
           +E    G+ P   T+  +     +DG+     K+ ++M + G  PD +TY  LI+  C++
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306

Query: 556 SKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
            +LD+A   Y+ M  +G+ P  V              S TA                  L
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLV--------------SYTA------------------L 334

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
           +  LC E RV  A   FH+++ +  + D V+   L +  C E       S L   I  GI
Sbjct: 335 MNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGI 394

Query: 675 G 675
            
Sbjct: 395 S 395



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 3/145 (2%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           E+   ++ SF +   + E   + +EM +  +    +T   V+G    L      E +  E
Sbjct: 469 EIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGE 528

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M A G+  D    + +   YCR   + +A+  LS       I D  +   LI     K  
Sbjct: 529 MVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAK-- 586

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYT 298
            G I ++ E+ + M++ G  PN  T
Sbjct: 587 -GDIARSLEIQDMMLKMGLLPNPLT 610


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 241/552 (43%), Gaps = 70/552 (12%)

Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMR-------------LYIVCAT-SLISNGN 148
           V + + N     +   FF WA  F +FR +               L + C T   + NG 
Sbjct: 62  VTSIIQNPPNPQLGFRFFIWASNFKRFRAWESCDLITDLLINQNGLELYCQTLEALKNGG 121

Query: 149 FERAHEVMQCMVSSFAEIGRLKEG------------------FSMVIE------------ 178
            +  ++    ++  + ++G   +                   ++M+++            
Sbjct: 122 IKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLAL 181

Query: 179 ------MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
                 M  N LP + +T + ++   C+ G V+ A  +FDEM  RG+  DA +Y +++  
Sbjct: 182 TVYTRMMKLNCLPNV-ATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
            CR  RV +A R    M D G   D  T   L+  FC       + +AF LL    + G+
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFC---MLDRVDEAFSLLRLFEKDGY 297

Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
             +V  ++ LI GL +    E    L+ K++  DN KP+V+ YT M+ G  +  K+  A 
Sbjct: 298 VLDVRGYSCLIRGLFRAKRYEDVQLLYRKMI-EDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
            LL  M E G++P+T  Y  LI G C +G    A  L   + +  C PN+  Y+ +I G+
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP-- 470
           C+ G  ++A E+  +  +       +T+  L+    K  + ++A  LF +M + G NP  
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSL 475

Query: 471 ------------DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
                       D  +   ++   C    + ++ +   +   +G  P   TY  ++ G+ 
Sbjct: 476 FLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFC 535

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
           + GN + A K F+ M   G +PD +TYG LI+GL +  + ++A + ++ M   G +P   
Sbjct: 536 KLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAA 595

Query: 579 TRVTLAYEYCKQ 590
              T+    C++
Sbjct: 596 VYRTMMTWMCRR 607



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 215/471 (45%), Gaps = 24/471 (5%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     ++ +++  Y +MG   +A     +M D     D  T  +++     K F   +
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNF---L 177

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
             A  +   M++    PNV T ++LIDGLCK G  + A  LF ++ +     P+  TY  
Sbjct: 178 LLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR-GILPDAFTYCV 236

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +ISG C+ ++++ A  L ++MK+ G+ P+  T  +L+ G C +   + A+ L+ L  K+G
Sbjct: 237 VISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDG 296

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              ++  Y+ +I GL +  R ++   L +K  +  ++ D   YTI++    +  + + AL
Sbjct: 297 YVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            L   M ++G+ PD   Y  LI  FC    + E+     E      FP  +TY+ +I G 
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA-CQFYESMIGKGIS-- 574
            R+G    A + F  M ++GC P  +T+ +LI GLCK  +L++A   FY+  IG+  S  
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476

Query: 575 ------PCEV----TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCS 621
                 P  V    +   +  + C  G    A  IL  L        I T N L+   C 
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536

Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACY----ESNKYALFSDLSQ 668
                 A   F ++  K  + D V+   L N       E + Y +F  + +
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEK 587



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 178/386 (46%), Gaps = 20/386 (5%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           M+   AE G++++   ++ EMT +G+   T   N ++   C++GL+  A  +  E+    
Sbjct: 342 MMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHD 401

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y +++   CR G   +A    + M   G      T   LI   C  G    ++
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTG---QLE 458

Query: 279 QAFELLEEMVRKGWKPNVY-------THTV-------LIDGLCKKGWTEKAFRLFLKLVR 324
           +A  L  +M   G  P+++       +H +       +++ LC  G   KA+R+ ++L  
Sbjct: 459 KAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517

Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
           S +  P ++TY  +++G+CK    N A  L   M+ +GL P+T TY +LI G  +    E
Sbjct: 518 SGD-APGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREE 576

Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
            AY + D M K GCTP+   Y  ++  +C++  +  A+ L  K + R +++ +      +
Sbjct: 577 DAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLK-YLRNIRSQEDEAIKAI 635

Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
             + ++ E ++A+     M     + D+  Y   +   C+ +++ E+ K F       + 
Sbjct: 636 EGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVV 695

Query: 505 PTKETYTSMICGYLRDGNISSAVKYF 530
            T      +I   L++G++  A+  F
Sbjct: 696 ITPPCCVKLIYFLLKEGDLDRAIDVF 721



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/401 (21%), Positives = 163/401 (40%), Gaps = 91/401 (22%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F ++G L E  S+ +E++ +       T + ++   C  GL   A+E+F+EM   G
Sbjct: 377 LIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLG 436

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAM-----------LDRGA--ILDNATLTLLI 265
               A ++  ++   C+ G++ +A      M           L +G   +LD+A+L  ++
Sbjct: 437 CYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMV 496

Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
              CD G    I +A+ +L ++   G  P +YT+ +L++G CK G    A++LF ++ + 
Sbjct: 497 EQLCDSGL---IHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREM-QF 552

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL------------ 373
               P+  TY  +I+G  + ++   A  + ++M++ G  P+   Y ++            
Sbjct: 553 KGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPR 612

Query: 374 ----------------------IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
                                 I G+ +    E+A   +  M  +    ++  Y   + G
Sbjct: 613 AFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIG 672

Query: 412 LCKKGRVQEA-----------------------YELLKKAFQRELQADKITYTI------ 442
           LC+  RV EA                       Y LLK+    +   D   YTI      
Sbjct: 673 LCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEG-DLDRAIDVFLYTIEKGYLL 731

Query: 443 -------LLSEHLK---QAETKQALGLFCRMVKAGLNPDIH 473
                  +L++ ++   +    +A+ L CRM   G + D H
Sbjct: 732 RRRVANRILTKLVRRKGEMGKDRAIYLLCRMKSVGYDLDAH 772


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 227/511 (44%), Gaps = 48/511 (9%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ + F ++ +M        T T   +V    + G ++ A  + ++M  +G      +Y 
Sbjct: 91  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYT 150

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++    + GRV EA R    ML  G   D    T LI+     G    + +A   L +M
Sbjct: 151 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIG---KLDEALVYLNQM 207

Query: 288 VR----KGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
           V     +G +P+V  H ++I  LC  G  E A   F +L   D+      T+  +++  C
Sbjct: 208 VENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL--DDSLDLTHFTFNPLVAALC 265

Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
           K E+   A   +++M E+   P   TYTSL+ G  K+G  + A   +    + G  P+  
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y +IIDGLCK GRV+E  E   +   R  + D +TY  L+   +K     +A  ++ +M
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +++G       Y  ++   C+  ++ E+   F      G   T  TY++++ G+  +GN+
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA---------------------- 561
           S+AV+ F+RM   GC P+ ++Y  +I GLC+  KL +A                      
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 562 ----CQ----------FYESMIGKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKK 606
               CQ           +ESM+ +G SP   +   L    C+ G    T  I  E + + 
Sbjct: 506 LHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRG 565

Query: 607 LWIRTV--NTLIRKLCSEKRVGMAALFFHKL 635
           +    V  NTLIR LC   RV  A   F +L
Sbjct: 566 VAPDVVVFNTLIRWLCIAGRVDEALEVFREL 596



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 205/420 (48%), Gaps = 12/420 (2%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGL-----PLITSTLNRVVGIACELGLVEYAEE 209
           V   ++S  A+IG+L E    + +M  NG      P +    N V+   C  G +E A  
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV-IHNLVIRQLCASGNLEDALA 241

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
            FDE+    +     ++  +V A C+  R  EA  ++  M +R       T T L+  F 
Sbjct: 242 YFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFL 300

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
             G    + +A   L+E V +G+ P+  T+T +IDGLCK G  E+    F ++ R+  Y+
Sbjct: 301 KLG---RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM-RNRGYE 356

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+  TY A+I G+ K + + +A  +  +M + G + +T TY  ++ G CK G    AY  
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
              M + GC   +  Y+A++DG C +G V  A EL ++   R  + + ++Y I++    +
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC-RQKKMKESEKFFQEAITAGLFPTKE 508
             +  +A   F ++++  L PD++ + + +   C R   + +  + F+  ++ G  P   
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLH 536

Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           +Y+ ++ G  R G +   ++ F  M   G APD + +  LI  LC   ++DEA + +  +
Sbjct: 537 SYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 596



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 7/410 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
           G L++  +   E+ ++ L L   T N +V   C+    E A     +M  R       +Y
Sbjct: 234 GNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTY 292

Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +V  + ++GR+ EA   L   ++RG I D  T T +I   C  G    +++  E   E
Sbjct: 293 TSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG---RVEEGCERFHE 349

Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
           M  +G++P+  T+  LIDG  K     KA R++ ++++S      V TY  ++ G CK  
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV-TYNIILDGLCKAG 408

Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
           ++  A      M+E+G +    TY++L+ G C  GN   A +L   M   GC PN+ +YN
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468

Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET-KQALGLFCRMVK 465
            II GLC+ G++ +AY   +K  QR L  D  T+   L    ++ +T    + LF  MV 
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G +P++H+Y+ L+   CR   ++ + + F E ++ G+ P    + ++I      G +  
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           A++ F+ + +   APD  +Y +L+  L +  +++EA      M  +G +P
Sbjct: 589 ALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 223/480 (46%), Gaps = 65/480 (13%)

Query: 247 SAMLDRGAIL--------DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
           +  LDR  +L        D    T++I   C +     + +AF +LE  VR G +P+  T
Sbjct: 22  TGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREK---RLDEAFSVLERAVRAGCEPDYVT 78

Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK--PNVHTYTAMISGYCKEEKMNRAEMLLE 356
           + V IDGLCK    + AF+L  K+   D  K  P   TYTA++ G  K  +++ A  +LE
Sbjct: 79  YNVFIDGLCKAERVDDAFQLLKKM---DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILE 135

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL-MDLMGKEGCTPNIYAYNAIIDGLCKK 415
           +M E+G  P   TYT +I G  K G  E A  + +D++G  GC P+ + Y A+I GL K 
Sbjct: 136 QMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALISGLAKI 194

Query: 416 GRVQEAY----ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
           G++ EA     ++++    R ++ D + + +++ +       + AL  F  +    L+  
Sbjct: 195 GKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLT 253

Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
              +  L+AA C+ ++ +E+  F ++      FPT  TYTS++ G+L+ G +  A+   +
Sbjct: 254 HFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLK 313

Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT------------ 579
              + G  PD +TY ++I GLCK  +++E C+ +  M  +G  P  VT            
Sbjct: 314 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 373

Query: 580 ------RV------------TLAYE-----YCKQGDSATAMIILESLDKKLWIRTVNT-- 614
                 RV            T+ Y       CK G  A A     +++++  + TV T  
Sbjct: 374 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 433

Query: 615 -LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLSQR 669
            L+   CSE  V  A   F ++L +    + VS    +  L  A   +  Y  F  L QR
Sbjct: 434 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 493



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 223/491 (45%), Gaps = 25/491 (5%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFSMVIEMT 180
           Y      L+  G  + A  +++ MV                  ++ GR++E   + ++M 
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 181 NNGLPLITSTLNRVVGIACELGLVE----YAEEVFDEMCARGVCADASSYKLMVVAYCRM 236
            NG          ++    ++G ++    Y  ++ +  CARGV  D   + L++   C  
Sbjct: 174 GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233

Query: 237 GRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNV 296
           G + +A  +    LD    L + T   L+ A C K  R   ++A   +++M  +   P +
Sbjct: 234 GNLEDALAYFDE-LDDSLDLTHFTFNPLVAALC-KAER--TEEAIAFVKKMSERRCFPTL 289

Query: 297 YTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
           +T+T L+DG  K G  ++A  L LK      + P+  TYT++I G CK  ++        
Sbjct: 290 FTYTSLVDGFLKLGRLDEAL-LQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 348

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M+ +G  P+  TY +LI G  K     +A+ +   M + G   +   YN I+DGLCK G
Sbjct: 349 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 408

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           RV EAY       +R   A  +TY+ L+     +     A+ LF RM+  G  P++ +Y 
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL-RDGNISSAVKYFQRMNQ 535
            +I   CR  K+ ++  +F++ +   L P   T+ S + G   R   +   V+ F+ M  
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G +P+  +Y  L+ G+C+   L+   + +  M+ +G++P  V   TL    C  G    
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588

Query: 596 AMIILESLDKK 606
           A+ +   L+++
Sbjct: 589 ALEVFRELERR 599



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 12/358 (3%)

Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
           T L++GLCK G  ++A  L  ++  S    P++  +T +I+G C+E++++ A  +LER  
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCS----PDMVAFTVVINGLCREKRLDEAFSVLERAV 68

Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
             G  P+  TY   I G CK    + A+ L+  M ++ C P    Y A++DGL K GR+ 
Sbjct: 69  RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 128

Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
           EA  +L++  ++       TYT+++    K    ++A  +F  M+  G  PD   YT LI
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188

Query: 480 AAFCRQKKMKESEKFFQEAI----TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
           +   +  K+ E+  +  + +      G+ P    +  +I      GN+  A+ YF  ++ 
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD 248

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
                 + T+  L++ LCK  + +EA  F + M  +   P   T  +L   + K G    
Sbjct: 249 -SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDE 307

Query: 596 AMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           A++ L+   ++ +I    T  ++I  LC   RV      FH++  +    D V+ AAL
Sbjct: 308 ALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 163/334 (48%), Gaps = 6/334 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V  F ++GRL E    + E    G      T   ++   C+LG VE   E F EM  RG
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA +Y  ++  + +   + +A R    ML  G ++   T  +++   C     G + 
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA---GRVA 411

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A+     M  +G    V T++ L+DG C +G    A  LF +++     +PN+ +Y  +
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML-DRGCEPNLVSYNII 470

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC-KVGNFERAYDLMDLMGKEG 397
           I G C+  K+ +A    E++ ++ L P+  T+ S ++G C ++       +L + M  +G
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            +PN+++Y+ ++DG+C+ G ++   E+  +   R +  D + +  L+          +AL
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 590

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
            +F R ++    PD  +Y +L+ A  R ++M+E+
Sbjct: 591 EVF-RELERRSAPDAWSYWSLLDALSRCERMEEA 623



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 9/278 (3%)

Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
           L +T   T+L+ G CK G  +RA  L+D M    C+P++ A+  +I+GLC++ R+ EA+ 
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFC 483
           +L++A +   + D +TY + +    K      A  L  +M +    P    YT L+    
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           +  ++ E+    ++ +  G  PT +TYT +I G  + G +  A + F  M   GC PD  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 544 TYGALISGLCKQSKLDEACQFYESMI----GKGISPCEVTRVTLAYEYCKQGDSATAMII 599
            Y ALISGL K  KLDEA  +   M+     +G+ P  V    +  + C  G+   A+  
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 600 LESLDKKLWIR--TVNTLIRKLCSEKRVGMAALFFHKL 635
            + LD  L +   T N L+  LC  +R   A  F  K+
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 41/303 (13%)

Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
           + N  +E        ++  F +   + +   +  +M  +G  + T T N ++   C+ G 
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 409

Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
           V  A   F  M  RG  A   +Y  ++  +C  G V+ A      MLDRG          
Sbjct: 410 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC--------- 460

Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
                                        +PN+ ++ ++I GLC+ G   KA+  F KL+
Sbjct: 461 -----------------------------EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL 491

Query: 324 RSDNYKPNVHTYTAMISGYCKE-EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
           +     P+V+T+ + + G C+  + +     L E M  QG  PN ++Y+ L+ G C+ G 
Sbjct: 492 QR-RLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 550

Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
            E   ++   M   G  P++  +N +I  LC  GRV EA E+ ++  +R    D  +Y  
Sbjct: 551 LEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWS 609

Query: 443 LLS 445
           LL 
Sbjct: 610 LLD 612


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 4/367 (1%)

Query: 283  LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
            L  +M   G   ++Y+ T+LI   C+      A  L  K+++   ++P++ T  ++++G+
Sbjct: 637  LFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKL-GFQPSIVTLGSLLNGF 695

Query: 343  CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
            C+  +   A  L++ M E GL PN   Y ++I G CK  +   A ++   M K+G   + 
Sbjct: 696  CQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADA 755

Query: 403  YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
              YN +I GLC  GR  +A  LL+   +R++  + I +T L+   +K+    +A  L+  
Sbjct: 756  VTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKE 815

Query: 463  MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
            M++  ++P+I  Y +LI  FC Q ++ +++  F   ++ G FP   TY ++I G+ +   
Sbjct: 816  MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875

Query: 523  ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
            +   +K F  M   G   D  TY  LI G C+  KL+ A + +  M+  G+ P  VT   
Sbjct: 876  VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935

Query: 583  LAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
            L    C  G    A++++E L K    + I T N +I+ +C   +V  A   F  L  K 
Sbjct: 936  LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995

Query: 640  QNVDRVS 646
              +D ++
Sbjct: 996  VKLDAIA 1002



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 4/362 (1%)

Query: 149  FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
            F+ +   +  +++ F +  R +E  S+V  M   GL       N V+   C+   +  A 
Sbjct: 681  FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740

Query: 209  EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            E+F  M  +G+ ADA +Y  ++   C  GR T+A R L  M+ R    +    T LI  F
Sbjct: 741  EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800

Query: 269  CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
              +G   ++ +A  L +EM+R+   PN+ T+  LI+G C +G    A  +F  L+ S   
Sbjct: 801  VKEG---NLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF-DLMVSKGC 856

Query: 329  KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
             P+V TY  +I+G+CK +++     L   M  QGL+ +  TY +LI+G+C+ G    A  
Sbjct: 857  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQK 916

Query: 389  LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
            + + M   G  P+I  YN ++D LC  G++++A  +++   + ++  D ITY I++    
Sbjct: 917  VFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMC 976

Query: 449  KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
            +  + K+A  LF  + + G+  D  AY T+I+  CR    +E++K        G  P++ 
Sbjct: 977  RNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSER 1036

Query: 509  TY 510
             Y
Sbjct: 1037 IY 1038



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 197/451 (43%), Gaps = 44/451 (9%)

Query: 161 SSFAEIGRLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVF--DEMCAR 217
           + F    R ++   + +EM  +  LP +      +  IA    L  Y   ++   +M   
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIA---NLRRYETVIYFSQQMELF 94

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  D  S+ +++  +CR  R++ A   L  M+  G      T   L+  FC    R  I
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC---LRNRI 151

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT----------EKAFRLFLKLVRSDN 327
             AF L+  MV+ G++PNV  +  LID LCK G            EK  RL   LV  + 
Sbjct: 152 HDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNT 211

Query: 328 Y-------------------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
                                      P+V T+TA+I  + K+  ++ A+ L ++M +  
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSS 271

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           + PNT TY SLI G C  G    A    DLM  +GC PN+  YN +I+G CK  RV++  
Sbjct: 272 IGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
           +L ++ ++  L  D  TY  L+  + +  + + A  +F  MV  G+ PDI  +  L+   
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391

Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
           C   ++  +   F +  +   +     Y  MI G  +   +  A + F R+   G  PD 
Sbjct: 392 CVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDA 451

Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGI 573
            TY  +I GLCK     EA + +  M   GI
Sbjct: 452 RTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 195/425 (45%), Gaps = 6/425 (1%)

Query: 168  RLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
            +  + F +  EM  +  +P I     RV+    ++   +    +F +M   G+  D  S+
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVD-FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 227  KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
             +++  +CR  R + A   L  M+  G      TL  L+  FC +G R   ++A  L++ 
Sbjct: 654  TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFC-QGNR--FQEAVSLVDS 710

Query: 287  MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
            M   G +PNV  +  +I+GLCK      A  +F  + +       V TY  +ISG C   
Sbjct: 711  MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV-TYNTLISGLCNSG 769

Query: 347  KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
            +   A  LL  M ++ + PN   +T+LI    K GN   A +L   M +    PNI  YN
Sbjct: 770  RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 407  AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
            ++I+G C +GR+ +A  +      +    D +TY  L++   K    +  + LFC M   
Sbjct: 830  SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889

Query: 467  GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
            GL  D   Y TLI  +C+  K+  ++K F   +  G+ P   TY  ++     +G I  A
Sbjct: 890  GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949

Query: 527  VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
            +   + + +     D ITY  +I G+C+  K+ EA   + S+  KG+    +  +T+   
Sbjct: 950  LVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISG 1009

Query: 587  YCKQG 591
             C+ G
Sbjct: 1010 LCRNG 1014



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 170/351 (48%), Gaps = 5/351 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    R+ + FS+V  M  +G        N ++   C+ G V  A E+ +EM  +G
Sbjct: 141 LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200

Query: 219 -VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
            + AD  +Y  ++   C  G   +A R L  M  R    D  T T LI AF  +G   ++
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG---NL 257

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A EL ++M++    PN  T+  LI+GLC  G    A + F  L+ S    PNV TY  
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF-DLMASKGCFPNVVTYNT 316

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G+CK  ++     L +RM  +GL+ +T TY +LI+G+C+VG    A D+   M   G
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
            TP+I  +  ++ GLC  G +  A          E     + Y I++    K  + ++A 
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
            LFCR+   G+ PD   YT +I   C+    +E+++ F+     G+    E
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE 487



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 177/355 (49%), Gaps = 5/355 (1%)

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           ++M   G   ++Y+ T+LI   C+      A  +  K+++   Y P++ T+ +++ G+C 
Sbjct: 89  QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKL-GYDPSIVTFGSLLHGFCL 147

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIY 403
             +++ A  L+  M + G  PN   Y +LI   CK G+   A +L++ M K+G    ++ 
Sbjct: 148 RNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV 207

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            YN ++ GLC  G  ++A  +L+   +R +  D  T+T L+   +KQ    +A  L+ +M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +++ + P+   Y +LI   C   ++  ++K F    + G FP   TY ++I G+ +   +
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
              +K FQRM + G   D  TY  LI G C+  KL  A   +  M+  G++P  +T   L
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387

Query: 584 AYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +  C  G+  +AM+    +   +K L I   N +I  LC   +V  A   F +L
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRL 442



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 173/387 (44%), Gaps = 4/387 (1%)

Query: 159  MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
            ++  F    R     +++ +M   G      TL  ++   C+    + A  + D M   G
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 219  VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
            +  +   Y  ++   C+   +  A      M  +G + D  T   LI+  C+ G      
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG---RWT 772

Query: 279  QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
             A  LL +MV++   PNV   T LID   K+G   +A  L+ +++R  +  PN+ TY ++
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR-SVHPNILTYNSL 831

Query: 339  ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
            I+G+C + ++  A+ + + M  +G  P+  TY +LI G CK    E    L   M  +G 
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 399  TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
              + + YN +I G C+ G++  A ++  +     +  D +TY ILL       + ++AL 
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 459  LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
            +   + K  ++ DI  Y  +I   CR  K+KE+   F+     G+      Y +MI G  
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011

Query: 519  RDGNISSAVKYFQRMNQIGCAPDNITY 545
            R+G    A K   RM + G  P    Y
Sbjct: 1012 RNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 172/380 (45%), Gaps = 5/380 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F    RL    S++ +M   G      T   ++   C    +  A  +   M   G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL-DNATLTLLITAFCDKGFRGSI 277
              +   Y  ++   C+ G V  A   L+ M  +G +  D  T   L+T  C   + G  
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC---YSGEW 222

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +QA  +L +M ++   P+V+T T LID   K+G  ++A  L+ ++++S +  PN  TY +
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS-SIGPNTVTYNS 281

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           +I+G C   ++  A+   + M  +G  PN  TY +LI G CK    E    L   M +EG
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              + + YN +I G C+ G+++ A ++        +  D IT+ ILL       E   A+
Sbjct: 342 LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM 401

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
             F  M        I AY  +I   C+  K++E+ + F      G+ P   TYT MI G 
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGL 461

Query: 518 LRDGNISSAVKYFQRMNQIG 537
            ++G    A + F+RM + G
Sbjct: 462 CKNGPRREADELFRRMKEDG 481



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 222/554 (40%), Gaps = 66/554 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +F + G L E   +  +M  + +   T T N ++   C  G + +A++ FD M ++G
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              +  +Y  ++  +C+  RV +  +    M   G + D  T   LI  +C  G    ++
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG---KLR 363

Query: 279 QAFELLEEMVRKGWKPNVYTHTVL-----------------------------------I 303
            A ++   MV  G  P++ TH +L                                   I
Sbjct: 364 VAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMI 423

Query: 304 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL 363
            GLCK    E+A+ LF +L   +  KP+  TYT MI G CK      A+ L  RMKE G+
Sbjct: 424 HGLCKADKVEEAWELFCRL-PVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482

Query: 364 L----------PNTNTYTSL---IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           +            TN   SL   I    +  +   + DL           ++     I  
Sbjct: 483 ICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIAS 542

Query: 411 GLCKKGRVQEAYELLKKAFQRELQA-----------DKITYTILLSEHLKQAETKQALGL 459
               KG V+    LL++    E ++               Y   L   L   +   A GL
Sbjct: 543 SSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGL 602

Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
           FC M+++   P I  +T ++ A  +  K       F +    G+     ++T +I  + R
Sbjct: 603 FCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCR 662

Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
               S A+    +M ++G  P  +T G+L++G C+ ++  EA    +SM   G+ P  V 
Sbjct: 663 CSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVI 722

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
             T+    CK  D   A+ I   ++KK  +    T NTLI  LC+  R   AA     ++
Sbjct: 723 YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782

Query: 637 GKDQNVDRVSLAAL 650
            +  + + +   AL
Sbjct: 783 KRKIDPNVIFFTAL 796



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 188/466 (40%), Gaps = 40/466 (8%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD- 257
           C+   VE A E+F  +   GV  DA +Y +M++  C+ G   EAD     M + G I   
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486

Query: 258 ----------NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
                     N  ++L     C K  R SI ++ +L           ++     +     
Sbjct: 487 EDGHLGEHGTNNQVSLGTIIICPKR-RRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSS 545

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
            KG+     R  L L R +N  P   ++    SG       +      ER++ +      
Sbjct: 546 VKGFVR---RHLLLLERGNN--PESRSF----SGASHHHHHHHHHHYRERLRSEL----- 591

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
                    HC    F+ A+ L   M +    P+I  +  ++  + K  +      L  K
Sbjct: 592 ---------HCI--KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHK 640

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                +  D  ++TIL+    + +    AL L  +M+K G  P I    +L+  FC+  +
Sbjct: 641 MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
            +E+          GL P    Y ++I G  ++ ++++A++ F  M + G   D +TY  
Sbjct: 701 FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           LISGLC   +  +A +    M+ + I P  +    L   + K+G+   A  + + + ++ 
Sbjct: 761 LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 608 W---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
               I T N+LI   C + R+G A   F  ++ K    D V+   L
Sbjct: 821 VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 132/327 (40%), Gaps = 40/327 (12%)

Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
           E A  LFL++V+S    P+V  +T +++      +        ++M+  G+  +  ++T 
Sbjct: 47  EDALDLFLEMVQSQPL-PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105

Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
           LI+  C+      A  ++  M K G  P+I  + +++ G C + R+ +A+ L+       
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVAS----- 160

Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
                                         MVK+G  P++  Y TLI   C+   +  + 
Sbjct: 161 ------------------------------MVKSGYEPNVVVYNTLIDCLCKNGDVNIAL 190

Query: 493 KFFQEAITAG-LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
           +   E    G L     TY +++ G    G    A +  + M +    PD  T+ ALI  
Sbjct: 191 ELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDA 250

Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW--- 608
             KQ  LDEA + Y+ M+   I P  VT  +L    C  G    A    + +  K     
Sbjct: 251 FVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPN 310

Query: 609 IRTVNTLIRKLCSEKRVGMAALFFHKL 635
           + T NTLI   C  +RV      F ++
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRM 337



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 4/210 (1%)

Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
           L     + AL LF  MV++   P +  +T L+ A    ++ +    F Q+    G+    
Sbjct: 41  LHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDL 100

Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
            ++T +I  + R   +S A+    +M ++G  P  +T+G+L+ G C ++++ +A     S
Sbjct: 101 YSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVAS 160

Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEK 623
           M+  G  P  V   TL    CK GD   A+ +L  ++KK  +     T NTL+  LC   
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220

Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
               AA     +  +  N D  +  AL +A
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDA 250



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 3/154 (1%)

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L   F    + +++   F E + +   P+   +T ++          + + + Q+M   G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
            + D  ++  LI   C+ S+L  A      M+  G  P  VT  +L + +C +     A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 598 IILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
            ++ S+ K  +   +   NTLI  LC    V +A
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIA 189


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 5/362 (1%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R+    EA  +   +LD G   +     +L+  F   G   S ++ F+   EM R+  +P
Sbjct: 163 RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFD---EM-RRSVQP 218

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
            V T   LI G+C+    +    L+ K +     KP+V+TY A+I G+C+  +M  A  +
Sbjct: 219 TVVTFNTLISGMCRARDLDAVDGLY-KEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
              M++ G+ PN   +T+LI  HCK GN     DL   M   G  P++ AYNA+++GLC+
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCR 337

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
              ++ A  ++++     L+ DK+TYT L+    K  +   A+ +  +M +  ++ D   
Sbjct: 338 ARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVT 397

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YT LI+   +  +  ++E+  +E + A L P   TYT +I  + R G++ +  K  + M 
Sbjct: 398 YTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
             G  P  +TY  +++GLCK  ++  A     +M+  G+SP ++T   L    CK G  A
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVA 517

Query: 595 TA 596
            +
Sbjct: 518 NS 519



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 179/385 (46%), Gaps = 8/385 (2%)

Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
           E ++  +++ + G+   T   N ++     LG +  A +VFDEM  R V     ++  ++
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLI 227

Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
              CR   +   D     M D G   D  T   LI  FC     G ++ A ++  EM   
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRT---GRMENAVKMFNEMRDT 284

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G  PN    T LID  CK+G       L+  + R     P++  Y A+++G C+   +  
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM-RVRGVMPDLVAYNALVNGLCRARNLKA 343

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           AE ++E MK  GL P+  TYT+LI G CK G  + A D+   M ++  + +   Y A+I 
Sbjct: 344 AESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALIS 403

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GL K GR  +A  +L++  +  L+ D  TYT+++    ++ + K    L   M   G  P
Sbjct: 404 GLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP 463

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
            +  Y  ++   C+  +MK ++      +  G+ P   TY  ++ G  + G ++++ +  
Sbjct: 464 GVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL- 522

Query: 531 QRMNQIGCAPDNITYGALISGLCKQ 555
              +  G  PD   Y +LIS L K+
Sbjct: 523 --ESSKGMVPDFAVYTSLISELAKK 545



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 163/367 (44%), Gaps = 37/367 (10%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +   ++  F  +G L     +  EM  +  P +  T N ++   C    ++  + ++ EM
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVV-TFNTLISGMCRARDLDAVDGLYKEM 246

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-- 272
              GV  D  +Y  ++  +CR GR+  A +  + M D G   +    T LI A C +G  
Sbjct: 247 SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNV 306

Query: 273 -----------FRG-------------------SIKQAFELLEEMVRKGWKPNVYTHTVL 302
                       RG                   ++K A  ++EEM   G KP+  T+T L
Sbjct: 307 NAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTL 366

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           IDG CK G  + A  +  K+   +     V TYTA+ISG  K  +   AE +L  M E  
Sbjct: 367 IDGCCKDGKLDMAMDIKQKMAEKEVSLDEV-TYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
           L P+  TYT +I   C+ G+ +  + L+  M  +G  P +  YN I++GLCK G+++ A 
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
            LL       +  D ITY ILL    K  +   +  L       G+ PD   YT+LI+  
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISEL 542

Query: 483 CRQKKMK 489
            ++K  K
Sbjct: 543 AKKKPAK 549



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 33/254 (12%)

Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
           G  P    +N ++    + G +  A ++  +  +R +Q   +T+  L+S   +  +    
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
            GL+  M   G+ PD++ Y  LI  FCR  +M+ + K F E    G+ P    +T++I  
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
           + ++GN+++ +  +Q M   G  PD + Y AL++GLC+   L  A    E M   G+ P 
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
           +VT                                  TLI   C + ++ MA     K+ 
Sbjct: 360 KVT--------------------------------YTTLIDGCCKDGKLDMAMDIKQKMA 387

Query: 637 GKDQNVDRVSLAAL 650
            K+ ++D V+  AL
Sbjct: 388 EKEVSLDEVTYTAL 401



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 15/265 (5%)

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
           +G + +A  L+  A +R +       + L+S   +   T +A   + +++ AG+ P+   
Sbjct: 132 EGLLPDACSLVLLALRRGISLPAPVCSGLMS---RLPSTPEAYTFYLQLLDAGMAPETRL 188

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           +  L+  F R  ++  + K F E +   + PT  T+ ++I G  R  ++ +    ++ M+
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMS 247

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
            +G  PD  TYGALI G C+  +++ A + +  M   G++P  V   TL   +CK+G+  
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVN 307

Query: 595 TAMIILESLDKKLWIRTV-------NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSL 647
             M     L + + +R V       N L+  LC  + +  A     ++       D+V+ 
Sbjct: 308 AGM----DLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTY 363

Query: 648 AALKNACYESNKYALFSDLSQRIAE 672
             L + C +  K  +  D+ Q++AE
Sbjct: 364 TTLIDGCCKDGKLDMAMDIKQKMAE 388


>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 200/410 (48%), Gaps = 12/410 (2%)

Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
           R+ EGF ++  + NNG+   T   N ++   C  G V  A  + +EM    V  +  ++ 
Sbjct: 192 RIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFN 247

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++ +Y +   + +A   L        + D  T+T ++   C+ G    + +A E+LE +
Sbjct: 248 ILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAG---RVTEAAEVLERV 304

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
              G   +   +  LI G C  G  +     FLK + +  Y PNV TY  +I G+C+   
Sbjct: 305 ESLGGSLDAVAYNTLIKGFCGVGKVKVGLH-FLKQMENKGYLPNVDTYNILIYGFCESRM 363

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM--GKEGCTPNIYAY 405
           ++ A  L   MK  G+  N  T+ ++I G C  G  E  + +++LM   KEG   +I  Y
Sbjct: 364 LDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPY 423

Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
           N+II GL K+ R  EA E L K  +   +A   + TI+  +  K+   + A  ++ +M+ 
Sbjct: 424 NSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTII--QKCKEGAIEDAKNIYDKMID 481

Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
            G  P I  Y +L+  F +   ++E+ +   E I+   FP   T+ ++I  +   G I S
Sbjct: 482 EGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIES 541

Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           A+K+ + +   GC P+  TY  LI  LC++  + +A Q +  M+ KGI P
Sbjct: 542 ALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILP 591



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 8/320 (2%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T+ +VV I C  G V  A EV + + + G   DA +Y  ++  +C +G+V     +L  M
Sbjct: 280 TVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQM 339

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
            ++G + +  T  +LI  FC+      +  A +L  +M   G   N  T   +I GLC +
Sbjct: 340 ENKGYLPNVDTYNILIYGFCESRM---LDLALDLFNDMKTDGINRNFVTFDTMIRGLCSE 396

Query: 310 GWTEKAFRLFLKLVRS--DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           G  E  F + L+L+    +  K ++  Y ++I G  K+ + + A   L +M +  L P  
Sbjct: 397 GRIEDGFSI-LELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGK--LFPRA 453

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
              +  I   CK G  E A ++ D M  EG  P+I  YN+++ G  + G ++EA EL+ +
Sbjct: 454 VDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINE 513

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
                      T+  +++E  +Q + + AL     +   G  P+   Y+ LI   CR+  
Sbjct: 514 MISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGD 573

Query: 488 MKESEKFFQEAITAGLFPTK 507
           ++++ + F E +  G+ P +
Sbjct: 574 IQKALQVFLEMVEKGILPDQ 593



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 14/371 (3%)

Query: 282 ELLEEM-VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
           +LL+EM    G  P       ++ GL + G T +   + L L    +  P++  + +++ 
Sbjct: 92  QLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITV-LDLAYKFHGTPSLKIFNSILD 150

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
              KE+     E   + M E G+  +  T+  L+ G C        + L+ L+   G TP
Sbjct: 151 VLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTP 210

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           N   YN ++  LC+ G+V  A  L+ +     +  +++T+ IL+S + K+    QAL L 
Sbjct: 211 NTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLL 266

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
            +     L PD+   T ++   C   ++ E+ +  +   + G       Y ++I G+   
Sbjct: 267 EKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGV 326

Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
           G +   + + ++M   G  P+  TY  LI G C+   LD A   +  M   GI+   VT 
Sbjct: 327 GKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTF 386

Query: 581 VTLAYEYCKQGDSATAMIILESLDK-----KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            T+    C +G       ILE +++     K  I   N++I  L  + R   A+ F  K 
Sbjct: 387 DTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAK- 445

Query: 636 LGK--DQNVDR 644
           +GK   + VDR
Sbjct: 446 MGKLFPRAVDR 456



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 125/314 (39%), Gaps = 41/314 (13%)

Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
           TY  +I   C   + +  + LL+ M    G  P  + + +++ G  + G   R   ++DL
Sbjct: 73  TYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDL 132

Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE-LQADKITYTILLSEHLKQA 451
             K   TP++  +N+I+D L K+  +  A E  +K+     ++ D  T+ IL+       
Sbjct: 133 AYKFHGTPSLKIFNSILDVLVKED-IDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTN 191

Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
              +   L   +   G+ P+   Y TL+ A CR  K+  +     E +     P + T+ 
Sbjct: 192 RIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVD----PNEVTFN 247

Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
            +I  Y ++ N+  A+   ++   +   PD +T   ++  LC   ++ EA +  E     
Sbjct: 248 ILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLER---- 303

Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALF 631
                                       +ESL   L     NTLI+  C   +V +   F
Sbjct: 304 ----------------------------VESLGGSLDAVAYNTLIKGFCGVGKVKVGLHF 335

Query: 632 FHKLLGKD--QNVD 643
             ++  K    NVD
Sbjct: 336 LKQMENKGYLPNVD 349



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 8/245 (3%)

Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMV--IEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           R       M+      GR+++GFS++  +E T  G     S  N ++    +    + A 
Sbjct: 381 RNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEAS 440

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
           E   +M    +   A    + ++  C+ G + +A      M+D G I        L+  F
Sbjct: 441 EFLAKMGK--LFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGF 498

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
                 GSI++A EL+ EM+     P   T   +I   C++G  E A + F++ + +   
Sbjct: 499 SQ---HGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALK-FMEDITARGC 554

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            PN  TY+ +I   C++  + +A  +   M E+G+LP+   + SL+       NF +   
Sbjct: 555 VPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIWKSLLLSLSLQNNFNKNVS 614

Query: 389 LMDLM 393
            +D +
Sbjct: 615 NIDYL 619


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 220/481 (45%), Gaps = 21/481 (4%)

Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
           ++  A  LI N + +         +  F + G   +GF  +  M        + T N +V
Sbjct: 61  HLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASS--------YKLMVVAYCRMGRVTEADRWLS 247
              C +G V+Y E V D +       D ++        Y  ++ AYC+   ++EA     
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
            M+  G + D  T + +I   C    RG + +A  LL EM + G  PN   + +L+D L 
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCK---RGMLTEAKALLREMDKMGVNPNHVVYAILVDSLF 237

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G   ++F    +++       ++   T +I G  K  K + AE +   + +   +PN 
Sbjct: 238 KAGSAWESFIYQSQMIVC-GVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNN 296

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TYT++I G+CK+G+ + A  L+  M K+   PN+  Y++II+G  KKG +  A  ++KK
Sbjct: 297 ITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
              + +  +   Y  L+  HLK  +   A+ L+  M   GL  +       I    R +K
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRK 416

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           M+E+E   +  ++ GL   +  YTS++ G+ + G  S+A    ++M + G   D + Y  
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNV 476

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
           LI+GL +  K D A   Y  +   G++P   T  T+   YCKQG    A+        KL
Sbjct: 477 LINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAI--------KL 527

Query: 608 W 608
           W
Sbjct: 528 W 528



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 17/397 (4%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
           LPL     NR++      GLV    +++ EM + GV  +  ++ ++V A+C+MG ++ A 
Sbjct: 11  LPL----WNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLA- 65

Query: 244 RWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI 303
             L  + +    +D  T    I  FC +G      Q F  L  MV+K    + +T  +L+
Sbjct: 66  --LDLIRNVDIDVDTVTYNTAIWGFCQQGLA---NQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 304 DGLCKKGWTEKAFRLFLKLVR-------SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLE 356
            G C+ G  +    +   L+        + N +PN+ TYT +IS YCK+  ++ A  L E
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 357 RMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
            M   G LP+  TY+S+I G CK G    A  L+  M K G  PN   Y  ++D L K G
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
              E++    +     +  D +  T L+    K  ++ +A  +FC + K    P+   YT
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            +I  +C+   M  +E   ++     + P   TY+S+I GY + G +  AV+  ++M   
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQ 360

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
              P+   Y  LI G  K  K D A   Y  M   G+
Sbjct: 361 NIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGL 397



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 201/460 (43%), Gaps = 52/460 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  F + GR    F+M  +M   G+       N ++     LG  + AE V+  +   G
Sbjct: 442 LMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELG 500

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D ++Y  M+ AYC+ G++  A +  + M     + ++ T  +L+      G     +
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAG---ETE 557

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A ++L EM+  G  PNV  H  L++   K    +   ++  +LV     K N   Y ++
Sbjct: 558 RAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGM-GLKANREVYNSL 616

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I+  C      RA ++L  M ++G+  +T TY +LI+GH K  + E+A      M  EG 
Sbjct: 617 ITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGV 676

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
           +P I  YN ++ GL   G + +AYE+L K                               
Sbjct: 677 SPGIRTYNLLLGGLLAAGLMSKAYEILSK------------------------------- 705

Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
               M  +GL+PD   Y TLI+   +    KE+ KF+ E +T GL P   TY  +I  + 
Sbjct: 706 ----MKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFA 761

Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC---KQSKLD---------EACQFYE 566
           + G +  A +    M      P++ TY  LI G C   KQ +LD         EA   + 
Sbjct: 762 KVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFA 821

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
            M  KG  PCE T   ++  + + G    A  +L+ + K+
Sbjct: 822 EMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 16/324 (4%)

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PNV T+  ++  +CK   M    + L+ ++   +  +T TY + I+G C+ G   + +  
Sbjct: 44  PNVFTHNILVHAWCK---MGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGF 100

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR--------ELQADKITYT 441
           + +M K+    + +  N ++ G C+ G V+    ++               L+ + +TYT
Sbjct: 101 LSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYT 160

Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
            L+S + KQ    +AL L+  M+  G  PD+  Y+++I   C++  + E++   +E    
Sbjct: 161 TLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKM 220

Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           G+ P    Y  ++    + G+   +  Y  +M   G + D +    LI GL K  K DEA
Sbjct: 221 GVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEA 280

Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRK 618
              + ++      P  +T   +   YCK GD   A  +L  ++KK  +  V T   +I  
Sbjct: 281 EAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIING 340

Query: 619 LCSEKRVGMAALFFHKLLGKDQNV 642
              +  + +A     K+L  DQN+
Sbjct: 341 YTKKGMLDVAVRIMKKML--DQNI 362



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 11/249 (4%)

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
           ++   ++P    +  LIY     G   + +DL   M   G  PN++ +N ++   CK G 
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           +  A +L++     ++  D +TY   +    +Q    Q  G    MVK     D      
Sbjct: 62  LSLALDLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 478 LIAAFCRQKKMKESEKFFQEAI--------TAGLFPTKETYTSMICGYLRDGNISSAVKY 529
           L+  FCR   +K  E      I        T  L P   TYT++I  Y +   +S A+  
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
           ++ M   G  PD +TY ++I+GLCK+  L EA      M   G++P  V    L     K
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 590 QGDSATAMI 598
            G +  + I
Sbjct: 239 AGSAWESFI 247



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 16/262 (6%)

Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
           GL       N ++ + C LG+ + A  V + M   G+ AD  +Y  ++  + +   + +A
Sbjct: 605 GLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKA 664

Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
               + ML+ G    +  +             G + +A+E+L +M   G  P+   +  L
Sbjct: 665 LATYTQMLNEGV---SPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTL 721

Query: 303 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
           I G  K G  ++A + + ++V +    P   TY  +I  + K  KM++A  LL  M+ + 
Sbjct: 722 ISGHGKIGNKKEAIKFYCEMV-TKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRR 780

Query: 363 LLPNTNTYTSLIYGHCKVGN---FER---------AYDLMDLMGKEGCTPNIYAYNAIID 410
           + PN++TY  LI G C +      +R         A  L   M ++G  P       I  
Sbjct: 781 VPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISS 840

Query: 411 GLCKKGRVQEAYELLKKAFQRE 432
              + G V +A  +LK  ++R+
Sbjct: 841 TFARPGMVVDAKHMLKDMYKRK 862



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
           EV   +++    +G  K    ++  MT  G+   T T N ++    +   +E A   + +
Sbjct: 611 EVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQ 670

Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
           M   GV     +Y L++      G +++A   LS M D G   D +    LI+     G 
Sbjct: 671 MLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISG---HGK 727

Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
            G+ K+A +   EMV KG  P   T+ VLI+   K G  ++A R  L  ++     PN  
Sbjct: 728 IGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQA-RELLNEMQVRRVPPNSS 786

Query: 334 TYTAMISGYC---KEEKMNR---------AEMLLERMKEQGLLPNTNT 369
           TY  +I G+C   K+ +++R         A  L   M E+G +P  NT
Sbjct: 787 TYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENT 834


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 191/401 (47%), Gaps = 6/401 (1%)

Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC-ELGLVEYAEEVFDEMCARGVCADASS 225
           GR ++   +  +MT+    L  +     V  +C   GL++ A  +  +    G   +  +
Sbjct: 125 GRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYA 184

Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFRGSIKQAFELL 284
           Y  ++      GR  +A     + +  G    D  +  ++I   C  G   + ++A EL+
Sbjct: 185 YNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVG---NFQKALELV 241

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
           E M   G  P+  TH +L+DGLC+     +   L  +L R     PNV TYT++ISGYCK
Sbjct: 242 ERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCK 301

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
             +M  A  +   M E G  PNT TY  LI G+ K  + E A  +   +    C P++  
Sbjct: 302 AGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVT 361

Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM- 463
           ++++IDG C+ G++ +A  + K+  Q  +Q +  T++I++    KQ  + +ALG    + 
Sbjct: 362 FSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELN 421

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           ++A + P    Y  +I   C+  +++E+     +    G  P K TYT +I G+   G I
Sbjct: 422 MRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRI 481

Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
             A+  F +M + GC PD IT  + IS + K    +E  Q 
Sbjct: 482 PEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQI 522



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 193/404 (47%), Gaps = 16/404 (3%)

Query: 184 LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR-GVCADASSYKLMVVAYCRMGRVTEA 242
           +P    + + V+ + C  G    A ++FD+M  + G   DA  +  +  +    G +  A
Sbjct: 107 VPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAA 166

Query: 243 DRWLSAMLDRGAILD----NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG-WKPNVY 297
              L+     G  ++    N  L LLI        RG  + A  L E  ++ G + P+ +
Sbjct: 167 VTLLTKASQFGRRIEPYAYNNLLNLLIA-------RGRAQDAVALFESWIQDGLYSPDGW 219

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
           +  V+I G+C+ G  +KA  L  ++       P+  T+  ++ G C+ +++NR   LL R
Sbjct: 220 SFNVVIKGVCRVGNFQKALELVERMTEF-GCSPDTITHNILVDGLCRAKQVNRGHDLLRR 278

Query: 358 MKEQGL-LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
           ++  G+ +PN  TYTS+I G+CK G  E A  + + M + G  PN   YN +I+G  K  
Sbjct: 279 LQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKAL 338

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
            ++ A  + ++   R    D +T++ L+  + +  +   A+ ++  M +  + P+++ ++
Sbjct: 339 DMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFS 398

Query: 477 TLIAAFCRQKKMKESEKFFQE-AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
            +I + C+Q +  E+  F +E  + A + P    Y  +I    + G +  A      M +
Sbjct: 399 IIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEE 458

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
            GC PD  TY  LI G C + ++ EA   +  M+  G  P ++T
Sbjct: 459 KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKIT 502



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 182/381 (47%), Gaps = 4/381 (1%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           SY  ++   CR GR  +A +    M D+   L +A     +   C     G +  A  LL
Sbjct: 113 SYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNA--GLLDAAVTLL 170

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
            +  + G +   Y +  L++ L  +G  + A  LF   ++   Y P+  ++  +I G C+
Sbjct: 171 TKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCR 230

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG-CTPNIY 403
                +A  L+ERM E G  P+T T+  L+ G C+     R +DL+  + ++G C PN+ 
Sbjct: 231 VGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVV 290

Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
            Y ++I G CK GR+++A  +     +   + + +TY +L++ + K  + + A+ ++ ++
Sbjct: 291 TYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQL 350

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNI 523
           +     PD+  +++LI  +CR  ++ ++ + ++E     + P   T++ +I    +    
Sbjct: 351 ILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRS 410

Query: 524 SSAVKYFQRMN-QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
           + A+ + + +N +   AP    Y  +I  LCK  +++EA      M  KG  P + T   
Sbjct: 411 AEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTI 470

Query: 583 LAYEYCKQGDSATAMIILESL 603
           L   +C +G    A+ +   +
Sbjct: 471 LIIGHCMKGRIPEAITLFHKM 491



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 147 GNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMTNNG--LPLITS 189
           GNF++A E+++ M               V       ++  G  ++  +  +G  +P +  
Sbjct: 232 GNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVV- 290

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           T   V+   C+ G +E A  V+++M   G   +  +Y +++  Y +   +  A R    +
Sbjct: 291 TYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQL 350

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
           + R    D  T + LI  +C  G    +  A  + +EM +   +PNVYT +++I  LCK+
Sbjct: 351 ILRRCPPDVVTFSSLIDGYCRCG---QLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQ 407

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
             + +A     +L    +  P    Y  +I   CK  ++  A +++  M+E+G  P+  T
Sbjct: 408 NRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYT 467

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
           YT LI GHC  G    A  L   M + GC P+    N+ I  + K G   E  +++
Sbjct: 468 YTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 1/310 (0%)

Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
           P+  T+  +++ LCK    + A     ++  +   KP+   Y  ++SG C+EEK+  A +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMA-TRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           L E+M +Q + PN  TY +LI G CK    E AY+L   M  +G  P   +YN +IDG C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           KK  +  A ++  K  +     + +TYT L+    K  + + A  +   MVK G+ P++ 
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
            Y+ LI  FC+ +++ E+ K  ++ +T G+ PT  TY  ++    R   +  A K F+ M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
            Q  C P  +TY  L+  LC   +LD A + Y  MI KG  P  +T  TLA+   + G  
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 594 ATAMIILESL 603
             A  ++E +
Sbjct: 306 HEAQELMEKM 315



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 156/313 (49%), Gaps = 4/313 (1%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           P    T   +V   C+   ++ A    +EM  RG+  DA  Y  ++   C+  +V EA  
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
               M+ +    +  T   LI   C K +R  I+ A+EL +EM  KG+ P   ++  LID
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLC-KAWR--IETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           G CKK     A  +F K+VRS N  PNV TYT +I G  K  K+  A  +L+ M ++G+ 
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 181

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           PN  TY+ LI G CKV   + A+ L++ M  +G  P +  YN +++ LC+  ++++A++L
Sbjct: 182 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 241

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +   QR      +TY  LL       +   A  L+  M+  G  PD   Y TL     R
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 301

Query: 485 QKKMKESEKFFQE 497
             K+ E+++  ++
Sbjct: 302 AGKVHEAQELMEK 314



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 3/289 (1%)

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P+  TY  ++   CK    + A   ++ M   G  P+ + YN ++ GLC++ +V+EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
            +K  ++ +  + +TY  L++   K    + A  LF  M   G  P   +Y TLI  FC+
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
           +K +  ++  F + + +   P   TYT++I G  + G + +A +    M + G  P+  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
           Y  LI G CK  ++DEA +  E M+ +GI+P  VT   L    C+      A  +   + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 605 KKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
           ++    TV   NTL+R LC  K++  A   + +++ K    D ++   L
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 4/312 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    +  R+ +  + V EM   G+       N V+   C+   VE A  +F++M  + 
Sbjct: 15  IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  +  +Y  ++   C+  R+  A      M  +G +    +   LI  FC K     + 
Sbjct: 75  INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK---DLV 131

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
            A ++ ++MVR    PNV T+T LIDGL K G  + A  +   +V+     PNV TY+ +
Sbjct: 132 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCL 190

Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
           I G+CK  +++ A  LLE+M  QG+ P   TY  L+   C+    E A+ L   M +  C
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250

Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
            P +  YN ++  LC   ++  A+ L  +   +    D ITY  L     +  +  +A  
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 310

Query: 459 LFCRMVKAGLNP 470
           L  +M     NP
Sbjct: 311 LMEKMKLTKRNP 322


>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 376

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 189/381 (49%), Gaps = 5/381 (1%)

Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
           CE G ++ AE V+ E+    V  DA  Y  M+  Y R+ ++ +       M   G     
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSV 59

Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
           ++  +++    D G    +   +EL++E    G+  +  T+ +L+ G CK G+ +K+  +
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKE---SGFVEDSITYGILVHGFCKNGYIDKSLHV 116

Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
            L++        +   Y+AMI+G CKE  ++RA  +L  M + G  PN + Y +LI G  
Sbjct: 117 -LEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLA 175

Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
               FE A  +   MG   C+P I  YN +I+GLCK     EAY L+K+   + L    I
Sbjct: 176 GASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVI 235

Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
           TY++L+       + ++AL L+ +++  G  PD+  +  LI   C   KM+ +   + + 
Sbjct: 236 TYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM 295

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
                 P   ++ +++ G+ +DG+I +A+  + R+ + G  PD I+Y   + GLC  +++
Sbjct: 296 NRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRI 355

Query: 559 DEACQFYESMIGKGISPCEVT 579
            +A  F    + K I P ++T
Sbjct: 356 SDAILFLHDAVTKKIVPTKIT 376



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 179/355 (50%), Gaps = 5/355 (1%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           V   M++ +  + ++K+ F +   M + G   ++S  N ++    + G V+    +++ M
Sbjct: 27  VYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSS-FNIMMRGLFDNGKVDEVISIWELM 85

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              G   D+ +Y ++V  +C+ G + ++   L     +G +LD    + +I   C +   
Sbjct: 86  KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEA-- 143

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            ++ +A  +L  M++ G KPNV+ +  LI+GL      E A R+F ++  + +  P + T
Sbjct: 144 -NLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREM-GTMHCSPTIIT 201

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y  +I+G CK E    A  L++ + ++GL P   TY+ L+ G C     ERA  L + + 
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVI 261

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
            +G  P++  +N +I GLC  G++Q A  L     + +   + +++  L+    K  + +
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
            AL ++ R+++ GL PDI +Y   +   C   ++ ++  F  +A+T  + PTK T
Sbjct: 322 NALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTKIT 376



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G I  A  + +E+V     P+   +  +++G  +    +  F L+  +    N   +V +
Sbjct: 4   GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN--RSVSS 61

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  M+ G     K++    + E MKE G + ++ TY  L++G CK G  +++  ++++  
Sbjct: 62  FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 121

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           ++G   + +AY+A+I+GLCK+  +  A  +L    +   + +   Y  L++     ++ +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A+ +F  M     +P I  Y TLI   C+ +   E+    +E +  GL P   TY+ ++
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLM 241

Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
            G   D  +  A++ + ++   G  PD   +  LI GLC   K+  A   Y  M     +
Sbjct: 242 KGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCA 301

Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALF 631
           P  V+  TL   + K GD   A++I   + +      I + N  ++ LCS  R+  A LF
Sbjct: 302 PNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILF 361

Query: 632 FHKLLGK 638
            H  + K
Sbjct: 362 LHDAVTK 368



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 5/265 (1%)

Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
           C+ G +  A  + K+  + ++  D + Y  +L+ + + A+ K    L+  M   G N  +
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
            ++  ++       K+ E    ++    +G      TY  ++ G+ ++G I  ++   + 
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
             Q G   D   Y A+I+GLCK++ LD A      MI  G  P      TL         
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 593 SATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
              A+ +   +        I T NTLI  LC  +  G A     +LL K  +   ++ + 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 650 L-KNACYESNKYALFSDLSQRIAEG 673
           L K  C +          +Q I++G
Sbjct: 240 LMKGLCLDHKVERALQLWNQVISKG 264


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 195/389 (50%), Gaps = 11/389 (2%)

Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
           S+ +++  +C +     A R+L  M   G   D     +++  +CD G  G     F  +
Sbjct: 81  SFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM 140

Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
                K  KPNV T+  +I+GLCK G  + A  LF +L   D   P+  TY+ ++ G C+
Sbjct: 141 G----KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLP-HDLVDPDGFTYSTLVHGLCQ 195

Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
            E++  A  + + M E     +   Y ++  G CK    + A +++  M +  C P++  
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVT 255

Query: 405 YNAIIDGLCK-KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
           YN II+G+C+ K R++EAY L ++    +   + +TY  ++    K  E ++ L LF  M
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGM 315

Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR--DG 521
            KAGL+PD +AY +LI AF + +K+ E++   Q+A    + P    YT++I GY R    
Sbjct: 316 SKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKP 375

Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT-- 579
            +  A+  FQ M      P+ ITY  ++ GLCK  + DEA Q ++ M     SP  +T  
Sbjct: 376 RVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFK 435

Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLW 608
            +T+   +C++ D     I ++ + K  W
Sbjct: 436 VMTMGMIHCRKTDK-FERIFMDMVYKGRW 463



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 43/347 (12%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++  + ++GR+        +M     P + +T N V+   C+ G +++A  +F  +    
Sbjct: 120 VLKGYCDLGRVGRALIKFGKMGKTCKPNV-ATYNTVINGLCKFGKIDWAVHLFTRLPHDL 178

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           V  D  +Y  +V   C+  R+  A +    ML+     D      +   FC +     + 
Sbjct: 179 VDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKER---RVD 235

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCK-KGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           +A E+L+ M+++  KP+V T+  +I+G+C+ K   E+A+RLF ++V SD   PN  TY  
Sbjct: 236 EALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDC-PPNAVTYGT 294

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           MI G  K  ++ R   L + M + GL P+   Y SLIY   KV   + A  ++    +  
Sbjct: 295 MILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH 354

Query: 398 CTPNIY-------------------------------------AYNAIIDGLCKKGRVQE 420
             P++Y                                      YN ++ GLCK GR  E
Sbjct: 355 VGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDE 414

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           AY++ ++ F+ +   +++T+ ++    +   +T +   +F  MV  G
Sbjct: 415 AYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKG 461



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 33/171 (19%)

Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
           + G   D++ YT L+    R ++ +E+ +FF+  + A   P+  ++T +I  +    N  
Sbjct: 37  QEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPG 96

Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
            A +Y   M  +G  PD   Y  ++ G C   ++  A   +  M GK   P         
Sbjct: 97  RAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPN-------- 147

Query: 585 YEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
                                   + T NT+I  LC   ++  A   F +L
Sbjct: 148 ------------------------VATYNTVINGLCKFGKIDWAVHLFTRL 174


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 16/392 (4%)

Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
           R+  V EA  +   +LD G   +     +L+    D    G +  A  + +EM+R+G  P
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMR---DMIRSGKLASARNMFDEMLRRGVPP 277

Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
            V T   L+ G+CK      A  L   L+      P+V+TY A + G CK  ++  A  +
Sbjct: 278 TVVTFNTLMSGMCKASDLNSANAL-RGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336

Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
            E M+E+G+ PNT  +T+LI  HCK GN     +L   M   G   ++ AYNA+ +GLC+
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCR 396

Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
              ++ A +++++     L+ DK+TYT L+    K+ E   A+ +   M   G+  D   
Sbjct: 397 VRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVT 456

Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
           YTTLI+   +  +  +SE+   E + AGL P   TYT +I  + ++ ++ +  K  + M 
Sbjct: 457 YTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQ 516

Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--- 591
             G  P  +TY  +++G C   ++  A     +M+  G+ P ++T   L   +CK G   
Sbjct: 517 NKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVR 576

Query: 592 -----DSATAMIILESLDKKLWIRTVNTLIRK 618
                 SA  M+     D  L+   +N  ++K
Sbjct: 577 DAEELKSAKGMVS----DFGLYTSLINEFVKK 604



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 191/412 (46%), Gaps = 16/412 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNN-----GLPLITSTLNRVVGIACELGLVEYAEE 209
           ++  +  ++A+ G L +G S+++ +         LP  +  +NR       L  V  A  
Sbjct: 178 LVSAVAKAYADEGLLPDGCSLLLLLALRRGVRVPLPAWSDLMNR-------LPSVPEAYA 230

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
            + ++   GV  +A  + +++    R G++  A      ML RG      T   L++  C
Sbjct: 231 FYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMC 290

Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
                  +  A  L   M + G  P+VYT+   + GLCK G  + A  +F ++ R     
Sbjct: 291 KAS---DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM-RERGVN 346

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           PN   +T +I  +CKE  +     L   M  +G+  +   Y +L  G C+V + + A D+
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
           ++ M   G  P+   Y  +IDG CK+G +  A E+ ++     +  D++TYT L+S   K
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
              +  +  + C M++AGL PD   YT +I AFC+   +K   K  +E    G  P   T
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
           Y  ++ G+   G + +A      M  IG  PD+ITY  L+ G CK  K+ +A
Sbjct: 527 YNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 4/326 (1%)

Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
           +A+  +L+L+ +    P    +  ++    +  K+  A  + + M  +G+ P   T+ +L
Sbjct: 227 EAYAFYLQLLDA-GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTL 285

Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
           + G CK  +   A  L  LM K G  P++Y Y A + GLCK GR+Q+A E+ ++  +R +
Sbjct: 286 MSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGV 345

Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
             + + +T L+  H K+      L L   M   G+  D+ AY  L    CR + +K +  
Sbjct: 346 NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAND 405

Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
             +E    GL P K TYT++I G+ ++G +  A++  Q M+  G A D +TY  LISGL 
Sbjct: 406 IVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLS 465

Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD---KKLWIR 610
           K  +  ++ +    M+  G+ P   T   +   +CK  D  T   +L+ +    +K  + 
Sbjct: 466 KSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVV 525

Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLL 636
           T N ++   C   ++  A +  + +L
Sbjct: 526 TYNVVMNGFCILGQMKNADMLLNAML 551



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 11/365 (3%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           +M+ M+ S    G+L    +M  EM   G+P    T N ++   C+   +  A  +   M
Sbjct: 250 LMRDMIRS----GKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLM 305

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
              GV  D  +Y   +   C+ GR+ +A      M +RG   +    T LI A C +G  
Sbjct: 306 AKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEG-- 363

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
            ++    EL  EM  +G K ++  +  L +GLC+     KA    ++ +R++  KP+  T
Sbjct: 364 -NVAAGLELHREMATRGIKTDLVAYNALANGLCRV-RDLKAANDIVEEMRNNGLKPDKVT 421

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           YT +I G+CKE +++ A  + + M ++G+  +  TYT+LI G  K G    +  ++  M 
Sbjct: 422 YTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMM 481

Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
           + G  P+   Y  +ID  CK   V+  ++LLK+   +  +   +TY ++++      + K
Sbjct: 482 EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMK 541

Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
            A  L   M+  G+ PD   Y  L+   C+  K++++E+        G+      YTS+I
Sbjct: 542 NADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLI 598

Query: 515 CGYLR 519
             +++
Sbjct: 599 NEFVK 603



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 3/245 (1%)

Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
           V EAY    +     +  +   + +L+ + ++  +   A  +F  M++ G+ P +  + T
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
           L++  C+   +  +         AG+ P   TY + + G  + G I  AV+ F+ M + G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
             P+ + +  LI   CK+  +    + +  M  +GI    V    LA   C+  D   A 
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 598 IILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
            I+E +     K    T  TLI   C E  + MA     ++  +   +D V+   L +  
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464

Query: 655 YESNK 659
            +S +
Sbjct: 465 SKSGR 469



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 3/173 (1%)

Query: 484 RQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNI 543
           R   + E+  F+ + + AG+ P  + +  ++   +R G ++SA   F  M + G  P  +
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280

Query: 544 TYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
           T+  L+SG+CK S L+ A      M   G++P   T        CK G    A+ + E +
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 604 -DKKLWIRTV--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            ++ +   TV   TLI   C E  V        ++  +    D V+  AL N 
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANG 393



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++ +F +   +K GF ++ EM N G      T N V+   C LG ++ A+ + + M   G
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           VC D  +Y +++  +C+ G+V +A+   SA   +G + D    T LI  F  K
Sbjct: 555 VCPDDITYNILLDGHCKHGKVRDAEELKSA---KGMVSDFGLYTSLINEFVKK 604


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 235/511 (45%), Gaps = 21/511 (4%)

Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
           +V    + GRL+    +   M  N G  L       ++G   E G V++  E++ EM  R
Sbjct: 189 LVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDR 248

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+     +Y +M+  YC+   V  A    + M+  G   D    T+L+T+ C +G    +
Sbjct: 249 GMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEG---KL 305

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
            +A +L  +M+ +G  P+ +   + I     KGW     R  LK V   +    +   ++
Sbjct: 306 VEAEQLFTKMLERGVFPD-HVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSS 364

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           + SG         AE LL+ M    LLP       +I   C  G  + +Y L+D +   G
Sbjct: 365 LASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYG 424

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
             P++  YN +I  LC++ R+ +A  L+     R ++ D  T +I+++ + K  + + AL
Sbjct: 425 YEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESAL 484

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            LF  M K GL P I  Y ++IA  CR    KE+E   ++ I AGL P +  YT+++ GY
Sbjct: 485 SLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGY 544

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
               +  +A + F  M + G  P +  YGALI+GL K +K+ +A  + E M+ +G +   
Sbjct: 545 STMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQT 604

Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
           V    L  ++ ++G            ++ L +  V+ +++       +   AL    + G
Sbjct: 605 VIYTMLINQFFRKG------------EEWLGLDLVDLMMKNHVEPDLITYGAL----VTG 648

Query: 638 KDQNVDRVSLAALKNACYESNKYALFSDLSQ 668
             +N+DR  +     A  +  +Y LF  L Q
Sbjct: 649 ICRNIDRRDMRPSLAAKLDEARYMLFRLLPQ 679



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/531 (23%), Positives = 234/531 (44%), Gaps = 29/531 (5%)

Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
           ++  M+ +    GRL   + ++ ++   G      T N V+   C    ++ A  + + M
Sbjct: 396 ILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLM 455

Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
            +RGV  D S+  +MV AYC++G +  A      M   G     A    +I   C     
Sbjct: 456 QSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCR---L 512

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G  K+A   L +M+  G  P+   +T L++G      T+ A R+F +++     +P  H 
Sbjct: 513 GHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLER-GLQPGSHA 571

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           Y A+I+G  K+ K+ +A   LERM E+G    T  YT LI    + G      DL+DLM 
Sbjct: 572 YGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMM 631

Query: 395 KEGCTPNIYAYNAIIDGLCKK-----------GRVQEAYELLKKAFQRELQADKITYTIL 443
           K    P++  Y A++ G+C+             ++ EA  +L +         +I++   
Sbjct: 632 KNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLP------QISFGTR 685

Query: 444 LSEHLKQAETKQ-----ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
             +  K+  + +     A  +   +V++G+ PD+H Y  ++   CR +KM ++       
Sbjct: 686 KGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLM 745

Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
             +G+ P   TYT ++   +R G+ + A++ F  +N  G   D++ Y   I GL    + 
Sbjct: 746 EQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRT 805

Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWI---RTVNTL 615
            EA  F+  M  +G  P +     +  +   +  +  A+ I + +    +I      ++L
Sbjct: 806 KEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSL 865

Query: 616 IRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
           +  L  + +       F  +L K +++D  +   L+  CY+  +  L  +L
Sbjct: 866 LLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLLEELCYKQGELDLAFEL 916



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 180/424 (42%), Gaps = 44/424 (10%)

Query: 185 PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADR 244
           PL  S    ++   C  G V+ A  +FD M   G+      YK +V  YC+  R  EAD 
Sbjct: 110 PLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADE 169

Query: 245 WLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLID 304
               M+  G  LD                                          T L+ 
Sbjct: 170 MCCLMVKNGMYLDRML--------------------------------------GTALVK 191

Query: 305 GLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
           GLC++G  E A  +F ++  ++  + + + YT MI G  +   ++    L + MK++G+ 
Sbjct: 192 GLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGME 251

Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
           P   TY  +++ +CK      A +L ++M + G +P++  Y  ++  LCK+G++ EA +L
Sbjct: 252 PTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQL 311

Query: 425 LKKAFQRELQADKITYTILLSEHLKQAE---TKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
             K  +R +  D + +  +     K  E    ++AL    ++  +G   ++   ++L + 
Sbjct: 312 FTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSG---ELLELSSLASG 368

Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
                  +E+E+   E + + L P       MI     +G +  +     ++   G  P 
Sbjct: 369 CSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPS 428

Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
            +TY  +I  LC+Q ++D+A      M  +G+ P   T   +   YCK GD  +A+ + +
Sbjct: 429 VLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFD 488

Query: 602 SLDK 605
            + K
Sbjct: 489 EMAK 492



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 183/456 (40%), Gaps = 51/456 (11%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           MV+++ +IG ++   S+  EM  +GL    +  + ++   C LG  + AE    +M   G
Sbjct: 470 MVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAG 529

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
           +  D   Y  ++  Y  M     A R    ML+RG    +     LI           I+
Sbjct: 530 LVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDN---KIR 586

Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
           +A   LE M+ +G+      +T+LI+   +KG       L + L+  ++ +P++ TY A+
Sbjct: 587 KALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDL-VDLMMKNHVEPDLITYGAL 645

Query: 339 ISGYCK---------------------------------------------EEKMNRAEM 353
           ++G C+                                             EEK++ A+ 
Sbjct: 646 VTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQN 705

Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
           +++ + E G++P+ + Y  ++ G C+    + AY+L+ LM + G  PN   Y  +++   
Sbjct: 706 IIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDI 765

Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
           + G    A +L           D + Y   +        TK+AL  F  M K G  P   
Sbjct: 766 RLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKA 825

Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
           AY  ++     +     +   F +    G  P    Y+S++    +D       + F  M
Sbjct: 826 AYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMM 885

Query: 534 NQIGCAPDNITYGALISGLC-KQSKLDEACQFYESM 568
            + G + D  T   L+  LC KQ +LD A +   +M
Sbjct: 886 LEKGRSLDTET-KKLLEELCYKQGELDLAFELEGNM 920



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 167/390 (42%), Gaps = 40/390 (10%)

Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
           G+I  A    + ++   + P+  +   L+  +C      +   LF+    + +  P V  
Sbjct: 57  GNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLFVLWEGAPSPLP-VSK 115

Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
           +  +I G C +  +++A  L + M   GL P    Y SL++ +CK      A ++  LM 
Sbjct: 116 FPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMV 175

Query: 395 KEGCTPNIYAYNAIIDGLCKKGR------------------------------------V 418
           K G   +     A++ GLC++GR                                    V
Sbjct: 176 KNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYV 235

Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
              +EL ++   R ++   +TY +++  + K      A+ L+  MV+ G++PD+  YT L
Sbjct: 236 DHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTML 295

Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
           + + C++ K+ E+E+ F + +  G+FP    + S+   + +   +    K  + + ++ C
Sbjct: 296 MTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDC 355

Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
           + + +   +L SG    S   EA +  + M+   + P +     +    C +G    +  
Sbjct: 356 SGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYY 415

Query: 599 ILESLDKKLW---IRTVNTLIRKLCSEKRV 625
           +L+ L    +   + T N +I+ LC +KR+
Sbjct: 416 LLDKLVAYGYEPSVLTYNIVIKYLCRQKRM 445



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 8/280 (2%)

Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL--LKKAF 429
           +L+  H  +GN   A    D + +    P+  +  A++  +C      E  +L  L +  
Sbjct: 48  ALVACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLFVLWEGA 107

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
              L   K  +  L+     +    +A  LF  M+  GL P +  Y +L+  +C+ ++  
Sbjct: 108 PSPLPVSK--FPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSL 165

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN-QIGCAPDNITYGAL 548
           E+++     +  G++  +   T+++ G  ++G +  A+  F RM    G   D   Y  +
Sbjct: 166 EADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTM 225

Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK--- 605
           I GL +   +D   + Y+ M  +G+ P  VT   + + YCK      AM +   + +   
Sbjct: 226 IGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGV 285

Query: 606 KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
              +R    L+  LC E ++  A   F K+L +    D V
Sbjct: 286 SPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHV 325


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 241/497 (48%), Gaps = 9/497 (1%)

Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
           +  FF W      + H ++        L  + +F+ A  V++ +  +  +        S 
Sbjct: 57  SFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKI--AHKDFLSSPSVLST 114

Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
           ++  T++   + +  L+ +V    +  + + A +VF++M    V     +  +++ +  +
Sbjct: 115 LVR-THDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLK 173

Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
            G      +    M+  G + +      L  A C K   G +++A +LL EM  KG   +
Sbjct: 174 DGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHA-CSKS--GDVERAEQLLNEMDVKGVLQD 230

Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
           ++T+  L+   CKKG   +A  +  ++ R +    ++ +Y ++I G+CKE +M  A  + 
Sbjct: 231 IFTYNTLLSLYCKKGMHYEALSIQNRMER-EGINLDIVSYNSLIYGFCKEGRMREAMRMF 289

Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
             +K     PN  TYT+LI G+CK    E A  +  LM  +G  P +  YN+I+  LC+ 
Sbjct: 290 SEIKNAT--PNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQD 347

Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
           GR+++A +LL +  +R+LQAD IT   L++ + K  + K AL    +M++AGL PD   Y
Sbjct: 348 GRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTY 407

Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
             LI  FC+  +++ +++     + AG  P+  TY+ ++ GY +  N+ + +        
Sbjct: 408 KALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLS 467

Query: 536 IGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSAT 595
            G   D   Y ALI   CK  ++  A + +  M GKGIS   V   ++AY Y   G+ + 
Sbjct: 468 RGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSA 527

Query: 596 AMIILESLDKKLWIRTV 612
           A  +LE + ++  + TV
Sbjct: 528 ASSMLEEMARRRLMITV 544



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 156/342 (45%), Gaps = 23/342 (6%)

Query: 315 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLI 374
           +F  F  L    +Y  ++    AMI    + +    A+ +LE++  +  L + +  ++L+
Sbjct: 57  SFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLV 116

Query: 375 YGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQ 434
                     R +D  ++        N    + ++    K    Q+A ++ ++    E++
Sbjct: 117 ----------RTHDNQEV--------NSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVK 158

Query: 435 ADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
                 T+LL+  LK   T     ++ RMV+ G+ P+I+ Y  L  A  +   ++ +E+ 
Sbjct: 159 PHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQL 218

Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
             E    G+     TY +++  Y + G    A+    RM + G   D ++Y +LI G CK
Sbjct: 219 LNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCK 278

Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK-LW--IRT 611
           + ++ EA + +  +  K  +P  VT  TL   YCK  +   A+ + + ++ K L+  + T
Sbjct: 279 EGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVT 336

Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
            N+++RKLC + R+  A    +++  +    D ++   L NA
Sbjct: 337 YNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINA 378


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 213/502 (42%), Gaps = 74/502 (14%)

Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
           +ISNG FE       CM+  ++ +G+ KE   M  EMT  GL     T N  +   C+ G
Sbjct: 288 MISNG-FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 203 LVEYAEEVFDEMCAR-----------------------------------GVCADASSYK 227
             + A E FD M A+                                   G+ AD S Y 
Sbjct: 347 KSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYN 406

Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
           +++ AY + G + EA    + M +RG + D  T   +I AF      G +  A +   +M
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRM---GRLADAMDKFNQM 463

Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
           +  G KP+   +  LI G C  G   KA  L  +++     +PN   + ++I+  CKE +
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523

Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
           +  A+ + + +   G  P+  T+ SLI G+  VG  E+A+ ++D M   G  P++  Y+A
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583

Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
           ++DG C+ GR+ +   L ++   + ++   ITY I+L        T  A  +   M+++G
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 468 LNPDIHAYTTLIAAFCRQ-----------------------------------KKMKESE 492
              DI     ++   CR                                    +K +E+ 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703

Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
           + F      GL P   TY  MI   L++G++  A   F  M + GCAP +     +I  L
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763

Query: 553 CKQSKLDEACQFYESMIGKGIS 574
            ++ ++ +A  +   + GK IS
Sbjct: 764 LEKGEISKAGNYLSKVDGKTIS 785



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 198/414 (47%), Gaps = 11/414 (2%)

Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEA-DRWLSAMLDRGAILDNATLTLLITAF 268
           +F      G+  D     +++   C   R  +A +  L  M + G   D  + + ++ + 
Sbjct: 141 LFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSL 200

Query: 269 CDKGFRGSIKQAFELLEEMVRK--GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
           C+       ++A +LL  MV+K  G  PNV ++  +I G  ++G   KA  LF ++++  
Sbjct: 201 CEDS---RSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQ- 256

Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
              P+V TY++ I   CK   M++AE++L +M   G  P+  TY  +I+G+  +G ++  
Sbjct: 257 GVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKET 316

Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
             +   M + G  P+I+  N+ +  LCK G+ +EA E       +  + D +TY++LL  
Sbjct: 317 AGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG 376

Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
           +  +      L LF  M   G+  D   Y  LI A+ ++  M E+   F +    G+ P 
Sbjct: 377 YAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436

Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
             TY ++I  + R G ++ A+  F +M  +G  PD I Y +LI G C    L +A +   
Sbjct: 437 AWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELIS 496

Query: 567 SMIGKGIS-PCEVTRVTLAYEYCKQGDSATAMIILE---SLDKKLWIRTVNTLI 616
            M+ +GI  P  V   ++    CK+G    A  I +    + ++  + T N+LI
Sbjct: 497 EMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 186/392 (47%), Gaps = 5/392 (1%)

Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
           +M +NG      T N ++     LG  +    +F EM  RG+  D  +    + + C+ G
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
           +  EA  +  +M  +G   D  T ++L+  +  +G+   +     L   M   G   +  
Sbjct: 347 KSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGY---VVDMLNLFNSMEGNGIVADHS 403

Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
            + +LID   K+G  ++A  +F ++ +     P+  TY  +I+ + +  ++  A     +
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQM-QERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462

Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT-PNIYAYNAIIDGLCKKG 416
           M   GL P+T  Y SLI G C  GN  +A +L+  M   G   PN   +N+II+ LCK+G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
           RV EA ++         + D IT+  L+  +    + ++A G+   M+  G+ PD+  Y+
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
            L+  +CR  ++ +    F+E ++ G+ PT  TY  ++ G   DG    A K    M + 
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESM 568
           G   D  T G ++ GLC+ +  DEA   ++ +
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 170/378 (44%), Gaps = 5/378 (1%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           ++++F+ +GRL +      +M   GL   T   N ++   C  G +  A+E+  EM +RG
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502

Query: 219 VC-ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           +   +   +  ++ + C+ GRV EA      ++  G   D  T   LI  +   G  G +
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY---GLVGKM 559

Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
           ++AF +L+ M+  G +P+V T++ L+DG C+ G  +    LF +++ S   KP   TY  
Sbjct: 560 EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML-SKGVKPTTITYGI 618

Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
           ++ G   + +   A+ +   M E G   + +T   ++ G C+    + A  L   +G   
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
              NI   N +ID + K  + +EA EL        L  +  TY ++++  LK+   ++A 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
            +F  M K+G  P       +I     + ++ ++  +  +     +     T + M+  +
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLF 798

Query: 518 LRDGNISSAVKYFQRMNQ 535
            R G     +K    M Q
Sbjct: 799 SRKGKYREQIKSLPAMYQ 816



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 151/364 (41%), Gaps = 57/364 (15%)

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT--EKAFRLFLK-LVR---S 325
           GFR  I  AF    E VR G      TH  L D L ++     E+A   FL  L R   S
Sbjct: 31  GFRSPI-AAFATATERVRAGTLSTEDTHH-LFDELLRQTTPVPERALNGFLTALARAPSS 88

Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV----- 380
              +       A+ +  C+EE   R             LP   TY  L+   C+      
Sbjct: 89  ATCRDGPSLAVALFNRICREEARPRVA-----------LPTVCTYNILMDCCCRAHRPTV 137

Query: 381 -----GNF----------------------ERAYD----LMDLMGKEGCTPNIYAYNAII 409
                G F                      +R+ D    L+  M + G  P+  +Y+ ++
Sbjct: 138 GFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVL 197

Query: 410 DGLCKKGRVQEAYELLKKAFQRE--LQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
             LC+  R Q A +LL    ++      + ++Y  ++    ++ E  +A  LF  M++ G
Sbjct: 198 KSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQG 257

Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
           + PD+  Y++ I A C+ + M ++E   ++ I+ G  P K TY  MI GY   G      
Sbjct: 258 VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETA 317

Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
             F+ M + G  PD  T  + +S LCK  K  EA +F++SM  KG  P  VT   L + Y
Sbjct: 318 GMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGY 377

Query: 588 CKQG 591
             +G
Sbjct: 378 AAEG 381



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 8/258 (3%)

Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS--EHLKQAETKQAL 457
           P +  YN ++D  C+  R    + L  +  +  L+ D I   ILL    H K+++    +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI--TAGLFPTKETYTSMIC 515
            L  RM + G+ PD  +Y+T++ + C   + + +       +  + G  P   +Y ++I 
Sbjct: 177 -LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
           G+ R+G +S A   F  M Q G  PD +TY + I  LCK   +D+A      MI  G  P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 576 CEVTRVTLAYEYCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFF 632
            +VT   + + Y   G    TA +  E   + L   I T N+ +  LC   +   AA FF
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 633 HKLLGKDQNVDRVSLAAL 650
             +  K    D V+ + L
Sbjct: 356 DSMAAKGHKPDLVTYSVL 373


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 196/394 (49%), Gaps = 7/394 (1%)

Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
           FE        +++ F    R++E  SMV +M   G+         ++   C+ G V YA 
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
            +FD+M   G+  D   Y  +V   C  GR  +AD  L  M  R    D  T   LI AF
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
             +   G    A EL  EM+R    PN++T+T LI+G C +G  ++A ++F  L+ +   
Sbjct: 258 VKE---GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGC 313

Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
            P+V  YT++I+G+CK +K++ A  +   M ++GL  NT TYT+LI G  +VG    A +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373

Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA---DKITYTILLS 445
           +   M   G  PNI  YN ++  LC  G+V++A  + +   +RE+     +  TY +LL 
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433

Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
                 + ++AL +F  M K  ++  I  YT +I   C+  K+K +   F    + G+ P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493

Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
              TYT+MI G  R+G    A   F++M + G +
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 184/359 (51%), Gaps = 11/359 (3%)

Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
           G   ++YT  +L++  C+      A     K+++   ++P++ T+T++I+G+C   +M  
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL-GFEPDIVTFTSLINGFCLGNRMEE 160

Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
           A  ++ +M E G+ P+   YT++I   CK G+   A  L D M   G  P++  Y ++++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220

Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
           GLC  GR ++A  LL+   +R+++ D IT+  L+   +K+ +   A  L+  M++  + P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
           +I  YT+LI  FC +  + E+ + F    T G FP    YTS+I G+ +   +  A+K F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340

Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
             M+Q G   + ITY  LI G  +  K + A + +  M+ +G+ P   T   L +  C  
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400

Query: 591 GDSATAMIILESLDKK--------LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
           G    A++I E + K+        +W  T N L+  LC   ++  A + F  +  ++ +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIW--TYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 228/506 (45%), Gaps = 31/506 (6%)

Query: 117 LSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSS------------FA 164
           L   +W   F  +R  +R       + + +  F  A ++   MV S              
Sbjct: 28  LDLSFWVRAFCNYREILR-------NGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80

Query: 165 EIGRLKEGFSMVIEMTNN----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVC 220
            I ++K+ F +VI + ++    G+     T N ++   C+      A     +M   G  
Sbjct: 81  VIAKMKK-FDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139

Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
            D  ++  ++  +C   R+ EA   ++ M++ G   D    T +I + C  G    +  A
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG---HVNYA 196

Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
             L ++M   G +P+V  +T L++GLC  G    A  L L+ +     KP+V T+ A+I 
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL-LRGMTKRKIKPDVITFNALID 255

Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
            + KE K   AE L   M    + PN  TYTSLI G C  G  + A  +  LM  +GC P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315

Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
           ++ AY ++I+G CK  +V +A ++  +  Q+ L  + ITYT L+    +  +   A  +F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375

Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFF---QEAITAGLFPTKETYTSMICGY 517
             MV  G+ P+I  Y  L+   C   K+K++   F   Q+    G+ P   TY  ++ G 
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435

Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
             +G +  A+  F+ M +       ITY  +I G+CK  K+  A   + S+  KG+ P  
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495

Query: 578 VTRVTLAYEYCKQGDSATAMIILESL 603
           VT  T+     ++G    A ++   +
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 206/432 (47%), Gaps = 14/432 (3%)

Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
           D +   GV  D  +  L++  +C+  +   A  +L  M+  G   D  T T LI  FC  
Sbjct: 96  DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC-- 153

Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY--K 329
                +++A  ++ +MV  G KP+V  +T +ID LCK G    A  LF ++   +NY  +
Sbjct: 154 -LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIR 209

Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
           P+V  YT++++G C   +   A+ LL  M ++ + P+  T+ +LI    K G F  A +L
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269

Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
            + M +    PNI+ Y ++I+G C +G V EA ++      +    D + YT L++   K
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329

Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
             +   A+ +F  M + GL  +   YTTLI  F +  K   +++ F   ++ G+ P   T
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389

Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQ---IGCAPDNITYGALISGLCKQSKLDEACQFYE 566
           Y  ++     +G +  A+  F+ M +    G AP+  TY  L+ GLC   KL++A   +E
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449

Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEK 623
            M  + +    +T   +    CK G    A+ +  SL     K  + T  T+I  L  E 
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509

Query: 624 RVGMAALFFHKL 635
               A + F K+
Sbjct: 510 LKHEAHVLFRKM 521



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 11/383 (2%)

Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
           +L +GL    + E A  LF  +V S    P++  +T +++   K +K +    L + ++ 
Sbjct: 43  ILRNGLHSLQFNE-ALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQI 100

Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
            G+  +  T   L+   C+      A   +  M K G  P+I  + ++I+G C   R++E
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
           A  ++ +  +  ++ D + YT ++    K      AL LF +M   G+ PD+  YT+L+ 
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
             C   + ++++   +      + P   T+ ++I  ++++G    A + +  M ++  AP
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
           +  TY +LI+G C +  +DEA Q +  M  KG  P  V   +L   +CK      AM I 
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340

Query: 601 ESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL--GKDQNVDRVSLAALKNACY 655
             + +K       T  TLI+      +  +A   F  ++  G   N+ R     L   CY
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI-RTYNVLLHCLCY 399

Query: 656 ESN-KYAL--FSDLSQRIAEGIG 675
               K AL  F D+ +R  +G+ 
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVA 422


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 32/448 (7%)

Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
           +V    ++ R  +  ++  EM   GL    +  N ++   C LG++  A  +   M A  
Sbjct: 167 LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA 226

Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
              DA +Y ++V A+CR G++ E   ++      G  L       +I  F   G      
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 279 QAFE-------------------------------LLEEMVRKGWKPNVYTHTVLIDGLC 307
           Q FE                               L +E  + G   +V+T++ L+D   
Sbjct: 287 QLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFG 346

Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
           K G   KA  +F  + ++    P+   Y  +IS   K+ K++ A  LLE M  +G++P+ 
Sbjct: 347 KAGRAAKALEVFYNMQKA-GCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
            TY  +I      G +E+AY    +M +   +P++  YN +++GL K  R  EA +L  +
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465

Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
               +   D  T+  L+    K    + AL    R+VK G  P+ + Y  LI+ FCR  +
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525

Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
           + +  + FQ+ I    FP   TYT ++ G+ R G+ S A++  Q M + G  P   TY  
Sbjct: 526 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 585

Query: 548 LISGLCKQSKLDEACQFYESMIGKGISP 575
           LI  L    ++++A   ++ MI KG +P
Sbjct: 586 LIRSLSMAGQVEDAYTLFKEMIAKGFNP 613



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 220/466 (47%), Gaps = 8/466 (1%)

Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
           + + +V   C++     A  VF EM   G+ AD +    ++   CR+G + +A R L  M
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222

Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
                  D  T  +L+ A C  G    + +    +E     G   +   +  +I G  + 
Sbjct: 223 TAHACARDAFTYGILVNAHCRAG---QMHEVASFMELARHDGCALSAVNYNFIIQGFIRC 279

Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
           G   +A +LF   +  ++  P+V TY  +I+  CK +++  A  L +  ++ G++ +  T
Sbjct: 280 GRLAEATQLFESTMTKESV-PDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFT 337

Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
           Y+ L+    K G   +A ++   M K GC P+   YN +I  L K+G+V EA ELL+   
Sbjct: 338 YSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397

Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
           ++ +  D  TY I++         ++A   F  M +   +PD+  Y TL+    + ++  
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457

Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
           E+   F E       P   T+ ++I    + G +  A++   R+ ++G AP++  Y ALI
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALI 517

Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
           SG C+  ++D+  + ++ MI     P  +T   L   + ++G ++ AM +L+ + ++   
Sbjct: 518 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577

Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
             + T N LIR L    +V  A   F +++ K  N D  + +AL N
Sbjct: 578 PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 198/458 (43%), Gaps = 44/458 (9%)

Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
           G+  DA +   MV   C++GR       L+ +  +G  L   T T  I AF   G  G +
Sbjct: 13  GLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAF---GRAGDL 69

Query: 278 KQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
             A  +L++M R  + +P+    T  +  LC+    E+A  LF  +  + +  P+V  Y 
Sbjct: 70  DAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYN 129

Query: 337 AMISGYCKEEKMNRAEMLLERMKEQG---------------------------------- 362
            +I+GYCK    +RA  +  R+K++G                                  
Sbjct: 130 TLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLG 189

Query: 363 --LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
             L  + N   +LI+  C++G   +A  L+  M    C  + + Y  +++  C+ G++ E
Sbjct: 190 AGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHE 249

Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
               ++ A         + Y  ++   ++     +A  LF   +     PD+  Y  LI 
Sbjct: 250 VASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI- 308

Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
           A C+ K+++E+   FQEA   G+     TY+ ++  + + G  + A++ F  M + GC P
Sbjct: 309 ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP 368

Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISP-CEVTRVTL-AYEYCKQGDSATAMI 598
           D + Y  LIS L KQ K+DEA +  E M  KGI P C    + +     C + + A +  
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 428

Query: 599 -ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
            +++       + T NTL+  L   +R   A   F ++
Sbjct: 429 GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 466



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 6/194 (3%)

Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
           AL  +  ++KAGL  D H  T ++   C+  + +   +   E    G+  ++ T T  I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 516 GYLRDGNISSAVKYFQRMNQIG-CAPDNITYGALISGLCKQSKLDEACQFYESMIGK-GI 573
            + R G++ +A+     M +   C PD + + A +  LC+  ++++A   ++ M      
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMAA 629
           +P  V   TL   YCK GD   A+ +   L ++   +    + +TL+  LC   R   A 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 630 LFFHKLLGKDQNVD 643
             F ++LG     D
Sbjct: 182 AVFQEMLGAGLKAD 195


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.135    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,676,599,575
Number of Sequences: 23463169
Number of extensions: 378358316
Number of successful extensions: 1205305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7836
Number of HSP's successfully gapped in prelim test: 4764
Number of HSP's that attempted gapping in prelim test: 957012
Number of HSP's gapped (non-prelim): 75740
length of query: 675
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 525
effective length of database: 8,839,720,017
effective search space: 4640853008925
effective search space used: 4640853008925
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)