BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044815
(675 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/649 (63%), Positives = 490/649 (75%), Gaps = 32/649 (4%)
Query: 59 QSLVKTVCSMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALS 118
Q LVK+VCS+V SY +Q H+ SSP R+NL D +SLTHEQAITVVASLA+E+GSMVAL
Sbjct: 53 QCLVKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALC 112
Query: 119 FFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIE 178
FFYWA+GF KFRHFMRLY+V A SL++NGN ++AHEVM+CM+ +F+EIGRL E MV++
Sbjct: 113 FFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMD 172
Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
M N GL + T+N V+ IA ELGL+EYAE VFDEM RGV D+SSYKLMV+ R G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF------------------------- 273
+ EADRWL+ M+ RG I DNAT TL++TA C+ G
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 274 -------RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
+GSIKQAFE+LEEMVR GWKPNVYTHT LIDGLCK+GWTEKAFRLFLKLVRSD
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
YKPNVHTYT+MI GYCKE+K+NRAEML RMKEQGL PN NTYT+LI GHCK G+F RA
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 387 YDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
Y+LM+LMG EG PNIY YNA ID LCKK R EAYELL KAF L+AD +TYTIL+ E
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
KQ + QAL FCRM K G D+ LIAAFCRQKKMKESE+ FQ ++ GL PT
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
KETYTSMI Y ++G+I A+KYF M + GC PD+ TYG+LISGLCK+S +DEAC+ YE
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVG 626
+MI +G+SP EVTRVTLAYEYCK+ DSA AMI+LE LDKKLWIRTV TL+RKLCSEK+VG
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVG 652
Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEGIG 675
+AALFF KLL KD + DRV+LAA AC ES K L +DL++RI+ G+G
Sbjct: 653 VAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISRGVG 701
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 255/552 (46%), Gaps = 46/552 (8%)
Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
AL+F +W +++H + Y T LI+NG ++ M+ S +G +
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165
Query: 176 VIEMTNN-----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
+M + LI N ++ GLV+ ++V+ EM VC + +Y MV
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
YC++G V EA++++S +++ G D T T LI +C R + AF++ EM K
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ---RKDLDSAFKVFNEMPLK 282
Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY---------------------- 328
G + N +T LI GLC ++A LF+K+ + +
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 329 ------------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
KPN+HTYT +I C + K +A LL +M E+GL+PN TY +LI G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
+CK G E A D+++LM +PN YN +I G C K V +A +L K +R++ D
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPD 461
Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
+TY L+ + A L M GL PD YT++I + C+ K+++E+ F
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
G+ P YT++I GY + G + A ++M C P+++T+ ALI GLC
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
KL EA E M+ G+ P T L + K GD A + + K T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 614 TLIRKLCSEKRV 625
T I+ C E R+
Sbjct: 642 TFIQTYCREGRL 653
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 231/493 (46%), Gaps = 27/493 (5%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ S R E ++V EM G+ T ++ C E A E+ +M +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y ++ YC+ G + +A + M R + T LI +C + ++
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC----KSNVH 444
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +M+ + P+V T+ LIDG C+ G + A+RL L L+ P+ TYT+M
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL-LSLMNDRGLVPDQWTYTSM 503
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I CK +++ A L + ++++G+ PN YT+LI G+CK G + A+ +++ M + C
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PN +NA+I GLC G+++EA L +K + LQ T TIL+ LK + A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
F +M+ +G PD H YTT I +CR+ ++ ++E + G+ P TY+S+I GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISG---------------LCKQSKL---DE 560
G + A +RM GC P T+ +LI LC S + D
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 561 ACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLI 616
+ E M+ ++P + L C+ G+ A + + + + I N L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 617 RKLCSEKRVGMAA 629
C K+ AA
Sbjct: 804 SCCCKLKKHNEAA 816
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 201/416 (48%), Gaps = 18/416 (4%)
Query: 246 LSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE--------EMVRKGWKPNVY 297
L+ +++ G + + LL+ CD S+ A +L+ E +K +
Sbjct: 130 LTLLINNGYVGVVFKIRLLMIKSCD-----SVGDALYVLDLCRKMNKDERFELKYKLIIG 184
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
+ L++ L + G ++ +++++++ D PN++TY M++GYCK + A + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLE-DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
+ E GL P+ TYTSLI G+C+ + + A+ + + M +GC N AY +I GLC R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
+ EA +L K E TYT+L+ +AL L M + G+ P+IH YT
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
LI + C Q K +++ + + + GL P TY ++I GY + G I AV + M
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
+P+ TY LI G CK S + +A M+ + + P VT +L C+ G+ +A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 598 IILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
+L ++ + + T ++I LC KRV A F L K N + V AL
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 26/419 (6%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
G + ++ M + GL T ++ C+ VE A ++FD + +GV + Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
++ YC+ G+V EA L ML + + ++ T LI C G +K+A L E+
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG---KLKEATLLEEK 592
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
MV+ G +P V T T+LI L K G + A+ F +++ S KP+ HTYT I YC+E
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREG 651
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
++ AE ++ +M+E G+ P+ TY+SLI G+ +G A+D++ M GC P+ + +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 407 AIIDGLC------KKGRVQE------------AYELLKKAFQRELQADKITYTILLSEHL 448
++I L +KG E ELL+K + + + +Y L+
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 449 KQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
+ + A +F M + G++P + L++ C+ KK E+ K + I G P
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
E+ +ICG + G FQ + Q G D + + +I G+ KQ L EA FYE
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG-LVEA--FYE 887
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 162/381 (42%), Gaps = 42/381 (11%)
Query: 137 IVCATSLISN----GNFERAHEVMQCMVS--------SFAEI-------GRLKEGFSMVI 177
+V T+LI G + AH +++ M+S +F + G+LKE +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
+M GL ST ++ + G ++A F +M + G DA +Y + YCR G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
R+ +A+ ++ M + G D T + LI + G G AF++L+ M G +P+ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 298 THTVLIDGLCKKGWTEK------------------AFRLFLKLVRSDNYKPNVHTYTAMI 339
T LI L + + ++ L K+V + PN +Y +I
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH-SVTPNAKSYEKLI 767
Query: 340 SGYCKEEKMNRAEMLLERM-KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
G C+ + AE + + M + +G+ P+ + +L+ CK+ A ++D M G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P + + +I GL KKG + + + Q D++ + I++ KQ +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 459 LFCRMVKAGLNPDIHAYTTLI 479
LF M K G Y+ LI
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLI 908
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 236/469 (50%), Gaps = 45/469 (9%)
Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL-----VEYAEEVFDEMCARGVCADAS 224
K G++ EM + + I L+ +G + LG + A +VFD M CA S
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 225 -SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFEL 283
SY +++ C +GR+ EA M ++G T T+LI A CD RG I +AF L
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD---RGLIDKAFNL 323
Query: 284 LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYC 343
+EM+ +G KPNV+T+TVLIDGLC+ G E+A + K+V+ D P+V TY A+I+GYC
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK-DRIFPSVITYNALINGYC 382
Query: 344 KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIY 403
K+ ++ A LL M+++ PN T+ L+ G C+VG +A L+ M G +P+I
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
+YN +IDGLC++G + AY+LL +++ D +T+T +++ KQ + A M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 464 VKAGLNPDIHAYTTLIAAFCRQK-----------------------------------KM 488
++ G++ D TTLI C+ K+
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
KE + GL P+ TYT+++ G +R G+I+ + + + M GC P+ Y +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
I+GLC+ +++EA + +M G+SP VT + Y G A+
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 201/414 (48%), Gaps = 4/414 (0%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ E+GRL+E F + +M G T T ++ C+ GL++ A +FDEM RG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ +Y +++ CR G++ EA+ M+ T LI +C G +
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG---RVV 388
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
AFELL M ++ KPNV T L++GLC+ G KA L LK + + P++ +Y +
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL-LKRMLDNGLSPDIVSYNVL 447
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G C+E MN A LL M + P+ T+T++I CK G + A + LM ++G
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+ + +IDG+CK G+ ++A +L+ + + + ++L K + K+ L
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ ++ K GL P + YTTL+ R + S + + +G P YT +I G
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
+ G + A K M G +P+++TY ++ G KLD A + +M+ +G
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 16/388 (4%)
Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
L V Y RM EAD ++ M+D I + A C G+ + A + ++
Sbjct: 178 LAYVTYRRM----EADGFVVGMIDYRTI---------VNALCKNGY---TEAAEMFMSKI 221
Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
++ G+ + + T L+ G C+ A ++F + + PN +Y+ +I G C+ +
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
+ A L ++M E+G P+T TYT LI C G ++A++L D M GC PN++ Y
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
+IDGLC+ G+++EA + +K + + ITY L++ + K A L M K
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
P++ + L+ CR K ++ + + GL P +Y +I G R+G++++A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
K MN PD +T+ A+I+ CKQ K D A F M+ KGIS EVT TL
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 588 CKQGDSATAMIILESLDKKLWIRTVNTL 615
CK G + A+ ILE+L K + T ++L
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSL 549
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/561 (25%), Positives = 249/561 (44%), Gaps = 63/561 (11%)
Query: 115 VALSFFYWAIGFAKF-------RHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA--- 164
+ + FF W + + ++L ++S+G + AH V+ ++ +
Sbjct: 85 ICVRFFMWVCKHSSYCFDPTQKNQLLKL-------IVSSGLYRVAHAVIVALIKECSRCE 137
Query: 165 -EIGRLKEGFSMVIEMTNNGL--PLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCA 221
E+ +L F + E+ L P +S L + + +LG + Y + M A G
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKL--DLGFLAYV--TYRRMEADGFVV 193
Query: 222 DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR------- 274
Y+ +V A C+ G A+ ++S +L G +LD+ T L+ FC +G
Sbjct: 194 GMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC-RGLNLRDALKV 252
Query: 275 ---------------------------GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
G +++AF L ++M KG +P+ T+TVLI LC
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
+G +KAF LF +++ KPNVHTYT +I G C++ K+ A + +M + + P+
Sbjct: 313 DRGLIDKAFNLFDEMI-PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
TY +LI G+CK G A++L+ +M K C PN+ +N +++GLC+ G+ +A LLK+
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
L D ++Y +L+ ++ A L M + PD +T +I AFC+Q K
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
+ F + G+ + T T++I G + G A+ + + ++ +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
++ L K K+ E + G+ P VT TL + GD + ILE +
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 608 WIRTV---NTLIRKLCSEKRV 625
+ V +I LC RV
Sbjct: 612 CLPNVYPYTIIINGLCQFGRV 632
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 50/417 (11%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ +G+ + ++ M +NGL + N ++ C G + A ++ M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG------ 272
+ D ++ ++ A+C+ G+ A +L ML +G LD T T LI C G
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 273 -------------------------FRG-SIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
+G +K+ +L ++ + G P+V T+T L+DGL
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
+ G +FR+ L+L++ PNV+ YT +I+G C+ ++ AE LL M++ G+ PN
Sbjct: 592 IRSGDITGSFRI-LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG--LCKKGRVQEAYEL 424
TYT ++ G+ G +RA + + M + G N Y++++ G L +KG
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710
Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH----------- 473
+ RE + I I + E L + + L R+ K G + +
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770
Query: 474 ----AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
A ++ ++C +KK + + + +G P+ +++ +I G ++G+ A
Sbjct: 771 FLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 146/360 (40%), Gaps = 11/360 (3%)
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCK--EEKMNRAEMLLERMKEQ-GLLPNTNTYTSLIY 375
LKL+ S H + C E++M + + ++E G N Y+SL+
Sbjct: 109 LLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLM 168
Query: 376 GHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQA 435
K+ AY M +G + Y I++ LCK G + A + K +
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL 228
Query: 436 DKITYTILLSEHLKQAETKQALGLFCRMVK-AGLNPDIHAYTTLIAAFCRQKKMKESEKF 494
D T LL + + AL +F M K P+ +Y+ LI C +++E+
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 495 FQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCK 554
+ G P+ TYT +I G I A F M GC P+ TY LI GLC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 555 QSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRT 611
K++EA M+ I P +T L YCK G A +L ++K K +RT
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 612 VNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---SNKYALFSDLS 667
N L+ LC + A ++L + D VS L + C E + Y L S ++
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 140/312 (44%), Gaps = 24/312 (7%)
Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
++KE +M+ ++ GL T +V G + + + + M G + Y
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
+++ C+ GRV EA++ LSAM D G ++ T T+++ + + G + +A E + M
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG---KLDRALETVRAM 677
Query: 288 VRKGWKPNVYTHTVLIDG--LCKKGW--TEKAFRLFLKLVRSDNYKPN-----VHTYTAM 338
V +G++ N ++ L+ G L +KG +E++ + L +D N V
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGC 737
Query: 339 ISGYC--------KEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
ISG C KE + + + L++ + E+G+ ++ +C + +L+
Sbjct: 738 ISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELI 796
Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK---ITYTILLSEH 447
L+ K G P+ ++ +I GL K+G + A EL+ + +K +TY L E
Sbjct: 797 TLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856
Query: 448 LKQAETKQALGL 459
+ + + + L
Sbjct: 857 DETGDCSEVIDL 868
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIG-----RLKEGFSMVIEMTNNGLPLITST 190
Y V ++NG +RA E ++ MV E+ L +GF + + +N S
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 191 LN-RVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
+ R C L+ E++ C G+C +V C+ GR E++ + +
Sbjct: 714 IALRETDPECINELISVVEQLGG--CISGLCI------FLVTRLCKEGRTDESNDLVQNV 765
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
L+RG L+ A + +++ ++C K + EL+ +++ G+ P+ + ++I GL K+
Sbjct: 766 LERGVFLEKA-MDIIMESYCSKKKH---TKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821
Query: 310 GWTEKAFRLFLKLVRSDNY--KPNVHTYTAMI-----SGYCKE 345
G E+A L ++L+ S+ K V TY + +G C E
Sbjct: 822 GDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSE 864
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 224/447 (50%), Gaps = 21/447 (4%)
Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
+ +AE VF EM V + +Y +++ +C G + A M +G + + T
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
LI +C I F+LL M KG +PN+ ++ V+I+GLC++G ++ + ++
Sbjct: 246 LIDGYCK---LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
R Y + TY +I GYCKE ++A ++ M GL P+ TYTSLI+ CK GN
Sbjct: 303 RR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
RA + +D M G PN Y ++DG +KG + EAY +L++ +TY L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
++ H + + A+ + M + GL+PD+ +Y+T+++ FCR + E+ + +E + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
P TY+S+I G+ A ++ M ++G PD TY ALI+ C + L++A Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEK 623
+ M+ KG+ P D T +++ L+K+ R L+ KL E+
Sbjct: 542 LHNEMVEKGVLP----------------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 624 RVGMAALFFHKLLGKDQNVDRVSLAAL 650
V + + +H L+ N++ S+ +L
Sbjct: 586 SVP-SDVTYHTLIENCSNIEFKSVVSL 611
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 238/487 (48%), Gaps = 24/487 (4%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
++ F G + ++ +M G LP + T N ++ C+L ++ ++ M +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVV-TYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
G+ + SY +++ CR GR+ E L+ M RG LD T LI +C +G +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG---NF 326
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
QA + EM+R G P+V T+T LI +CK G +A FL +R PN TYT
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTT 385
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
++ G+ ++ MN A +L M + G P+ TY +LI GHC G E A +++ M ++G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
+P++ +Y+ ++ G C+ V EA + ++ ++ ++ D ITY+ L+ +Q TK+A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
L+ M++ GL PD YT LI A+C + ++++ + E + G+ P TY+ +I G
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYG---------------ALISGLCKQSKLDEAC 562
+ A + ++ P ++TY +LI G C + + EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKL 619
Q +ESM+GK P + + +C+ GD A + + + K L TV L++ L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 620 CSEKRVG 626
E +V
Sbjct: 686 HKEGKVN 692
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 205/390 (52%), Gaps = 12/390 (3%)
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK----GWTEKAFRLFLKLVRSDNYKPNV 332
I +A ++ G+ P V ++ ++D + + E F+ L+ PNV
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE----SQVSPNV 205
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
TY +I G+C ++ A L ++M+ +G LPN TY +LI G+CK+ + + L+
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M +G PN+ +YN +I+GLC++GR++E +L + +R D++TY L+ + K+
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
QAL + M++ GL P + YT+LI + C+ M + +F + GL P + TYT+
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
++ G+ + G ++ A + + MN G +P +TY ALI+G C K+++A E M KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAM-IILESLDKKLWIRTV--NTLIRKLCSEKRVGMAA 629
+SP V+ T+ +C+ D A+ + E ++K + T+ ++LI+ C ++R A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 630 LFFHKLLGKDQNVDRVSLAALKNA-CYESN 658
+ ++L D + AL NA C E +
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 225/476 (47%), Gaps = 58/476 (12%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ + ++ ++ +GF ++ M GL + N V+ C G ++ V EM RG
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D +Y ++ YC+ G +A + ML G T T LI + C G ++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG---NMN 362
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A E L++M +G PN T+T L+DG +KG+ +A+R+ L+ + + + P+V TY A+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV-LREMNDNGFSPSVVTYNAL 421
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I+G+C KM A +LE MKE+GL P+ +Y++++ G C+ + + A + M ++G
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+ Y+++I G C++ R +EA +L ++ + L D+ TYT L++ + + + ++AL
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 459 LFCRMVKAGLNPDIHAYT------------------------------------------ 476
L MV+ G+ PD+ Y+
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 477 --------TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
+LI FC + M E+++ F+ + P Y MI G+ R G+I A
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
++ M + G +T AL+ L K+ K++E S+I + CE++ A
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNE----LNSVIVHVLRSCELSEAEQA 713
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 176/408 (43%), Gaps = 65/408 (15%)
Query: 129 FRHFMRLYIVCATSLISN----GNFERAHEVMQCM---------------VSSFAEIGRL 169
RH + ++ TSLI + GN RA E + M V F++ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 170 KEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
E + ++ EM +NG T N ++ C G +E A V ++M +G+ D SY +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------- 272
+ +CR V EA R M+++G D T + LI FC++
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 273 ---------------FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
G +++A +L EMV KG P+V T++VLI+GL K+ T +A R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 318 LFLKLVRSDNYKPNVHTYT--------------AMISGYCKEEKMNRAEMLLERMKEQGL 363
L LKL ++ +V +T ++I G+C + M A+ + E M +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
P+ Y +I+GHC+ G+ +AY L M K G + A++ L K+G+V E
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 424 LLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
++ + ++ +L+ + ++ L + M K G P+
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR-VQEAYELL 425
++ + ++ + ++ ++A ++ L G P + +YNA++D + R + A +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
K+ + ++ + TY IL+ AL LF +M G P++ Y TLI +C+
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
+K+ + K + GL P +Y +I G R+G + MN+ G + D +TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
LI G CK+ +A + M+ G++P +T +L + CK G+ AM L+ +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR- 372
Query: 606 KLWIRTVNTLIRKLCSEKR 624
+R LC +R
Sbjct: 373 ----------VRGLCPNER 381
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 201/377 (53%), Gaps = 4/377 (1%)
Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
CE G +E + ++ E+ G + Y ++ C+ G + +A M G + +
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
T T+LI G + KQ FE+ E+M G PN+YT+ +++ LCK G T+ AF++
Sbjct: 234 RTYTVLINGLFKNGVK---KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
F ++ R N+ TY +I G C+E K+N A ++++MK G+ PN TY +LI G C
Sbjct: 291 FDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
VG +A L + G +P++ YN ++ G C+KG A +++K+ +R ++ K+
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
TYTIL+ + ++A+ L M + GL PD+H Y+ LI FC + +M E+ + F+
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
+ P + Y +MI GY ++G+ A+K + M + AP+ +Y +I LCK+ K
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 559 DEACQFYESMIGKGISP 575
EA + E MI GI P
Sbjct: 530 KEAERLVEKMIDSGIDP 546
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 237/458 (51%), Gaps = 17/458 (3%)
Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGA--ILDNATLTLLITAF 268
F+EM G ++ + ++ + ++W S + + +LD + +LI
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGS---SSFNQWWSFFNENKSKVVLDVYSFGILIKGC 173
Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
C+ G I+++F+LL E+ G+ PNV +T LIDG CKKG EKA LF ++ +
Sbjct: 174 CEAG---EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL-GL 229
Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
N TYT +I+G K + + E+M+E G+ PN TY ++ CK G + A+
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
+ D M + G + NI YN +I GLC++ ++ EA +++ + + + ITY L+
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 449 KQAETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
+ +AL L CR +K+ GL+P + Y L++ FCR+ + K +E G+ P+K
Sbjct: 350 GVGKLGKALSL-CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
TYT +I + R N+ A++ M ++G PD TY LI G C + +++EA + ++S
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKR 624
M+ K P EV T+ YCK+G S A+ +L+ +++K V + +I LC E++
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 625 VGMAALFFHKLL--GKDQNVDRVSLAA-LKNACYESNK 659
A K++ G D + +SL + KN + S+K
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSSK 566
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 192/396 (48%), Gaps = 40/396 (10%)
Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
E G +++ F ++IE+T G ++ C+ G +E A+++F EM G+ A+
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 225 SYKLMVVAY-----------------------------------CRMGRVTEADRWLSAM 249
+Y +++ C+ GR +A + M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
+RG + T LI C + + +A +++++M G PN+ T+ LIDG C
Sbjct: 295 RERGVSCNIVTYNTLIGGLCRE---MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
G KA L L +S P++ TY ++SG+C++ + A +++ M+E+G+ P+ T
Sbjct: 352 GKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
YT LI + N E+A L M + G P+++ Y+ +I G C KG++ EA L K
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
++ + +++ Y ++ + K+ + +AL L M + L P++ +Y +I C+++K K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
E+E+ ++ I +G+ P+ + S+I D ++SS
Sbjct: 531 EAERLVEKMIDSGIDPST-SILSLISRAKNDSHVSS 565
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 156/310 (50%), Gaps = 21/310 (6%)
Query: 134 RLYIVCATSLISNG----NFERAHEVMQ------------CMVSSFAEIGRLKEGFSMVI 177
R Y V L NG FE +E MQ C+++ + GR K+ F +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFE-MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
EM G+ T N ++G C + A +V D+M + G+ + +Y ++ +C +G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
++ +A + RG T +L++ FC K G A ++++EM +G KP+
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK---GDTSGAAKMVKEMEERGIKPSKV 409
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
T+T+LID + EKA +L L + P+VHTY+ +I G+C + +MN A L +
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
M E+ PN Y ++I G+CK G+ RA L+ M ++ PN+ +Y +I+ LCK+ +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 418 VQEAYELLKK 427
+EA L++K
Sbjct: 529 SKEAERLVEK 538
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 211/410 (51%), Gaps = 4/410 (0%)
Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
++GR+KE +++ M G + + VV C G ++ ++ + M +G+ ++
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
Y ++ CR+ ++ EA+ S M+ +G + D T LI FC RG I+ A +
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFF 374
Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
EM + P+V T+T +I G C+ G +A +LF ++ +P+ T+T +I+GYCK
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCK 433
Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
M A + M + G PN TYT+LI G CK G+ + A +L+ M K G PNI+
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
YN+I++GLCK G ++EA +L+ + L AD +TYT L+ + K E +A + M+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
GL P I + L+ FC +++ EK + G+ P T+ S++ Y N+
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
+A ++ M G PD TY L+ G CK + EA ++ M GKG S
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 241/498 (48%), Gaps = 7/498 (1%)
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
E G+ ++ N V+ C+LG ++ A + M +G D SY +V YCR G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
+ + + + M +G ++ +I C + +A E EM+R+G P+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---KLAEAEEAFSEMIRQGILPDTV 352
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
+T LIDG CK+G A + F ++ S + P+V TYTA+ISG+C+ M A L
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
M +GL P++ T+T LI G+CK G+ + A+ + + M + GC+PN+ Y +IDGLCK+G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
+ A ELL + ++ LQ + TY +++ K ++A+ L AGLN D YTT
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
L+ A+C+ +M ++++ +E + GL PT T+ ++ G+ G + K M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
AP+ T+ +L+ C ++ L A Y+ M +G+ P T L +CK + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 598 IILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNAC 654
+ + + K + + T + LI+ K+ A F ++ + D+ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 655 YESNKYALFSDLSQRIAE 672
Y+ + D I E
Sbjct: 712 YKGKRPDTIVDPIDEIIE 729
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 207/416 (49%), Gaps = 4/416 (0%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G L + + ++ M GL + ++G+ C + + AEE F EM +G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ D Y ++ +C+ G + A ++ M R D T T +I+ FC G +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMV 403
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L EM KG +P+ T T LI+G CK G + AFR+ ++++ PNV TYT +
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTL 462
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G CKE ++ A LL M + GL PN TY S++ G CK GN E A L+ G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+ Y ++D CK G + +A E+LK+ + LQ +T+ +L++ +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
L M+ G+ P+ + +L+ +C + +K + +++ + G+ P +TY +++ G+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
+ N+ A FQ M G + TY LI G K+ K EA + ++ M +G++
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 13/462 (2%)
Query: 221 ADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQA 280
+D + + G + EA R ML+ G +L + + +T ++ + A
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TA 230
Query: 281 FELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMIS 340
+ E G NV ++ ++I +C+ G ++A L L L+ Y P+V +Y+ +++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVN 289
Query: 341 GYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTP 400
GYC+ ++++ L+E MK +GL PN+ Y S+I C++ A + M ++G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 401 NIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLF 460
+ Y +IDG CK+G ++ A + + R++ D +TYT ++S + + +A LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 461 CRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRD 520
M GL PD +T LI +C+ MK++ + I AG P TYT++I G ++
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTR 580
G++ SA + M +IG P+ TY ++++GLCK ++EA + G++ VT
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 581 VTLAYEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
TL YCK G+ A IL E L K L I T N L+ C + + +L
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 638 KDQNVDRVSLAAL-KNACYESN---KYALFSDLSQRIAEGIG 675
K + + +L K C +N A++ D+ R G+G
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---GVG 628
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++ F + G ++ EM + + T ++ C++G + A ++F EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
+G+ D+ ++ ++ YC+ G + +A R + M+ G + T T LI C +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE--- 469
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
G + A ELL EM + G +PN++T+ +++GLCK G E+A +L + + + T
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVT 528
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
YT ++ YCK +M++A+ +L+ M +GL P T+ L+ G C G E L++ M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
+G PN +N+++ C + ++ A + K R + D TY L+ H K K
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
+A LF M G + + Y+ LI F ++KK E+ + F + GL KE +
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 241/521 (46%), Gaps = 44/521 (8%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++ S + + E + M GL T + ++ + C G ++ A EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
G+ Y ++ +C+ G ++ A+ +++ M+++ T T L+ +C KG
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG-- 486
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
I +A L EM KG P++YT T L+ GL + G A +LF ++ N KPN T
Sbjct: 487 -KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW-NVKPNRVT 544
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
Y MI GYC+E M++A L+ M E+G++P+T +Y LI+G C G A +D +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
K C N Y ++ G C++G+++EA + ++ QR + D + Y +L+ LK + K
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
GL M GL PD YT++I A + KE+ + I G P + TYT++I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA--------------------------- 547
G + G ++ A +M + P+ +TYG
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 548 --------LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
LI G C+Q +++EA + MIG G+SP +T T+ E C++ D A+ +
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 600 LESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLL 636
S+ +K IR NTLI C +G A +++L
Sbjct: 845 WNSMTEK-GIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 41/453 (9%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ + G + + EM N L T ++G C G + A ++ EM +G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ ++ ++ R G + +A + + M + + T ++I +C++G +
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG---DMS 559
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+AFE L+EM KG P+ Y++ LI GLC G +A ++F+ + N + N YT +
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGL 618
Query: 339 ISGYCKEEKMNRA-----EM------------------------------LLERMKEQGL 363
+ G+C+E K+ A EM LL+ M ++GL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 364 LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE 423
P+ YTS+I K G+F+ A+ + DLM EGC PN Y A+I+GLCK G V EA
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 424 LLKKAFQRELQADKITYTILLSEHLK-QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
L K +++TY L K + + ++A+ L ++K GL + Y LI F
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGF 797
Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
CRQ +++E+ + I G+ P TYT+MI R ++ A++ + M + G PD
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
+ Y LI G C ++ +A + M+ +G+ P
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 8/435 (1%)
Query: 173 FSMVIEMTNN----GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKL 228
F + +E+ N+ G+ V+ CEL + A+E+ M A G + Y +
Sbjct: 208 FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNV 267
Query: 229 MVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMV 288
++ C+ +V EA + + D T L+ C + E+++EM+
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ---EFEIGLEMMDEML 324
Query: 289 RKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
+ P+ + L++GL K+G E+A L +K V PN+ Y A+I CK K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNL-VKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
+ AE+L +RM + GL PN TY+ LI C+ G + A + M G ++Y YN++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
I+G CK G + A + + ++L+ +TYT L+ + + + +AL L+ M G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
P I+ +TTL++ R ++++ K F E + P + TY MI GY +G++S A +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
+ + M + G PD +Y LI GLC + EA F + + E+ L + +C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 589 KQGDSATAMIILESL 603
++G A+ + + +
Sbjct: 624 REGKLEEALSVCQEM 638
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 225/479 (46%), Gaps = 12/479 (2%)
Query: 202 GLVEY-----AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAIL 256
GLV++ A E+F++M + G+ D Y ++ + C + ++ A ++ M G +
Sbjct: 201 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260
Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
+ +LI C K + +A + +++ K KP+V T+ L+ GLCK E
Sbjct: 261 NIVPYNVLIDGLCKKQ---KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
+ +++ + P+ ++++ G K K+ A L++R+ + G+ PN Y +LI
Sbjct: 318 EMMDEML-CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
CK F A L D MGK G PN Y+ +ID C++G++ A L + L+
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
Y L++ H K + A G M+ L P + YT+L+ +C + K+ ++ + +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
E G+ P+ T+T+++ G R G I AVK F M + P+ +TY +I G C++
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVN 613
+ +A +F + M KGI P + L + C G ++ A + ++ L K +L
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
L+ C E ++ A +++ + ++D V L + + LF L + + +
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 10/354 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
M+ + E G + + F + EMT G+ T + ++ C G A+ VF + +G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKG 606
Query: 219 VCA-DASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
C + Y ++ +CR G++ EA M+ RG LD +LI R
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR--- 663
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
K F LL+EM +G KP+ +T +ID K G ++AF ++ L+ ++ PN TYTA
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTYTA 722
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL--IYGHCKVGNFERAYDLMDLMGK 395
+I+G CK +N AE+L +M+ +PN TY I +V + ++A +L + + K
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV-DMQKAVELHNAILK 781
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
G N YN +I G C++GR++EA EL+ + + D ITYT +++E ++ + K+
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
A+ L+ M + G+ PD AY TLI C +M ++ + E + GL P +T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
P V T +A++ G K A L M G+ P+ YT +I C++ + RA ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
+ M GC NI YN +IDGLCKK +V EA + K ++L+ D +TY L+ K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
E + L + M+ +P A ++L+ ++ K++E+ + + G+ P
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y ++I + A F RM +IG P+++TY LI C++ KLD A F M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 570 GKGISPCEVTRVTLAYEYCKQGD-SATAMIILESLDKKL--WIRTVNTLIRKLCSEKRVG 626
G+ +L +CK GD SA + E ++KKL + T +L+ CS+ ++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 627 MAALFFHKLLGK 638
A +H++ GK
Sbjct: 490 KALRLYHEMTGK 501
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 14/301 (4%)
Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
+ GN E ++ F G+L+E S+ EM G+ L G+ + L
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY----GVLIDGSL 658
Query: 204 VEYAEEVF----DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
++F EM RG+ D Y M+ A + G EA M++ G + +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT-EKAFRL 318
T T +I C GF + +A L +M PN T+ +D L K +KA L
Sbjct: 719 TYTAVINGLCKAGF---VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
+++ N TY +I G+C++ ++ A L+ RM G+ P+ TYT++I C
Sbjct: 776 HNAILKG--LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
+ + ++A +L + M ++G P+ AYN +I G C G + +A EL + ++ L +
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 439 T 439
T
Sbjct: 894 T 894
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 260/538 (48%), Gaps = 42/538 (7%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++ ++ + +L+E + + G + N ++G +G VE A V+ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
GV + + +MV A C+ G++ + +LS + ++G D T LI+A+ KG
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL- 285
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD-------- 326
+++AFEL+ M KG+ P VYT+ +I+GLCK G E+A +F +++RS
Sbjct: 286 --MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 327 --------------------------NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
+ P++ +++M+S + + +++A M +KE
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
GL+P+ YT LI G+C+ G A +L + M ++GC ++ YN I+ GLCK+ + E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
A +L + +R L D T TIL+ H K + A+ LF +M + + D+ Y TL+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
F + + +++ + + ++ + PT +Y+ ++ G+++ A + + M P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
+ ++I G C+ + F E MI +G P ++ TL Y + ++ + + A ++
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 601 ESLDKKLW-----IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
+ ++++ + T N+++ C + ++ A + K++ + N DR + + N
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 223/447 (49%), Gaps = 6/447 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++S+++ G ++E F ++ M G T N V+ C+ G E A+EVF EM G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ D+++Y+ +++ C+ G V E ++ S M R + D + +++ F G ++
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG---NLD 392
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A + G P+ +T+LI G C+KG A L ++++ +V TY +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTI 451
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
+ G CK + + A+ L M E+ L P++ T T LI GHCK+GN + A +L M ++
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
++ YN ++DG K G + A E+ +E+ I+Y+IL++ + +A
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
++ M+ + P + ++I +CR + E F ++ I+ G P +Y ++I G++
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 519 RDGNISSAVKYFQRMN--QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
R+ N+S A ++M Q G PD TY +++ G C+Q+++ EA MI +G++P
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 577 EVTRVTLAYEYCKQGDSATAMIILESL 603
T + + Q + A I + +
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 224/468 (47%), Gaps = 19/468 (4%)
Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI------- 277
S M+ R GR+++A L M+ R + + L + F + G S+
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 278 -------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
++A E + KG+ ++ LI L + GW E A+ ++ ++ RS
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS-GVGI 233
Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
NV+T M++ CK+ KM + L +++E+G+ P+ TY +LI + G E A++LM
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
+ M +G +P +Y YN +I+GLCK G+ + A E+ + + L D TY LL E K+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
+ + +F M + PD+ ++++++ F R + ++ +F AGL P Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
T +I GY R G IS A+ M Q GCA D +TY ++ GLCK+ L EA + + M
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 571 KGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGM 627
+ + P T L +CK G+ AM + + + +K L + T NTL+ +
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 628 AALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
A + ++ K+ +S + L NA C + + F + I++ I
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 158/379 (41%), Gaps = 55/379 (14%)
Query: 327 NYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA 386
N+K + +AMI + +++ A+ L RM + + SL G+ +
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 387 YDLM---------------------------------DLMG------------------- 394
+DL+ L+G
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
+ G N+Y N +++ LCK G++++ L + ++ + D +TY L+S + + +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
+A L M G +P ++ Y T+I C+ K + +++ F E + +GL P TY S++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
+ G++ K F M PD + + +++S + LD+A ++ S+ G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALF 631
P V L YC++G + AM + + ++ + + T NT++ LC K +G A
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 632 FHKLLGKDQNVDRVSLAAL 650
F+++ + D +L L
Sbjct: 468 FNEMTERALFPDSYTLTIL 486
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 233/481 (48%), Gaps = 20/481 (4%)
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
+M + +P T V+ C + ++ A + +M G ++ Y+ ++ + +
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
RV EA + L M G + D T +I C I +A +++ M+ +G+ P+
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCK---FDRINEAAKMVNRMLIRGFAPDDI 323
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
T+ L++GLCK G + A LF ++ KP + + +I G+ +++ A+ +L
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 358 M-KEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKG 416
M G++P+ TY SLIYG+ K G A +++ M +GC PN+Y+Y ++DG CK G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
++ EAY +L + L+ + + + L+S K+ +A+ +F M + G PD++ +
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
+LI+ C ++K + ++ I+ G+ TY ++I +LR G I A K M
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
G D ITY +LI GLC+ ++D+A +E M+ G +P ++ L C+ G A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 597 MIILESLDKKLWIR-------TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAA 649
+ K++ +R T N+LI LC R+ F KL + D V+
Sbjct: 619 V----EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 650 L 650
L
Sbjct: 675 L 675
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 227/465 (48%), Gaps = 10/465 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ +F + + S++ +MT +G + ++ + V A ++ +EM G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
DA ++ +++ C+ R+ EA + ++ ML RG D+ T L+ C G + K
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
F + KP + LI G G + A + +V S P+V TY ++
Sbjct: 343 DLFYRIP-------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I GY KE + A +L M+ +G PN +YT L+ G CK+G + AY++++ M +G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PN +N +I CK+ R+ EA E+ ++ ++ + D T+ L+S + E K AL
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
L M+ G+ + Y TLI AF R+ ++KE+ K E + G + TY S+I G
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
R G + A F++M + G AP NI+ LI+GLC+ ++EA +F + M+ +G +P V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 579 TRVTLAYEYCKQG---DSATAMIILESLDKKLWIRTVNTLIRKLC 620
T +L C+ G D T L++ T NTL+ LC
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 219/448 (48%), Gaps = 9/448 (2%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
+ Q ++ S ++ R+ E ++ EM G T N V+ C+ + A ++ + M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
RG D +Y ++ C++GRV A + ++ N + +T
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT-------H 366
Query: 275 GSIKQAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
G + A +L +MV G P+V T+ LI G K+G A + L +R+ KPNV+
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV-LHDMRNKGCKPNVY 425
Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
+YT ++ G+CK K++ A +L M GL PNT + LI CK A ++ M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
++GC P++Y +N++I GLC+ ++ A LL+ + A+ +TY L++ L++ E
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
K+A L MV G D Y +LI CR ++ ++ F++ + G P+ + +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
I G R G + AV++ + M G PD +T+ +LI+GLC+ ++++ + + +GI
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILE 601
P VT TL CK G A ++L+
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 221/520 (42%), Gaps = 25/520 (4%)
Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
S + + +V Q ++ G K ++I+M + G+ S ++ + G
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 205 EYAEEVFDEMCARGVCADASSYK-------LMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
+ EM R V + ++K ++V C A ML R
Sbjct: 163 GQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPT 216
Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
T +++ AFC I A LL +M + G PN + LI L K +A +
Sbjct: 217 LFTFGVVMKAFCAVN---EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
L ++ P+ T+ +I G CK +++N A ++ RM +G P+ TY L+ G
Sbjct: 274 LLEEMFLM-GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR-ELQAD 436
CK+G + A DL + K P I +N +I G GR+ +A +L + D
Sbjct: 333 CKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
TY L+ + K+ AL + M G P++++YT L+ FC+ K+ E+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
E GL P + +I + ++ I AV+ F+ M + GC PD T+ +LISGLC+
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVN 613
++ A MI +G+ VT TL + ++G+ A ++ + L T N
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
+LI+ LC V A F K+L +S L N
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 233/468 (49%), Gaps = 14/468 (2%)
Query: 142 SLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIAC 199
+++ +GN +++ C ++ F +G+ ++ ++ + +G T N ++ C
Sbjct: 127 NMVYHGNVP---DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 200 ELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNA 259
+ G + A V D M V D +Y ++ + C G++ +A L ML R D
Sbjct: 184 KAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 260 TLTLLITAFC-DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
T T+LI A C D G + A +LL+EM +G P+V T+ VL++G+CK+G ++A +
Sbjct: 241 TYTILIEATCRDSG----VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK- 295
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
FL + S +PNV T+ ++ C + AE LL M +G P+ T+ LI C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
+ G RA D+++ M + GC PN +YN ++ G CK+ ++ A E L++ R D +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
TY +L+ K + + A+ + ++ G +P + Y T+I + K ++ K E
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
L P TY+S++ G R+G + A+K+F ++G P+ +T+ +++ GLCK +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK 606
D A F MI +G P E + L +G + A+ +L L K
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 207/415 (49%), Gaps = 7/415 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
M+S + + G + S++ M+ + P + T N ++ C+ G ++ A EV D M R
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS--PDVV-TYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D +Y +++ A CR V A + L M DRG D T +L+ C +G +
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG---RLD 291
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A + L +M G +PNV TH +++ +C G A +L ++R + P+V T+ +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNIL 350
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I+ C++ + RA +LE+M + G PN+ +Y L++G CK +RA + ++ M GC
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+I YN ++ LCK G+V++A E+L + + ITY ++ K +T +A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
L M L PD Y++L+ R+ K+ E+ KFF E G+ P T+ S++ G
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
+ A+ + M GC P+ +Y LI GL + EA + + KG+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 215/435 (49%), Gaps = 12/435 (2%)
Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
G +E + + M G D ++ +CR+G+ +A + L + GA+ D T
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
++I+ +C G I A +L+ M P+V T+ ++ LC G ++A + +
Sbjct: 176 NVMISGYCKAG---EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
+++ D Y P+V TYT +I C++ + A LL+ M+++G P+ TY L+ G CK G
Sbjct: 230 MLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
+ A ++ M GC PN+ +N I+ +C GR +A +LL ++ +T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
IL++ ++ +A+ + +M + G P+ +Y L+ FC++KKM + ++ + ++
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
G +P TY +M+ +DG + AV+ +++ GC+P ITY +I GL K K +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 562 CQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIR 617
+ + M K + P +T +L ++G A+ + ++ IR T N+++
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGIRPNAVTFNSIML 527
Query: 618 KLCSEKRVGMAALFF 632
LC ++ A F
Sbjct: 528 GLCKSRQTDRAIDFL 542
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
T N ++ C+ G VE A E+ +++ ++G +Y ++ + G+ +A + L M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
+ D T + L+ +G + +A + E R G +PN T ++ GLCK
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREG---KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
T++A FL + + KPN +YT +I G E A LL + +GL+
Sbjct: 533 RQTDRAID-FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
+R G + K+ + M G PD I LI G C+ K +A + E + G G P
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
+T + YCK G+ A+ +L+ + + T NT++R LC ++ A ++L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 638 KDQNVDRVSLAALKNA-CYES 657
+D D ++ L A C +S
Sbjct: 233 RDCYPDVITYTILIEATCRDS 253
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 224/492 (45%), Gaps = 71/492 (14%)
Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
S+ N VV C+LG V++AE++ M G D SY ++ +CR G + A L +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 249 ---------------------------MLDR-----GAIL-----DNATLTLLITAFCDK 271
MLD G +L + T + I FC
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
G ++ A + M R PNV T T LIDG CK G E A L+ K +R N
Sbjct: 177 ---GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY-KEMRRVRMSLN 232
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
V TYTA+I G+CK+ +M RAE + RM E + PN+ YT++I G + G+ + A +
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G +I AY II GLC G+++EA E+++ + +L D + +T +++ + K
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 452 ETKQALGLFCRMVKAGLNPDIHA------------------------------YTTLIAA 481
K A+ ++ ++++ G PD+ A YT LI A
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
C++ E E+ F + AGL P K YTS I G + GN+ A K RM Q G D
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
+ Y LI GL + + EA Q ++ M+ GISP L Y K+G+ A A +L
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 602 SLDKKLWIRTVN 613
+ ++ + V+
Sbjct: 533 DMQRRGLVTAVS 544
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 184/382 (48%), Gaps = 13/382 (3%)
Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
+ +RG SS+ +V C++G+V A+ + +M G D + LI C G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNG- 105
Query: 274 RGSIKQAFELLEEM-VRKGW--KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
I+ A +LE + G+ KP++ + L +G K ++ F +++ P
Sbjct: 106 --DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC--CSP 161
Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
NV TY+ I +CK ++ A MK L PN T+T LI G+CK G+ E A L
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
M + + N+ Y A+IDG CKKG +Q A E+ + + ++ + + YT ++ ++
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETY 510
++ A+ +M+ G+ DI AY +I+ C K+KE+ + ++ + L P +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 511 TSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIG 570
T+M+ Y + G + +AV + ++ + G PD + +I G+ K +L EA ++ I
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIE 399
Query: 571 KGISPCEVTRVTLAYEYCKQGD 592
K +V L CK+GD
Sbjct: 400 KA---NDVMYTVLIDALCKEGD 418
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 179/359 (49%), Gaps = 8/359 (2%)
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
+ + L +V +G+ P+ + ++ +CK G + A + + R +P+V +Y ++I
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRF-GCEPDVISYNSLI 98
Query: 340 SGYCKEEKMNRAEMLLERMK-EQGLL--PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
G+C+ + A ++LE ++ G + P+ ++ SL G K+ + + M +M K
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK- 157
Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
C+PN+ Y+ ID CK G +Q A + + L + +T+T L+ + K + + A
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
+ L+ M + ++ ++ YT LI FC++ +M+ +E+ + + + P YT++I G
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
+ + G+ +A+K+ +M G D YG +ISGLC KL EA + E M + P
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFF 632
V T+ Y K G A+ + L ++ + + ++T+I + ++ A ++F
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 30/321 (9%)
Query: 133 MRLYIVCATSLISN----GNFERAHE---------------VMQCMVSSFAEIGRLKEGF 173
M L +V T+LI G +RA E V ++ F + G
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 174 SMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
+ +M N G+ L + ++ C G ++ A E+ ++M + D + M+ AY
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW- 292
+ GR+ A +++RG D L+ +I G +L E +V
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG---------QLHEAIVYFCIE 399
Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
K N +TVLID LCK+G + RLF K+ + P+ YT+ I+G CK+ + A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEA-GLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
L RM ++GLL + YT+LIYG G A + D M G +P+ ++ +I
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 413 CKKGRVQEAYELLKKAFQREL 433
K+G + A +LL +R L
Sbjct: 519 EKEGNMAAASDLLLDMQRRGL 539
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 50/296 (16%)
Query: 351 AEMLLERMKEQGLLPNTNTYT----SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
A L R+++ LP+ T LI +C + + + + + G TP+ ++N
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHRSSFN 60
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+++ +CK G+V+ A +++ M +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHS-----------------------------------MPRF 85
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF---PTKETYTSMICGYLRDGNI 523
G PD+ +Y +LI CR ++ + + + F P ++ S+ G+ + +
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145
Query: 524 SSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
Y M + C+P+ +TY I CK +L A + + SM +SP VT L
Sbjct: 146 DEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 584 AYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLL 636
YCK GD A+ + + + + L + T LI C + + A + +++
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPL-ITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ + G L + F + M GL L + + + G+A + GL+ A +VFDEM G
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK-GLMVEARQVFDEMLNSG 503
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
+ D++ + L++ AY + G + A L M RG +
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 272/593 (45%), Gaps = 30/593 (5%)
Query: 74 YQQFHLRSSPPRLNLQIDIDSLTHEQAIT-----VVASLANEAGSMVALSFFYWAIGFAK 128
+ F L +PP + + H A++ ++ SL ++ AL F A
Sbjct: 22 HHSFSLNLTPPSSTISF---ASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPN 78
Query: 129 FRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGR---------------LKEGF 173
F LY L +G+F+ ++++ M SS E+G E
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 174 SMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVA 232
S+V M + GL T NR++ + + ++ E +M G+ D S++ +++ A
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 233 YCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW 292
CR ++ A L M G + D T T ++ + ++G + A + E+MV G
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG---DLDGALRIREQMVEFGC 255
Query: 293 KPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAE 352
+ + V++ G CK+G E A ++ D + P+ +T+ +++G CK + A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 353 MLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
+++ M ++G P+ TY S+I G CK+G + A +++D M C+PN YN +I L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 413 CKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDI 472
CK+ +V+EA EL + + + D T+ L+ + A+ LF M G PD
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Query: 473 HAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQR 532
Y LI + C + K+ E+ ++ +G + TY ++I G+ + A + F
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 533 MNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGD 592
M G + +++TY LI GLCK ++++A Q + MI +G P + T +L +C+ GD
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 593 SATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
A I++++ + I T TLI LC RV +A+ + K N+
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 205/463 (44%), Gaps = 40/463 (8%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ + +L+ M+ +M + GL T V+ E G ++ A + ++M G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDR-GAILDNATLTLLITAFCDKGFRGSI 277
S ++V +C+ GRV +A ++ M ++ G D T L+ C G +
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG---HV 311
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
K A E+++ M+++G+ P+VYT+ +I GLCK G ++A + +++ D PN TY
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNT 370
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+IS CKE ++ A L + +G+LP+ T+ SLI G C N A +L + M +G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 398 CTPN-----------------------------------IYAYNAIIDGLCKKGRVQEAY 422
C P+ + YN +IDG CK + +EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
E+ + + + +TY L+ K + A L +M+ G PD + Y +L+ F
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
CR +K++ Q + G P TY ++I G + G + A K + + G
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
Y +I GL ++ K EA + M+ + +P + + +
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 5/364 (1%)
Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
G KP+V T VLI LC+ A L L+ + S P+ T+T ++ GY +E ++
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM-GKEGCTPNIYAYNAII 409
A + E+M E G + + +++G CK G E A + + M ++G P+ Y +N ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
+GLCK G V+ A E++ Q D TY ++S K E K+A+ + +M+ +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
P+ Y TLI+ C++ +++E+ + + + G+ P T+ S+I G N A++
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
F+ M GC PD TY LI LC + KLDEA + M G + +T TL +CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
+ A I + ++ R T NTLI LC +RV AA +++ + Q D+ +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 647 LAAL 650
+L
Sbjct: 543 YNSL 546
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F G +K+ +V MT+NG T ++ C+ G VE A ++ + +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG-AILDNATLTLLITAFCDKGFRGSI 277
+ +Y ++ R + TEA ML++ A D + ++ C+ G G I
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG--GPI 663
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
++A + L E++ KG+ P + +L +GL E +L +++ + +
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS---EEEVS 720
Query: 338 MISGYCKEEKMNRA 351
M+ G K K A
Sbjct: 721 MVKGLLKIRKFQDA 734
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 212/417 (50%), Gaps = 11/417 (2%)
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-DKGFR 274
A V D +Y +++ CR GR+ L ++ +G +D T L+ C DK
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK--- 136
Query: 275 GSIKQAFEL-LEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV--RSDNYKPN 331
A ++ L M G PNV+++ +L+ GLC + +++A L + R P+
Sbjct: 137 -RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPD 195
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
V +YT +I+G+ KE ++A M ++G+LP+ TY S+I CK ++A ++++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M K G P+ YN+I+ G C G+ +EA LKK ++ D +TY++L+ K
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+A +F M K GL P+I Y TL+ + + + E + G+ P ++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
+IC Y + G + A+ F +M Q G P+ +TYGA+I LCK ++++A ++E MI +
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 572 GISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRTV--NTLIRKLCSEKRV 625
G+SP + +L + C A +ILE LD+ + + T+ N++I C E RV
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 229/477 (48%), Gaps = 7/477 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F + G + +S EM + G+ T N ++ C+ ++ A EV + M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V D +Y ++ YC G+ EA +L M G D T +LL+ C G
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG---RCM 318
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A ++ + M ++G KP + T+ L+ G KG + L +VR + P+ + ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSIL 377
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I Y K+ K+++A ++ +M++QGL PN TY ++I CK G E A + M EG
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+P YN++I GLC + + A EL+ + R + + I + ++ H K+ ++
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LF MV+ G+ P++ Y TLI +C KM E+ K ++ GL P TY+++I GY
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ + A+ F+ M G +PD ITY ++ GL + + A + Y + G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFF 632
T + + CK + A+ + ++L D KL RT N +I L R A F
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 206/421 (48%), Gaps = 7/421 (1%)
Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
G D SY ++ + + G +A MLDRG + D T +I A C ++
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ---AM 247
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
+A E+L MV+ G P+ T+ ++ G C G ++A FLK +RSD +P+V TY+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG-FLKKMRSDGVEPDVVTYSL 306
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
++ CK + A + + M ++GL P TY +L+ G+ G + L+DLM + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
P+ Y ++ +I K+G+V +A + K Q+ L + +TY ++ K + A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
F +M+ GL+P Y +LI C K + +E+ E + G+ + S+I +
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
++G + + K F+ M +IG P+ ITY LI+G C K+DEA + M+ G+ P
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 578 VTRVTLAYEYCKQGDSATAMII---LESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
VT TL YCK A+++ +ES I T N +++ L +R A + +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 635 L 635
+
Sbjct: 607 I 607
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 219/472 (46%), Gaps = 26/472 (5%)
Query: 149 FERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLITSTLNR 193
++A EV+ MV + + G+ KE + +M ++G+ T +
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
++ C+ G A ++FD M RG+ + ++Y ++ Y G + E L M+ G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
D+ ++LI A+ +G + QA + +M ++G PN T+ +I LCK G E
Sbjct: 367 IHPDHYVFSILICAYAKQG---KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
A F +++ + P Y ++I G C K RAE L+ M ++G+ NT + S+
Sbjct: 424 DAMLYFEQMI-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
I HCK G + L +LM + G PN+ YN +I+G C G++ EA +LL L
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
+ + +TY+ L++ + K + + AL LF M +G++PDI Y ++ + ++ +++
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
+ +G TY ++ G ++ A++ FQ + + + T+ +I L
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 554 KQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
K + DEA + + G+ P T +A QG +LE LD+
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG-------LLEELDQ 707
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 181/393 (46%), Gaps = 5/393 (1%)
Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
++ NG H V ++ ++A+ G++ + + +M GL T V+GI C+ G
Sbjct: 362 MVRNG-IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
VE A F++M G+ Y ++ C + A+ + MLDRG L+
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
+I + C + G + ++ +L E MVR G KPNV T+ LI+G C G ++A +L +
Sbjct: 481 SIIDSHCKE---GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
V S KPN TY+ +I+GYCK +M A +L + M+ G+ P+ TY ++ G +
Sbjct: 538 V-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
A +L + + G + YN I+ GLCK +A ++ + +L+ + T+ I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
++ LK +A LF GL P+ Y + Q ++E ++ F G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQ 535
++ L+ G I+ A Y +++
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 184/398 (46%), Gaps = 13/398 (3%)
Query: 274 RGSIKQAFELLEEMVRKGWK---PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKP 330
R S A M R G P++ T+ +LI C+ G + F +++ ++
Sbjct: 62 RDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKK-GFRV 120
Query: 331 NVHTYTAMISGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
+ +T ++ G C +++ + A +++L RM E G +PN +Y L+ G C + A +L
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180
Query: 390 MDLMGKE---GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
+ +M + G P++ +Y +I+G K+G +AY + R + D +TY +++
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240
Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
K +A+ + MVK G+ PD Y +++ +C + KE+ F ++ + G+ P
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 507 KETYTSMICGYL-RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
TY S++ YL ++G A K F M + G P+ TYG L+ G + L E
Sbjct: 301 VVTY-SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSE 622
+ M+ GI P L Y KQG AM++ + ++ T +I LC
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY 660
RV A L+F +++ + + + +L + NK+
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 39/306 (12%)
Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
+++EM + G+ L T N ++ C+ G V +E++F+ M GV + +Y ++ YC
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
G++ EA + LS M+ G + T + LI +C ++ A L +EM G P
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS---RMEDALVLFKEMESSGVSP 579
Query: 295 NVYTHTVLIDGL-----------------------------------CKKGWTEKAFRLF 319
++ T+ +++ GL CK T+ A ++F
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
L D K T+ MI K + + A+ L GL+PN TY +
Sbjct: 640 QNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
G E L M GCT + N I+ L ++G + A L ++ + T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Query: 440 YTILLS 445
++ +
Sbjct: 759 ASLFID 764
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 218/426 (51%), Gaps = 7/426 (1%)
Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
+M +G+ + + +M+ +CR ++ A + ++ G + T + LI C
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC--- 169
Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
G + +A EL++ MV G KP++ T L++GLC G +A L K+V +PN
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNA 228
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
TY +++ CK + A LL +M+E+ + + Y+ +I G CK G+ + A++L +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M +G T NI YN +I G C GR + +LL+ +R++ + +T+++L+ +K+ +
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
++A L M+ G+ PD YT+LI FC++ + ++ + ++ G P T+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
+I GY + I ++ F++M+ G D +TY LI G C+ KL+ A + ++ M+ +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
+ P VT L C G+S A+ I E ++K +L I N +I +C+ +V A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 630 LFFHKL 635
F L
Sbjct: 529 DLFCSL 534
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 206/439 (46%), Gaps = 4/439 (0%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
GR+ E +V M G T+N +V C G A + D+M G +A +Y
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
++ C+ G+ A L M +R LD +++I C GS+ AF L E
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK---HGSLDNAFNLFNE 288
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M KG N+ T+ +LI G C G + +L +++ PNV T++ +I + KE
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEG 347
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K+ AE L + M +G+ P+T TYTSLI G CK + ++A ++DLM +GC PNI +N
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+I+G CK R+ + EL +K R + AD +TY L+ + + A LF MV
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
+ P+I Y L+ C + +++ + F++ + + Y +I G + A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
F + G P TY +I GLCK+ L EA + M G +P T L
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 587 YCKQGDSATAMIILESLDK 605
+ GD+ ++ ++E L +
Sbjct: 588 HLGDGDATKSVKLIEELKR 606
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 192/365 (52%), Gaps = 8/365 (2%)
Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
C+ G ++ A +F+EM +G+ + +Y +++ +C GR + + L M+ R +
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
T ++LI +F +G +++A EL +EM+ +G P+ T+T LIDG CK+ +KA ++
Sbjct: 334 VTFSVLIDSFVKEG---KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
+ L+ S PN+ T+ +I+GYCK +++ L +M +G++ +T TY +LI G C
Sbjct: 391 -VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
++G A +L M PNI Y ++DGLC G ++A E+ +K + +++ D
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
Y I++ ++ A LFC + G+ P + Y +I C++ + E+E F++
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----SGLCK 554
G P TY +I +L DG+ + +VK + + + G + D T +I G K
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLK 629
Query: 555 QSKLD 559
+S LD
Sbjct: 630 KSFLD 634
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 191/394 (48%), Gaps = 4/394 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +V+ G+ E ++ +M G T V+ + C+ G A E+ +M
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
R + DA Y +++ C+ G + A + M +G + T +LI FC+ G
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG--- 312
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
+LL +M+++ PNV T +VLID K+G +A L +++ P+ TY
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITY 371
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
T++I G+CKE +++A +++ M +G PN T+ LI G+CK + +L M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
G + YN +I G C+ G++ A EL ++ R++ + +TY ILL E+++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
AL +F ++ K+ + DI Y +I C K+ ++ F G+ P +TY MI
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
G + G +S A F++M + G APD TY LI
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 215/473 (45%), Gaps = 13/473 (2%)
Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
AH + + M++ F +L FS + ++ G T T + ++ C G V A E
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
+ D M G D + +V C G+ EA + M++ G + T ++ C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
G A ELL +M + K + ++++IDGLCK G + AF LF ++
Sbjct: 240 KSG---QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGIT 295
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
N+ TY +I G+C + + LL M ++ + PN T++ LI K G A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
M G P+ Y ++IDG CK+ + +A +++ + + T+ IL++ + K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
L LF +M G+ D Y TLI FC K+ +++ FQE ++ + P T
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y ++ G +G A++ F+++ + D Y +I G+C SK+D+A + S+
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK-----KLWIRTVNTLIR 617
KG+ P T + CK+G + A ++ +++ W T N LIR
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW--TYNILIR 586
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 33/389 (8%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L ++M KG N+YT +++I+ C+ AF K+++ Y+PN T++ +I+G
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGL 168
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C E +++ A L++RM E G P+ T +L+ G C G A L+D M + GC PN
Sbjct: 169 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
Y +++ +CK G+ A ELL+K +R ++ D + Y+I++ K A LF
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M G+ +I Y LI FC + + K ++ I + P T++ +I ++++G
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ A + + M G APD ITY +LI G CK++ LD+A Q + M+ KG P
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP------- 401
Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
IRT N LI C R+ F K+ +
Sbjct: 402 -------------------------NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 643 DRVSLAALKNACYESNKYALFSDLSQRIA 671
D V+ L E K + +L Q +
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
+ +A +L + I ++ L S K + L L +M G+ +++ +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
+I FCR +K+ + + I G P T++++I G +G +S A++ RM ++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
G PD IT L++GLC K EA + M+ G P VT + CK G +A A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 597 MIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
M +L +++ KL + +I LC + A F+++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 114/279 (40%), Gaps = 3/279 (1%)
Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
+ A DL M P + ++ + + K + L K+ + + + T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
++ + + A +++K G P+ ++TLI C + ++ E+ + + G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
P T +++ G G + A+ +M + GC P+ +TYG +++ +CK + A +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLC 620
M + I V + CK G A + ++ K I T N LI C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
+ R A ++ + N + V+ + L ++ + K
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 32/235 (13%)
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
++Y L L + A+ LF M+ + P + ++ L +A + K+ ++
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
G+ T + MI + R + A ++ ++G P+ IT+ LI+GLC + +
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
+ EA + + M+ G P +T +NTL+
Sbjct: 174 VSEALELVDRMVEMGHKPDLIT--------------------------------INTLVN 201
Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
LC + A L K++ + V+ + N +S + AL +L +++ E
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
Y + L NG E+A E+ F +I + K + L N ++
Sbjct: 476 YKILLDGLCDNGESEKALEI-------FEKIEKSK-------------MELDIGIYNIII 515
Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
C V+ A ++F + +GV +Y +M+ C+ G ++EA+ M + G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKA 315
D T +LI A G ++ +L+EE+ R G+ + T ++ID L G +K+
Sbjct: 576 PDGWTYNILIRAHLGD---GDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631
Query: 316 F 316
F
Sbjct: 632 F 632
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 243/522 (46%), Gaps = 23/522 (4%)
Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
Y + L+ +G F++AH+V M + SF + R ++ M+
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
+ G + VVG E E+F +M A GV S++ ++ C+ G V
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
E ++ L ++ RG + + T L I C RG + A ++ ++ +G KP+V T+
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ---RGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
LI GLCK ++A ++L + ++ +P+ +TY +I+GYCK + AE ++
Sbjct: 291 NLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
G +P+ TY SLI G C G RA L + +G PN+ YN +I GL +G + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIA 480
A +L + ++ L + T+ IL++ K A GL M+ G PDI + LI
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 481 AFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAP 540
+ Q KM+ + + + G+ P TY S++ G + ++ ++ M + GCAP
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
+ T+ L+ LC+ KLDEA E M K ++P VT TL +CK GD A +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 601 ESLDKKLWIR----TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
+++ + T N +I + V MA F +++ +
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/584 (24%), Positives = 258/584 (44%), Gaps = 52/584 (8%)
Query: 103 VVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCM--- 159
V A + + M AL F F+H + Y L G FE EV+ M
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 160 -------------VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEY 206
+ ++ G+++E ++ M + N ++ + + G +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
A +V+ M RG+ D S+ + + ++C+ R A R L+ M +G ++ ++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 267 AFCDKGF--------------------------------RGSIKQAFELLEEMVRKGWKP 294
F ++ F +G +K+ +LL++++++G P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
N++T+ + I GLC++G + A R+ L+ KP+V TY +I G CK K AE+
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
L +M +GL P++ TY +LI G+CK G + A ++ G P+ + Y ++IDGLC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
+G A L +A + ++ + I Y L+ Q +A L M + GL P++
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
+ L+ C+ + +++ + I+ G FP T+ +I GY + +A++ M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
G PD TY +L++GLCK SK ++ + Y++M+ KG +P T L C+
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 595 TAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
A+ +LE + K T TLI C + A F K+
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 249/563 (44%), Gaps = 60/563 (10%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V F E EG+ + +M +G+ L ST N+++ + C+ G V+ E++ D++ RG
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V + +Y L + C+ G + A R + ++++G D T LI C +
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK---NSKFQ 303
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A L +MV +G +P+ YT+ LI G CK G + A R+ V + + P+ TY ++
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV-FNGFVPDQFTYRSL 362
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G C E + NRA L +G+ PN Y +LI G G A L + M ++G
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P + +N +++GLCK G V +A L+K + D T+ IL+ + Q + + AL
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ M+ G++PD++ Y +L+ C+ K ++ + ++ + G P T+ ++
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC---------------- 562
R + A+ + M PD +T+G LI G CK LD A
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 563 --------------------QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
+ ++ M+ + + P T + +CK G+ L
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 603 LDKKLWIRTVNTL---IRKLCSEKRVGMAALFFHKLLGKDQ---------NVDRVSLAA- 649
+ + +I ++ TL I LC E RV AA H+++ K +VD+ +AA
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAP 722
Query: 650 -------LKNACYESNKYALFSD 665
LK +C Y L D
Sbjct: 723 KLVLEDLLKKSCITYYAYELLFD 745
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 4/364 (1%)
Query: 279 QAFELLEEMVRK-GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
+A E+ M ++ G+K + T+ +I+ L G E + + + + Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+ Y ++ K+ A + ERM P +Y +++ G F++A+ + M G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
TP++Y++ + CK R A LL + + + + Y ++ ++ +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
LF +M+ +G++ + + L+ C++ +KE EK + I G+ P TY I G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
+ G + AV+ + + G PD ITY LI GLCK SK EA + M+ +G+ P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHK 634
T TL YCK G A I+ ++ T +LI LC E A F++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 635 LLGK 638
LGK
Sbjct: 382 ALGK 385
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 224/438 (51%), Gaps = 7/438 (1%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
N+++ ++ E + ++M G+ D +Y + + +CR +++ A L+ M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
G D TL+ L+ +C I A L+++MV G+KP+ +T T LI GL
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSK---RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
+A L ++V+ +P++ TY +++G CK ++ A LL++M++ + + Y
Sbjct: 203 KASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
++I G CK + + A +L M +G P+++ Y+++I LC GR +A LL +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
R++ + +T++ L+ +K+ + +A L+ M+K ++PDI Y++LI FC ++ E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
++ F+ I+ FP TY+++I G+ + + ++ F+ M+Q G + +TY LI
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW-- 608
G + D A ++ M+ G+ P +T L CK G A AM++ E L +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 609 -IRTVNTLIRKLCSEKRV 625
I T N +I +C +V
Sbjct: 502 DIYTYNIMIEGMCKAGKV 519
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 213/403 (52%), Gaps = 5/403 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G + S++ +M + N ++ C+ ++ A +F EM +G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ D +Y ++ C GR ++A R LS M++R + T + LI AF +G +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLV 345
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +EM+++ P+++T++ LI+G C ++A +F ++ D + PNV TY+ +
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTL 404
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G+CK +++ L M ++GL+ NT TYT+LI+G + + + A + M G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PNI YN ++DGLCK G++ +A + + + ++ D TY I++ K + +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LFC + G++P++ AY T+I+ FCR+ +E++ ++ G P TY ++I L
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
RDG+ ++ + + M G A D T G L++ + +LD++
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 210/448 (46%), Gaps = 7/448 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +++ + R+ + ++V +M G T T ++ A + D+M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR 274
RG D +Y +V C+ G + A L M ++G I D +I C
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK---Y 271
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
+ A L EM KG +P+V+T++ LI LC G A RL ++ PNV T
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVT 330
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
++A+I + KE K+ AE L + M ++ + P+ TY+SLI G C + A + +LM
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
+ C PN+ Y+ +I G CK RV+E EL ++ QR L + +TYT L+ + +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
A +F +MV G++P+I Y L+ C+ K+ ++ F+ + + P TY MI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
G + G + + F ++ G +P+ I Y +ISG C++ +EA + M G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 575 PCEVTRVTLAYEYCKQGD-SATAMIILE 601
P T TL + GD A+A +I E
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 188/363 (51%), Gaps = 8/363 (2%)
Query: 281 FELL----EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
FEL+ E+M G ++YT+++ I+ C++ A + K+++ Y+P++ T +
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLS 157
Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
++++GYC ++++ A L+++M E G P+T T+T+LI+G A L+D M +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
GC P++ Y +++GLCK+G + A LLKK + +++AD + Y ++ K A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
L LF M G+ PD+ Y++LI+ C + ++ + + I + P T++++I
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
++++G + A K + M + PD TY +LI+G C +LDEA +E MI K P
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFH 633
VT TL +CK M + + ++ + T TLI + A + F
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 634 KLL 636
+++
Sbjct: 458 QMV 460
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 223/461 (48%), Gaps = 7/461 (1%)
Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
++ F +L +++ +M G TL+ ++ C + A + D+M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
D ++ ++ + +EA + M+ RG D T ++ C RG I
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK---RGDIDL 241
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
A LL++M + + +V + +IDGLCK + A LF ++ + +P+V TY+++I
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLI 300
Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
S C + + A LL M E+ + PN T+++LI K G A L D M K
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
P+I+ Y+++I+G C R+ EA + + ++ + +TY+ L+ K ++ + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
F M + GL + YTTLI F + + ++ F++ ++ G+ P TY ++ G +
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
+G ++ A+ F+ + + PD TY +I G+CK K+++ + + ++ KG+SP +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
T+ +C++G A +L+ + + + T NTLIR
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 166/367 (45%), Gaps = 12/367 (3%)
Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
+ A LF +V+S + P++ + ++S K K L E+M+ G+ + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
I C+ A ++ M K G P+I +++++G C R+ +A L+ + +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
+ D T+T L+ + +A+ L +MV+ G PD+ Y T++ C++ + +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
++ + Y ++I G + ++ A+ F M+ G PD TY +LIS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKK 606
LC + +A + MI + I+P VT L + K+G A +I S+D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----AL 662
++ T ++LI C R+ A F ++ KD + V+ + L ++ + L
Sbjct: 363 IF--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 663 FSDLSQR 669
F ++SQR
Sbjct: 421 FREMSQR 427
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 3/310 (0%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K++ A L M + P+ + L+ K+ FE L + M G + ++Y Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
I+ C++ ++ A +L K + + D +T + LL+ + A+ L +MV+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G PD +TTLI K E+ + + G P TY +++ G + G+I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
+ ++M + D + Y +I GLCK +D+A + M KGI P T +L
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 587 YCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
C G + A +L + +++K+ + T + LI E ++ A + +++ + + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 644 RVSLAALKNA 653
+ ++L N
Sbjct: 363 IFTYSSLING 372
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 216/454 (47%), Gaps = 41/454 (9%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ F E L++ + EM +G T ++ C+ G ++ A EM G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ AD Y ++ +C G + +L+RG T LI FC G +K
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---LGQLK 299
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A E+ E M+ +G +PNVYT+T LIDGLC G T++A +L ++ D +PN TY +
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNII 358
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG- 397
I+ CK+ + A ++E MK++ P+ TY L+ G C G+ + A L+ LM K+
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 398 -CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
P++ +YNA+I GLCK+ R+ +A ++ ++ D++T ILL+ LK + +A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 457 L-----------------------------------GLFCRMVKAGLNPDIHAYTTLIAA 481
+ GL C+M + L P + Y L+++
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD 541
C++ + ++ + F+E FP ++ MI G L+ G+I SA M++ G +PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 542 NITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
TY LI+ K LDEA F++ M+ G P
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 221/486 (45%), Gaps = 38/486 (7%)
Query: 107 LANE-AGSMVALSFFYW---------------AIGFAKFRHFMRLY--IVCATSLISNGN 148
LANE GS + S W A+GF K FM L +V TSLI
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR--- 255
Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
F + G L G ++ E+ G T N ++ C+LG ++ A
Sbjct: 256 -------------GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
E+F+ M RGV + +Y ++ C +G+ EA + L+ M+++ + T ++I
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
C G + A E++E M ++ +P+ T+ +L+ GLC KG ++A +L +++ +Y
Sbjct: 363 CKDGL---VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 329 -KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
P+V +Y A+I G CKE ++++A + + + E+ + T L+ K G+ +A
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
+L + N Y A+IDG CK G + A LL K ELQ Y LLS
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
K+ QA LF M + PD+ ++ +I + +K +E AGL P
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
TY+ +I +L+ G + A+ +F +M G PD +++ Q + D+ + +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
Query: 568 MIGKGI 573
++ K I
Sbjct: 660 LVDKDI 665
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 209/471 (44%), Gaps = 46/471 (9%)
Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLIT 266
A + EM + D SY ++ +C + +A + M G T +LI
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 267 AFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV-RS 325
AFC G + +A L+EM G + ++ +T LI G C G ++ LF +++ R
Sbjct: 221 AFCKA---GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
D+ P TY +I G+CK ++ A + E M E+G+ PN TYT LI G C VG +
Sbjct: 278 DS--PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
A L++LM ++ PN YN II+ LCK G V +A E+++ +R + D ITY ILL
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 446 EHLKQAETKQALGLFCRMVKAG--LNPDIHAYTTLIAAFCRQKKMKESEKFFQ---EAIT 500
+ + +A L M+K +PD+ +Y LI C++ ++ ++ + E +
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 501 AG--------------------------------LFPTKETYTSMICGYLRDGNISSAVK 528
AG + +TYT+MI G+ + G ++ A
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
+M P Y L+S LCK+ LD+A + +E M P V+ +
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 589 KQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLL 636
K GD +A +L + + + T + LI + + A FF K++
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
AF +L M+++G+ NVY H +L+ GLC+ KA L L+ +R ++ P+V +Y +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL-LREMRRNSLMPDVFSYNTVI 184
Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
G+C+ +++ +A L MK G + T+ LI CK G + A + M G
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
++ Y ++I G C G + L + +R ITY L+ K + K+A +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
F M++ G+ P+++ YT LI C K KE+ + I P TY +I +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG--ISPCE 577
DG ++ AV+ + M + PDNITY L+ GLC + LDEA + M+ P
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKL 607
++ L + CK+ A+ I + L +KL
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 8/399 (2%)
Query: 282 ELLEEMVRKGWKPNVYTHTVLIDGL--CKKGWTEKAFRL-FLKLVRSDNYKPNVHTYTAM 338
EL RK + + + + V + GL C + F L L+ + NV+ + +
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
+ G C+ + +A LL M+ L+P+ +Y ++I G C+ E+A +L + M GC
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+ ++ + +ID CK G++ EA LK+ L+AD + YT L+ E +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LF +++ G +P Y TLI FC+ ++KE+ + F+ I G+ P TYT +I G
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
G A++ M + P+ +TY +I+ LCK + +A + E M + P +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 579 TRVTLAYEYCKQG--DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
T L C +G D A+ ++ L D + + N LI LC E R+ A +
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
L+ K DRV+ L N+ ++ +L ++I++
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 5/235 (2%)
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
+A N ++ L + + A+ +K + + + ++ + LL +++ +T A G+
Sbjct: 73 FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLAL 132
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M+K G +++ + L+ CR + ++ +E L P +Y ++I G+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ A++ M GC+ +T+G LI CK K+DEA F + M G+ V +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 583 LAYEYCKQG--DSATAMI--ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
L +C G D A+ +LE D I T NTLIR C ++ A+ F
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNTLIRGFCKLGQLKEASEIFE 306
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 230/477 (48%), Gaps = 29/477 (6%)
Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
GF +E+ NG+ T+ ++ C + +A V G D ++ +V
Sbjct: 91 GFCKGMEL--NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
+C GRV+EA + M++ D T++ LI C +G + +A L++ MV G
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC---LKGRVSEALVLIDRMVEYG 205
Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
++P+ T+ +++ LCK G + A LF K+ N K +V Y+ +I CK+ + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
L M+ +G+ + TY+SLI G C G ++ ++ M P++ ++A+ID
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
K+G++ EA EL + R + D ITY L+ K+ +A +F MV G PD
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
I Y+ LI ++C+ K++ + + F+E + GL P TY +++ G+ + G +++A + FQ
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM------IGKGI------SPCEVT 579
M G P +TYG L+ GLC +L++A + +E M +G GI C +
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 580 RVTLAYE-YCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
+V A+ +C D K + T N +I LC + + A + F K+
Sbjct: 505 KVDDAWSLFCSLSDKGV----------KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 212/432 (49%), Gaps = 7/432 (1%)
Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
G+ D + +M+ YCR ++ A L G D T + L+ FC G +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC---LEGRV 156
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
+A L++ MV +P++ T + LI+GLC KG +A L ++V ++P+ TY
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGP 215
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+++ CK A L +M+E+ + + Y+ +I CK G+F+ A L + M +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
++ Y+++I GLC G+ + ++L++ R + D +T++ L+ +K+ + +A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
L+ M+ G+ PD Y +LI FC++ + E+ + F ++ G P TY+ +I Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
+ + ++ F+ ++ G P+ ITY L+ G C+ KL+ A + ++ M+ +G+ P
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKRVGMAALFFHK 634
VT L C G+ A+ I E + K L I N +I +C+ +V A F
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 635 LLGKDQNVDRVS 646
L K D V+
Sbjct: 516 LSDKGVKPDVVT 527
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 5/368 (1%)
Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
V+ C+ G + A +F+EM +G+ AD +Y ++ C G+ + + L M+ R
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
I D T + LI F +G + +A EL EM+ +G P+ T+ LIDG CK+
Sbjct: 311 IIPDVVTFSALIDVFVKEG---KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
+A ++F L+ S +P++ TY+ +I+ YCK ++++ L + +GL+PNT TY +L
Sbjct: 368 EANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
+ G C+ G A +L M G P++ Y ++DGLC G + +A E+ +K + +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
Y I++ ++ A LFC + G+ PD+ Y +I C++ + E++
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
F++ G P TY +I +L + S+V+ + M G + D+ T +I L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Query: 554 KQSKLDEA 561
+ +LD++
Sbjct: 607 DR-RLDKS 613
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 4/355 (1%)
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M G + ++YT T++I+ C+K AF + + + Y+P+ T++ +++G+C E
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEG 154
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
+++ A L++RM E P+ T ++LI G C G A L+D M + G P+ Y
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+++ LCK G A +L +K +R ++A + Y+I++ K AL LF M
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G+ D+ Y++LI C K + K +E I + P T++++I ++++G + A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
+ + M G APD ITY +LI G CK++ L EA Q ++ M+ KG P VT L
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 587 YCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
YCK M + + K I T NTL+ C ++ A F +++ +
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 210/469 (44%), Gaps = 40/469 (8%)
Query: 146 NGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVE 205
NG E M M++ + +L FS++ G T T + +V C G V
Sbjct: 99 NG-IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 206 YAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLI 265
A + D M D + ++ C GRV+EA + M++ G D T ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
C G + A +L +M + K +V ++++ID LCK G + A LF ++
Sbjct: 218 NRLCKSG---NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EM 273
Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
K +V TY+++I G C + K + +L M + ++P+ T+++LI K G
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
A +L + M G P+ YN++IDG CK+ + EA ++ + + D +TY+IL++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
+ K + LF + GL P+ Y TL+ FC+ K+ +++ FQE ++ G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQI----------------------------- 536
+ TY ++ G +G ++ A++ F++M +
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 537 ------GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
G PD +TY +I GLCK+ L EA + M G +P + T
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 4/402 (0%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
GR+ E ++ M G T V+ C+ G A ++F +M R + A Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
+++ + C+ G +A + M +G D T + LI C+ G ++L E
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG---KWDDGAKMLRE 305
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M+ + P+V T + LID K+G +A L+ +++ + P+ TY ++I G+CKE
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKEN 364
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
++ A + + M +G P+ TY+ LI +CK + L + +G PN YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
++ G C+ G++ A EL ++ R + +TY ILL E +AL +F +M K+
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
+ I Y +I C K+ ++ F G+ P TY MI G + G++S A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
F++M + GC PD+ TY LI S L + + E M
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 19/351 (5%)
Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
Y + SL +G+F+ A + M + G+ +G M+ EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 181 NNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVT 240
+ T + ++ + + G + A+E+++EM RG+ D +Y ++ +C+ +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 241 EADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHT 300
EA++ M+ +G D T ++LI ++C K R + L E+ KG PN T+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYC-KAKR--VDDGMRLFREISSKGLIPNTITYN 424
Query: 301 VLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKE 360
L+ G C+ G A LF ++V S P+V TY ++ G C ++N+A + E+M++
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
+ Y +I+G C + A+ L + +G P++ YN +I GLCKKG + E
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 421 AYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
A L +K + D TY IL+ HL + ++ L M G + D
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 9/322 (2%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K+N A L E M + LP + L + ++ M G ++Y
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+I+ C+K ++ A+ +L +A++ + D IT++ L++ + +A+ L RMV+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
PD+ +TLI C + ++ E+ + G P + TY ++ + GN + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
+ F++M + + Y +I LCK D+A + M KGI VT +L
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 587 YCKQGD-SATAMIILESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
C G A ++ E + + + + T + LI E ++ A +++++ + D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 644 RVSLAAL------KNACYESNK 659
++ +L +N +E+N+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQ 371
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
K+ ++ F+ I + PT + + R + + + M G D T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 547 ALISGLCKQSKLDEACQFYESMIGK----GISPCEVTRVTLAYEYCKQGDSATAMIILE- 601
+I+ C++ KL F S++G+ G P +T TL +C +G + A+ +++
Sbjct: 110 IMINCYCRKKKL----LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 602 --SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
+ ++ + TV+TLI LC + RV A + +++ D V+ + N +S
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 660 YALFSDLSQRIAE 672
AL DL +++ E
Sbjct: 226 SALALDLFRKMEE 238
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 225/446 (50%), Gaps = 14/446 (3%)
Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWL- 246
T + +V C+L +V+ A E F M +G + ++ R+ R+ A W+
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA--WVF 212
Query: 247 SAMLDRGAILDNA-TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDG 305
A + R I N T ++I C +G +K+A L M G KP + T+ L+ G
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEG---KLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 306 LCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLP 365
+G E A RL + ++S ++P++ TY ++S C E RA +L MKE GL+P
Sbjct: 270 FSLRGRIEGA-RLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVP 325
Query: 366 NTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELL 425
++ +Y LI G G+ E A+ D M K+G P Y YN +I GL + +++ A L+
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
++ ++ + D +TY IL++ + + + K+A L M+ G+ P YT+LI CR+
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
K +E+++ F++ + G+ P +++ G+ GN+ A + M+ + PD++TY
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE---S 602
L+ GLC + K +EA + M +GI P ++ TL Y K+GD+ A ++ + S
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Query: 603 LDKKLWIRTVNTLIRKLCSEKRVGMA 628
L + T N L++ L + +A
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELA 591
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 7/433 (1%)
Query: 143 LISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELG 202
L+ F E +++ + + R++ + +M + T N ++ + C+ G
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
++ A+ M G+ +Y +V + GR+ A +S M +G D T
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
+++ C++G +A E+L EM G P+ ++ +LI G G E AF ++
Sbjct: 300 PILSWMCNEG------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
V+ P +TY +I G E K+ AE+L+ ++E+G++ ++ TY LI G+C+ G+
Sbjct: 354 VKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
++A+ L D M +G P + Y ++I LC+K + +EA EL +K + ++ D +
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
L+ H +A L M +NPD Y L+ C + K +E+ + E G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
+ P +Y ++I GY + G+ A M +G P +TY AL+ GL K + + A
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 563 QFYESMIGKGISP 575
+ M +GI P
Sbjct: 593 ELLREMKSEGIVP 605
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 180/356 (50%), Gaps = 7/356 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V F+ GR++ ++ EM + G T N ++ C G A EV EM G
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIG 322
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ D+ SY +++ G + A + M+ +G + T LI I+
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF---MENKIE 379
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
A L+ E+ KG + T+ +LI+G C+ G +KAF L +++ +D +P TYT++
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSL 438
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I C++ K A+ L E++ +G+ P+ +L+ GHC +GN +RA+ L+ M
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+ YN ++ GLC +G+ +EA EL+ + +R ++ D I+Y L+S + K+ +TK A
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFM 558
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
+ M+ G NP + Y L+ + ++ + +E+ +E + G+ P ++ S+I
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 166/412 (40%), Gaps = 55/412 (13%)
Query: 276 SIKQAFELLEEMV--RKGWKPNVYTH------------TVLIDGL----CKKGWTEKAFR 317
S K +LL+E+V RK N++ T+L D L C+ ++A
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIE 176
Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
F L++ + P T +++ + ++ A + M + N T+ +I
Sbjct: 177 CFY-LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVL 235
Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
CK G ++A + +M G P I YN ++ G +GR++ A ++ + + Q D
Sbjct: 236 CKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM 295
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
TY +LS + + L M + GL PD +Y LI ++ + + E
Sbjct: 296 QTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
+ G+ PT TY ++I G + I +A + + + G D++TY LI+G C+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIR 617
+A ++ M+ GI P + T +L Y C++ + A D+
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA-------DE------------ 453
Query: 618 KLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQ 668
F K++GK D V + L + C N FS L +
Sbjct: 454 -------------LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/297 (17%), Positives = 107/297 (36%), Gaps = 36/297 (12%)
Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
+K ++ ++ L A R I + +L+ + +A+ F M + G P
Sbjct: 132 RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTE 191
Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
++ R +++ + F+ + + T+ MI ++G + A + M
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251
Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
G P +TY L+ G + +++ A M KG P T + C +G +
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRA 311
Query: 594 ATAM-------IILESLDKKLWIR----------------------------TVNTLIRK 618
+ + ++ +S+ + IR T NTLI
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYESNKYALFSDLSQRIAEGI 674
L E ++ A + ++ K +D V+ L N C + F+ + + +GI
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 208/439 (47%), Gaps = 4/439 (0%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
GR+ E +V M G TLN +V C G V A + D M G + +Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
++ C+ G+ A L M +R LD +++I C G S+ AF L E
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG---SLDNAFNLFNE 272
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M KG+K ++ +T LI G C G + +L +++ P+V ++A+I + KE
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEG 331
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K+ AE L + M ++G+ P+T TYTSLI G CK ++A ++DLM +GC PNI +N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+I+G CK + + EL +K R + AD +TY L+ + + + A LF MV
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
+ PDI +Y L+ C + +++ + F++ + + Y +I G + A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
F + G PD TY +I GLCK+ L EA + M G SP T L
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 587 YCKQGDSATAMIILESLDK 605
+ +GD+ + ++E + +
Sbjct: 572 HLGEGDATKSAKLIEEIKR 590
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 214/426 (50%), Gaps = 7/426 (1%)
Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
+M +G+ + + +M+ CR +++ A + ++ G D T + LI C
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC--- 153
Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
G + +A EL++ MV G KP + T L++GLC G A L ++V + ++PN
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNE 212
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
TY ++ CK + A LL +M+E+ + + Y+ +I G CK G+ + A++L +
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M +G +I Y +I G C GR + +LL+ +R++ D + ++ L+ +K+ +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
++A L M++ G++PD YT+LI FC++ ++ ++ ++ G P T+
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
+I GY + I ++ F++M+ G D +TY LI G C+ KL+ A + ++ M+ +
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
+ P V+ L C G+ A+ I E ++K +L I N +I +C+ +V A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 630 LFFHKL 635
F L
Sbjct: 513 DLFCSL 518
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 188/365 (51%), Gaps = 8/365 (2%)
Query: 199 CELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
C+ G ++ A +F+EM +G AD Y ++ +C GR + + L M+ R D
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
+ LI F +G +++A EL +EM+++G P+ T+T LIDG CK+ +KA +
Sbjct: 318 VAFSALIDCFVKEG---KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
L L+ S PN+ T+ +I+GYCK ++ L +M +G++ +T TY +LI G C
Sbjct: 375 -LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
++G E A +L M P+I +Y ++DGLC G ++A E+ +K + +++ D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
Y I++ ++ A LFC + G+ PD+ Y +I C++ + E++ F++
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI----SGLCK 554
G P TY +I +L +G+ + + K + + + G + D T ++ G K
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLK 613
Query: 555 QSKLD 559
+S LD
Sbjct: 614 KSFLD 618
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 4/394 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +V+ G++ + ++ M G T V+ + C+ G A E+ +M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
R + DA Y +++ C+ G + A + M +G D T LI FC + G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC---YAG 296
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
+LL +M+++ P+V + LID K+G +A L ++++ P+ TY
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTY 355
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
T++I G+CKE ++++A +L+ M +G PN T+ LI G+CK + +L M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
G + YN +I G C+ G+++ A EL ++ R ++ D ++Y ILL E ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
AL +F ++ K+ + DI Y +I C K+ ++ F G+ P +TY MI
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
G + G++S A F++M + G +P+ TY LI
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 16/380 (4%)
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
+L ++M KG N+YT +++I+ C+ AF K+++ Y+P+ T++ +I
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLI 149
Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
+G C E +++ A L++RM E G P T +L+ G C G A L+D M + G
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL 459
PN Y ++ +CK G+ A ELL+K +R+++ D + Y+I++ K A L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 460 FCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLR 519
F M G DI YTTLI FC + + K ++ I + P ++++I +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 520 DGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVT 579
+G + A + + M Q G +PD +TY +LI G CK+++LD+A + M+ KG P T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 580 RVTLAYEYCKQGDSATAMIILESLD--KKLWIR-------TVNTLIRKLCSEKRVGMAAL 630
L YCK A +I + L+ +K+ +R T NTLI+ C ++ +A
Sbjct: 390 FNILINGYCK------ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 631 FFHKLLGKDQNVDRVSLAAL 650
F +++ + D VS L
Sbjct: 444 LFQEMVSRRVRPDIVSYKIL 463
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 214/456 (46%), Gaps = 6/456 (1%)
Query: 152 AHEV--MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEE 209
AH + + M++ +L FS + ++ G T T + ++ C G V A E
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
+ D M G + +V C G+V++A + M++ G + T ++ C
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
G A ELL +M + K + ++++IDGLCK G + AF LF ++ +K
Sbjct: 224 KSG---QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFK 279
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
++ YT +I G+C + + LL M ++ + P+ +++LI K G A +L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
M + G +P+ Y ++IDG CK+ ++ +A +L + + T+ IL++ + K
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
L LF +M G+ D Y TLI FC K++ +++ FQE ++ + P +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y ++ G +G A++ F+++ + D Y +I G+C SK+D+A + S+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
KG+ P T + CK+G + A ++ +++
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 164/397 (41%), Gaps = 39/397 (9%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF ++ RS +P + ++ + S + ++ + L ++M+ +G+ N T +
Sbjct: 54 DDAVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYE--------- 423
+I C+ A+ M + K G P+ ++ +I+GLC +GRV EA E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 424 --------------------------LLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
L+ + + Q +++TY +L K +T A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
L +M + + D Y+ +I C+ + + F E G YT++I G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
G K + M + PD + + ALI K+ KL EA + ++ MI +GISP
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 578 VTRVTLAYEYCK--QGDSATAMI-ILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
VT +L +CK Q D A M+ ++ S IRT N LI C + F K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 635 LLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIA 671
+ + D V+ L E K + +L Q +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K + A L + M P ++ L + ++ DL M +G N+Y +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+I+ C+ ++ A+ + K + + D +T++ L++ + +AL L RMV+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G P + L+ C K+ ++ + G P + TY ++ + G + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
++ ++M + D + Y +I GLCK LD A + M KG + TL
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 587 YCKQG 591
+C G
Sbjct: 292 FCYAG 296
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 32/236 (13%)
Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
K++Y L + + A+ LF M ++ P + ++ L + R K+ +
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
+ G+ T + MI R +S A ++ ++G PD +T+ LI+GLC +
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156
Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLI 616
++ EA + + M+ G P +T +N L+
Sbjct: 157 RVSEALELVDRMVEMGHKPTLIT--------------------------------LNALV 184
Query: 617 RKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 672
LC +V A L +++ + V+ + +S + AL +L +++ E
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 194/417 (46%), Gaps = 55/417 (13%)
Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
L++ AE+ + EM A GV + + C G+ +A + M+ +G I D +T +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
++ C+ ++ AF L EEM R G +VYT+T+++D CK G E+A + F ++
Sbjct: 488 KVLNYLCNAS---KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
R PNV TYTA+I Y K +K++ A L E M +G LPN TY++LI GHCK G
Sbjct: 545 -REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 383 FERA----------------------YD-----------------------------LMD 391
E+A YD L+D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M EGC PN Y+A+IDGLCK G++ EA E+ + + A TY+ L+ + K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
A + +M++ P++ YT +I C+ K E+ K Q G P TYT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
+MI G+ G I + ++ +RM G AP+ +TY LI CK LD A E M
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 243/532 (45%), Gaps = 45/532 (8%)
Query: 160 VSSFAE----IGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
VSSF G+ ++ FS++ EM G TST ++V+ C +E A +F+EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
G+ AD +Y +MV ++C+ G + +A +W + M + G + T T LI A+
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK--- 567
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS------DNY- 328
+ A EL E M+ +G PN+ T++ LIDG CK G EKA ++F ++ S D Y
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 329 --------KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKV 380
+PNV TY A++ G+CK ++ A LL+ M +G PN Y +LI G CKV
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 381 GNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITY 440
G + A ++ M + G +Y Y+++ID K R A ++L K + + + Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 441 TILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAIT 500
T ++ K +T +A L M + G P++ YT +I F K++ + + +
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 501 AGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ----- 555
G+ P TY +I ++G + A + M Q Y +I G K+
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867
Query: 556 SKLDEACQ--------FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKL 607
LDE Q Y +I I + R+ +A ++ + +A ++ S
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLI---KAQRLEMALRLLEEVATFSATLVDYS----- 919
Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
T N+LI LC +V A F ++ K + S +L + ++K
Sbjct: 920 --STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 217/500 (43%), Gaps = 55/500 (11%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
++C S ++G+ +E ++V T N +P T +++ CE L E A + + M
Sbjct: 273 LRCFAYSLCKVGKWREALTLV--ETENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
A + +Y ++ ++ R L+ M+ G L+ A+C G
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
A++LL++MV+ G P + +LI +C D N
Sbjct: 390 ---YAYKLLKKMVKCGHMPGYVVYNILIGSIC-----------------GDKDSLNC--- 426
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
+ ++ AE M G++ N +S C G +E+A+ ++ M
Sbjct: 427 ----------DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
+G P+ Y+ +++ LC +++ A+ L ++ + L AD TYTI++ K +Q
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
A F M + G P++ YT LI A+ + KK+ + + F+ ++ G P TY+++I
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 516 GYLRDGNISSAVKYFQRM----------------NQIGCAPDNITYGALISGLCKQSKLD 559
G+ + G + A + F+RM + P+ +TYGAL+ G CK +++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLI 616
EA + ++M +G P ++ L CK G A + + + + + T ++LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 617 RKLCSEKRVGMAALFFHKLL 636
+ KR +A+ K+L
Sbjct: 717 DRYFKVKRQDLASKVLSKML 736
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 9/349 (2%)
Query: 146 NGNFERAHEVMQ-CMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
+ N ER + V ++ F + R++E ++ M+ G + ++ C++G +
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
+ A+EV EM G A +Y ++ Y ++ R A + LS ML+ + T +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
I C G +A++L++ M KG +PNV T+T +IDG G E L L+ +
Sbjct: 751 IDGLCKV---GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL-LERMG 806
Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
S PN TY +I CK ++ A LLE MK+ +T Y +I G K F
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864
Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA--FQRELQADKITYTI 442
+ L+D +G++ P + Y +ID L K R++ A LL++ F L TY
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
L+ + + A LF M K G+ P++ ++ +LI R K+ E+
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++ ++G+L E + EM+ +G P T + ++ ++ + A +V +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
+ Y M+ C++G+ EA + + M ++G + T T +I F G
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GMI 792
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF--------------- 319
G I+ ELLE M KG PN T+ VLID CK G + A L
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Query: 320 -----------------LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK--E 360
L + D+ P + Y +I K +++ A LLE +
Sbjct: 853 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 361 QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQE 420
L+ ++TY SLI C E A+ L M K+G P + ++ ++I GL + ++ E
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 421 AYELL 425
A LL
Sbjct: 973 ALLLL 977
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 23/359 (6%)
Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
G+K + L+D L + EK FL+ +R D+ + ++ +C+ +
Sbjct: 160 GYKHTAPVYNALVD-LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSI 218
Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERA---YDLMDL--MGKEGCTPNIYAY 405
A L R+K+ P+ +TY LI K + A + M L + +G T +AY
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
+ LCK G+ +EA L++ D + YT L+S + + ++A+ RM
Sbjct: 279 S-----LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
P++ Y+TL+ +K++ ++ + G +P+ + + S++ Y G+ S
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSK------LDEACQFYESMIGKGISPCEVT 579
A K ++M + G P + Y LI +C LD A + Y M+ G+ ++
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 580 RVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNT---LIRKLCSEKRVGMAALFFHKL 635
+ C G A ++ + + +I +T ++ LC+ ++ +A L F ++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 6/241 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
M+ ++G+ E + ++ M G T ++ +G +E E+ + M ++G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V + +Y++++ C+ G + A L M A +I +GF
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFI 864
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR-SDNYKPNVHTYTA 337
++ LL+E+ + P + + +LID L K E A RL ++ S TY +
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+I C K+ A L M ++G++P ++ SLI G + A L+D +
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 984
Query: 398 C 398
C
Sbjct: 985 C 985
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 197/368 (53%), Gaps = 5/368 (1%)
Query: 194 VVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRG 253
V+ C+ V+ A +F EM +G+ D +Y ++ C GR ++A R LS ML+R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 254 AILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTE 313
+ T LI AF +G + +A +L +EM+++ PN+ T+ LI+G C +
Sbjct: 306 INPNVVTFNSLIDAFAKEG---KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 314 KAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSL 373
+A ++F +V D P+V TY +I+G+CK +K+ L M +GL+ NT TYT+L
Sbjct: 363 EAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 374 IYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQREL 433
I+G + + + A + M +G PNI YN ++DGLCK G++++A + + + ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 434 QADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEK 493
+ D TY I+ K + + LFC + G+ PD+ AY T+I+ FC++ +E+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 494 FFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLC 553
F + G P TY ++I +LRDG+ +++ + + M A D TYG L++ +
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDML 600
Query: 554 KQSKLDEA 561
+LD+
Sbjct: 601 HDGRLDKG 608
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 6/449 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +++ F R+ E ++V +M G T T +V + A + + M
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLITAFCDKGFR 274
+G D +Y ++ C+ G A L+ M ++G I D + +I + C +R
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCK--YR 254
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
+ A L EM KG +P+V+T++ LI LC G A RL ++ PNV T
Sbjct: 255 -HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVT 312
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
+ ++I + KE K+ AE L + M ++ + PN TY SLI G C + A + LM
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
+ C P++ YN +I+G CK +V + EL + +R L + +TYT L+ + ++
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
A +F +MV G++P+I Y TL+ C+ K++++ F+ + + P TY M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
G + G + F ++ G PD I Y +ISG CK+ +EA + M G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 575 PCEVTRVTLAYEYCKQGDSATAMIILESL 603
P T TL + + GD A + +++ +
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 210/417 (50%), Gaps = 7/417 (1%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
++M GV + +Y +M+ CR +++ A L M+ G TL L+ FC
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC-H 147
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
G R I +A L+++MV G++P+ T T L+ GL + +A L ++V +P+
Sbjct: 148 GNR--ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPD 204
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
+ TY A+I+G CK + + A LL +M++ + + Y+++I CK + + A +L
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G P+++ Y+++I LC GR +A LL +R++ + +T+ L+ K+
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ +A LF M++ ++P+I Y +LI FC ++ E+++ F ++ P TY
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
++I G+ + + ++ F+ M++ G + +TY LI G + S D A ++ M+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
G+ P +T TL CK G AM++ E L K I T N + +C +V
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 39/389 (10%)
Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
E+M G N+YT+ ++I+ LC++ A + K+++ Y P++ T ++++G+C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL-GYGPSIVTLNSLLNGFCH 147
Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
+++ A L+++M E G P+T T+T+L++G + A L++ M +GC P++
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
Y A+I+GLCK+G A LL K + +++AD + Y+ ++ K AL LF M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 465 KAGLNPDIHAYTTLIA-----------------------------------AFCRQKKMK 489
G+ PD+ Y++LI+ AF ++ K+
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
E+EK F E I + P TY S+I G+ + A + F M C PD +TY LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
+G CK K+ + + + M +G+ VT TL + + + D A ++ + +
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
I T NTL+ LC ++ A + F L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 174/383 (45%), Gaps = 5/383 (1%)
Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGL 203
+ G E + ++ S + + + ++ EM N G+ T + ++ C G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
A + +M R + + ++ ++ A+ + G++ EA++ M+ R + T
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
LI FC + +A ++ MV K P+V T+ LI+G CK LF +
Sbjct: 351 LINGFC---MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
R N TYT +I G+ + + A+M+ ++M G+ PN TY +L+ G CK G
Sbjct: 408 RR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
E+A + + + K P+IY YN + +G+CK G+V++ ++L + ++ D I Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
+S K+ ++A LF +M + G PD Y TLI A R S + +E +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 504 FPTKETYTSMICGYLRDGNISSA 526
TY ++ L DG +
Sbjct: 587 AGDASTY-GLVTDMLHDGRLDKG 608
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 43/400 (10%)
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---VRSDNYKPNVH 333
+ +A +L EMV+ P++ + L+ + K K F L + + N++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM----KKFDLVISFGEKMEILGVSHNLY 101
Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
TY MI+ C+ +++ A +L +M + G P+ T SL+ G C A L+D M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
+ G P+ + ++ GL + + EA L+++ + Q D +TY +++ K+ E
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
AL L +M K + D+ Y+T+I + C+ + + ++ F E G+ P TY+S+
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
I G S A + M + P+ +T+ +LI K+ KL EA + ++ MI + I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFH 633
P I T N+LI C R+ A F
Sbjct: 342 DP--------------------------------NIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 634 KLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
++ KD D V+ L N ++ K LF D+S+R
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 211/403 (52%), Gaps = 5/403 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G F+++ +M L N ++ C+ ++ A +F EM +G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y ++ C GR ++A R LS M++R D T + LI AF +G +
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLV 343
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +EMV++ P++ T++ LI+G C ++A ++F +V + P+V TY +
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTL 402
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G+CK +++ + M ++GL+ NT TY LI G + G+ + A ++ M +G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PNI YN ++DGLCK G++++A + + + +++ TY I++ K + +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LFC + G+ PD+ AY T+I+ FCR+ +E++ F+E G P Y ++I L
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
RDG+ ++ + + M G A D T G L++ + +LD++
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 7/417 (1%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
++M G+ + +Y +++ +CR ++ A L M+ G + TL+ L+ +C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
I +A L+++M G++PN T LI GL +A L ++V + +P+
Sbjct: 165 K---RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPD 220
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
+ TY +++G CK + A LL +M++ L P Y ++I G CK + + A +L
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G PN+ Y+++I LC GR +A LL +R++ D T++ L+ +K+
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ +A L+ MVK ++P I Y++LI FC ++ E+++ F+ ++ FP TY
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
++I G+ + + ++ F+ M+Q G + +TY LI GL + D A + ++ M+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
G+ P +T TL CK G AM++ E L + + I T N +I +C +V
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 13/451 (2%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +++ + R+ E ++V +M G T T N ++ A + D M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
A+G D +Y ++V C+ G A L+ M L+ G ++ N +I C
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT----IIDGLCK- 268
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
+ A L +EM KG +PNV T++ LI LC G A RL ++ P+
Sbjct: 269 --YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPD 325
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
V T++A+I + KE K+ AE L + M ++ + P+ TY+SLI G C + A + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M + C P++ YN +I G CK RV+E E+ ++ QR L + +TY IL+ +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ A +F MV G+ P+I Y TL+ C+ K++++ F+ + + PT TY
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
MI G + G + F ++ G PD + Y +ISG C++ +EA ++ M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
G P TL + GD A+A +I E
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 182/357 (50%), Gaps = 4/357 (1%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L E+M G N YT+++LI+ C++ A + K+++ Y+PN+ T +++++GY
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGY 161
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C ++++ A L+++M G PNT T+ +LI+G A L+D M +GC P++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
Y +++GLCK+G A+ LL K Q +L+ + Y ++ K AL LF
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M G+ P++ Y++LI+ C + ++ + + I + P T++++I ++++G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ A K + M + P +TY +LI+G C +LDEA Q +E M+ K P VT T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
L +CK M + + ++ + T N LI+ L MA F +++
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 39/351 (11%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF ++V+S + P++ ++ ++S K K + L E+M+ G+ N TY+
Sbjct: 63 DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
LI C+ A ++ M K G PNI +++++G C R+ EA L+ + F
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD--------------------- 471
Q + +T+ L+ + +A+ L RMV G PD
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 472 --------------IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
+ Y T+I C+ K M ++ F+E T G+ P TY+S+I
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
G S A + M + PD T+ ALI K+ KL EA + Y+ M+ + I P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 578 VTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
VT +L +C A + E + K + T NTLI+ C KRV
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 3/312 (0%)
Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
E K++ A L M + P+ ++ L+ K+ F+ L + M G N Y
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
Y+ +I+ C++ ++ A +L K + + + +T + LL+ + +A+ L +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
G P+ + TLI K E+ + G P TY ++ G + G+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
A +M Q P + Y +I GLCK +D+A ++ M KGI P VT +L
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 585 YEYCKQGDSATAMIIL-ESLDKKLW--IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQN 641
C G + A +L + +++K+ + T + LI E ++ A + +++ + +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 642 VDRVSLAALKNA 653
V+ ++L N
Sbjct: 359 PSIVTYSSLING 370
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
L + + A+ LF MVK+ P I ++ L++A + K ++ G+
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
TY+ +I + R + A+ +M ++G P+ +T +L++G C ++ EA +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 568 MIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK---LWIRTVNTLIRKLCSEKR 624
M G P VT TL + ++ AM +++ + K + T ++ LC
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 625 VGMAALFFHKL 635
+A +K+
Sbjct: 237 TDLAFNLLNKM 247
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 214/457 (46%), Gaps = 7/457 (1%)
Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
R+ E +V M G TLN +V C G V A + D M G + +Y
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
++ C+ G+ A L M +R LD +++I C GS+ AF L EM
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD---GSLDNAFNLFNEM 289
Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
KG+K ++ T+ LI G C G + +L +++ PNV T++ +I + KE K
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGK 348
Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
+ A+ LL+ M ++G+ PNT TY SLI G CK E A ++DLM +GC P+I +N
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
+I+G CK R+ + EL ++ R + A+ +TY L+ + + + A LF MV
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
+ PDI +Y L+ C +++++ + F + + + Y +I G + A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
F + G D Y +IS LC++ L +A + M +G +P E+T L +
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 588 CKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCS 621
D+ TA ++E + + + TV +I L S
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 216/434 (49%), Gaps = 7/434 (1%)
Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
+M ++G+ + +M+ +CR +++ A + ++ G D L+ C
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC--- 169
Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
+ +A EL++ MV G KP + T L++GLC G A L ++V + ++PN
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNE 228
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
TY +++ CK + A LL +M+E+ + + Y+ +I G CK G+ + A++L +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M +G +I YN +I G C GR + +LL+ +R++ + +T+++L+ +K+ +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
++A L M++ G+ P+ Y +LI FC++ +++E+ + I+ G P T+
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
+I GY + I ++ F+ M+ G + +TY L+ G C+ KL+ A + ++ M+ +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAA 629
+ P V+ L C G+ A+ I ++K +L I +I +C+ +V A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 630 LFFHKLLGKDQNVD 643
F L K +D
Sbjct: 529 DLFCSLPLKGVKLD 542
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 226/480 (47%), Gaps = 12/480 (2%)
Query: 163 FAEIGRLKEGFSMVI----EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
F+ I + K+ + +V+ +M + G+ TL+ ++ C + YA ++ G
Sbjct: 95 FSAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D + ++ C RV+EA + M++ G TL L+ C G +
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC---LNGKVS 210
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
A L++ MV G++PN T+ +++ +CK G T A L K+ N K + Y+ +
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSII 269
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G CK+ ++ A L M+ +G + TY +LI G C G ++ L+ M K
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+PN+ ++ +ID K+G+++EA +LLK+ QR + + ITY L+ K+ ++A+
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ M+ G +PDI + LI +C+ ++ + + F+E G+ TY +++ G+
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ G + A K FQ M PD ++Y L+ GLC +L++A + + + +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 579 TRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
+ + + C A + SL KL R N +I +LC + + A + F K+
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 199/437 (45%), Gaps = 5/437 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +V+ G++ + ++ M G T V+ + C+ G A E+ +M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
R + DA Y +++ C+ G + A + M +G D T LI FC+ G
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG--- 312
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
+LL +M+++ PNV T +VLID K+G +A +L LK + PN TY
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL-LKEMMQRGIAPNTITY 371
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
++I G+CKE ++ A +++ M +G P+ T+ LI G+CK + +L M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
G N YN ++ G C+ G+++ A +L ++ R ++ D ++Y ILL E ++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
AL +F ++ K+ + DI Y +I C K+ ++ F G+ Y MI
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
R ++S A F++M + G APD +TY LI A + E M G P
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-P 610
Query: 576 CEVTRVTLAYEYCKQGD 592
+V+ V + G+
Sbjct: 611 ADVSTVKMVINMLSSGE 627
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 184/371 (49%), Gaps = 4/371 (1%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L ++M KG ++YT +++I+ C+ AF K+++ Y+P+ + +++G
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL-GYEPDTVIFNTLLNGL 168
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C E +++ A L++RM E G P T +L+ G C G A L+D M + G PN
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
Y +++ +CK G+ A ELL+K +R ++ D + Y+I++ K A LF
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M G DI Y TLI FC + + K ++ I + P T++ +I ++++G
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ A + + M Q G AP+ ITY +LI G CK+++L+EA Q + MI KG P +T
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKD 639
L YCK + + + + I T NTL++ C ++ +A F +++ +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 640 QNVDRVSLAAL 650
D VS L
Sbjct: 469 VRPDIVSYKIL 479
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 8/364 (2%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF +++S P V + + S K ++ L ++M+ +G+ + T +
Sbjct: 70 DDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
+I C+ A+ M + K G P+ +N +++GLC + RV EA EL+ + +
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
+ IT L++ + A+ L RMV+ G P+ Y ++ C+ + +
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
+ ++ + Y+ +I G +DG++ +A F M G D ITY LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-MIILESLDKKLWIRT 611
C + D+ + MI + ISP VT L + K+G A ++ E + + + T
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 612 V--NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALFSD 665
+ N+LI C E R+ A ++ K + D ++ L N ++N+ LF +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 666 LSQR 669
+S R
Sbjct: 429 MSLR 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 109/236 (46%), Gaps = 7/236 (2%)
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
++Y LS L + A+ LF M+++ P + + L +A + K+ + ++
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
+ G+ + T + MI + R +S A ++ ++G PD + + L++GLC + +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNT 614
+ EA + + M+ G P +T TL C G + A+++++ + + + T
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA-CYE---SNKYALFSDL 666
++ +C + +A K+ ++ +D V + + + C + N + LF+++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 245/510 (48%), Gaps = 33/510 (6%)
Query: 67 SMVLESYYQQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVAL-----SFFY 121
S+ L + L P + L ++ H I+ SL G MV + SF +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV---GQMVEMGYQPDSFTF 189
Query: 122 WAIGFAKFRH--------FMRLYIV--CATSLISNGNFERAHEVMQCMVSSFAEIGRLKE 171
+ FRH + +V C L++ G +V+ + G +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG----------IVVNGLCKRGDIDL 239
Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
S++ +M + N ++ C V A +F EM +G+ + +Y ++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
C GR ++A R LS M++R + T + LI AF +G + +A +L +EM+++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKRS 356
Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
P+++T++ LI+G C ++A +F ++ D + PNV TY +I G+CK ++++
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEG 415
Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
L M ++GL+ NT TYT+LI+G + + A + M +G P+I Y+ ++DG
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
LC G+V+ A + + + +++ D TY I++ K + + LFC + G+ P+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
+ YTT+++ FCR+ +E++ F+E G P TY ++I +LRDG+ +++ + +
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEA 561
M D T G L++ + +LD++
Sbjct: 596 EMRSCRFVGDASTIG-LVTNMLHDGRLDKS 624
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 7/417 (1%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
++M G+ + +Y +++ +CR +++ A L+ M+ G D TL L+ FC
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC-H 163
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
G R I A L+ +MV G++P+ +T LI GL + +A L ++V +P+
Sbjct: 164 GNR--ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPD 220
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
+ TY +++G CK ++ A LL++M++ + P Y ++I C N A +L
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G PN+ YN++I LC GR +A LL +R++ + +T++ L+ +K+
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ +A L+ M+K ++PDI Y++LI FC ++ E++ F+ I+ FP TY
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
++I G+ + + ++ F+ M+Q G + +TY LI G + + D A ++ M+
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
G+ P +T L C G TA+++ E L + I T N +I +C +V
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 213/451 (47%), Gaps = 13/451 (2%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +++ F R+ + S+V +M G + T N ++ A + D M
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM----LDRGAILDNATLTLLITAFCDK 271
+G D +Y ++V C+ G + A L M ++ G ++ N +I A C+
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT----IIDALCN- 268
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
++ A L EM KG +PNV T+ LI LC G A RL ++ PN
Sbjct: 269 --YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPN 325
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
V T++A+I + KE K+ AE L + M ++ + P+ TY+SLI G C + A + +
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
LM + C PN+ YN +I G CK RV E EL ++ QR L + +TYT L+ +
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
E A +F +MV G+ PDI Y+ L+ C K++ + F+ + + P TY
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
MI G + G + F ++ G P+ +TY ++SG C++ +EA + M +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 572 GISPCEVTRVTLAYEYCKQGD-SATAMIILE 601
G P T TL + + GD +A+A +I E
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 178/357 (49%), Gaps = 4/357 (1%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L E+M G N+YT+++LI+ C++ A + K+++ Y+P++ T ++++G+
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGF 161
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C +++ A L+ +M E G P++ T+ +LI+G + A L+D M +GC P++
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
Y +++GLCK+G + A LLKK Q +++ + Y ++ AL LF
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M G+ P++ Y +LI C + ++ + + I + P T++++I ++++G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ A K + M + PD TY +LI+G C +LDEA +E MI K P VT T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 583 LAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
L +CK M + + ++ + T TLI + A + F +++
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 12/366 (3%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF +V+S + P++ ++ ++S K K + L E+M+ G+ N TY+
Sbjct: 63 DDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
LI C+ A ++ M K G P+I N++++G C R+ +A L+ + +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
Q D T+ L+ + +A+ L RMV G PD+ Y ++ C++ + +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
++ + P Y ++I N++ A+ F M+ G P+ +TY +LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKL 607
C + +A + MI + I+P VT L + K+G A +I S+D +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALF 663
+ T ++LI C R+ A F ++ KD + V+ L ++ + LF
Sbjct: 362 F--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 664 SDLSQR 669
++SQR
Sbjct: 420 REMSQR 425
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 137/310 (44%), Gaps = 3/310 (0%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K++ A L M + P+ ++ L+ K+ F+ L + M G + N+Y Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+I+ C++ ++ A +L K + + D +T LL+ A+ L +MV+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G PD + TLI R + E+ + G P TY ++ G + G+I A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
+ ++M Q P + Y +I LC +++A + M KGI P VT +L
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 587 YCKQGDSATAMIIL-ESLDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
C G + A +L + +++K+ + T + LI E ++ A + +++ + + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 644 RVSLAALKNA 653
+ ++L N
Sbjct: 361 IFTYSSLING 370
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 42/281 (14%)
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
R+ + Y + L + A+ LF MVK+ P I ++ L++A + K
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
++ G+ TY+ +I + R +S A+ +M ++G PD +T +L++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 551 GLC-----------------------------------KQSKLDEACQFYESMIGKGISP 575
G C + ++ EA + M+ KG P
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFF 632
VT + CK+GD A+ +L+ +++ + + NT+I LC+ K V A F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 633 HKLLGKDQNVDRVS----LAALKNACYESNKYALFSDLSQR 669
++ K + V+ + L N S+ L SD+ +R
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 241/494 (48%), Gaps = 17/494 (3%)
Query: 113 SMVALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEV--MQCMVSSFAEIGRLK 170
S+V S F+ AI A+ + F + C L NG AH + + M++ F +
Sbjct: 87 SLVDFSRFFSAI--ARTKQFNLVLDFCK-QLELNG---IAHNIYTLNIMINCFCRCCKTC 140
Query: 171 EGFSMVIEMTNNGLPLITSTLNRVV-GIACELGLVEYAEEVFDEMCARGVCADASSYKLM 229
+S++ ++ G T+T N ++ G+ E G V A + D M G D +Y +
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVSEAVVLVDRMVENGCQPDVVTYNSI 199
Query: 230 VVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVR 289
V CR G + A L M +R D T + +I + C G I A L +EM
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG---CIDAAISLFKEMET 256
Query: 290 KGWKPNVYTHTVLIDGLCKKG-WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKM 348
KG K +V T+ L+ GLCK G W + A L LK + S PNV T+ ++ + KE K+
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 349 NRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAI 408
A L + M +G+ PN TY +L+ G+C A +++DLM + C+P+I + ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 409 IDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
I G C RV + ++ + +R L A+ +TY+IL+ + + K A LF MV G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 469 NPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
PD+ Y L+ C K++++ + F++ + + YT++I G + G + A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 529 YFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
F + G P+ +TY +ISGLCK+ L EA M G +P + T TL +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 589 KQGD-SATAMIILE 601
+ GD +A+A +I E
Sbjct: 555 RDGDLTASAKLIEE 568
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 12/462 (2%)
Query: 163 FAEIGRLKEGFSMVIEMTN----NGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
F+ I R K+ F++V++ NG+ TLN ++ C +A V ++ G
Sbjct: 95 FSAIARTKQ-FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D +++ ++ G+V+EA + M++ G D T ++ C G
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG---DTS 210
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
A +LL +M + K +V+T++ +ID LC+ G + A LF K + + K +V TY ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSL 269
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
+ G CK K N +LL+ M + ++PN T+ L+ K G + A +L M G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
+PNI YN ++DG C + R+ EA +L + + D +T+T L+ + +
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+F + K GL + Y+ L+ FC+ K+K +E+ FQE ++ G+ P TY ++ G
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+G + A++ F+ + + + Y +I G+CK K+++A + S+ KG+ P +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIR 617
T + CK+G + A I+L +++ T NTLIR
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 7/421 (1%)
Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
G+ + + +M+ +CR + A L ++ G D T LI G +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL---FLEGKV 174
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
+A L++ MV G +P+V T+ +++G+C+ G T A L K+ N K +V TY+
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYST 233
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+I C++ ++ A L + M+ +G+ + TY SL+ G CK G + L+ M
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
PN+ +N ++D K+G++QEA EL K+ R + + ITY L+ + Q +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
+ MV+ +PDI +T+LI +C K++ + K F+ GL TY+ ++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
+ G I A + FQ M G PD +TYG L+ GLC KL++A + +E + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 578 VTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCSEKRVGMAALFFHK 634
V T+ CK G A + SL K + T +I LC + + A + K
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 635 L 635
+
Sbjct: 534 M 534
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 193/374 (51%), Gaps = 8/374 (2%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
T + ++ C G ++ A +F EM +G+ + +Y +V C+ G+ + L M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
+ R + + T +L+ F +G +++A EL +EM+ +G PN+ T+ L+DG C +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEG---KLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
+A + +VR + P++ T+T++I GYC ++++ + + ++GL+ N T
Sbjct: 347 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
Y+ L+ G C+ G + A +L M G P++ Y ++DGLC G++++A E+ +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ ++ + YT ++ K + + A LFC + G+ P++ YT +I+ C++ +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPD----NITY 545
E+ ++ G P TY ++I +LRDG+++++ K + M G + D +
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 546 GALISGLCKQSKLD 559
L+SG +S LD
Sbjct: 586 DMLLSGELDKSFLD 599
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 4/408 (0%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
G++ E +V M NG T N +V C G A ++ +M R V AD +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
++ + CR G + A M +G T L+ C G LL++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKD 288
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
MV + PNV T VL+D K+G ++A L+ +++ + PN+ TY ++ GYC +
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQN 347
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
+++ A +L+ M P+ T+TSLI G+C V + + + K G N Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
++ G C+ G+++ A EL ++ + D +TY ILL + ++AL +F + K+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
++ I YTT+I C+ K++++ F G+ P TYT MI G + G++S A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
++M + G AP++ TY LI + L + + E M G S
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 4/362 (1%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF +++RS P++ ++ S + ++ N ++++ G+ N T
Sbjct: 70 DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
+I C+ AY ++ + K G P+ +N +I GL +G+V EA L+ + +
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
Q D +TY +++ + +T AL L +M + + D+ Y+T+I + CR + +
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
F+E T G+ + TY S++ G + G + + M P+ IT+ L+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
K+ KL EA + Y+ MI +GISP +T TL YC Q + A +L+ + + I
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQR 669
T +LI+ C KRV F + + + V+ + L +S K L +L Q
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 670 IA 671
+
Sbjct: 429 MV 430
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 171/652 (26%), Positives = 299/652 (45%), Gaps = 65/652 (9%)
Query: 16 PSRTPSLTLFVIRSLCYQTHHHNFLANSKQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQ 75
PS +P + V+RSL HH F A++K S +S + SL ++C+ +L +
Sbjct: 74 PSDSPLPLISVVRSLL---SHHKF-ADAKSLLVSYIRTSDA---SL--SLCNSLL---HP 121
Query: 76 QFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRL 135
HL SPP DI +++ +E VAL F I K + +
Sbjct: 122 NLHL--SPPPSKALFDI----------ALSAYLHEGKPHVALQIFQKMIRL-KLKPNL-- 166
Query: 136 YIVCATSLI------SNGNFERAHEVMQCMV---------------SSFAEIGRLKEGFS 174
+ C T LI S+ + A EV MV + + G+L++
Sbjct: 167 -LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 175 MVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAY 233
M+ M + + T N ++ + G + +E+ +M G+ + +Y +V Y
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285
Query: 234 CRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWK 293
C++G + EA + + M + D T +LI C+ G S+++ EL++ M +
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG---SMREGLELMDAMKSLKLQ 342
Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
P+V T+ LIDG + G + +A R ++ + +D K N T+ + CKEEK E
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEA-RKLMEQMENDGVKANQVTHNISLKWLCKEEK---REA 398
Query: 354 LLERMKE----QGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
+ ++KE G P+ TY +LI + KVG+ A ++M MG++G N N I+
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
D LCK+ ++ EA+ LL A +R D++TY L+ ++ + ++AL ++ M K +
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
P + + +LI C K + + + F E +GL P T+ S+I GY ++G + A ++
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
+ + PDN T L++GLCK+ ++A F+ ++I + VT T+ +CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCK 637
Query: 590 QGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGK 638
A +L +++K T N+ I L + ++ K GK
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 29/433 (6%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ G ++EG ++ M + L T N ++ ELGL A ++ ++M G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLD-RGAILDNATLTLLITAFCDKGFRGSI 277
V A+ ++ + + C+ + R + ++D G D T LI A+ G +
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK---VGDL 432
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
A E++ EM +KG K N T ++D LCK+ ++A L L + + TY
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL-LNSAHKRGFIVDEVTYGT 491
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+I G+ +EEK+ +A + + MK+ + P +T+ SLI G C G E A + D + + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
P+ +N+II G CK+GRV++A+E ++ + + D T ILL+ K+ T++AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
F +++ D Y T+I+AFC+ KK+KE+ E GL P + TY S I
Sbjct: 612 NFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 518 LRDGNISSAVKYFQRMN-QIGCAPDN----------------------ITYGALISGLCK 554
+ DG +S + ++ + + G + I Y +I LC
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 555 QSKLDEACQFYES 567
+ +L E + Y S
Sbjct: 731 RGRLKEHSRSYTS 743
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 5/434 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
M+ F ++GRL + EM + T N ++ C+ G + E + EM G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + SY +V A+C+ G + +A ++ M G + + T T LI A C G ++
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG---NLS 419
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
AF L EM++ G + NV T+T LIDGLC ++A LF K+ + PN+ +Y A+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNAL 478
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G+ K + M+RA LL +K +G+ P+ Y + I+G C + E A +M+ M + G
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
N Y ++D K G E LL + + +++ +T+ +L+ K +A+
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 459 LFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGY 517
F R+ GL + +T +I C+ +++ + F++ + GL P + YTS++ G
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 518 LRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
+ GN+ A+ +M +IG D + Y +L+ GL ++L +A F E MIG+GI P E
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 578 VTRVTLAYEYCKQG 591
V +++ ++ + G
Sbjct: 719 VLCISVLKKHYELG 732
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 153/611 (25%), Positives = 257/611 (42%), Gaps = 73/611 (11%)
Query: 115 VALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFA---------- 164
+A FF W++ F+H + Y + A L + A+ V++ MV S A
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183
Query: 165 --------------------EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
++G L+E +M + T + N ++ +LG
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
+ + F +M G +Y +M+ C+ G V A M RG + D T +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
I F G G + EEM +P+V T+ LI+ CK G F + ++
Sbjct: 304 IDGF---GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE-FYREMK 359
Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
+ KPNV +Y+ ++ +CKE M +A M+ GL+PN TYTSLI +CK+GN
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 385 RAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILL 444
A+ L + M + G N+ Y A+IDGLC R++EA EL K + + +Y L+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 445 SEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
+K +AL L + G+ PD+ Y T I C +K++ ++ E G+
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 505 PTKETYTSMICGYLRDGN-----------------------------------ISSAVKY 529
YT+++ Y + GN +S AV Y
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 530 FQRM-NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYC 588
F R+ N G + + A+I GLCK ++++ A +E M+ KG+ P +L
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 589 KQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
KQG+ A+ + + + + KL + +L+ L ++ A F +++G+ + D V
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Query: 646 SLAALKNACYE 656
++ YE
Sbjct: 720 LCISVLKKHYE 730
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 42/407 (10%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F + G+L G EM NGL + + +V C+ G+++ A + + +M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y ++ A C++G +++A R + ML G + T T LI CD +K
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE---RMK 454
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A EL +M G PN+ ++ LI G K ++A L L ++ KP++ Y
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL-LNELKGRGIKPDLLLYGTF 513
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE-- 396
I G C EK+ A++++ MKE G+ N+ YT+L+ + K GN L+D M KE
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELD 572
Query: 397 -----------------------------------GCTPNIYAYNAIIDGLCKKGRVQEA 421
G N + A+IDGLCK +V+ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 422 YELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAA 481
L ++ Q+ L D+ YT L+ + KQ +AL L +M + G+ D+ AYT+L+
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 482 FCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVK 528
+++++ F +E I G+ P + S++ + G I AV+
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 32/342 (9%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ + +IG L + F + EM G+ T ++ C+ ++ AEE+F +M G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC--------- 269
V + +SY ++ + + + A L+ + RG D I C
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 270 ----------------------DKGFR-GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGL 306
D F+ G+ + LL+EM + V T VLIDGL
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 307 CKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPN 366
CK KA F ++ + N +TAMI G CK+ ++ A L E+M ++GL+P+
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
YTSL+ G+ K GN A L D M + G ++ AY +++ GL ++Q+A L+
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGL 468
+ + D++ +L +H + +A+ L ++K L
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 191/350 (54%), Gaps = 4/350 (1%)
Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
+LD G L+ +L+ FC +G +I A ++ +E+ ++ +P V + LI+G CK
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEG---NISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
G ++ FRL ++ +S +P+V TY+A+I+ CKE KM+ A L + M ++GL+PN
Sbjct: 288 VGNLDEGFRLKHQMEKS-RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
+T+LI+GH + G + + M +G P+I YN +++G CK G + A ++
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
+R L+ DKITYT L+ + + + AL + M + G+ D ++ L+ C++ ++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
++E+ +E + AG+ P TYT M+ + + G+ + K + M G P +TY L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
++GLCK ++ A ++M+ G+ P ++T TL + + +S+ I
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI 576
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 207/412 (50%), Gaps = 7/412 (1%)
Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
L+ + R G+ + + ++S + R + + L+ + D GF Q F L
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSR-- 197
Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
+ + + L+D + K T + +++++ + + NV+ + +++ +CKE
Sbjct: 198 -KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA-GFPLNVYVFNILMNKFCKEGN 255
Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
++ A+ + + + ++ L P ++ +LI G+CKVGN + + L M K P+++ Y+A
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 408 IIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAG 467
+I+ LCK+ ++ A+ L + +R L + + +T L+ H + E + +M+ G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 468 LNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAV 527
L PDI Y TL+ FC+ + + I GL P K TYT++I G+ R G++ +A+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Query: 528 KYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEY 587
+ + M+Q G D + + AL+ G+CK+ ++ +A + M+ GI P +VT + +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495
Query: 588 CKQGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLL 636
CK+GD+ T +L+ + + +V N L+ LC ++ A + +L
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 193/386 (50%), Gaps = 9/386 (2%)
Query: 172 GFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVV 231
GF M E+ + G PL N ++ C+ G + A++VFDE+ R + S+ ++
Sbjct: 226 GFYM--EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 232 AYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKG 291
YC++G + E R M D T + LI A C + + A L +EM ++G
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE---NKMDGAHGLFDEMCKRG 340
Query: 292 WKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
PN T LI G + G + + K++ S +P++ Y +++G+CK + A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKML-SKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
+++ M +GL P+ TYT+LI G C+ G+ E A ++ M + G + ++A++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
+CK+GRV +A L++ + ++ D +TYT+++ K+ + + L M G P
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
+ Y L+ C+ +MK ++ + G+ P TY +++ G+ R N S+ +Y Q
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN--SSKRYIQ 577
Query: 532 RMNQIGCAPDNITYGALISGLCKQSK 557
+ +IG D +Y ++++ L + SK
Sbjct: 578 K-PEIGIVADLASYKSIVNELDRASK 602
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 176/383 (45%), Gaps = 22/383 (5%)
Query: 120 FYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQ---------------CMVSSFA 164
FY I A F + ++ + GN A +V +++ +
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADAS 224
++G L EGF + +M + T + ++ C+ ++ A +FDEMC RG+ +
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 225 SYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELL 284
+ ++ + R G + ML +G D L+ FC G + A ++
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN---GDLVAARNIV 403
Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
+ M+R+G +P+ T+T LIDG C+ G E A + K + + + + ++A++ G CK
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI-RKEMDQNGIELDRVGFSALVCGMCK 462
Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
E ++ AE L M G+ P+ TYT ++ CK G+ + + L+ M +G P++
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
YN +++GLCK G+++ A LL + D ITY LL H + A + + + +
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQKP 579
Query: 465 KAGLNPDIHAYTTLIAAFCRQKK 487
+ G+ D+ +Y +++ R K
Sbjct: 580 EIGIVADLASYKSIVNELDRASK 602
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/555 (27%), Positives = 243/555 (43%), Gaps = 55/555 (9%)
Query: 126 FAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLK---EGFSMVIEMTNN 182
A++R F + V + N N + HE + ++ ++AE G L E + V+E+ ++
Sbjct: 109 LARYRIFNEIEDVLGN--LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS 166
Query: 183 GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEA 242
+I N ++ + + + A +V+DEMC RG D S ++V C G+V
Sbjct: 167 VPDVIAC--NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 243 DRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVL 302
+ + +G I + +I +C G I+ A+ + +E+ KG+ P + T +
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCK---LGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 303 IDGLCKKG-----------WTEKAFRL---FLKLVRSDNY-------------------- 328
I+G CK+G E+ R+ FL + Y
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
KP+V TY +I+ CKE K A L+ ++GL+PN +Y LI +CK ++ A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
L+ M + GC P+I Y +I GL G + +A + K R + D Y +L+S
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
K A LF M+ + PD + Y TLI F R E+ K F ++ G+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
+ +MI G+ R G + A+ RMN+ PD TY +I G KQ + A + + M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-------TVNTLIRKLCS 621
P VT +L +C QGD A E K++ +R T TLIR L
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMA----EETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 622 EKRVGMAALFFHKLL 636
E A+++ +L+
Sbjct: 638 ESSTLEKAVYYWELM 652
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 214/490 (43%), Gaps = 54/490 (11%)
Query: 154 EVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDE 213
E M++ F + G ++ E+ GL + LN ++ G E
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 214 MCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGF 273
+ A D ++Y +++ C+ G+ A +L +G I +N + LI A+C
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK- 394
Query: 274 RGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVH 333
A +LL +M +G KP++ T+ +LI GL G + A + +KL+ P+
Sbjct: 395 --EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-GVSPDAA 451
Query: 334 TYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLM 393
Y ++SG CK + A++L M ++ +LP+ Y +LI G + G+F+ A + L
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Query: 394 GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAET 453
++G ++ +NA+I G C+ G + EA + + + L DK TY+ ++ ++KQ +
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571
Query: 454 KQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
A+ +F M K P++ YT+LI FC Q K +E+ F+E L P TYT++
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Query: 514 ICGYLRDGN-ISSAVKYFQRMNQIGCAPDNITYGALISG--------------------- 551
I ++ + + AV Y++ M C P+ +T+ L+ G
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQS 691
Query: 552 ----------------------------LCKQSKLDEACQFYESMIGKGISPCEVTRVTL 583
LC + AC F + M+ KG SP V+ +
Sbjct: 692 SLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Query: 584 AYEYCKQGDS 593
+ +C G+S
Sbjct: 752 LHGFCVVGNS 761
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 23/328 (7%)
Query: 155 VMQCMVSSFAEIGRLKEG---FSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF 211
V ++ F G E FS+ +E G+ + N ++ C G+++ A
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVE---KGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
+ M + D +Y ++ Y + + A + M + T T LI FC
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC-- 601
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
+G K A E +EM + PNV T+T LI L K+ T + + +L+ ++ PN
Sbjct: 602 -CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 332 VHTYTAMISGYCKE---------EKMNRAEMLL-----ERMKEQGLLPNTNTYTSLIYGH 377
T+ ++ G+ K+ + N + L RMK G + Y S +
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720
Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
C G + A D M K+G +P+ ++ AI+ G C G ++ + +
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVA 780
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVK 465
+ Y+ +L +HL Q +A + MV+
Sbjct: 781 VRYSQVLEQHLPQPVICEASTILHAMVE 808
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 199/403 (49%), Gaps = 10/403 (2%)
Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
+ L+I A C F + +A E+ M + P+ YT+ L+DGLCK+ ++A L
Sbjct: 189 SFNLVIKALCKLRF---VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV-LL 244
Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
L ++S+ P+ Y +I G CK+ + R L++ M +G +PN TY +LI+G C
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
G ++A L++ M C PN Y +I+GL K+ R +A LL +R ++
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
Y++L+S K+ + ++A+ L+ +M + G P+I Y+ L+ CR+ K E+++ I
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
+G P TY+S++ G+ + G AV+ ++ M++ GC+ + Y LI GLC ++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA------MIILESLDKKLWIRTVN 613
EA + M+ GI P V ++ C G A M+ E + + T N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYE 656
L+ LC +K + A + +L + + D ++ N E
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 228/533 (42%), Gaps = 79/533 (14%)
Query: 116 ALSFFYWAIGFAKFRHFMRLYIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSM 175
A+ F+ + + + ++ + +I+ G + R E +V+S +M
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS-----------NM 179
Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
+ ++ NGL + N V+ C+L V+ A EVF M R D +Y ++ C+
Sbjct: 180 NMNISPNGL-----SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPN 295
R+ EA L M G +LI C KG + + +L++ M KG PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG---DLTRVTKLVDNMFLKGCVPN 291
Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
T+ LI GLC KG +KA L ++V S PN TY +I+G K+ + A LL
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
M+E+G N + Y+ LI G K G E A L M ++GC PNI Y+ ++DGLC++
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAY 475
G+ EA E+L + + TY+ L+ K ++A+ ++ M K G + + Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 476 TTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI---CGY--------------- 517
+ LI C ++KE+ + + +T G+ P Y+S+I CG
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 518 ---------------LRDG-----NISSAVKYFQRMNQIGCAPDNITYGA---------- 547
L DG +IS AV M GC PD IT
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 548 -----------LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
L+ L K+ ++ AC E M+GK ++P T + E CK
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 56/432 (12%)
Query: 168 RLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYK 227
R+ E ++ EM + G N ++ C+ G + ++ D M +G + +Y
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 228 LMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
++ C G++ +A L M+ I ++ T LI K R + A LL M
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV-KQRRAT--DAVRLLSSM 353
Query: 288 VRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEK 347
+G+ N + ++VLI GL K+G E+A L+ K+ KPN+ Y+ ++ G C+E K
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGK 412
Query: 348 MNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNA 407
N A+ +L RM G LPN TY+SL+ G K G E A + M K GC+ N + Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 408 IIDGLCKKGRVQEAYELLKKAF-------------------------------------- 429
+IDGLC GRV+EA + K
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ + Q D +TY ILL Q + +A+ L M+ G +PD+ T + +
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
+ + F E + L L+ +S A + M AP T+ ++
Sbjct: 593 DKGRSFLEELVVRL--------------LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
Query: 550 SGLCKQSKLDEA 561
+CK K++ A
Sbjct: 639 REICKPKKINAA 650
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 129/343 (37%), Gaps = 67/343 (19%)
Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
+EK F+ K+ ++K T ++MI Y + E LL R++ + + ++
Sbjct: 60 SEKMFKSAPKM---GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI 116
Query: 372 SLIYGHCKVGNFERAYDLMDLMGKE-GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
+ + K ++A DL M E C ++ ++N++++ + +G E
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF------ 170
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
Y +++ ++ ++P+ ++ +I A C+ + +
Sbjct: 171 ---------YDYVVNSNMNM----------------NISPNGLSFNLVIKALCKLRFVDR 205
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
+ + F+ P TY +++ G ++ I AV M GC+P + Y LI
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR 610
GLCK+ L + ++M KG P EVT
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVT------------------------------- 294
Query: 611 TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
NTLI LC + ++ A +++ + V+ L N
Sbjct: 295 -YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
GL E A +V+ EM G + Y +++ C +GRV EA S ML G D
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMV---RKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
+ +I C G S+ A +L EM+ +P+V T+ +L+DGLC + +A L
Sbjct: 506 SSIIKGLCGIG---SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 319 FLKLVRSDNYKPNVHTYTAMI------SGYC---------------KEEKMNRAEMLLER 357
++ P+V T + S C K ++++ A ++E
Sbjct: 563 LNSML-DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
M + L P T+T+ ++ CK A D
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 4/425 (0%)
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
EMT+ G+ + C +E AE++F+ M GV + +Y M+ YC+ G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
V +A +L + + L+ FC + A L MV+ G PN+Y
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR---ELVTARSLFVHMVKFGVDPNLY 340
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
+ LI G CK G +A L L + S N P+V TYT +I+G C E+++ A L ++
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGL-LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
MK + + P++ TY SLI+G+CK N E+A DL M G PNI ++ +IDG C
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
++ A L + + + D +TYT L+ H K+A K+AL L+ M++AG++P+ H +
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
L+ F ++ ++ + F+QE +T +I G ++G I A ++F M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAM 597
PD +Y +++ G ++ ++ + MI GI P + LA Y G +A
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Query: 598 IILES 602
+ S
Sbjct: 640 FLTNS 644
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 191/374 (51%), Gaps = 4/374 (1%)
Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
GL E++ DEM + G+ + Y + ++ CR ++ EA++ M G + + T
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLK 321
+ +I +C G +++QA+ L +E++ PNV L+DG CK A LF+
Sbjct: 273 SAMIDGYCKTG---NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 322 LVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVG 381
+V+ PN++ Y +I G+CK M A LL M+ L P+ TYT LI G C
Sbjct: 330 MVKF-GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYT 441
A L M E P+ YN++I G CK+ +++A +L + ++ + IT++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 442 ILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITA 501
L+ + + K A+GL+ M G+ PD+ YT LI A ++ MKE+ + + + + A
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 502 GLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
G+ P T+ ++ G+ ++G +S A+ ++Q NQ +++ + LI GLC+ + A
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 562 CQFYESMIGKGISP 575
+F+ M GI+P
Sbjct: 569 SRFFSDMRSCGITP 582
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 214/440 (48%), Gaps = 12/440 (2%)
Query: 200 ELGLVEYAEEVFDEM-CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDN 258
E+GL E A V EM C+ D+ + ++ R R M+ RG + D
Sbjct: 144 EMGLFEEALWVSREMKCS----PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPD- 198
Query: 259 ATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL 318
+ ++ C K +G + +LL+EM G KPNVY +T+ I LC+ E+A ++
Sbjct: 199 VHIYFVLFQCCFK--QGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 319 FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHC 378
F +L++ PN++TY+AMI GYCK + +A L + + LLPN + +L+ G C
Sbjct: 257 F-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 379 KVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKI 438
K A L M K G PN+Y YN +I G CK G + EA LL + L D
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 439 TYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
TYTIL++ + + +A LF +M + P Y +LI +C++ M+++ E
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
+G+ P T++++I GY +I +A+ + M G PD +TY ALI K++ +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--LWIRTVNT-L 615
EA + Y M+ GI P + T L + K+G + A+ + +++ W T L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 616 IRKLCSEKRVGMAALFFHKL 635
I LC + A+ FF +
Sbjct: 556 IEGLCQNGYILRASRFFSDM 575
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 7/372 (1%)
Query: 226 YKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLE 285
+ L+++ + MG EA W+S + D+ ++ + S+ ++L
Sbjct: 135 FSLLIMEFLEMGLFEEA-LWVSREMKCSP--DSKACLSILNGLVRRRRFDSVWVDYQL-- 189
Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 345
M+ +G P+V+ + VL K+G K +L L + S KPNV+ YT I C++
Sbjct: 190 -MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL-LDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 346 EKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAY 405
KM AE + E MK+ G+LPN TY+++I G+CK GN +AY L + PN+ +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 406 NAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVK 465
++DG CK + A L + + + Y L+ H K +A+GL M
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 466 AGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISS 525
L+PD+ YT LI C + ++ E+ + FQ+ +FP+ TY S+I GY ++ N+
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 526 AVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAY 585
A+ M G P+ IT+ LI G C + A Y M KGI P VT L
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 586 EYCKQGDSATAM 597
+ K+ + A+
Sbjct: 488 AHFKEANMKEAL 499
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 166/368 (45%), Gaps = 4/368 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
M+ + + G +++ + + E+ L +V C+ + A +F M G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V + Y ++ +C+ G + EA LS M D T T+LI C +
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC---IEDQVA 391
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A L ++M + P+ T+ LI G CK+ E+A L ++ S +PN+ T++ +
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTL 450
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I GYC + A L M +G++P+ TYT+LI H K N + A L M + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PN + + ++DG K+GR+ A + ++ Q+ + + +T L+ + +A
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
F M G+ PDI +Y +++ ++K++ ++ + I G+ P + Y
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQ 630
Query: 519 RDGNISSA 526
+G + SA
Sbjct: 631 ANGYVKSA 638
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 29/349 (8%)
Query: 313 EKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRA----EMLLERMKEQGLLPNT 367
E+AF+LF RS K N + +++A+I K A + L+ER+K N
Sbjct: 55 EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114
Query: 368 N------------------TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAII 409
+ ++ LI ++G FE A + M C+P+ A +I+
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSIL 171
Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
+GL ++ R + + R L D Y +L KQ + L M G+
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
P+++ YT I CR KM+E+EK F+ G+ P TY++MI GY + GN+ A
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
++ + P+ + +G L+ G CK +L A + M+ G+ P L + +CK
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 590 QGDSATAMIIL---ESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
G+ A+ +L ESL+ + T LI LC E +V A F K+
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 228/477 (47%), Gaps = 4/477 (0%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++S+ A++ + + S+ +M G+ T + + C + A V +M G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D + ++ YC R+++A + M++ G D T T LI
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF---LHNKAS 205
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A L+++MV++G +P++ T+ +++GLCK+G + A L K+ + K NV + +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTI 264
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I CK + A L M+ +G+ PN TY SLI C G + A L+ M ++
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PN+ +NA+ID K+G++ EA +L ++ QR + D ITY +L++ +A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+F MV P+I Y TLI FC+ K++++ + F+E GL TYT++I G+
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ G+ SA F++M D +TY L+ GLC KLD A ++ + +
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
T+ CK G A + SL K + T NT+I LCS++ + A F K+
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 7/448 (1%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
N+++ ++ E + ++M G+ D +Y + + +CR +++ A L+ M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
G D TL+ L+ +C I A L+++MV G+KP+ +T T LI GL
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSK---RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
+A L ++V+ +P++ TY +++G CK ++ A LL +M+ + N +
Sbjct: 203 KASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
++I CK + E A DL M +G PN+ YN++I+ LC GR +A LL +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
+++ + +T+ L+ K+ + +A L M++ ++PD Y LI FC ++ E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
+++ F+ ++ P +TY ++I G+ + + V+ F+ M+Q G + +TY +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KL 607
G + D A ++ M+ + +T L + C G TA++I + L K +L
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKL 635
I NT+I +C +VG A F L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 192/371 (51%), Gaps = 8/371 (2%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
N ++ C+ VE A ++F EM +G+ + +Y ++ C GR ++A R LS ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
++ + T LI AF +G + +A +L EEM+++ P+ T+ +LI+G C
Sbjct: 321 EKKINPNVVTFNALIDAFFKEG---KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
++A ++F K + S + PN+ TY +I+G+CK +++ L M ++GL+ NT TY
Sbjct: 378 RLDEAKQMF-KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
T++I G + G+ + A + M +I Y+ ++ GLC G++ A + K +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
E++ + Y ++ K + +A LFC + + PD+ Y T+I+ C ++ ++E
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQE 553
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
++ F++ G P TY ++I LRD + +++ + + M G D T +L++
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVT 612
Query: 551 GLCKQSKLDEA 561
+ +LD++
Sbjct: 613 NMLHDGRLDKS 623
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 205/460 (44%), Gaps = 7/460 (1%)
Query: 156 MQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMC 215
+ +++ + R+ + ++V +M G T T ++ A + D+M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 216 ARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRG 275
RG D +Y +V C+ G + A L+ M + +I + C +R
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK--YR- 272
Query: 276 SIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
++ A +L EM KG +PNV T+ LI+ LC G A RL ++ PNV T+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTF 331
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
A+I + KE K+ AE L E M ++ + P+T TY LI G C + A + M
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQ 455
+ C PNI YN +I+G CK RV++ EL ++ QR L + +TYT ++ + +
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 456 ALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
A +F +MV + DI Y+ L+ C K+ + F+ + + Y +MI
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
G + G + A F + PD +TY +ISGLC + L EA + M G P
Sbjct: 512 GMCKAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTL 615
T TL + D A + +++ + ++ +T+
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI 608
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 206/435 (47%), Gaps = 7/435 (1%)
Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
V+ A ++F +M + ++ A +M + M G D T ++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
I FC R + A +L +M++ G++P++ T + L++G C A L ++V
Sbjct: 124 FINCFCR---RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
YKP+ T+T +I G K + A L+++M ++G P+ TY +++ G CK G+
Sbjct: 181 EM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
+ A +L++ M N+ +N IID LCK V+ A +L + + ++ + +TY L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
++ A L M++ +NP++ + LI AF ++ K+ E+EK +E I +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
P TY +I G+ + A + F+ M C P+ TY LI+G CK ++++ +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLC 620
+ M +G+ VT T+ + + GD +A ++ + + I T + L+ LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 621 SEKRVGMAALFFHKL 635
S ++ A + F L
Sbjct: 480 SYGKLDTALVIFKYL 494
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 3/310 (0%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K++ A L M + P+ + L+ K+ FE L + M G + ++Y Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
I+ C++ ++ A +L K + + D +T + LL+ + A+ L +MV+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G PD +TTLI K E+ + + G P TY +++ G + G+I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
+ +M + + + +I LCK ++ A + M KGI P VT +L
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 587 YCKQGDSATAMIILES-LDKKL--WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
C G + A +L + L+KK+ + T N LI E ++ A +++ + + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 644 RVSLAALKNA 653
++ L N
Sbjct: 363 TITYNLLING 372
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 159 MVSSFAEIGRLKEGFSMVIEM-TNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCAR 217
+++ F RL E M M + + LP I T N ++ C+ VE E+F EM R
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNI-QTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 218 GVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSI 277
G+ + +Y ++ + + G A M+ D T ++L+ C G +
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS---YGKL 484
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
A + + + + + N++ + +I+G+CK G +A+ LF L + KP+V TY
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNT 540
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
MISG C + + A+ L +MKE G LPN+ TY +LI + + + + +L+ M G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAY 422
+ +++ + GR+ +++
Sbjct: 601 FVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 417 RVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYT 476
+V +A +L + + + LLS K + + + L +M G++ D++ Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 477 TLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQI 536
I FCR+ ++ + + + G P T +S++ GY IS AV +M ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 537 GCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
G PD T+ LI GL +K EA + M+ +G P VT T+ CK+GD A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 597 MIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
+ +L ++ K + NT+I LC + V +A F ++ K + V+ +L N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 654 -CYESNKYALFSDLSQRIA 671
C Y +SD S+ ++
Sbjct: 303 LC----NYGRWSDASRLLS 317
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G + S++ +M + ++ C V A +F EM +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y ++ C GR ++A R LS M++R + T + LI AF +G +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLV 342
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +EM+++ P+++T++ LI+G C ++A +F ++ D + PNV TY +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 401
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G+CK +++ L M ++GL+ NT TY +LI G + G+ + A + M +G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+I Y+ ++DGLCK G++++A + + + +++ D TY I++ K + +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LFC + G+ P++ YTT+I+ FCR+ +E++ F+E G P TY ++I L
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
RDG+ +++ + + M G D T +I+ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 227/462 (49%), Gaps = 9/462 (1%)
Query: 168 RLKEGFSMVIEMTNN-GLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
+L + + EM + LP I N+++ ++ + + + M + D SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
+++ +CR ++ A L M+ G D TL+ L+ +C G R I +A L+++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC-HGKR--ISEAVALVDQ 175
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M ++PN T LI GL +A L ++V + +P++ TY +++G CK
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 234
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
++ A LL++M++ + + YT++I C N A +L M +G PN+ YN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
++I LC GR +A LL +R++ + +T++ L+ +K+ + +A L+ M+K
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
++PDI Y++LI FC ++ E++ F+ I+ FP TY ++I G+ + +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
++ F+ M+Q G + +TY LI GL + D A + ++ M+ G+ P +T L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 587 YCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRV 625
CK G A+++ E L K I T N +I +C +V
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 192/398 (48%), Gaps = 6/398 (1%)
Query: 207 AEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI-LDNATLTLLI 265
A + D M ARG D +Y +V C+ G + A L M ++G I D T +I
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTII 262
Query: 266 TAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS 325
A C+ ++ A L EM KG +PNV T+ LI LC G A RL ++
Sbjct: 263 DALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 326 DNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFER 385
PNV T++A+I + KE K+ AE L + M ++ + P+ TY+SLI G C +
Sbjct: 320 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 386 AYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLS 445
A + +LM + C PN+ YN +I G CK RV+E EL ++ QR L + +TY L+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 446 EHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
+ + A +F +MV G+ PDI Y+ L+ C+ K++++ F+ + + P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 506 TKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
TY MI G + G + F ++ G P+ I Y +ISG C++ +EA +
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 566 ESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
M G P T TL + GD A + +++ +
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 4/359 (1%)
Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
++Y++ +LI+ C++ A + K+++ Y+P++ T +++++GYC ++++ A L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
+++M PNT T+ +LI+G A L+D M GC P+++ Y +++GLCK
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
+G + A LLKK + +++AD + YT ++ AL LF M G+ P++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
Y +LI C + ++ + + I + P T++++I ++++G + A K + M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
+ PD TY +LI+G C +LDEA +E MI K P VT TL +CK
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 595 TAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
M + + ++ + T NTLI+ L MA F K++ D ++ + L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 5/281 (1%)
Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
+ A DL M + P+I +N ++ + K + L ++ + D +Y I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 443 LLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG 502
L++ ++++ AL + +M+K G PDI ++L+ +C K++ E+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 503 LFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEAC 562
P T+ ++I G S AV RM GC PD TYG +++GLCK+ +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 563 QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRK 618
+ M I V T+ C + A+ + +D K IR T N+LIR
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 299
Query: 619 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
LC+ R A+ ++ + N + V+ +AL +A + K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 46/367 (12%)
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K++ A L M + LP+ + L+ K+ F+ L + M + ++Y+YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 407 AIIDGLCKKG-----------------------------------RVQEAYELLKKAFQR 431
+I+ C++ R+ EA L+ + F
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
E Q + +T+ L+ + +A+ L RMV G PD+ Y T++ C++ + +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
++ + YT++I N++ A+ F M+ G P+ +TY +LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKK 606
LC + +A + MI + I+P VT L + K+G A +I S+D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----AL 662
++ T ++LI C R+ A F ++ KD + V+ L ++ + L
Sbjct: 360 IF--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 663 FSDLSQR 669
F ++SQR
Sbjct: 418 FREMSQR 424
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 4/412 (0%)
Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
N ++ C++ ++ A V D M ++ D +Y +M+ + C G++ A + L+ +L
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
T T+LI A G + +A +L++EM+ +G KP+++T+ +I G+CK+G
Sbjct: 222 DNCQPTVITYTILIEA---TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
++AF + L +P+V +Y ++ + K E L+ +M + PN TY+
Sbjct: 279 VDRAFEMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
LI C+ G E A +L+ LM ++G TP+ Y+Y+ +I C++GR+ A E L+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
D + Y +L+ K + QAL +F ++ + G +P+ +Y T+ +A +
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
E ++ G+ P + TY SMI R+G + A + M P +TY ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 552 LCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
CK ++++A ESM+G G P E T L G A AM + L
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 234/476 (49%), Gaps = 12/476 (2%)
Query: 198 ACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILD 257
+C G + + + M +G D ++ + + + +A R + +L++ D
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPD 157
Query: 258 NATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFR 317
LI FC I A +L+ M K + P+ T+ ++I LC +G + A +
Sbjct: 158 VFAYNALINGFCKMN---RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 318 LFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGH 377
+ +L+ SDN +P V TYT +I E ++ A L++ M +GL P+ TY ++I G
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 378 CKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
CK G +RA++++ + +GC P++ +YN ++ L +G+ +E +L+ K F + +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
+TY+IL++ + + ++A+ L M + GL PD ++Y LIAAFCR+ ++ + +F +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
I+ G P Y +++ ++G A++ F ++ ++GC+P++ +Y + S L
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG--DSATAMII-LESLDKKLWIRTVNT 614
A M+ GI P E+T ++ C++G D A +++ + S + + T N
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 615 LIRKLCSEKRVGMAALFFHKLLGK----DQNVDRVSLAALKNACYESNKYALFSDL 666
++ C R+ A ++G ++ V + + A Y + L +DL
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 153/316 (48%), Gaps = 4/316 (1%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
G + E ++ EM + GL T N ++ C+ G+V+ A E+ + +G D SY
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
+++ A G+ E ++ ++ M + T ++LIT C G I++A LL+
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD---GKIEEAMNLLKL 358
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
M KG P+ Y++ LI C++G + A FL+ + SD P++ Y +++ CK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
K ++A + ++ E G PN+++Y ++ G+ RA ++ M G P+ YN
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
++I LC++G V EA+ELL E +TY I+L K + A+ + MV
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 467 GLNPDIHAYTTLIAAF 482
G P+ YT LI
Sbjct: 538 GCRPNETTYTVLIEGI 553
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEG-------CT-------------------------- 399
+ + C+ GN+ + L++ M ++G CT
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 400 -PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+++AYNA+I+G CK R+ +A +L + ++ D +TY I++ + + AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ +++ P + YT LI A + + E+ K E ++ GL P TY ++I G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
++G + A + + + GC PD I+Y L+ L Q K +E + M + P V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
T L C+ G AM +L+ + +K + + LI C E R+ +A F +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 636 L 636
+
Sbjct: 395 I 395
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 167 GRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSY 226
G+ +EG ++ +M + T + ++ C G +E A + M +G+ DA SY
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 227 KLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEE 286
++ A+CR GR+ A +L M+ G + D ++ C G QA E+ +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN---GKADQALEIFGK 428
Query: 287 MVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
+ G PN ++ + L G +A + L+++ S+ P+ TY +MIS C+E
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM-SNGIDPDEITYNSMISCLCREG 487
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
++ A LL M+ P+ TY ++ G CK E A ++++ M GC PN Y
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 407 AIIDGLCKKGRVQEAYEL 424
+I+G+ G EA EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 49/239 (20%)
Query: 136 YIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIEMT 180
Y + T+L +G E A +++ M +++F GRL + M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 181 NNG-LPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRV 239
++G LP I + N V+ C+ G + A E+F ++ G ++SSY M A G
Sbjct: 396 SDGCLPDIVN-YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 240 TEADRWLSAMLDRGAILDNATLTLLITAFCDKG----------------FRGS------- 276
A + M+ G D T +I+ C +G F S
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 277 ---------IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSD 326
I+ A +LE MV G +PN T+TVLI+G+ G+ +A L LVR D
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 4/437 (0%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++ SF E G L + + M + GL L +ST N ++ C+ G + AE + EM
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
+ G + S+ ++ C A R++ ML R LT LI+ C
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK---H 496
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
G +A EL + + KG+ + T L+ GLC+ G ++AFR+ +++ V +
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-S 555
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
Y +ISG C ++K++ A M L+ M ++GL P+ TY+ LI G + E A D
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 615
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETK 454
+ G P++Y Y+ +IDG CK R +E E + + +Q + + Y L+ + +
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675
Query: 455 QALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMI 514
AL L M G++P+ YT+LI +++E++ F+E GL P YT++I
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Query: 515 CGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGIS 574
GY + G + + M+ P+ ITY +I G + + EA + M KGI
Sbjct: 736 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795
Query: 575 PCEVTRVTLAYEYCKQG 591
P +T Y Y KQG
Sbjct: 796 PDSITYKEFIYGYLKQG 812
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 219/484 (45%), Gaps = 43/484 (8%)
Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVF---DEMCA 216
+++F + G+++E + +M G+ T N V+ LG+ +E F ++M
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVE 336
Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
RG+ +Y ++V R R+ +A L M +G + LI +F + G S
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---S 393
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRL------------------ 318
+ +A E+ + MV KG T+ LI G CK G + A RL
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 319 ----------------FLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQG 362
F+ + N P T +ISG CK K ++A L + +G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 363 LLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAY 422
+ +T T +L++G C+ G + A+ + + GC + +YN +I G C K ++ EA+
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 423 ELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAF 482
L + +R L+ D TY+IL+ + ++A+ + + G+ PD++ Y+ +I
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 483 CRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDN 542
C+ ++ +E ++FF E ++ + P Y +I Y R G +S A++ + M G +P++
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693
Query: 543 ITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILES 602
TY +LI G+ S+++EA +E M +G+ P L Y K G +L
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753
Query: 603 LDKK 606
+ K
Sbjct: 754 MHSK 757
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 4/448 (0%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V R+ + + ++ EMT G P N ++ E G + A E+ D M ++G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ +S+Y ++ YC+ G+ A+R L ML G ++ + T +I C S
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-- 466
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
A + EM+ + P T LI GLCK G KA L+ + + + + + T A+
Sbjct: 467 -ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNAL 524
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
+ G C+ K++ A + + + +G + + +Y +LI G C + A+ +D M K G
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+ Y Y+ +I GL +V+EA + + + D TY++++ K T++
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
F M+ + P+ Y LI A+CR ++ + + ++ G+ P TYTS+I G
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ A F+ M G P+ Y ALI G K ++ + M K + P ++
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKK 606
T + Y + G+ A +L + +K
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREK 792
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 14/361 (3%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
L ++ C+ G A E++ + +G D + ++ C G++ EA R +L
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
RG ++D + LI+ C K + +AF L+EMV++G KP+ YT+++LI GL
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 602
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
E+A + F + + P+V+TY+ MI G CK E+ + + M + + PNT Y
Sbjct: 603 KVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
LI +C+ G A +L + M +G +PN Y ++I G+ RV+EA L ++
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
L+ + YT L+ + K + + L M ++P+ YT +I + R + E
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
+ + E G+ P TY I GYL+ G + A K D Y A+I
Sbjct: 782 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIE 831
Query: 551 G 551
G
Sbjct: 832 G 832
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 193/431 (44%), Gaps = 11/431 (2%)
Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
R RV AD S L + LLI +C + R A ++ + KG P
Sbjct: 178 RDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFP 237
Query: 295 NVYTHTVLIDGLCKKGWTEK---AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRA 351
+ T +L+ L + +K AF + K V P+V+ +T I+ +CK K+ A
Sbjct: 238 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGV-----SPDVYLFTTAINAFCKGGKVEEA 292
Query: 352 EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDG 411
L +M+E G+ PN T+ ++I G G ++ A+ + M + G P + Y+ ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 412 LCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPD 471
L + R+ +AY +LK+ ++ + I Y L+ ++ +A+ + MV GL+
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
Y TLI +C+ + +E+ +E ++ G + ++TS+IC SA+++
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
M +P LISGLCK K +A + + + KG T L + C+ G
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 592 DSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
A I + + + + + NTLI C +K++ A +F +++ + D + +
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 649 ALKNACYESNK 659
L + NK
Sbjct: 593 ILICGLFNMNK 603
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 211/417 (50%), Gaps = 7/417 (1%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
++M G+ + +Y +++ +CR +++ A L M+ G TL+ L+ +C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC-H 167
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
G R I A L+++MV G++P+ T T LI GL +A L ++V+ +PN
Sbjct: 168 GKR--ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPN 224
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
+ TY +++G CK ++ A LL +M+ + N Y+++I CK + + A +L
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G PN+ Y+++I LC R +A LL +R++ + +T+ L+ +K+
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ +A L+ M+K ++PDI Y++LI FC ++ E++ F+ I+ FP TY
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
++I G+ + I V+ F+ M+Q G + +TY LI G + D A ++ M+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRV 625
G+ P +T TL CK G AM++ E L + + I T N +I +C +V
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 6/428 (1%)
Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
+E + + +++ + R+ + ++V +M G T T ++ A
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL-TLLITA 267
+ D M RG + +Y ++V C+ G + A L+ M + I N + + +I +
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDS 269
Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
C +R A L EM KG +PNV T++ LI LC A RL ++
Sbjct: 270 LCK--YRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-K 325
Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
PNV T+ A+I + KE K+ AE L + M ++ + P+ TY+SLI G C + A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 388 DLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEH 447
+ +LM + C PN+ YN +I+G CK R+ E EL ++ QR L + +TYT L+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 448 LKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK 507
+ + A +F +MV G++P+I Y TL+ C+ K++++ F+ + + PT
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 508 ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYES 567
TY MI G + G + F ++ G PD I Y +ISG C++ +EA +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 568 MIGKGISP 575
M G P
Sbjct: 566 MREDGPLP 573
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 39/391 (9%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L E+M R G N+YT+ +LI+ C++ A L K+++ Y+P++ T +++++GY
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGY 165
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C ++++ A L+++M E G P+T T+T+LI+G A L+D M + GC PN+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
Y +++GLCK+G + A+ LL K +++A+ + Y+ ++ K AL LF
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 463 MVKAGLNPDIHAYTTLIA-----------------------------------AFCRQKK 487
M G+ P++ Y++LI+ AF ++ K
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
+ E+EK + E I + P TY+S+I G+ + A F+ M C P+ +TY
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK- 606
LI+G CK ++DE + + M +G+ VT TL + + + D A ++ + +
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 607 --LWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
I T NTL+ LC ++ A + F L
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 207/433 (47%), Gaps = 4/433 (0%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F ++ +++ +M G TL+ ++ C + A + D+M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D ++ ++ + +EA + M+ RG + T +++ C RG I
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---RGDID 242
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
AF LL +M + NV ++ +ID LCK + A LF ++ + +PNV TY+++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 301
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
IS C E+ + A LL M E+ + PN T+ +LI K G A L D M K
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+I+ Y+++I+G C R+ EA + + ++ + +TY L++ K + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LF M + GL + YTTLI F + + ++ F++ ++ G+ P TY +++ G
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
++G + A+ F+ + + P TY +I G+CK K+++ + S+ KG+ P +
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 579 TRVTLAYEYCKQG 591
T+ +C++G
Sbjct: 542 IYNTMISGFCRKG 554
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 185/351 (52%), Gaps = 4/351 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G + F+++ +M + + V+ C+ + A +F EM +G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V + +Y ++ C R ++A R LS M++R + T LI AF +G +
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG---KLV 347
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +EM+++ P+++T++ LI+G C ++A +F ++ D + PNV TY +
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTL 406
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I+G+CK ++++ L M ++GL+ NT TYT+LI+G + + + A + M +G
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PNI YN ++DGLCK G++++A + + + +++ TY I++ K + +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
LFC + G+ PD+ Y T+I+ FCR+ +E++ F++ G P T
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 176/374 (47%), Gaps = 4/374 (1%)
Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
E ++V M G T VV C+ G ++ A + ++M A + A+ Y ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
+ C+ +A + M ++G + T + LI+ C+ R S A LL +M+ +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE-RWS--DASRLLSDMIER 324
Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
PNV T LID K+G +A +L+ ++++ + P++ TY+++I+G+C ++++
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDE 383
Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
A+ + E M + PN TY +LI G CK + +L M + G N Y +I
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
G + A + K+ + + +TY LL K + ++A+ +F + ++ + P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
I+ Y +I C+ K+++ F G+ P Y +MI G+ R G A F
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 531 QRMNQIGCAPDNIT 544
++M + G PD+ T
Sbjct: 564 RKMREDGPLPDSGT 577
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 12/366 (3%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF +V+S P++ + ++S K +K + L E+M+ G+ N TY
Sbjct: 67 DDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
LI C+ A L+ M K G P+I +++++G C R+ +A L+ + +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
+ D IT+T L+ + +A+ L RMV+ G P++ Y ++ C++ + +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
+ A + Y+++I + + A+ F M G P+ ITY +LIS L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA-----MIILESLDKKL 607
C + +A + MI + I+P VT L + K+G A +I S+D +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 608 WIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK----YALF 663
+ T ++LI C R+ A F ++ KD + V+ L N ++ + LF
Sbjct: 366 F--TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 664 SDLSQR 669
++SQR
Sbjct: 424 REMSQR 429
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKA------------------------ 466
R + Y +L L + A+GLF MVK+
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 467 -----------GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMIC 515
G++ +++ Y LI FCR+ ++ + + + G P+ T +S++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 516 GYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP 575
GY IS AV +M ++G PD IT+ LI GL +K EA + M+ +G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 576 CEVTRVTLAYEYCKQGDSATAMIILESLD-KKLWIRTV--NTLIRKLCSEKRVGMAALFF 632
VT + CK+GD A +L ++ K+ V +T+I LC + A F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 633 HKLLGKDQNVDRVSLAALKNAC--YE--SNKYALFSDLSQR 669
++ K + ++ ++L + YE S+ L SD+ +R
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 5/385 (1%)
Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
N ++ C+ G + A E+ +M +RG+ + SY +++ +CR + A S +L+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQ-AFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
+G +N T ++LI D FR +Q A E++ M + N + +I+GLCK G
Sbjct: 507 KGLKPNNYTYSILI----DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
T KA L ++ + +Y ++I G+ KE +M+ A E M G+ PN TY
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
TSL+ G CK ++A ++ D M +G +I AY A+IDG CK+ ++ A L + +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
L + Y L+S AL L+ +M+K GL D+ YTTLI + +
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
+ + + E GL P + YT ++ G + G VK F+ M + P+ + Y A+I+
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 551 GLCKQSKLDEACQFYESMIGKGISP 575
G ++ LDEA + ++ M+ KGI P
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILP 827
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 45/491 (9%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
+NR + + + A+E++ M A GV D + +L++ A R + EA LS +
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGW-KPNVYTHTVLIDGLCKK 309
+RGA D+ +L + A C + A LL EM K P+ T+T +I K+
Sbjct: 261 ERGAEPDSLLYSLAVQACCKT---LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
G + A RL +++ SD NV T++I+G+CK + A +L ++M+++G PN+ T
Sbjct: 318 GNMDDAIRLKDEML-SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
++ LI K G E+A + M G TP+++ + II G K + +EA +L ++F
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ L A+ +LS KQ +T +A L +M G+ P++ +Y ++ CRQK M
Sbjct: 437 ETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
+ F + GL P TY+ +I G R+ + +A++ M + + Y +I
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 550 SGLC------------------------------------KQSKLDEACQFYESMIGKGI 573
+GLC K+ ++D A YE M G GI
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 574 SPCEVTRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAAL 630
SP +T +L CK A+ + + + KL I LI C + A+
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 631 FFHKLLGKDQN 641
F +LL + N
Sbjct: 676 LFSELLEEGLN 686
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 209/486 (43%), Gaps = 74/486 (15%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
T V+ + + G ++ A + DEM + G+ + + ++ +C+ + A M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY-THTV------- 301
G ++ T ++LI F G +++A E ++M G P+V+ HT+
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKN---GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 302 --------------------------LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTY 335
++ LCK+G T++A L K+ S PNV +Y
Sbjct: 423 QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSY 481
Query: 336 TAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGK 395
++ G+C+++ M+ A ++ + E+GL PN TY+ LI G + + + A ++++ M
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 396 EGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK-------------------AFQRELQAD 436
N Y II+GLCK G+ +A ELL F +E + D
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 437 K-----------------ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
ITYT L++ K QAL + M G+ DI AY LI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
FC++ M+ + F E + GL P++ Y S+I G+ GN+ +A+ +++M + G
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
D TY LI GL K L A + Y M G+ P E+ + K+G + +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 600 LESLDK 605
E + K
Sbjct: 782 FEEMKK 787
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 138/614 (22%), Positives = 246/614 (40%), Gaps = 73/614 (11%)
Query: 23 TLFVIRSLCYQTHHHNFLANS---KQPAFSSTSSSPSPPQSLVKTVCSMVLESYYQQFHL 79
+L V R + + N N Q F S +PS Q L+ + + L
Sbjct: 3 SLLVFRKIPSRIRLRNLRNNKPFCSQSQFPKESENPSQEQRLLVYGSTSEENPVTSKVSL 62
Query: 80 RSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMRLYIVC 139
S+ P + A + L AL F+ WA +
Sbjct: 63 LSAKPE----------QKDDASVIDVLLNRRNNPEAALRFYNWARPW------------- 99
Query: 140 ATSLISNGNFERAHE---VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVG 196
G+FE ++ +VSS GR + + T+N P+ + ++++V
Sbjct: 100 ------RGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVS-TSNPTPMASVLVSKLVD 152
Query: 197 IACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI- 255
A G E+ +R ++ ++ AY + + A ++ ML+ I
Sbjct: 153 SAKSFGF---------EVNSR-------AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIP 196
Query: 256 ---LDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWT 312
N TL+ L+ R S+ +A EL MV G + T +L+ ++
Sbjct: 197 FFPYVNRTLSALVQ-------RNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKP 249
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL-LPNTNTYT 371
+A + + + +P+ Y+ + CK + A LL MKE+ L +P+ TYT
Sbjct: 250 AEALEVLSRAIER-GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
S+I K GN + A L D M +G + N+ A ++I G CK + A L K +
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
+ +T+++L+ K E ++AL + +M GL P + T+I + + +K +E+
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 492 EKFFQEAITAGLFPTK--ETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
K F E+ GL T S +C + G A + +M G P+ ++Y ++
Sbjct: 429 LKLFDESFETGLANVFVCNTILSWLC---KQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLW 608
G C+Q +D A + +++ KG+ P T L + D A+ ++ + +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 609 IRTV--NTLIRKLC 620
+ V T+I LC
Sbjct: 546 VNGVVYQTIINGLC 559
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 144 ISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNG-LPLITSTLNRVVGIACELG 202
+++ N E V Q +++ ++G+ + ++ M L + + N ++ + G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 203 LVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLT 262
++ A ++EMC G+ + +Y ++ C+ R+ +A M ++G LD
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 263 LLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
LI FC R +++ A L E++ +G P+ + LI G G A L+ K+
Sbjct: 659 ALIDGFCK---RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGN 382
++ D + ++ TYT +I G K+ + A L M+ GL+P+ YT ++ G K G
Sbjct: 716 LK-DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 383 FERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTI 442
F + + + M K TPN+ YNA+I G ++G + EA+ L + + + D T+ I
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 443 LLSEHLKQAETKQALGL 459
L+S + + +A L
Sbjct: 835 LVSGQVGNLQPVRAASL 851
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 232/542 (42%), Gaps = 46/542 (8%)
Query: 175 MVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYC 234
+V EM ++G+ + + + + + G++E A+ +FD M A G+ A +Y ++ YC
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 235 RMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKP 294
R V + L M R ++ T ++ C G + A+ +++EM+ G +P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG---DLDGAYNIVKEMIASGCRP 450
Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
NV +T LI + A R+ LK ++ P++ Y ++I G K ++M+ A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRV-LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
L M E GL PN TY + I G+ + F A + M + G PN +I+ CK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
KG+V EA + + + D TYT+L++ K + A +F M G+ PD+ +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
Y LI F + M+++ F E + GL P Y ++ G+ R G I A + M+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
G P+ +TY +I G CK L EA + ++ M KG+ P TL C+ D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 595 TAMIILESLDKKL------------WI-----------------------------RTVN 613
A+ I + K W+ T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 614 TLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA-LFSDLSQRIAE 672
+I LC E + A FH++ + ++ +L N + + A +F + IA
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 673 GI 674
GI
Sbjct: 870 GI 871
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 243/521 (46%), Gaps = 14/521 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ +I RL++ S+++EM + G+ L T + ++ + + A+ + EM + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ Y + + G + +A M+ G I LI +C + +++
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK---NVR 399
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
Q +ELL EM ++ + YT+ ++ G+C G + A+ + +++ S +PNV YT +
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTL 458
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I + + + A +L+ MKEQG+ P+ Y SLI G K + A + M + G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PN + Y A I G + A + +K+ + + +K+ T L++E+ K+ + +A
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ MV G+ D YT L+ + K+ ++E+ F+E G+ P +Y +I G+
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ GN+ A F M + G P+ I Y L+ G C+ ++++A + + M KG+ P V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
T T+ YCK GD A A + + + K + TL+ C V A F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--- 755
Query: 636 LGKDQNVDRVSLA---ALKNACYESNKYALFSDLSQRIAEG 673
G ++ S A AL N ++ K L +++ R+ +G
Sbjct: 756 -GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 89/567 (15%)
Query: 75 QQFHLRSSPPRLNLQIDIDSLTHEQAITVVASLANEAGSMVALSFFYWAIGFAKFRHFMR 134
+Q + R + NL I+I+ E ++V+ S + S + LSFF W +
Sbjct: 43 KQENWRDTLVSSNLSIEINP---EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLD 98
Query: 135 LYIVCATSLISNGNFERAHEVMQCMVSS-------FAEIGRLKEGFSMVIEMTNNGLPLI 187
+ A L + G+FE+A V++ M+ ++ I R + F + +++G+
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEF---VGKSDDGV--- 152
Query: 188 TSTLNRVVGIACE----LGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEAD 243
+ GI + G +E A VF + S K+++ A R R+
Sbjct: 153 ------LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFW 206
Query: 244 RWLSAMLDRGAILDNATLTLLITAFC---------------DKGFRGS---IKQAFELLE 285
M++R + D T +LI A C +K FR + + A +L E
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266
Query: 286 EMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNVHTYTAMISG 341
M+ KG P YT+ VLIDGLCK E A L +++ V DN HTY+ +I G
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN-----HTYSLLIDG 321
Query: 342 Y-----------------------------------CKEEKMNRAEMLLERMKEQGLLPN 366
KE M +A+ L + M GL+P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 367 TNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLK 426
Y SLI G+C+ N + Y+L+ M K + Y Y ++ G+C G + AY ++K
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 427 KAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQK 486
+ + + + YT L+ L+ + A+ + M + G+ PDI Y +LI + K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 487 KMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYG 546
+M E+ F E + GL P TY + I GY+ +SA KY + M + G P+ +
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 547 ALISGLCKQSKLDEACQFYESMIGKGI 573
LI+ CK+ K+ EAC Y SM+ +GI
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGI 588
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 21/487 (4%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++ ++ R+ E S ++EM NGL T + E A++ EM G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS-I 277
V + ++ YC+ G+V EA +M+D+G + D T T+L+ F+ +
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL----FKNDKV 608
Query: 278 KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
A E+ EM KG P+V+++ VLI+G K G +KA +F ++V + PNV Y
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNM 667
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
++ G+C+ ++ +A+ LL+ M +GL PN TY ++I G+CK G+ A+ L D M +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
P+ + Y ++DG C+ V+ A + ++ + + L++ K +T+
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 458 GLFCRMVKAGLN----PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSM 513
+ R++ + P+ Y +I C++ ++ +++ F + A L PT TYTS+
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 514 ICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGI 573
+ GY + G + F G PD+I Y +I+ K+ +A + M K
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 574 --SPCEVTRVT---LAYEYCKQGDSATAMIILESLDKKLWI---RTVNTLIRKLC--SEK 623
C+++ T L + K G+ A ++E++ + +I TV LI + C S +
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Query: 624 RVGMAAL 630
RV A+
Sbjct: 967 RVEADAV 973
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 4/400 (1%)
Query: 204 VEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTL 263
V+ A ++ + M +G+ +Y +++ C++ R+ +A L M G LDN T +L
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 264 LITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLV 323
LI KG + L+ EMV G Y + I + K+G EKA LF ++
Sbjct: 318 LIDGLL-KGRNADAAKG--LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 324 RSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNF 383
S P Y ++I GYC+E+ + + LL MK++ ++ + TY +++ G C G+
Sbjct: 375 AS-GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 384 ERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
+ AY+++ M GC PN+ Y +I + R +A +LK+ ++ + D Y L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
+ K +A MV+ GL P+ Y I+ + + ++K+ +E G+
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 504 FPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQ 563
P K T +I Y + G + A ++ M G D TY L++GL K K+D+A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 564 FYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
+ M GKGI+P + L + K G+ A I + +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 183/435 (42%), Gaps = 54/435 (12%)
Query: 275 GSIKQAFELLEEMVRKGWK-PNVYTHTV------------------LIDGLCKKGWTEKA 315
GS ++A ++E M+ + W V++ V L DG KG+ E+A
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170
Query: 316 FRLF-----LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
+F L+LV P + ++ + +++ + + M E+ ++ + TY
Sbjct: 171 VFVFSSSMGLELV------PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKE---------------------GCTPNIYAYNAII 409
LI HC+ GN + D++ KE G P Y Y+ +I
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284
Query: 410 DGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLN 469
DGLCK R+++A LL + + D TY++L+ LK A GL MV G+N
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344
Query: 470 PDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKY 529
+ Y I ++ M++++ F I +GL P + Y S+I GY R+ N+ +
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 530 FQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK 589
M + TYG ++ G+C LD A + MI G P V TL + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 590 QGDSATAMIILESLDKKLWIRTV---NTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVS 646
AM +L+ + ++ + N+LI L KR+ A F +++ + +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 647 LAALKNACYESNKYA 661
A + E++++A
Sbjct: 525 YGAFISGYIEASEFA 539
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 27/373 (7%)
Query: 134 RLYIVCATSLISNGNFERAHEVMQCM---------------VSSFAEIGRLKEGFSMVIE 178
+ Y V L N + A E+ + M ++ F+++G +++ S+ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 179 MTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGR 238
M GL N ++G C G +E A+E+ DEM +G+ +A +Y ++ YC+ G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 239 VTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYT 298
+ EA R M +G + D+ T L+ C +++A + +KG +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTN-KKGCASSTAP 768
Query: 299 HTVLIDGLCKKGWTEKAFRLFLKLVRS--DNY-KPNVHTYTAMISGYCKEEKMNRAEMLL 355
LI+ + K G TE + +L+ D + KPN TY MI CKE + A+ L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
+M+ L+P TYTSL+ G+ K+G + + D G P+ Y+ II+ K+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 416 GRVQEAYELLKKAFQRELQADKITYTI-----LLSEHLKQAETKQALGLFCRMVKAGLNP 470
G +A L+ + F + D +I LLS K E + A + MV+ P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 471 DIHAYTTLIAAFC 483
D LI C
Sbjct: 949 DSATVIELINESC 961
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 44/259 (16%)
Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE------------------- 396
+++ EQ L ++++ L C G+FE+A +++ M +
Sbjct: 90 QKVTEQKL----DSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFV 145
Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
G + + + + DG KG ++EA + + EL +LL L+
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK-------ESEKFFQEA----------- 498
++ MV+ + D+ Y LI A CR ++ ++EK F+ A
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 499 ---ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQ 555
I GL P K TY +I G + + A M+ +G + DN TY LI GL K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 556 SKLDEACQFYESMIGKGIS 574
D A M+ GI+
Sbjct: 326 RNADAAKGLVHEMVSHGIN 344
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 228/457 (49%), Gaps = 10/457 (2%)
Query: 148 NFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYA 207
N E + +++ F++ G+++E +M +G + + N ++ C+ GL + A
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 208 EEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITA 267
V DEM G+ S+Y + + A C GR+ +A LS+M A D + L+
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHG 383
Query: 268 FCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDN 327
+ G +A L +++ P++ T+ LIDGLC+ G E A RL ++
Sbjct: 384 YIKMG---KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 328 YKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAY 387
+ P+V TYT ++ G+ K ++ A + + M +G+ P+ YT+ G ++G+ ++A+
Sbjct: 441 F-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 388 DLMD-LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSE 446
L + ++ + P++ YN IDGLCK G + +A E +K F+ L D +TYT ++
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
+L+ + K A L+ M++ L P + Y LI + +++++ ++ E G+ P
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
T+ +++ G + GNI A +Y +M + G P+ +Y LIS C K +E + Y+
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 567 SMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
M+ K I P T L +++ ++ + + LE L
Sbjct: 680 EMLDKEIEPDGYTHRAL-FKHLEKDHESREVEFLERL 715
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 42/377 (11%)
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
+ +A + E M+ G P V T ++D K G E+ +++L++ R N + + TY
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTYN 277
Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
+I+G+ K KM A M+ G ++ LI G+CK G F+ A+ + D M
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
G P YN I LC GR+ +A ELL D ++Y L+ ++K + +A
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
LF + ++P I Y TLI C ++ +++ +E T +FP TYT+++ G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 517 YLRDGNISSAVKYFQRMNQIGC------------------------------------AP 540
++++GN+S A + + M + G AP
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513
Query: 541 DNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIIL 600
D Y I GLCK L +A +F + G+ P VT T+ Y + G A +
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 601 -ESLDKKLWIRTVNTLI 616
E L K+L+ + +
Sbjct: 574 DEMLRKRLYPSVITYFV 590
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 342 YCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPN 401
Y K+ + + E+M +G LP+ ++ +A + + M + G P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 402 IYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFC 461
+ +N ++D K G ++ ++ + +R ++ ++TY IL++ K + ++A
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 462 RMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDG 521
M ++G +++ LI +C+Q ++ E + AG++PT TY IC G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 522 NISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRV 581
I A + M APD ++Y L+ G K K EA ++ + I P VT
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 582 TLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGK 638
TL C+ G+ A + E + +L + T TL++ + MA + ++L K
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 21/325 (6%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGL--------- 363
E AFR F + R + K + + AM+ + + M+ A ++ ER + G+
Sbjct: 100 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLID 159
Query: 364 -----LPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRV 418
L L++ + K E+ + M ++G P++ N ++ L +
Sbjct: 160 GSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMM 219
Query: 419 QEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTL 478
+A + + + + IT+ +L K + ++ ++ M + + Y L
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 479 IAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
I F + KM+E+ +F + +G T ++ +I GY + G A M G
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
P TY I LC ++D+A + SM +P V+ TL + Y K G A +
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 599 ILESL---DKKLWIRTVNTLIRKLC 620
+ + L D I T NTLI LC
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLC 420
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 13/228 (5%)
Query: 447 HLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPT 506
+ K++ ++ L F +M++ G P + ++ + M ++ ++ I G+ PT
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 507 KETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYE 566
T+ +M+ + G++ K + M + +TY LI+G K K++EA +F+
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 567 SMIGKGISPCEVTRVTLAYEYCKQG--DSATAMIILESLDKKLW--IRTVNTLIRKLCSE 622
M G + + L YCKQG D A + E L+ ++ T N I LC
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG-VTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 623 KRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDL 666
R+ A +LL D VS L + + K+ LF DL
Sbjct: 357 GRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 4/345 (1%)
Query: 260 TLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLF 319
T +L+ FC + A L +M++ G +P++ T L++G C+ A +F
Sbjct: 118 TCNILLNCFCRCS---QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 320 LKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCK 379
++V YKPNV Y +I G CK ++++ A LL RM++ G+ P+ TY SLI G C
Sbjct: 175 DQMV-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 380 VGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKIT 439
G + A ++ M K P+++ +NA+ID K+GRV EA E ++ +R L D +T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 440 YTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAI 499
Y++L+ + +A +F MV G PD+ Y+ LI +C+ KK++ K F E
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 500 TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLD 559
G+ TYT +I GY R G ++ A + F+RM G P+ ITY L+ GLC K++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 560 EACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
+A M G+ VT + CK G+ A A I SL+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 178/349 (51%), Gaps = 4/349 (1%)
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
L E+M G N+ T +L++ C+ A K+++ ++P++ T+ ++++G+
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGF 161
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
C+ +++ A + ++M G PN Y ++I G CK + A DL++ M K+G P++
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 403 YAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCR 462
YN++I GLC GR +A ++ +RE+ D T+ L+ +K+ +A +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 463 MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGN 522
M++ L+PDI Y+ LI C ++ E+E+ F ++ G FP TY+ +I GY +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 523 ISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVT 582
+ +K F M+Q G + +TY LI G C+ KL+ A + + M+ G+ P +T
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 583 LAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
L + C G A++IL + K I T N +IR +C V A
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 4/382 (1%)
Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
++++M G+ + + +++ +CR +++ A +L M+ G T L+ FC
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
+G R + A + ++MV G+KPNV + +IDGLCK + A L L + D
Sbjct: 163 -RGDR--VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL-LNRMEKDGIG 218
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
P+V TY ++ISG C + + A ++ M ++ + P+ T+ +LI K G A +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
+ M + P+I Y+ +I GLC R+ EA E+ + D +TY+IL++ + K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
+ + + LFC M + G+ + YT LI +CR K+ +E+ F+ + G+ P T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y ++ G +G I A+ M + G D +TY +I G+CK ++ +A Y S+
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 570 GKGISPCEVTRVTLAYEYCKQG 591
+G+ P T T+ K+G
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKG 480
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 4/400 (1%)
Query: 178 EMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMG 237
+M G+P T N ++ C + A +M G ++ ++ +CR
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 238 RVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVY 297
RV +A M+ G + +I C + A +LL M + G P+V
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK---QVDNALDLLNRMEKDGIGPDVV 222
Query: 298 THTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLER 357
T+ LI GLC G A R+ + + + Y P+V T+ A+I KE +++ AE E
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 358 MKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGR 417
M + L P+ TY+ LIYG C + A ++ M +GC P++ Y+ +I+G CK +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 418 VQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTT 477
V+ +L + QR + + +TYTIL+ + + + A +F RMV G++P+I Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 478 LIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIG 537
L+ C K++++ + G+ TY +I G + G ++ A + +N G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 538 CAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCE 577
PD TY ++ GL K+ EA + M GI P E
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 4/327 (1%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ + LF +V+ P++ ++ ++S K +K + L E+M+ G+ N T
Sbjct: 63 DDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
L+ C+ A + M K G P+I + ++++G C+ RV +A + +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
+ + + Y ++ K + AL L RM K G+ PD+ Y +LI+ C + ++
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
+ ++P T+ ++I +++G +S A ++++ M + PD +TY LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR-- 610
C S+LDEA + + M+ KG P VT L YCK M + + ++ +R
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 611 -TVNTLIRKLCSEKRVGMAALFFHKLL 636
T LI+ C ++ +A F +++
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
F R ++ Y +L ++ + +L LF MV+ P I ++ L++A + KK
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
+++ G+ T ++ + R +S A+ + +M ++G P +T+G+L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 549 ISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW 608
++G C+ ++ +A ++ M+G G P V T+ CK A+ +L ++K
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 609 ---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
+ T N+LI LCS R A + ++ D + AL +AC + +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 11/487 (2%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
T N ++G + G EM R +C D +++ +++ C G ++ + M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
G T ++ +C KG K A ELL+ M KG +V T+ +LI LC+
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKG---RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
K + L L+ +R PN TY +I+G+ E K+ A LL M GL PN T
Sbjct: 277 NRIAKGY-LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
+ +LI GH GNF+ A + +M +G TP+ +Y ++DGLCK A +
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ + +ITYT ++ K +A+ L M K G++PDI Y+ LI FC+ + K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
+++ GL P Y+++I R G + A++ ++ M G D+ T+ L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK---K 606
+ LCK K+ EA +F M GI P V+ L Y G+ A + + + K
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----L 662
T +L++ LC + A F L VD V L A +S A L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 663 FSDLSQR 669
F ++ QR
Sbjct: 636 FGEMVQR 642
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 14/509 (2%)
Query: 153 HEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFD 212
H ++ G KE M M GL + ++ C+ + A +
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 213 EMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG 272
M GVC +Y M+ C+ G + EA L+ M G D T + LI FC G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452
Query: 273 FRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 332
K A E++ + R G PN ++ LI C+ G ++A R++ ++ + + +
Sbjct: 453 ---RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
T+ +++ CK K+ AE + M G+LPNT ++ LI G+ G +A+ + D
Sbjct: 510 -TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M K G P + Y +++ GLCK G ++EA + LK D + Y LL+ K
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAG-LFPTKETYT 511
+A+ LF MV+ + PD + YT+LI+ CR+ K + F +EA G + P K YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
+ G + G + + + ++M+ +G PD +T A+I G + K+++ M +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILES------LDKKLWIRTVNTLIRKLCSEKRV 625
P T L + Y K+ D +T+ ++ S L KL T ++L+ +C +
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL---TCHSLVLGICESNML 805
Query: 626 GMAALFFHKLLGKDQNVDRVSLAALKNAC 654
+ + + VDR + L + C
Sbjct: 806 EIGLKILKAFICRGVEVDRYTFNMLISKC 834
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 220/471 (46%), Gaps = 19/471 (4%)
Query: 143 LISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSMVIEMTNNGLPLI 187
L + G+FE++ +MQ M S + + GR K ++ M + G+
Sbjct: 203 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 262
Query: 188 TSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLS 247
T N ++ C + + +M R + + +Y ++ + G+V A + L+
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322
Query: 248 AMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLC 307
ML G ++ T LI +G + K+A ++ M KG P+ ++ VL+DGLC
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEG---NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 308 KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT 367
K + A ++++ R+ + TYT MI G CK ++ A +LL M + G+ P+
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 368 NTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKK 427
TY++LI G CKVG F+ A +++ + + G +PN Y+ +I C+ G ++EA + +
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 428 AFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKK 487
D T+ +L++ K + +A M G+ P+ ++ LI + +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 488 MKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGA 547
++ F E G PT TY S++ G + G++ A K+ + ++ + A D + Y
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 548 LISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMI 598
L++ +CK L +A + M+ + I P T +L C++G + A++
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 230/526 (43%), Gaps = 43/526 (8%)
Query: 151 RAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEV 210
R H +V+S + G++ E + MT++G+ T + + ++ G A V
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565
Query: 211 FDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCD 270
FDEM G +Y ++ C+ G + EA+++L ++ A +D L+TA C
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 271 KGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRS----- 325
G ++ +A L EMV++ P+ YT+T LI GLC+KG T A LF K +
Sbjct: 626 SG---NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVL 681
Query: 326 -----------------------------DN--YKPNVHTYTAMISGYCKEEKMNRAEML 354
DN + P++ T AMI GY + K+ + L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
L M Q PN TY L++G+ K + ++ L + G P+ ++++ G+C+
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 415 KGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHA 474
++ ++LK R ++ D+ T+ +L+S+ E A L M G++ D
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 475 YTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMN 534
+++ R + +ES E G+ P Y +I G R G+I +A + M
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 535 QIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSA 594
P N+ A++ L K K DEA M+ + P + TL + CK G+
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981
Query: 595 TAM---IILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLG 637
A+ +++ + KL + + N LI LC++ + +A + ++ G
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 6/375 (1%)
Query: 145 SNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLV 204
+ GN + C V + G+ K G +M N G T N ++ +G +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 205 EYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLL 264
E ++ EM + + ++Y +++ Y + V+ + +++ G + D T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 265 ITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVR 324
+ C+ ++ ++L+ + +G + + YT +LI C G AF L +K++
Sbjct: 796 VLGICESNM---LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL-VKVMT 851
Query: 325 SDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFE 384
S + T AM+S + + + M+L M +QG+ P + Y LI G C+VG+ +
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911
Query: 385 RAYDLM-DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL 443
A+ + +++ + C PN+ A +A++ L K G+ EA LL+ + +L ++T L
Sbjct: 912 TAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Query: 444 LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL 503
+ K +AL L M GL D+ +Y LI C + M + + ++E G
Sbjct: 971 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Query: 504 FPTKETYTSMICGYL 518
TY ++I G L
Sbjct: 1031 LANATTYKALIRGLL 1045
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/540 (21%), Positives = 198/540 (36%), Gaps = 121/540 (22%)
Query: 131 HFMRLYIVCATSLISNGNFERAHEVMQCMVSS---------------FAEIGRLKEGFSM 175
HF + V TSL G A E M+CM S + G + FS+
Sbjct: 508 HFT--FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565
Query: 176 VIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCR 235
EMT G T ++ C+ G + AE+ + A D Y ++ A C+
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 236 MGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKG-------------FRGSI----- 277
G + +A M+ R + D+ T T LI+ C KG RG++
Sbjct: 626 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685
Query: 278 ---------------KQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL 322
K E+M G P++ T +IDG + G EK L L
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL-LPE 744
Query: 323 VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNT--------------- 367
+ + N PN+ TY ++ GY K + ++ + +L + G+LP+
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 368 --------------------NTYTSLIYGHCKVGNFERAYDLMDLM-------------- 393
T+ LI C G A+DL+ +M
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 394 ---------------------GKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
K+G +P Y +I+GLC+ G ++ A+ + ++ +
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
+ + + ++ K + +A L M+K L P I ++TTL+ C+ + E+
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
+ GL +Y +I G G+++ A + ++ M G + TY ALI GL
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 5/364 (1%)
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
G + F + R N P+V Y +I Y +E + + + M G P+ T
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT 160
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
+++ K G + + M K P++ +N +I+ LC +G +++ L++K
Sbjct: 161 CNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME 220
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ +TY +L + K+ K A+ L M G++ D+ Y LI CR ++
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
+ ++ + P + TY ++I G+ +G + A + M G +P+++T+ ALI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKK--- 606
G + EA + + M KG++P EV+ L CK + A + +
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 607 LWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDL 666
+ T +I LC + A + +++ + D V+ +AL N + ++ ++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 667 SQRI 670
RI
Sbjct: 461 VCRI 464
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 14/344 (4%)
Query: 75 QQFHLRSSPPRLNLQIDIDSLTH----EQAITVVASLANEAGSMVALSFFYWAIGFAKFR 130
Q +L +P + ID + E+ ++ + N+ G ++ G++K +
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 131 HFMRLYIVCATSLISNGNFERAHEVMQC--MVSSFAEIGRLKEGFSMVIEMTNNGLPLIT 188
+++ S+I NG + + C +V E L+ G ++ G+ +
Sbjct: 769 DVSTSFLL-YRSIILNGILP---DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
T N ++ C G + +A ++ M + G+ D + MV R R E+ L
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884
Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
M +G ++ LI C G IK AF + EEM+ P + ++ L K
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVG---DIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
G ++A L L+ + P + ++T ++ CK + A L M GL +
Sbjct: 942 CGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGL 412
+Y LI G C G+ A++L + M +G N Y A+I GL
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 227/471 (48%), Gaps = 26/471 (5%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
+ N ++ C+LG V+ A+ F + G+ S+ +++ C +G + EA S M
Sbjct: 266 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
G D+ T +L F G I A+E++ +M+ KG P+V T+T+L+ G C+
Sbjct: 326 NKHGVEPDSVTYNILAKGF---HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 382
Query: 310 GWTEKAFRLFLKLVRSDNYKPN-VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
G + L LK + S ++ N + + M+SG CK +++ A L +MK GL P+
Sbjct: 383 GNIDMGLVL-LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441
Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
Y+ +I+G CK+G F+ A L D M + PN + A++ GLC+KG + EA LL
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501
Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
D + Y I++ + K ++AL LF +++ G+ P + + +LI +C+ + +
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561
Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
E+ K GL P+ +YT+++ Y GN S + + M G P N+TY +
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 549 ISGLCK-----------QSKLDEAC-QFYESMIGKGISPCEVTRVTLAYEYCKQGDSATA 596
GLC+ + ++ E C Q M +GI P ++T T+ C+ + A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 597 MIILE-----SLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNV 642
+ LE +LD T N LI LC + A F + L ++QNV
Sbjct: 682 FVFLEIMKSRNLDAS--SATYNILIDSLCVYGYIRKADSFIYSL--QEQNV 728
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 24/512 (4%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++S + ++G + S + GL + N ++ C +G + A E+ +M G
Sbjct: 270 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 329
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V D+ +Y ++ + +G ++ A + MLD+G D T T+L+ C G+I
Sbjct: 330 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ---LGNID 386
Query: 279 QAFELLEEMVRKGWKPN-VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTA 337
LL++M+ +G++ N + +V++ GLCK G ++A LF ++ ++D P++ Y+
Sbjct: 387 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSI 445
Query: 338 MISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEG 397
+I G CK K + A L + M ++ +LPN+ T+ +L+ G C+ G A L+D + G
Sbjct: 446 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 505
Query: 398 CTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQAL 457
T +I YN +IDG K G ++EA EL K + + T+ L+ + K +A
Sbjct: 506 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 565
Query: 458 GLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG- 516
+ + GL P + +YTTL+ A+ K ++ +E G+ PT TY+ + G
Sbjct: 566 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 625
Query: 517 -----------YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFY 565
LR+ + + M G PD ITY +I LC+ L A F
Sbjct: 626 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 685
Query: 566 ESMIGKGISPCEVTRVTL-----AYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLC 620
E M + + T L Y Y ++ DS + L+ + L TLI+ C
Sbjct: 686 EIMKSRNLDASSATYNILIDSLCVYGYIRKADS--FIYSLQEQNVSLSKFAYTTLIKAHC 743
Query: 621 SEKRVGMAALFFHKLLGKDQNVDRVSLAALKN 652
+ MA FH+LL + NV +A+ N
Sbjct: 744 VKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 775
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 216/433 (49%), Gaps = 25/433 (5%)
Query: 165 EIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIA--CELGLVEYAEEVFDEMCARGVCAD 222
++G + G ++ +M + G L S + V ++ C+ G ++ A +F++M A G+ D
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFEL-NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 439
Query: 223 ASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFE 282
+Y +++ C++G+ A M D+ + ++ T L+ C KG + +A
Sbjct: 440 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM---LLEARS 496
Query: 283 LLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGY 342
LL+ ++ G ++ + ++IDG K G E+A LF K+V P+V T+ ++I GY
Sbjct: 497 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGY 555
Query: 343 CKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNI 402
CK + + A +L+ +K GL P+ +YT+L+ + GN + +L M EG P
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 615
Query: 403 YAYNAIIDGLCKKGRVQEAYELLK-KAFQ------RELQA-----DKITYTILLSEHLKQ 450
Y+ I GLC+ + + +L+ + F+ R++++ D+ITY ++ ++L +
Sbjct: 616 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII-QYLCR 674
Query: 451 AETKQALGLFCRMVKA-GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
+ +F ++K+ L+ Y LI + C +++++ F + +K
Sbjct: 675 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 734
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
YT++I + G+ AVK F ++ G Y A+I+ LC++ ++E+ F+ M+
Sbjct: 735 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 794
Query: 570 GKGISP----CEV 578
+GISP CEV
Sbjct: 795 SQGISPDLDICEV 807
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 37/343 (10%)
Query: 295 NVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEML 354
N +T++ ++DGLC++ E A LFL+ + P+V ++ +++SGYCK ++ A+
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 286
Query: 355 LERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCK 414
+ + GL+P+ ++ LI G C VG+ A +L M K G P+ YN + G
Sbjct: 287 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346
Query: 415 KGRVQEAYELLKKAFQRELQADKITYTIL------------------------------- 443
G + A+E+++ + L D ITYTIL
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406
Query: 444 -----LSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEA 498
LS K +AL LF +M GL+PD+ AY+ +I C+ K + + E
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466
Query: 499 ITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKL 558
+ P T+ +++ G + G + A + G D + Y +I G K +
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526
Query: 559 DEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILE 601
+EA + ++ +I GI+P T +L Y YCK + A A IL+
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 569
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 331 NVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLM 390
N HTY+ ++ G C+++K+ A + L + + + P+ ++ S++ G+CK+G + A
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 391 DLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQ 450
+ K G P++Y++N +I+GLC G + EA EL + ++ D +TY IL
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347
Query: 451 AETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGL-FPTKET 509
A + M+ GL+PD+ YT L+ C+ + ++ ++ G +
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
+ M+ G + G I A+ F +M G +PD + Y +I GLCK K D A Y+ M
Sbjct: 408 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467
Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAMIILESL 603
K I P T L C++G A +L+SL
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 46/331 (13%)
Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
+L++MK+Q L +T +Y S++Y R D M + KE N + Y+ ++DGLC
Sbjct: 188 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 240
Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
++ ++++A L+ + +++ +++ ++S + K A FC ++K GL P ++
Sbjct: 241 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 300
Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
++ LI C + E+ + + G+ P TY + G+ G IS A + + M
Sbjct: 301 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 360
Query: 534 NQIGCAPDNITY------------------------------------GALISGLCKQSK 557
G +PD ITY ++SGLCK +
Sbjct: 361 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 420
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL-DKKLWI--RTVNT 614
+DEA + M G+SP V + + CK G A+ + + + DK++ RT
Sbjct: 421 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 480
Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRV 645
L+ LC + + A L+ + +D V
Sbjct: 481 LLLGLCQKGMLLEARSLLDSLISSGETLDIV 511
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 198/405 (48%), Gaps = 8/405 (1%)
Query: 190 TLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAM 249
T N V+ C V A + +M G D + +V +CR RV++A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 250 LDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKK 309
++ G D +I + C + AF+ +E+ RKG +PNV T+T L++GLC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTK---RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 310 GWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNT 369
A RL +++ PNV TY+A++ + K K+ A+ L E M + P+ T
Sbjct: 239 SRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 370 YTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAF 429
Y+SLI G C + A + DLM +GC ++ +YN +I+G CK RV++ +L ++
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
QR L ++ +TY L+ + + +A F +M G++PDI Y L+ C +++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
++ F++ + TYT++I G + G + A F ++ G PD +TY ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVT----RVTLAYEYCKQ 590
SGLC + L E Y M +G+ + T +TL+ E K+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 7/369 (1%)
Query: 257 DNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAF 316
D T ++I FC F+ S+ A +L +M++ G++P+ T L++G C++ A
Sbjct: 119 DLYTFNIVINCFC-CCFQVSL--ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 317 RLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYG 376
L K+V YKP++ Y A+I CK +++N A + ++ +G+ PN TYT+L+ G
Sbjct: 176 SLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 377 HCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQAD 436
C + A L+ M K+ TPN+ Y+A++D K G+V EA EL ++ + + D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 437 KITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQ 496
+TY+ L++ +A +F MV G D+ +Y TLI FC+ K++++ K F+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 497 EAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
E GL TY ++I G+ + G++ A ++F +M+ G +PD TY L+ GLC
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 557 KLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVN 613
+L++A +E M + + VT T+ CK G A + SL K I T
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 614 TLIRKLCSE 622
T++ LC++
Sbjct: 475 TMMSGLCTK 483
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 206/408 (50%), Gaps = 14/408 (3%)
Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
+E + +V+ F R+ + S+V +M G N ++ C+ V A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
+ F E+ +G+ + +Y +V C R ++A R LS M+ + + T + L+ AF
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
G + +A EL EEMVR P++ T++ LI+GLC ++A ++F L+ S
Sbjct: 271 VKNG---KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGC 326
Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
+V +Y +I+G+CK +++ L M ++GL+ NT TY +LI G + G+ ++A +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
M G +P+I+ YN ++ GLC G +++A + + +RE+ D +TYT ++
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
K + ++A LFC + GL PDI YTT+++ C + + E E + + GL
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQS 556
T L DG+I+ + + ++M G AP + + SG+CK++
Sbjct: 507 T--------LSDGDITLSAELIKKMLSCGYAPSLLK--DIKSGVCKKA 544
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)
Query: 191 LNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAML 250
NR++ +L + + +M G+ D ++ +++ +C +V+ A L ML
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 251 DRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKG 310
G D T+ L+ FC R + A L+++MV G+KP++ + +ID LCK
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR---RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 311 WTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTY 370
AF F ++ R +PNV TYTA+++G C + + A LL M ++ + PN TY
Sbjct: 205 RVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 371 TSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQ 430
++L+ K G A +L + M + P+I Y+++I+GLC R+ EA ++
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 431 RELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKE 490
+ AD ++Y L++ K + + LF M + GL + Y TLI F + + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 491 SEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALIS 550
+++FF + G+ P TY ++ G +G + A+ F+ M + D +TY +I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 551 GLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
G+CK K++EA + S+ KG+ P VT T+ C +G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 47/366 (12%)
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL----VRSDNYKPNV 332
+ A +L +MV+ P++ L+ + K + L K+ +R+D Y
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY---- 121
Query: 333 HTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDL 392
T+ +I+ +C +++ A +L +M + G P+ T SL+ G C+ A L+D
Sbjct: 122 -TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M + G P+I AYNAIID LCK RV +A++ F +E++
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD-----FFKEIE------------------ 217
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
+ G+ P++ YT L+ C + ++ + + I + P TY++
Sbjct: 218 ------------RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
++ ++++G + A + F+ M ++ PD +TY +LI+GLC ++DEA Q ++ M+ KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAA 629
V+ TL +CK M + + ++ + T NTLI+ V A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 630 LFFHKL 635
FF ++
Sbjct: 386 EFFSQM 391
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 38/245 (15%)
Query: 447 HLKQAETKQALGLFCRMVKA-----------------------------------GLNPD 471
L+ + A+ LF MVK+ G+ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 472 IHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQ 531
++ + +I FC ++ + + + G P + T S++ G+ R +S AV
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 532 RMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQG 591
+M +IG PD + Y A+I LCK ++++A F++ + KGI P VT L C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 592 DSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLA 648
+ A +L + KK + T + L+ +V A F +++ + D V+ +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 649 ALKNA 653
+L N
Sbjct: 300 SLING 304
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 8/422 (1%)
Query: 171 EGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMV 230
E ++ +M GL + T N ++ C G V A + ++M +G+ D +Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 231 VAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRK 290
C+MG A LS M + D + +I C G + F EM+ K
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS---EMLEK 325
Query: 291 GWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNR 350
G PNV+T+ +IDG C G A RL ++ + P+V T+ A+IS KE K+
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFE 384
Query: 351 AEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIID 410
AE L + M + + P+T TY S+IYG CK F+ A + DLM +P++ +N IID
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440
Query: 411 GLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNP 470
C+ RV E +LL++ +R L A+ TY L+ + A LF M+ G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 471 DIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYF 530
D L+ FC +K++E+ + F+ + + Y +I G + + A F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 531 QRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQ 590
+ G PD TY +ISG C +S + +A + M G P T TL K
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 591 GD 592
G+
Sbjct: 621 GE 622
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 9/403 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ ++G K +++ +M + + ++ C+ G A+ +F EM +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y M+ +C GR ++A R L M++R D T LI+A +G +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLF 383
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L +EM+ + P+ T+ +I G CK + A +F L+ S P+V T+ +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTI 438
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I YC+ ++++ LL + +GL+ NT TY +LI+G C+V N A DL M G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+ N ++ G C+ +++EA EL + ++ D + Y I++ K ++ +A
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LFC + G+ PD+ Y +I+ FC + + ++ F + G P TY ++I G L
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
+ G I +++ M G + D T +++ L +LD++
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKS 660
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 224/518 (43%), Gaps = 55/518 (10%)
Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
N+V+G+ + + A ++ +M R + + S+ +++ +C +++ + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 252 RGAILDNATLTLLITAFC----------------DKGFRGSIKQAFELLEEMVRKGWKPN 295
G D T L+ C + GF +A L ++MV G P
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----EAVALFDQMVEIGLTPV 225
Query: 296 VYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLL 355
V T LI+GLC +G +A L K+V +V TY +++G CK A LL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 356 ERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKK 415
+M+E + P+ Y+++I CK G+ A L M ++G PN++ YN +IDG C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 416 GRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGL---------------- 459
GR +A LL+ +RE+ D +T+ L+S +K+ + +A L
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 460 ------FCR---------MVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLF 504
FC+ M +PD+ + T+I +CR K++ E + +E GL
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 505 PTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQF 564
TY ++I G+ N+++A FQ M G PD IT L+ G C+ KL+EA +
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 565 YESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL---DKKLWIRTVNTLIRKLCS 621
+E + I V + + CK A + SL + ++T N +I C
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 622 EKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
+ + A + FHK+ D + L C ++ +
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 10/325 (3%)
Query: 157 QCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCA 216
CM+ F GR + ++ +M + T N ++ + + G + AE++ DEM
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 217 RGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGS 276
R + D +Y M+ +C+ R +A M D A D T +I +C
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYCRA---KR 447
Query: 277 IKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYT 336
+ + +LL E+ R+G N T+ LI G C+ A LF +++ S P+ T
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCN 506
Query: 337 AMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKE 396
++ G+C+ EK+ A L E ++ + +T Y +I+G CK + A+DL +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 397 GCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQA 456
G P++ YN +I G C K + +A L K + D TY L+ LK E ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAA 481
+ L M G + D A+T + A
Sbjct: 627 IELISEMRSNGFSGD--AFTIKMVA 649
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 31/303 (10%)
Query: 347 KMNRAEMLLERMKEQGL--LPNTNTYT------SLIYGHCKVGNFERAYDLMDLMGKEGC 398
++N ++ R+ E+G LP+ T L G + + A D D M +
Sbjct: 43 RLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRP 102
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
N +I + R A L +K R + + ++ IL+ + +L
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
F ++ K G PD+ + TL+ C + ++ E+ F GY+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYM 202
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
+ AV F +M +IG P IT+ LI+GLC + ++ EA M+GKG+ V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDK---KLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
T T+ CK GD+ +A+ +L +++ K + + +I +LC + A F ++
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 636 LGK 638
L K
Sbjct: 323 LEK 325
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 216/459 (47%), Gaps = 36/459 (7%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC-- 269
++M G+ + +Y +++ +CR +++ A L M+ G TL+ L+ +C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 270 --------------DKGFR----------------GSIKQAFELLEEMVRKGWKPNVYTH 299
+ G+R +A L++ MV++G +PN+ T+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 300 TVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMK 359
V+++GLCK+G + AF L K+ + + +V + +I CK ++ A L + M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 360 EQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQ 419
+G+ PN TY+SLI C G + A L+ M ++ PN+ +NA+ID K+G+
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
EA +L +R + D TY L++ +A +F MV PD+ Y TLI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 480 AAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCA 539
FC+ K++++ + F+E GL TYT++I G DG+ +A K F++M G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 540 PDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMII 599
PD +TY L+ GLC KL++A + ++ M I T+ CK G +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 600 LESLD---KKLWIRTVNTLIRKLCSEKRVGMAALFFHKL 635
SL K + T NT+I LCS++ + A K+
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 206/403 (51%), Gaps = 5/403 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+V+ + G + F+++ +M + N ++ C+ V+ A +F EM +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ + +Y ++ C GR ++A + LS M+++ + T LI AF +G
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG---KFV 272
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L ++M+++ P+++T+ LI+G C +KA ++F +V D + P++ TY +
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTL 331
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I G+CK +++ L M +GL+ +T TYT+LI G G+ + A + M +G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P+I Y+ ++DGLC G++++A E+ + E++ D YT ++ K +
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LFC + G+ P++ Y T+I+ C ++ ++E+ ++ G P TY ++I +L
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEA 561
RDG+ +++ + + M D T G L++ + +LD++
Sbjct: 512 RDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 553
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 204/448 (45%), Gaps = 4/448 (0%)
Query: 149 FERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAE 208
+E + + +++ + R+ + ++V +M G T T ++ A
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 209 EVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAF 268
+ D M RG + +Y ++V C+ G + A L+ M D +I +
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 269 CDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNY 328
C +R + A L +EM KG +PNV T++ LI LC G A +L ++
Sbjct: 196 CK--YR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KI 251
Query: 329 KPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYD 388
PN+ T+ A+I + KE K AE L + M ++ + P+ TY SLI G C ++A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 389 LMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHL 448
+ + M + C P++ YN +I G CK RV++ EL ++ R L D +TYT L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 449 KQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKE 508
+ A +F +MV G+ PDI Y+ L+ C K++++ + F + +
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 509 TYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESM 568
YT+MI G + G + F ++ G P+ +TY +ISGLC + L EA + M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 569 IGKGISPCEVTRVTLAYEYCKQGDSATA 596
G P T TL + + GD A +
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 218/496 (43%), Gaps = 40/496 (8%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
++S+ A++ + S+ +M G+ T N ++ C + A + +M G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
+ ++ YC R+++A + M++ G D T T LI
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKAS 132
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKL---------------- 322
+A L++ MV++G +PN+ T+ V+++GLCK+G + AF L K+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 323 ------------------VRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLL 364
+ + +PNV TY+++IS C + + A LL M E+ +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 365 PNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYEL 424
PN T+ +LI K G F A L D M K P+I+ YN++I+G C R+ +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 425 LKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCR 484
+ ++ D TY L+ K + LF M GL D YTTLI
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 485 QKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNIT 544
++K F++ ++ G+ P TY+ ++ G +G + A++ F M + D
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 545 YGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLD 604
Y +I G+CK K+D+ + S+ KG+ P VT T+ C + A +L+ +
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 605 KKLWIR---TVNTLIR 617
+ + T NTLIR
Sbjct: 493 EDGPLPDSGTYNTLIR 508
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 7/315 (2%)
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
P++ + ++S K +K + L E+M+ G+ N TY LI C+ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
+ M K G P+I +++++G C R+ +A L+ + + + D IT+T L+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
+ +A+ L RMV+ G P++ Y ++ C++ + + + A +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
+ ++I + ++ A+ F+ M G P+ +TY +LIS LC + +A Q MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 570 GKGISPCEVTRVTLAYEYCKQGDSATAM-----IILESLDKKLWIRTVNTLIRKLCSEKR 624
K I+P VT L + K+G A +I S+D ++ T N+LI C R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF--TYNSLINGFCMHDR 305
Query: 625 VGMAALFFHKLLGKD 639
+ A F ++ KD
Sbjct: 306 LDKAKQMFEFMVSKD 320
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 9/285 (3%)
Query: 393 MGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAE 452
M K P+I+ +N ++ + K + L +K + + + TY IL++ ++++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 453 TKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTS 512
AL L +M+K G P I ++L+ +C K++ ++ + + G P T+T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 513 MICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKG 572
+I G S AV RM Q GC P+ +TYG +++GLCK+ +D A M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 573 ISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIR----TVNTLIRKLCSEKRVGMA 628
I V T+ CK A+ + + ++ K IR T ++LI LCS R A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESNKYA----LFSDLSQR 669
+ ++ K N + V+ AL +A + K+ L D+ +R
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Score = 36.2 bits (82), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 136 YIVCATSLISNGNFERAHEVMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVV 195
Y + L +NG E+A EV M S EI ++ +IE G+
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKS--EIKLDIYIYTTMIE----GM----------- 440
Query: 196 GIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAI 255
C+ G V+ ++F + +GV + +Y M+ C + EA L M + G +
Sbjct: 441 ---CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 256 LDNATLTLLITAFCDKGFRGSIKQAFELLEEM 287
D+ T LI A G + + + EL+ EM
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAA---SAELIREM 526
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 19/444 (4%)
Query: 144 ISNGNFERAHEVMQCMVSS-----------FAEIGRLKEGFSMVIE----MTNNGLPLIT 188
+ NG FE V MV F + + + +E M ++G+ +
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224
Query: 189 STLNRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSA 248
+L VV C G VE ++++ E +G+ +A +Y ++ AY + + + L
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 249 MLDRGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCK 308
M G + + T TLL+ G + A +L +EM +G + +V+ +T LI C+
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNG---KMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 309 KGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTN 368
KG ++AF LF +L P+ +TY A+I G CK +M AE+L+ M+ +G+
Sbjct: 342 KGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 369 TYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKA 428
+ +LI G+C+ G + A + D+M ++G +++ N I + R EA + L +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 429 FQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKM 488
+ ++ ++YT L+ + K+ ++A LF M G+ P+ Y +I A+C+Q K+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 489 KESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGAL 548
KE+ K G+ P TYTS+I G N+ A++ F M G +++TY +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 549 ISGLCKQSKLDEACQFYESMIGKG 572
ISGL K K DEA Y+ M KG
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 203/440 (46%), Gaps = 39/440 (8%)
Query: 202 GLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATL 261
G+ E VFD M +G+ D S + +VA + R+ M+D G + +L
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 262 TLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLI------------------ 303
T+++ C RG ++++ +L++E KG KP YT+ +I
Sbjct: 228 TIVVEGLCR---RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 304 ---DGLC--------------KKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEE 346
DG+ K G A +LF ++ R + +VH YT++IS C++
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM-RERGIESDVHVYTSLISWNCRKG 343
Query: 347 KMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYN 406
M RA +L + + E+GL P++ TY +LI G CKVG A LM+ M +G +N
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 407 AIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKA 466
+IDG C+KG V EA + Q+ QAD T + S + +A RM++
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 467 GLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSA 526
G+ +YT LI +C++ ++E+++ F E + G+ P TY MI Y + G I A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 527 VKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYE 586
K M G PD+ TY +LI G C +DEA + + M KG+ VT +
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 587 YCKQGDSATAMIILESLDKK 606
K G S A + + + +K
Sbjct: 584 LSKAGKSDEAFGLYDEMKRK 603
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 213/424 (50%), Gaps = 7/424 (1%)
Query: 212 DEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDK 271
++M G+ + +Y +++ +CR R++ A L M+ G D TL L+ FC
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC-H 160
Query: 272 GFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 331
G R I A L+++MV G+KP+ T T LI GL +A L ++V+ +P+
Sbjct: 161 GNR--ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPD 217
Query: 332 VHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMD 391
+ TY A+++G CK + A LL +M+ + N Y+++I CK + + A +L
Sbjct: 218 LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 277
Query: 392 LMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQA 451
M +G PN+ Y+++I LC GR +A LL +R++ + +T++ L+ +K+
Sbjct: 278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Query: 452 ETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYT 511
+ +A L+ M+K ++P+I Y++LI FC ++ E+++ + I P TY
Sbjct: 338 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 512 SMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGK 571
++I G+ + + ++ F+ M+Q G + +TY LI G + D A ++ M+
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 572 GISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMA 628
G+ P +T L CK G A AM++ E L + I T N +I +C + M
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Query: 629 ALFF 632
++F
Sbjct: 518 GIYF 521
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 179/355 (50%), Gaps = 4/355 (1%)
Query: 285 EEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCK 344
E+M G N+YT+ +LI+ C+ A L K+++ Y+P++ T ++++G+C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL-GYEPDIVTLNSLLNGFCH 160
Query: 345 EEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYA 404
+++ A L+++M E G P+T T+T+LI+G A L+D M + GC P++
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 405 YNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMV 464
Y A+++GLCK+G A LL K +++A+ + Y+ ++ K AL LF M
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 465 KAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNIS 524
G+ P++ Y++LI+ C + ++ + + I + P T++++I +++ G +
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 525 SAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLA 584
A K ++ M + P+ TY +LI+G C +L EA Q E MI K P VT TL
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 585 YEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKLL 636
+CK M + + ++ + T TLI + A + F +++
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 4/399 (1%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F RL +++ +M G TLN ++ C + A + D+M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
D ++ ++ + +EA + M+ RG D T ++ C RG
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK---RGDTD 235
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
A LL +M + NV ++ +ID LCK + A LF ++ + +PNV TY+++
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 294
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
IS C + + A LL M E+ + PN T+++LI K G +A L + M K
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PNI+ Y+++I+G C R+ EA ++L+ +++ + +TY L++ K + +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
LF M + GL + YTTLI F + + ++ F++ ++ G+ P TY ++ G
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
++G ++ A+ F+ + + PD TY +I G+CK K
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 8/364 (2%)
Query: 313 EKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTS 372
+ A LF + +S + P++ ++ ++S K K + E+M+ G+ N TY
Sbjct: 60 DDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 373 LIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRE 432
LI C+ A L+ M K G P+I N++++G C R+ +A L+ + +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 433 LQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESE 492
+ D +T+T L+ + +A+ L RMV+ G PD+ Y ++ C++ +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 493 KFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGL 552
+ A + Y+++I + + A+ F M G P+ ITY +LIS L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 553 CKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---I 609
C + +A + MI + I+P VT L + K+G A + E + K+ I
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 610 RTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSD 665
T ++LI C R+G A ++ KD + V+ L N ++ + LF +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 666 LSQR 669
+SQR
Sbjct: 419 MSQR 422
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 426 KKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQ 485
++AF + D Y +L L E A+GLF M ++ P I ++ L++A +
Sbjct: 35 RRAFSGKTSYD---YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKM 91
Query: 486 KKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITY 545
K F ++ G+ TY +I + R +S A+ +M ++G PD +T
Sbjct: 92 NKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTL 151
Query: 546 GALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDK 605
+L++G C +++ +A + M+ G P VT TL + ++ A+ +++ + +
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 606 KLW---IRTVNTLIRKLCSEKRVGMAALFFHKL 635
+ + T ++ LC +A +K+
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 187/347 (53%), Gaps = 7/347 (2%)
Query: 159 MVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARG 218
+++ F + R+ + +V +M G N ++ +C++GLV A E+FD M G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 219 VCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIK 278
V ADA +Y +V C GR ++A R + M+ R + + T T +I F +G
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG---KFS 261
Query: 279 QAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAM 338
+A +L EEM R+ P+V+T+ LI+GLC G ++A + L L+ + P+V TY +
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA-KQMLDLMVTKGCLPDVVTYNTL 320
Query: 339 ISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
I+G+CK ++++ L M ++GL+ +T TY ++I G+ + G + A ++ M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
PNI Y+ ++ GLC RV++A L + + E++ D TY I++ K + A
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFP 505
LF + GL PD+ +YTT+I+ FCR+++ +S+ +++ GL P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 7/384 (1%)
Query: 192 NRVVGIACELGLVEYAEEVFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLD 251
N V+ C A V +M G D + ++ +C+ RV +A +S M +
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 252 RGAILDNATLTLLITAFCDKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGW 311
G D +I C G + A EL + M R G + + T+ L+ GLC G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGL---VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 312 TEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYT 371
A RL +V D PNV T+TA+I + KE K + A L E M + + P+ TY
Sbjct: 225 WSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 372 SLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR 431
SLI G C G + A ++DLM +GC P++ YN +I+G CK RV E +L ++ QR
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 432 ELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKES 491
L D ITY ++ + + A +F RM P+I Y+ L+ C +++++
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKA 400
Query: 492 EKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISG 551
F+ + + TY +I G + GN+ A F+ ++ G PD ++Y +ISG
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 552 LCKQSKLDEACQFYESMIGKGISP 575
C++ + D++ Y M G+ P
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 7/381 (1%)
Query: 210 VFDEMCARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFC 269
+F M G+ D SY +++ CR R A + M+ G D T++ LI FC
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 270 DKGFRGSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYK 329
+G R + A +L+ +M G++P+V + +IDG CK G A LF ++ R D +
Sbjct: 151 -QGNR--VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVR 206
Query: 330 PNVHTYTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDL 389
+ TY ++++G C + + A L+ M + ++PN T+T++I K G F A L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 390 MDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLK 449
+ M + P+++ YN++I+GLC GRV EA ++L + D +TY L++ K
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 450 QAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKET 509
+ LF M + GL D Y T+I + + + +++ F + P T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y+ ++ G + + A+ F+ M + D TY +I G+CK +++A + S+
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 570 GKGISPCEVTRVTLAYEYCKQ 590
KG+ P V+ T+ +C++
Sbjct: 444 CKGLKPDVVSYTTMISGFCRK 464
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 13/362 (3%)
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
A ++ +M++ G++P+V T + LI+G C+ A L K+ ++P+V Y +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTII 181
Query: 340 SGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCT 399
G CK +N A L +RM+ G+ + TY SL+ G C G + A LM M
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 400 PNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTIL---LSEHLKQAETKQA 456
PN+ + A+ID K+G+ EA +L ++ +R + D TY L L H + E KQ
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 457 LGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICG 516
L L MV G PD+ Y TLI FC+ K++ E K F+E GL TY ++I G
Sbjct: 302 LDL---MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 517 YLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPC 576
Y + G +A + F RM+ P+ TY L+ GLC ++++A +E+M I
Sbjct: 359 YFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 577 EVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNTLIRKLCSEKRVGMAALFFH 633
T + + CK G+ A + SL K + + T+I C +++ + L +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 634 KL 635
K+
Sbjct: 476 KM 477
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 11/410 (2%)
Query: 240 TEADRWLS-AMLDRGAILDNATLTLLITAFCDKGF---RGS--IKQAFELLEEMVRKGWK 293
++A+++L+ +L +G N + I+ F + F R S +++ +L +M++
Sbjct: 11 SKANKFLNLCLLQKG----NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPL 66
Query: 294 PNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKMNRAEM 353
P++ + ++ + K + LF + ++++Y +I+ C+ + A
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 354 LLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGCTPNIYAYNAIIDGLC 413
++ +M + G P+ T +SLI G C+ A DL+ M + G P++ YN IIDG C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 414 KKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIH 473
K G V +A EL + + ++AD +TY L++ A L MV + P++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 474 AYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRM 533
+T +I F ++ K E+ K ++E + P TY S+I G G + A + M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 534 NQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDS 593
GC PD +TY LI+G CK ++DE + + M +G+ +T T+ Y + G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 594 ATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVD 643
A I +D + IRT + L+ LC RV A + F + + +D
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 15/299 (5%)
Query: 382 NFERAYDLMDLMGKEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQR----ELQADK 437
N E DL M + P+I ++ ++ + K + Y+L+ F + D
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAK----SKNYDLVISLFHHMEVCGIGHDL 104
Query: 438 ITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQE 497
+Y I+++ + + AL + +M+K G PD+ ++LI FC+ ++ ++ +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 498 AITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSK 557
G P Y ++I G + G ++ AV+ F RM + G D +TY +L++GLC +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 558 LDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESLDKKLW---IRTVNT 614
+A + M+ + I P +T + + K+G + AM + E + ++ + T N+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 615 LIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKY----ALFSDLSQR 669
LI LC RV A ++ K D V+ L N +S + LF +++QR
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 234/500 (46%), Gaps = 9/500 (1%)
Query: 160 VSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEMCARGV 219
+++ + G + + EM ++ + + NR +G+ E AE ++ +M G
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 220 CADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFRGSIKQ 279
+Y + C++ + D LS M G I D + + C + G Q
Sbjct: 76 SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 280 AFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTAMI 339
F MV++G +P+V ++T+LI+GL + G A ++ ++RS P+ A++
Sbjct: 136 TFFC---MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALV 191
Query: 340 SGYCKEEKMNRA-EMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMGKEGC 398
G C K++ A EM+ E +K + +T Y +LI G CK G E+A L M K GC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 399 TPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALG 458
P++ YN +++ ++ A ++ + + +Q D +Y LL H + + +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 459 LFCRMVKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTKETYTSMICGYL 518
+ ++ D+ +Y+TLI FCR +++ + F+E G+ TYTS+I +L
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 519 RDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEV 578
R+GN S A K +M ++G +PD I Y ++ LCK +D+A + MI I+P +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Query: 579 TRVTLAYEYCKQGDSATAMIILESLDKKLWIR---TVNTLIRKLCSEKRVGMAALFFHKL 635
+ +L C+ G A+ + E + K T +I L K++ A + ++
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 636 LGKDQNVDR-VSLAALKNAC 654
+ K +DR VS +K +C
Sbjct: 492 MDKGFTLDRDVSDTLIKASC 511
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 4/283 (1%)
Query: 155 VMQCMVSSFAEIGRLKEGFSMVIEMTNNGLPLITSTLNRVVGIACELGLVEYAEEVFDEM 214
V ++S F + GR+++ ++ M+ G T N ++ + +++ AE V EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 215 CARGVCADASSYKLMVVAYCRMGRVTEADRWLSAMLDRGAILDNATLTLLITAFCDKGFR 274
G+ DA SY ++ +CR+ + ++ ++ D + + LI FC
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRA--- 338
Query: 275 GSIKQAFELLEEMVRKGWKPNVYTHTVLIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHT 334
+ ++A+ L EEM +KG NV T+T LI ++G + A +L ++ P+
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL-GLSPDRIF 397
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
YT ++ CK +++A + M E + P+ +Y SLI G C+ G A L + M
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 395 KEGCTPNIYAYNAIIDGLCKKGRVQEAYELLKKAFQRELQADK 437
+ C P+ + II GL + ++ AY++ + + D+
Sbjct: 458 GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 107/270 (39%), Gaps = 26/270 (9%)
Query: 404 AYNAIIDGLCKKGRVQEAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRM 463
AY + I L K G + A ++ + + Y + ++++ + A ++ M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 464 VKAGLNPDIHAYTTLIAAFCRQKKMKESEKFFQEAITAGLFPTK---ETYTSMICGYLRD 520
G + Y+ I+ C+ KK + + T G P Y ++C R+
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC---RE 127
Query: 521 GNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMIGKGISP----- 575
+ AV+ F M Q G PD ++Y LI+GL + K+ +A + + +MI G+SP
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 576 -------CEVTRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMA 628
C +V LAYE + ++S KL N LI C R+ A
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEE--------IKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 629 ALFFHKLLGKDQNVDRVSLAALKNACYESN 658
+ D V+ L N Y++N
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 138/358 (38%), Gaps = 39/358 (10%)
Query: 335 YTAMISGYCKEEKMNRAEMLLERMKEQGLLPNTNTYTSLIYGHCKVGNFERAYDLMDLMG 394
Y + I+ K ++ A + + M+ + Y I + FE A + M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 395 KEGCTPNIYAYNAIIDGLCK-----------------------------------KGRVQ 419
G + + Y+ I GLCK + +V
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 420 EAYELLKKAFQRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLI 479
A + QR + D ++YTIL++ + + A+ ++ M+++G++PD A L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 480 AAFCRQKKMKESEKFFQEAI-TAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGC 538
C +K+ + + E I +A + + Y ++I G+ + G I A M++IGC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 539 APDNITYGALISGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCK--QGDSATA 596
PD +TY L++ + L A M+ GI + L +C+ D
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 597 MIILESLDKKLW-IRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNA 653
++ E + + + +TLI C A F ++ K ++ V+ +L A
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 510 YTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALISGLCKQSKLDEACQFYESMI 569
Y S I ++ G I +AV+ F M + Y I L ++S+ + A Y M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 570 GKGIS--PCEVTRVTLAYEYCKQGDSATAMII-LESLDKKLWIRTVNTLIRKLCSEKRVG 626
G S P +R K+ D A++ +E+L I N + LC E +VG
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 627 MAALFFHKLLGKDQNVDRVSLAALKNACYESNK 659
A F ++ + + D VS L N + + K
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 87/228 (38%), Gaps = 15/228 (6%)
Query: 430 QRELQADKITYTILLSEHLKQAETKQALGLFCRMVKAGLNPDIHAYTTLIAAFCRQKKMK 489
+ L A ++ Y ++ +K A+ +F M + Y I R+ + +
Sbjct: 2 HQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE 61
Query: 490 ESEKFFQEAITAGLFPTKETYTSMICGYLRDGNISSAVKYFQRMNQIGCAPDNITYGALI 549
+E + + G TY+ I G + M +G PD + +
Sbjct: 62 LAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYL 121
Query: 550 SGLCKQSKLDEACQFYESMIGKGISPCEVTRVTLAYEYCKQGDSATAMIILESL------ 603
LC+++K+ A Q + M+ +G P V+ L + G A+ I ++
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 604 -DKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAAL 650
D K L+ LC ++V +A ++++ ++ RV L+ +
Sbjct: 182 PDNK----ACAALVVGLCHARKVDLA----YEMVAEEIKSARVKLSTV 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,193,317
Number of Sequences: 539616
Number of extensions: 9166715
Number of successful extensions: 34017
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 22454
Number of HSP's gapped (non-prelim): 2978
length of query: 675
length of database: 191,569,459
effective HSP length: 124
effective length of query: 551
effective length of database: 124,657,075
effective search space: 68686048325
effective search space used: 68686048325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)