Query 044821
Match_columns 145
No_of_seqs 126 out of 1090
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 07:05:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044821.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044821hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00820 zip ZIP zinc/iron tr 100.0 3.1E-34 6.7E-39 233.2 15.7 145 1-145 174-318 (324)
2 KOG1558 Fe2+/Zn2+ regulated tr 100.0 7.9E-34 1.7E-38 230.3 13.7 143 1-145 179-321 (327)
3 PLN02159 Fe(2+) transport prot 100.0 3.7E-33 7.9E-38 227.7 15.7 145 1-145 187-331 (337)
4 PF02535 Zip: ZIP Zinc transpo 100.0 2.7E-31 5.8E-36 212.9 13.7 139 2-145 176-314 (317)
5 PRK04201 zinc transporter ZupT 99.9 7.1E-27 1.5E-31 185.4 13.4 132 2-145 125-258 (265)
6 COG0428 Predicted divalent hea 99.9 3E-23 6.4E-28 164.8 11.6 132 2-144 124-257 (266)
7 KOG2693 Putative zinc transpor 99.8 3.7E-20 8.1E-25 155.8 4.1 137 2-144 307-446 (453)
8 KOG3907 ZIP-like zinc transpor 99.6 1.5E-18 3.3E-23 134.5 -8.2 114 3-119 146-264 (303)
9 KOG2694 Putative zinc transpor 99.5 4.7E-14 1E-18 110.9 6.9 135 4-145 218-354 (361)
10 KOG2474 Zinc transporter and r 98.6 9.7E-09 2.1E-13 84.7 1.5 83 35-123 297-380 (406)
11 PRK04201 zinc transporter ZupT 98.5 1.1E-06 2.5E-11 69.8 8.9 83 55-144 4-87 (265)
12 PF02535 Zip: ZIP Zinc transpo 96.3 0.026 5.6E-07 45.1 8.1 53 92-144 36-92 (317)
13 COG0428 Predicted divalent hea 93.2 0.76 1.7E-05 36.7 8.5 83 55-143 7-90 (266)
14 PRK11469 hypothetical protein; 90.5 6.2 0.00013 29.9 12.0 53 27-81 7-59 (188)
15 PLN02159 Fe(2+) transport prot 88.9 4.9 0.00011 33.3 9.4 75 2-76 215-295 (337)
16 KOG1558 Fe2+/Zn2+ regulated tr 86.6 5.6 0.00012 32.8 8.4 68 2-69 207-279 (327)
17 TIGR00820 zip ZIP zinc/iron tr 84.4 21 0.00046 29.2 13.4 48 2-50 202-254 (324)
18 COG1971 Predicted membrane pro 82.4 20 0.00043 27.4 9.6 83 27-111 7-90 (190)
19 TIGR02840 spore_YtaF putative 81.9 21 0.00045 27.3 10.4 76 28-107 5-80 (206)
20 COG5336 Uncharacterized protei 78.2 14 0.0003 25.9 6.4 50 57-108 44-93 (116)
21 PF02659 DUF204: Domain of unk 74.1 18 0.00038 22.3 8.6 42 40-81 4-45 (67)
22 PF14143 YrhC: YrhC-like prote 70.4 7.2 0.00016 25.1 3.3 18 99-118 17-34 (72)
23 TIGR02230 ATPase_gene1 F0F1-AT 70.2 28 0.0006 23.8 6.4 42 63-106 50-91 (100)
24 KOG2694 Putative zinc transpor 68.4 14 0.00031 29.9 5.2 35 87-121 99-133 (361)
25 PF04306 DUF456: Protein of un 66.8 45 0.00098 24.0 10.5 42 31-80 38-79 (140)
26 PF04647 AgrB: Accessory gene 66.2 50 0.0011 24.3 9.3 50 25-74 38-92 (185)
27 PF01925 TauE: Sulfite exporte 47.6 1.2E+02 0.0026 22.8 8.2 51 32-82 36-86 (240)
28 PF02673 BacA: Bacitracin resi 47.4 1.4E+02 0.0031 23.7 9.6 32 48-79 172-203 (259)
29 PF04210 MtrG: Tetrahydrometha 43.3 48 0.001 21.2 3.5 20 94-113 47-66 (70)
30 COG0395 UgpE ABC-type sugar tr 41.3 1.9E+02 0.004 23.3 12.3 88 34-121 86-176 (281)
31 PRK01026 tetrahydromethanopter 39.3 58 0.0013 21.2 3.6 22 94-115 50-71 (77)
32 TIGR01149 mtrG N5-methyltetrah 38.4 61 0.0013 20.7 3.5 23 93-115 46-68 (70)
33 PF11700 ATG22: Vacuole efflux 37.8 2.7E+02 0.0058 24.0 11.1 94 26-120 319-415 (477)
34 PF09527 ATPase_gene1: Putativ 37.5 87 0.0019 18.4 6.4 42 62-105 7-48 (55)
35 PF03092 BT1: BT1 family; Int 34.4 2E+02 0.0044 24.1 7.2 75 43-119 341-417 (433)
36 KOG2474 Zinc transporter and r 32.6 36 0.00079 28.9 2.3 63 47-116 37-99 (406)
37 COG5548 Small integral membran 31.8 1.4E+02 0.003 20.4 4.6 39 62-110 7-45 (105)
38 PF13829 DUF4191: Domain of un 30.3 2.5E+02 0.0054 22.1 6.4 46 56-107 26-71 (224)
39 KOG3626 Organic anion transpor 25.6 1.4E+02 0.0031 27.5 5.0 54 28-81 239-294 (735)
40 PRK09430 djlA Dna-J like membr 25.5 1E+02 0.0022 24.5 3.7 28 57-84 6-33 (267)
41 PF11297 DUF3098: Protein of u 25.3 66 0.0014 20.5 2.1 20 126-145 7-26 (69)
42 cd02431 Ferritin_CCC1_C CCC1-r 24.5 2.8E+02 0.006 20.1 7.4 65 51-118 25-90 (149)
43 PF04298 Zn_peptidase_2: Putat 24.4 3.5E+02 0.0076 21.2 6.8 18 27-44 86-103 (222)
44 PF03741 TerC: Integral membra 20.3 3.8E+02 0.0081 20.0 9.5 52 55-117 30-82 (183)
No 1
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=100.00 E-value=3.1e-34 Score=233.21 Aligned_cols=145 Identities=74% Similarity=1.193 Sum_probs=133.4
Q ss_pred CchhHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGIS 80 (145)
Q Consensus 1 ~l~~~l~~Hs~~eGlalG~~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~ 80 (145)
+|.+|+++||++||+++|++.+.+..+.+++||.+||+||+++++.++.+++.++++.+.+.++|++++|+|+++|+++.
T Consensus 174 ~l~~gl~~Hs~~eGlalG~~~~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~~~ 253 (324)
T TIGR00820 174 VLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGIS 253 (324)
T ss_pred HHHHHHHhcchhhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 47899999999999999999887788999999999999999999999999999999999999999999999999999998
Q ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 81 SVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
+.+++++++..+++++++++++|+|+||++.|++|+|+..++.+++.++++.+++++++|+++|+
T Consensus 254 ~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma 318 (324)
T TIGR00820 254 SSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMS 318 (324)
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 76555566667899999999999999999999999999887766667788999999999999995
No 2
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-34 Score=230.26 Aligned_cols=143 Identities=58% Similarity=0.935 Sum_probs=136.1
Q ss_pred CchhHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGIS 80 (145)
Q Consensus 1 ~l~~~l~~Hs~~eGlalG~~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~ 80 (145)
+|++|+++||++||+++|++.|.+..|.++.|+.+||..|+|++|.++.+++.+++..+.+.++||+++|+|+.+|+.+.
T Consensus 179 iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~i~ 258 (327)
T KOG1558|consen 179 ILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIGIS 258 (327)
T ss_pred HHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 81 SVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
+.+ ++++..++++++|+|+|+|+|+|+++.|++|+|+.+++.|. .|.++.+++++++|+++|+
T Consensus 259 ~~~-~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~-~~~~i~~~i~~~~G~alms 321 (327)
T KOG1558|consen 259 SSY-ENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS-LKLQILKLIALLLGFALMS 321 (327)
T ss_pred ccc-cCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh-HHHHHHHHHHHHHhHHHHH
Confidence 877 67888999999999999999999999999999999988766 7788999999999999995
No 3
>PLN02159 Fe(2+) transport protein
Probab=100.00 E-value=3.7e-33 Score=227.65 Aligned_cols=145 Identities=60% Similarity=0.979 Sum_probs=132.9
Q ss_pred CchhHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGIS 80 (145)
Q Consensus 1 ~l~~~l~~Hs~~eGlalG~~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~ 80 (145)
++.+|+++||++||+++|++.+.+....++++|.+||+||+++++.++.+++.++++.+.+.++|++++|+|+.+|+++.
T Consensus 187 ~l~~gl~lHS~~eGlalG~~~~~~~~~~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~iG~~v~ 266 (337)
T PLN02159 187 VLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALS 266 (337)
T ss_pred HHHHHHHHHHHHhchhhhcCCCchhHHHHHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 47899999999999999999887777889999999999999999999999999999999999999999999999999998
Q ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 81 SVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
+.+++++++..+++++++++++|+|+||++.|++|+|+..++.|++.++|+.+++++++|+++|+
T Consensus 267 ~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Ma 331 (337)
T PLN02159 267 SIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMS 331 (337)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHH
Confidence 77666666666899999999999999999999999999877666666678999999999999995
No 4
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.97 E-value=2.7e-31 Score=212.87 Aligned_cols=139 Identities=35% Similarity=0.566 Sum_probs=124.6
Q ss_pred chhHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044821 2 LELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISS 81 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~ 81 (145)
+.+|+++||++||+++|++.+.+.+|.++++|++||+||+++++.++.+++.++++++.+.++|++++|+|+++|+++..
T Consensus 176 l~~~~~~Hs~~eGl~ig~~~~~~~~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~piG~~ig~~~~~ 255 (317)
T PF02535_consen 176 LLIALSIHSFFEGLAIGAAFSSDSGWSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLSTPIGALIGIAISN 255 (317)
T ss_pred HHHHHHhhcchhhhhhhcchhhhhHHHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 57899999999999999987777799999999999999999999999999999999999999999999999999999922
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 82 VYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 82 ~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
..++...+.+.++++++++|+|+||++.|++||++++++. ++.+..+++++++|+++|+
T Consensus 256 --~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~---~~~~~~~~~~~~~G~~~~~ 314 (317)
T PF02535_consen 256 --SGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHS---RKSRLLKFLGFLIGFLLMA 314 (317)
T ss_pred --cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---hHHHHHHHHHHHHHHHHHH
Confidence 2234456779999999999999999999999999987642 3467899999999999984
No 5
>PRK04201 zinc transporter ZupT; Provisional
Probab=99.95 E-value=7.1e-27 Score=185.35 Aligned_cols=132 Identities=23% Similarity=0.338 Sum_probs=114.2
Q ss_pred chhHHHHHHHHHHHHHhh--ccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 2 LELGILVHSVIIGISLGA--SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGI 79 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~--~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i 79 (145)
+.+|+++||++||+++|+ .++.+.++.++++|.+||+||+++++.++.+++.+++|++.+..++++++|+|+++|+++
T Consensus 125 ~~~a~~lH~~~eGlalg~~~~~~~~~g~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~ 204 (265)
T PRK04201 125 TALAISIHNFPEGIATFVAALSNPELGFPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLL 204 (265)
T ss_pred HHHHHHHHhcchhhhhhhhhhcchhhHHHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 467788999999999999999999999999999999999999999999999999999988
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 80 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
.+.. ..+.+.++++++++|+|+||++.|++||..+.++ +..+..++++|+.+|+
T Consensus 205 ~~~~-----~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~-------~~~~~~~~~~G~~~m~ 258 (265)
T PRK04201 205 LGPF-----ISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGP-------HHLPSYGLIAGMAVMA 258 (265)
T ss_pred Hccc-----cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------chHHHHHHHHHHHHHH
Confidence 6421 1234789999999999999999999999766432 2246889999998873
No 6
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=3e-23 Score=164.85 Aligned_cols=132 Identities=23% Similarity=0.298 Sum_probs=115.1
Q ss_pred chhHHHHHHHHHHHHHhhc--cCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 2 LELGILVHSVIIGISLGAS--ESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGI 79 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~--~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i 79 (145)
..+++++||++||+++|++ .++..++.+.+||.+||+|||++++.++..++.+++|.+.+..+.++..|+|+.+|+++
T Consensus 124 ~~lai~iHnfpEGlai~va~~~~~~~gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~ 203 (266)
T COG0428 124 LALAISLHNFPEGLAIGVAFLSNPSLGIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYL 203 (266)
T ss_pred HHHHHHHhccchhHHHHHHHhccchHHHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4689999999999999997 45568999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhc
Q 044821 80 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCM 144 (145)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M 144 (145)
....+ ..+.++.+++++|.++|+++.|++||..+++. .++...+.++.+|+.+|
T Consensus 204 ~~~~~------~~~l~~~la~aaG~mv~v~~~eliPea~~~~~-----~~~~~~~~~~~~G~~~~ 257 (266)
T COG0428 204 LGISS------PLVLPFALAFAAGAMVYVVVDELLPEAKRHGG-----GSEKLATAGLFAGFLVM 257 (266)
T ss_pred Hhhch------HHHHHHHHHHHhhcchhhhHHHHhhHHHhcCC-----CchHHHHHHHHHHHHHH
Confidence 87521 24899999999999999999999999998642 12334566888888877
No 7
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=3.7e-20 Score=155.78 Aligned_cols=137 Identities=22% Similarity=0.248 Sum_probs=118.2
Q ss_pred chhHHHHHHHHHHHHHhhc--cCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 2 LELGILVHSVIIGISLGAS--ESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGI 79 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~--~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i 79 (145)
..+|.++|||.||+|+|++ .+...++...+|+.+||+|+.+...+.|+++|++.+++++++++.++++-+|..+|..+
T Consensus 307 il~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsal~a~~G~~ig~~~ 386 (453)
T KOG2693|consen 307 ILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSALTAFAGLAIGLVL 386 (453)
T ss_pred HHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhHHHHHhhhheeEEe
Confidence 4678899999999999996 45677899999999999999999999999999999999999999999999999999887
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccc-hHHHHHHHHHHHHhhhhc
Q 044821 80 SSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTN-KRLQFGANVSLLLGAGCM 144 (145)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~-~~~~~~~~~~~~~G~~~M 144 (145)
.+.. .+ .+..++++++||.|+||+..+++||..+.++..+. .....+|+++++.|+.+|
T Consensus 387 ~~~~---~~---~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~m 446 (453)
T KOG2693|consen 387 GAGD---EE---ELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIM 446 (453)
T ss_pred cCCC---cc---chHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHH
Confidence 6531 11 26779999999999999999999998876542211 445689999999999988
No 8
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=1.5e-18 Score=134.51 Aligned_cols=114 Identities=22% Similarity=0.357 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHHhhc---cCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 3 ELGILVHSVIIGISLGAS---ESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGI 79 (145)
Q Consensus 3 ~~~l~~Hs~~eGlalG~~---~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i 79 (145)
++|+.+|..-||+|+|.+ ++.+....+++||++||.|.+|.+-..+.+.+..||+.....+.|++++|+|.+..+..
T Consensus 146 tlgLvVHaaaDGVALGaaattn~~svqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~ll 225 (303)
T KOG3907|consen 146 TLGLVVHAAADGVALGAAATTNNDSVQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTYLL 225 (303)
T ss_pred EEEEEEeeccccceecccccccCCcEEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHHHh
Confidence 578899999999999964 34566788999999999999999999999999999999999999999999999999987
Q ss_pred hhccCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 044821 80 SSVYDENSPTALI--VEGIFNAAAAGILIYMSLVDLLAADFM 119 (145)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~l~a~aaG~flyv~~~eilp~~~~ 119 (145)
.... ++++++ .+++++-+++|+|+|+++.+++||.-+
T Consensus 226 i~q~---s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~~~ 264 (303)
T KOG3907|consen 226 ILQH---SKTMLSESATGVLMLFSAGTFLYVATVHVLPELSH 264 (303)
T ss_pred hhcc---ChhhhhhhhcceeeeecCCeeEEEEEEEEccccCC
Confidence 6532 334444 448999999999999999999998876
No 9
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.50 E-value=4.7e-14 Score=110.88 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHhhc--cCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044821 4 LGILVHSVIIGISLGAS--ESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISS 81 (145)
Q Consensus 4 ~~l~~Hs~~eGlalG~~--~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~ 81 (145)
++=.+.||.-|++++.+ -+.+.++...++|++|++|+.......+.++|+.||.+...-+..+...-+|+.+.+--..
T Consensus 218 lAN~iDNFtHGLAVa~SFLVS~k~GiltT~aILLHEIPHEvgDFAILLRagF~rw~Aa~aQL~TA~~GlLGalvAi~g~~ 297 (361)
T KOG2694|consen 218 LANIIDNFTHGLAVASSFLVSTKFGILTTIAILLHEIPHEVGDFAILLRAGFGRWNAALAQLTTAAFGLLGALVAIHGHT 297 (361)
T ss_pred HHHhhhhhhhhhHHhhhhhhhhhhhHHHHHHHHHhhccchhhhhHHHHHhccchhHHHHHHHHHHHHHHhhhHHHhhcCc
Confidence 56678999999999976 3556788999999999999999999999999999999999998888888888887653221
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 82 VYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 82 ~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
.++|..+.-..+++-|.+|-|+||+..|++|+-.++++ ++..+.|++.++.|.+.|+
T Consensus 298 ---g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~----p~eslkQLl~lv~Gi~~M~ 354 (361)
T KOG2694|consen 298 ---GNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEES----PVESLKQLLMLVTGILTMS 354 (361)
T ss_pred ---CCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccC----HHHHHHHHHHHHHHHHHHH
Confidence 34555555678899999999999999999999887653 5667889999999999884
No 10
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=98.64 E-value=9.7e-09 Score=84.74 Aligned_cols=83 Identities=19% Similarity=0.281 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHH-HHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 35 FHQFFEGMGLGGCITQAKFKSRGVAILAL-FFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDL 113 (145)
Q Consensus 35 lHk~~e~~~l~~~l~~~~~~~~~~~~~~~-~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~ei 113 (145)
+||++|++++..++..++.++|+++++.. .-+...|+|.++++.+.... ... ..++..++++|.++|+...++
T Consensus 297 i~nf~Eglavslpl~~a~~Sr~~afl~~a~~g~~s~~lGll~a~~v~la~---~ig---l~~~~~a~aaG~ml~~~~~~~ 370 (406)
T KOG2474|consen 297 IHNFVEGLAVSLPLAGAGFSRLKAFLYGAVLGGVSPPLGLLIAFAVFLAE---PIG---LLPYALAFAAGAMLYVVLDDI 370 (406)
T ss_pred HhcccccceeeeehhhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHhcC---ccc---hhhHHHHHhccceEEEEeccc
Confidence 99999999999999999999999888765 56677788999999887541 111 589999999999999999999
Q ss_pred hhhhhcCCcc
Q 044821 114 LAADFMNPKM 123 (145)
Q Consensus 114 lp~~~~~~~~ 123 (145)
+||...+++.
T Consensus 371 i~~a~~~~~~ 380 (406)
T KOG2474|consen 371 IPEAQRSDNS 380 (406)
T ss_pred cccccccccc
Confidence 9988776543
No 11
>PRK04201 zinc transporter ZupT; Provisional
Probab=98.46 E-value=1.1e-06 Score=69.75 Aligned_cols=83 Identities=16% Similarity=0.131 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccc-cchHHHHHH
Q 044821 55 SRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQ-TNKRLQFGA 133 (145)
Q Consensus 55 ~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~-~~~~~~~~~ 133 (145)
.++++.+.++.++++++|+++++..... ++ ...+.++++++|.++|+++.|++||.++.-+.. ++.......
T Consensus 4 ~~~a~~~~~l~~~~t~lGal~~~~~~~~----~~---~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~ 76 (265)
T PRK04201 4 VSVALLLTLLAGLATGIGSLIAFFGKKP----NN---RFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLG 76 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc----cH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 4677889999999999999999876542 12 378999999999999999999999998731100 111223456
Q ss_pred HHHHHHhhhhc
Q 044821 134 NVSLLLGAGCM 144 (145)
Q Consensus 134 ~~~~~~G~~~M 144 (145)
..+++.|+.+|
T Consensus 77 ~~~~~~G~ll~ 87 (265)
T PRK04201 77 YGAFFGGILGI 87 (265)
T ss_pred HHHHHHHHHHH
Confidence 67888998876
No 12
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=96.30 E-value=0.026 Score=45.07 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccc----hHHHHHHHHHHHHhhhhc
Q 044821 92 IVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTN----KRLQFGANVSLLLGAGCM 144 (145)
Q Consensus 92 ~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~----~~~~~~~~~~~~~G~~~M 144 (145)
....+++++++|.|+..++.+++||.++.-+.... ..........++.|+.++
T Consensus 36 ~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~~~Gfl~~ 92 (317)
T PF02535_consen 36 RILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIFLVGFLLF 92 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHHHHHHHHH
Confidence 47889999999999999999999999985421111 011256677788887654
No 13
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=93.23 E-value=0.76 Score=36.68 Aligned_cols=83 Identities=20% Similarity=0.173 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccc-cchHHHHHH
Q 044821 55 SRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQ-TNKRLQFGA 133 (145)
Q Consensus 55 ~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~-~~~~~~~~~ 133 (145)
........++.++++.+|........... .+.+.....++++|..+|.++.+.+|+..+..... ......+..
T Consensus 7 ~l~~~~~~ll~~~~t~lG~~~~~~~~~~~------~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T COG0428 7 LLFALLLGLLAGLATALGALLVVLAVRKV------SPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPA 80 (266)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhccc------chHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHHH
Confidence 34456677889999999999887741121 23488999999999999999999998877643321 111223555
Q ss_pred HHHHHHhhhh
Q 044821 134 NVSLLLGAGC 143 (145)
Q Consensus 134 ~~~~~~G~~~ 143 (145)
..++++|...
T Consensus 81 ~~g~~~G~~~ 90 (266)
T COG0428 81 LAGFLLGVLF 90 (266)
T ss_pred HHHHHHHHHH
Confidence 6667777654
No 14
>PRK11469 hypothetical protein; Provisional
Probab=90.48 E-value=6.2 Score=29.87 Aligned_cols=53 Identities=21% Similarity=0.255 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044821 27 KPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISS 81 (145)
Q Consensus 27 ~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~ 81 (145)
..+.++...-....+++.|.+ ..+.+.++.+..++.++..+-+...+|+...+
T Consensus 7 ~llaialsmDaF~v~ia~G~~--~~~~~~~~~~~~~l~~g~~q~~m~~~g~~~G~ 59 (188)
T PRK11469 7 VLLAFGMSMDAFAASIGKGAT--LHKPKFSEALRTGLIFGAVETLTPLIGWGMGM 59 (188)
T ss_pred HHHHHHHHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666666654 34556667666666666666666665555543
No 15
>PLN02159 Fe(2+) transport protein
Probab=88.95 E-value=4.9 Score=33.29 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=40.0
Q ss_pred chhHHHHHHHHHHHHHhhc---cCCCchHH-HHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHH
Q 044821 2 LELGILVHSVIIGISLGAS---ESPKTIKP-LVAALTFHQFFEGMGLGGCITQAKF--KSRGVAILALFFSLTTPVGIAI 75 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~---~~~~~~~~-~~~aI~lHk~~e~~~l~~~l~~~~~--~~~~~~~~~~~~s~~~PlG~~i 75 (145)
+..++.+|.+|||+++|.. .+.+.... +...+..==.|-|.++|..+.+.-. +...........+++.-.=..+
T Consensus 215 l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv 294 (337)
T PLN02159 215 LIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYM 294 (337)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 4679999999999999963 33222221 2222333345677777776654211 1222233444444444433344
Q ss_pred H
Q 044821 76 G 76 (145)
Q Consensus 76 G 76 (145)
+
T Consensus 295 ~ 295 (337)
T PLN02159 295 A 295 (337)
T ss_pred H
Confidence 4
No 16
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=86.57 E-value=5.6 Score=32.84 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=42.8
Q ss_pred chhHHHHHHHHHHHHHhhc---cCCCchHHHHHHH-HHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHHHH
Q 044821 2 LELGILVHSVIIGISLGAS---ESPKTIKPLVAAL-TFHQFFEGMGLGGCITQA-KFKSRGVAILALFFSLTT 69 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~---~~~~~~~~~~~aI-~lHk~~e~~~l~~~l~~~-~~~~~~~~~~~~~~s~~~ 69 (145)
|..++++|-++||+++|.+ .+.+..+....++ ..=-.|-|.++|+-+.+. ..+.++......+-+++.
T Consensus 207 L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAa 279 (327)
T KOG1558|consen 207 LFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAA 279 (327)
T ss_pred HHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhh
Confidence 5689999999999999984 2222222222211 223478999999988876 444555555555555443
No 17
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=84.42 E-value=21 Score=29.22 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=30.7
Q ss_pred chhHHHHHHHHHHHHHhhc---cCC--CchHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 2 LELGILVHSVIIGISLGAS---ESP--KTIKPLVAALTFHQFFEGMGLGGCITQ 50 (145)
Q Consensus 2 l~~~l~~Hs~~eGlalG~~---~~~--~~~~~~~~aI~lHk~~e~~~l~~~l~~ 50 (145)
+.+++.+|.++||+++|+. .+. ...+. ...+..==.|-|.++|..+.+
T Consensus 202 l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~-~~~~fsl~tPiG~~iG~~~~~ 254 (324)
T TIGR00820 202 LIAALSFHQFFEGLGLGGCISQAEFKCKSVTI-MCTFFAVTTPLGIAIGMGISS 254 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCchHHHH-HHHHHHHhhHHHHHHHHHHhc
Confidence 5689999999999999974 222 22222 222233345678888876665
No 18
>COG1971 Predicted membrane protein [Function unknown]
Probab=82.41 E-value=20 Score=27.42 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCchHHHHHHHHHHHHHHHH
Q 044821 27 KPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDE-NSPTALIVEGIFNAAAAGIL 105 (145)
Q Consensus 27 ~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~-~~~~~~~~~~~l~a~aaG~f 105 (145)
..+.+++..-....+++.|....+ .+.++.+.....|+..+-+-..+|+++....+. -+....|.-..++.+-.--+
T Consensus 7 lllA~alsmDAFav~l~~G~~~~k--~~~~~~L~ia~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~m 84 (190)
T COG1971 7 LLLAIALSMDAFAVSLGKGLAKHK--IRFKEALVIALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKM 84 (190)
T ss_pred HHHHHHHhhHHHHHHHHhhhhhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666665544 345666666666666666655566555432210 01234455566666666666
Q ss_pred HHHHHH
Q 044821 106 IYMSLV 111 (145)
Q Consensus 106 lyv~~~ 111 (145)
+|-++.
T Consensus 85 I~e~f~ 90 (190)
T COG1971 85 IIEGFK 90 (190)
T ss_pred HHHHhc
Confidence 665553
No 19
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=81.93 E-value=21 Score=27.33 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHH
Q 044821 28 PLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIY 107 (145)
Q Consensus 28 ~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~fly 107 (145)
.+.++..+-....+++.+ +.+.+.+.+......++..+++-+|..+|..+.+..+.. ..+++-+.++.+-++-++|
T Consensus 5 llaials~Daf~vgi~~G--~~~~~~~~~~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~--~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 5 LLAFAVSLDSFGVGIAYG--LRKIKIPFLSNLIIAVISGLFIFISMLLGKFLAKFLPPK--VTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh--hHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555 333334556677778888888888888888877643210 1233444444444444444
No 20
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.19 E-value=14 Score=25.89 Aligned_cols=50 Identities=22% Similarity=0.196 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHH
Q 044821 57 GVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYM 108 (145)
Q Consensus 57 ~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv 108 (145)
..+.++.=|-..+.+|++|||++.... ..+|.. .+...+.|+.+|++.-+
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~a-gTsPwg-lIv~lllGf~AG~lnv~ 93 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFA-GTSPWG-LIVFLLLGFGAGVLNVL 93 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcHH-HHHHHHHHHHHHHHHHH
Confidence 355566667778899999999987654 345643 34567899999987644
No 21
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=74.14 E-value=18 Score=22.27 Aligned_cols=42 Identities=12% Similarity=0.200 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044821 40 EGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISS 81 (145)
Q Consensus 40 e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~ 81 (145)
++++.+...--.+.++++.+.....+++.+-+-..+|+.+.+
T Consensus 4 Daf~vg~~~g~~~~~~~~~~~~~~~ig~~~~~~~~~G~~~G~ 45 (67)
T PF02659_consen 4 DAFAVGISYGLRGISRRIILLIALIIGIFQFIMPLLGLLLGR 45 (67)
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555445777666666666666666655555555543
No 22
>PF14143 YrhC: YrhC-like protein
Probab=70.37 E-value=7.2 Score=25.15 Aligned_cols=18 Identities=11% Similarity=0.298 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 044821 99 AAAAGILIYMSLVDLLAADF 118 (145)
Q Consensus 99 a~aaG~flyv~~~eilp~~~ 118 (145)
-+|-++|+|++. ++|.+-
T Consensus 17 LLAvs~FlYiG~--viP~~~ 34 (72)
T PF14143_consen 17 LLAVSTFLYIGT--VIPIGA 34 (72)
T ss_pred HHHHHHHHHHHh--hCCccc
Confidence 345566888887 677443
No 23
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=70.23 E-value=28 Score=23.84 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHH
Q 044821 63 LFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILI 106 (145)
Q Consensus 63 ~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~fl 106 (145)
....+++-+|+++|..+...++. ++ ...+..++.|+++|.+-
T Consensus 50 ~~~v~pil~G~~lG~WLD~~~~t-~~-~~tl~~lllGv~~G~~n 91 (100)
T TIGR02230 50 WSVAIPTLLGVAVGIWLDRHYPS-PF-SWTLTMLIVGVVIGCLN 91 (100)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC-Cc-HHHHHHHHHHHHHHHHH
Confidence 34556677888889888877653 33 34466778899988764
No 24
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=68.37 E-value=14 Score=29.91 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=30.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 044821 87 SPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNP 121 (145)
Q Consensus 87 ~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~ 121 (145)
++..++-...+++|+.|..+-=.|.+++||.++.+
T Consensus 99 s~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~ 133 (361)
T KOG2694|consen 99 SSAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESN 133 (361)
T ss_pred CchhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhcc
Confidence 34566788899999999999999999999999865
No 25
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=66.76 E-value=45 Score=23.96 Aligned_cols=42 Identities=7% Similarity=0.004 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 31 AALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGIS 80 (145)
Q Consensus 31 ~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~ 80 (145)
+-..+=+..|=++-....++.|-|++..+ .+-+|.++|.++.
T Consensus 38 ~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~iG~IvG~f~~ 79 (140)
T PF04306_consen 38 VLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAIIGGIVGFFVL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHHHHHHHHHHh
Confidence 33456677777777777888888887654 4556666666654
No 26
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=66.23 E-value=50 Score=24.26 Aligned_cols=50 Identities=16% Similarity=0.069 Sum_probs=28.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH---H--HhcCCChhHHHHHHHHHHHHHHHHHH
Q 044821 25 TIKPLVAALTFHQFFEGMGLGGC---I--TQAKFKSRGVAILALFFSLTTPVGIA 74 (145)
Q Consensus 25 ~~~~~~~aI~lHk~~e~~~l~~~---l--~~~~~~~~~~~~~~~~~s~~~PlG~~ 74 (145)
....+.+++.+|+++|.+..-.. + ...|..-+..+.+.........+-..
T Consensus 38 ~~~~l~i~~~~g~~~~~li~l~~f~~lR~~sGG~Ha~t~~~C~i~s~~~~~~~~~ 92 (185)
T PF04647_consen 38 IIIILLIGLLLGMFPETLIFLLSFIPLRSFSGGYHAKTFFRCFIFSVLIFIIIIL 92 (185)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceeCCCChHHHHHHHHHHHHHHH
Confidence 34677899999999998765543 2 33454444444444444443333333
No 27
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=47.61 E-value=1.2e+02 Score=22.81 Aligned_cols=51 Identities=14% Similarity=0.056 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 044821 32 ALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSV 82 (145)
Q Consensus 32 aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~ 82 (145)
++..+.+++.++-.....+...+..-.+.....+....-+|..+|..+...
T Consensus 36 a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~iG~~l~~~ 86 (240)
T PF01925_consen 36 AVATSLFINLFTSLIAALRHRKHGNIDWKIVLPLIIGALIGVVIGAWLLSL 86 (240)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccchhhhhhhhhHhHHHHHHHHhhhcc
Confidence 444555555554444433221111112233444556666777777777654
No 28
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=47.42 E-value=1.4e+02 Score=23.67 Aligned_cols=32 Identities=9% Similarity=0.021 Sum_probs=25.6
Q ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044821 48 ITQAKFKSRGVAILALFFSLTTPVGIAIGIGI 79 (145)
Q Consensus 48 l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i 79 (145)
..-.|.+++++..+++..+.+.-+|+.+=-..
T Consensus 172 ~l~~G~~r~~A~~fSFllsiP~ilga~~l~~~ 203 (259)
T PF02673_consen 172 GLLLGLDREEAARFSFLLSIPAILGAGLLELK 203 (259)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568889999999999999999988764333
No 29
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive a sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of a methyl group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0015948 methanogenesis, 0016021 integral to membrane
Probab=43.26 E-value=48 Score=21.23 Aligned_cols=20 Identities=25% Similarity=0.556 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 044821 94 EGIFNAAAAGILIYMSLVDL 113 (145)
Q Consensus 94 ~~~l~a~aaG~flyv~~~ei 113 (145)
.+++.|+.+|.++|+.+.-+
T Consensus 47 iGIlYG~v~Glii~~~~~~l 66 (70)
T PF04210_consen 47 IGILYGLVIGLIIFIIYIVL 66 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999987644
No 30
>COG0395 UgpE ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
Probab=41.31 E-value=1.9e+02 Score=23.26 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH-HHHHHHHh-hccCC-CCchHHHHHHHHHHHHHHHHHHHHH
Q 044821 34 TFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVG-IAIGIGIS-SVYDE-NSPTALIVEGIFNAAAAGILIYMSL 110 (145)
Q Consensus 34 ~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG-~~iG~~i~-~~~~~-~~~~~~~~~~~l~a~aaG~flyv~~ 110 (145)
.+=+..-+.--+..+.+-..+.++.+...++...+-|.- ..+..+.. ...+- |+....++.....++.-++|++-.+
T Consensus 86 t~l~i~~~~laaYalar~~f~g~~~~~~~~l~~lm~P~~v~~iPl~~~~~~lgl~nt~~glil~~~~~~~pf~ifl~~~f 165 (281)
T COG0395 86 TVLSLLLSSLAAYALARFRFKGRKLLFLLLLLTLMLPAQVLLIPLYLLMRKLGLLNTYWGLILPYLAFGLPFAIFLLRQF 165 (281)
T ss_pred HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 444444455555567777777777666666777566653 33333332 22211 2223334444556668899999999
Q ss_pred HHHhhhhhcCC
Q 044821 111 VDLLAADFMNP 121 (145)
Q Consensus 111 ~eilp~~~~~~ 121 (145)
.+=+|+|.++.
T Consensus 166 f~~iP~eleEA 176 (281)
T COG0395 166 FRTIPKELEEA 176 (281)
T ss_pred HHhCCHHHHHH
Confidence 99999999864
No 31
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional
Probab=39.30 E-value=58 Score=21.25 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 044821 94 EGIFNAAAAGILIYMSLVDLLA 115 (145)
Q Consensus 94 ~~~l~a~aaG~flyv~~~eilp 115 (145)
.|++.|+..|..+++....+.|
T Consensus 50 iGIlYG~viGlli~~i~~~~~~ 71 (77)
T PRK01026 50 IGILYGLVIGLLIVLVYIILSP 71 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999988876654
No 32
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G. coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranfersae is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=38.41 E-value=61 Score=20.72 Aligned_cols=23 Identities=17% Similarity=0.398 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 044821 93 VEGIFNAAAAGILIYMSLVDLLA 115 (145)
Q Consensus 93 ~~~~l~a~aaG~flyv~~~eilp 115 (145)
=.+++.|+..|..+|+...-++|
T Consensus 46 DiGIlYG~viGlli~~~~~~l~~ 68 (70)
T TIGR01149 46 DIGILYGLVIGLILFLIYILLSS 68 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 36899999999999988765543
No 33
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=37.78 E-value=2.7e+02 Score=24.01 Aligned_cols=94 Identities=12% Similarity=0.058 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHH
Q 044821 26 IKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGIL 105 (145)
Q Consensus 26 ~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~f 105 (145)
...+.+..-+=-.+-++.-+..-.+-|.+.++.+....+.....|+...+|...... ..+++..-++.+++.|+.-|..
T Consensus 319 l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~-g~~~~~~f~~~a~~~G~~~G~~ 397 (477)
T PF11700_consen 319 LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF-GLKSPWEFWVLAVLIGLFMGGI 397 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc-CcccHHHHHHHHHHHHHHhhhH
Confidence 334444444555555555554445555555577777777778888888888766532 2233434456666777776654
Q ss_pred HH---HHHHHHhhhhhcC
Q 044821 106 IY---MSLVDLLAADFMN 120 (145)
Q Consensus 106 ly---v~~~eilp~~~~~ 120 (145)
-= .-+.|++|++.+.
T Consensus 398 qs~sRs~~~~LiP~g~e~ 415 (477)
T PF11700_consen 398 QSASRSLFSRLIPPGREA 415 (477)
T ss_pred HHHHHHHHHHhCCCchhh
Confidence 32 2346888887763
No 34
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=37.49 E-value=87 Score=18.36 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHH
Q 044821 62 ALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGIL 105 (145)
Q Consensus 62 ~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~f 105 (145)
...+..+.-+|..+|+.+.+..+. +| --.+.+.+.|+++|..
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t-~p-~~~~~g~llG~~~g~~ 48 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGT-SP-WFTLIGLLLGIAAGFY 48 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-Ch-HHHHHHHHHHHHHHHH
Confidence 345556677888999999887644 33 3346667788887753
No 35
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=34.36 E-value=2e+02 Score=24.15 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CchHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhc
Q 044821 43 GLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDEN-SPTALIVEGIFN-AAAAGILIYMSLVDLLAADFM 119 (145)
Q Consensus 43 ~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~-~~~~~~~~~~l~-a~aaG~flyv~~~eilp~~~~ 119 (145)
.+..++...|..-.-..++..+..++.|++..+|..+.+..+-+ ++.++....++. ++.. ++-+.+.-++|+..+
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~--ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ--LLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH--HHHHHHHHHcCCCch
Confidence 34555666665555566677788889999999998887654321 112222222222 2332 677777778887444
No 36
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=32.64 E-value=36 Score=28.90 Aligned_cols=63 Identities=24% Similarity=0.173 Sum_probs=41.0
Q ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044821 47 CITQAKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAA 116 (145)
Q Consensus 47 ~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~ 116 (145)
++.+...+.+.++...+.....+.+|+. +.+.... + .+.+....+|+|+|.++|.++.-++-+
T Consensus 37 ~l~~~~~sv~~all~tl~~~~~tslga~--~vv~~~~--~---~~~~l~~~lGfAaGvmLaaSf~S~l~~ 99 (406)
T KOG2474|consen 37 LLIRGINSVRQALLGTLLLGGLTSLGAA--YVVLVEA--N---SRKVLDISLGFAAGVMLAASFWSLLAH 99 (406)
T ss_pred HhccccchHHHHHHHHHHHHHHHhcccc--eEEEEec--C---chhhhhhhhchhhhHHHHHHHHHhhcc
Confidence 3444455666777777777777777664 3332211 1 123788999999999999999755443
No 37
>COG5548 Small integral membrane protein [Function unknown]
Probab=31.79 E-value=1.4e+02 Score=20.37 Aligned_cols=39 Identities=18% Similarity=0.347 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044821 62 ALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSL 110 (145)
Q Consensus 62 ~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~ 110 (145)
...+|+-+-+|.+|||+-.+. ....+-|...|..++++-
T Consensus 7 A~~ls~L~tiGGliGY~rk~S----------~vSL~sG~~~G~~~~~A~ 45 (105)
T COG5548 7 AIALSMLATIGGLIGYFRKNS----------QVSLLSGVFSGLLLFVAA 45 (105)
T ss_pred HHHHHHHHHhhhHHHHHhcCC----------chhhHHHHHHhHHHHHHH
Confidence 346777888999999986542 123556667777777765
No 38
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=30.27 E-value=2.5e+02 Score=22.05 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHH
Q 044821 56 RGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIY 107 (145)
Q Consensus 56 ~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG~fly 107 (145)
+-.+.+...|....-++.++|+.+.+ .......+++.|+.+.++++
T Consensus 26 ~l~~~ml~a~l~~~~v~v~ig~l~~~------~~~~~i~gi~~g~l~am~vl 71 (224)
T PF13829_consen 26 KLPWLMLGAFLGPIAVFVLIGLLFGS------WWYWLIIGILLGLLAAMIVL 71 (224)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666677777776643 12233445555555544443
No 39
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.55 E-value=1.4e+02 Score=27.51 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044821 28 PLVAALTFHQFFEG--MGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGISS 81 (145)
Q Consensus 28 ~~~~aI~lHk~~e~--~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~ 81 (145)
.++++-++|=+-+. +.+|.+......++++.-++..+...+..+|-++|+.+.+
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS 294 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGS 294 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHH
Confidence 44555555544332 4567778888888877777777777888888888887654
No 40
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=25.48 E-value=1e+02 Score=24.53 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044821 57 GVAILALFFSLTTPVGIAIGIGISSVYD 84 (145)
Q Consensus 57 ~~~~~~~~~s~~~PlG~~iG~~i~~~~~ 84 (145)
+.+-..+-|.+..|+|+++|.++.+.++
T Consensus 6 ki~g~~~G~~~~g~~Ga~~G~~~Gh~~d 33 (267)
T PRK09430 6 KILGFAFGFLFGGFFGALLGLLIGHMFD 33 (267)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhHHh
Confidence 4555666778889999999999887654
No 41
>PF11297 DUF3098: Protein of unknown function (DUF3098); InterPro: IPR021448 This bacterial family of proteins has no known function.
Probab=25.31 E-value=66 Score=20.52 Aligned_cols=20 Identities=30% Similarity=0.104 Sum_probs=14.4
Q ss_pred chHHHHHHHHHHHHhhhhcC
Q 044821 126 NKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 126 ~~~~~~~~~~~~~~G~~~M~ 145 (145)
|...-....+.+++||.+|+
T Consensus 7 Nyill~iG~~vIilGfilMs 26 (69)
T PF11297_consen 7 NYILLAIGIAVIILGFILMS 26 (69)
T ss_pred HHHHHHHHHHHHHHHHHhee
Confidence 44445566778889999885
No 42
>cd02431 Ferritin_CCC1_C CCC1-related domain of ferritin. Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea.
Probab=24.54 E-value=2.8e+02 Score=20.09 Aligned_cols=65 Identities=17% Similarity=0.170 Sum_probs=30.0
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Q 044821 51 AKFKSRGVAILALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAG-ILIYMSLVDLLAADF 118 (145)
Q Consensus 51 ~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~~~~~~~~~~~~~~~~~l~a~aaG-~flyv~~~eilp~~~ 118 (145)
...+........+.-.++--+-+..|-++....+.+.. .-.++-.+++.| .|+--++..++|--+
T Consensus 25 a~~~~~~i~~~Gl~~~iA~a~SMa~G~YlS~kse~d~~---~~~p~~~al~s~~sf~~g~~iPllp~~~ 90 (149)
T cd02431 25 AINNTILVGLSGLIVGIAAALSMAIGAYLSTKSESGVK---ESNPVKSALYTGIAYIIGVVIPILPYLL 90 (149)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHH---hcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555555555666666666543111100 002444444444 344455556666443
No 43
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases. The majority have a HExxH zinc-binding motif characteristic of neutral zinc metallopeptidases, however there is no evidence to support their function as metallopeptidases.
Probab=24.37 E-value=3.5e+02 Score=21.19 Aligned_cols=18 Identities=11% Similarity=0.041 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 044821 27 KPLVAALTFHQFFEGMGL 44 (145)
Q Consensus 27 ~~~~~aI~lHk~~e~~~l 44 (145)
-...+++..||.=+++-.
T Consensus 86 SiaAvaVAAHEvGHAiQ~ 103 (222)
T PF04298_consen 86 SIAAVAVAAHEVGHAIQH 103 (222)
T ss_pred CHHHHHHHHHHHhHHHhc
Confidence 356899999999887643
No 44
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=20.29 E-value=3.8e+02 Score=20.02 Aligned_cols=52 Identities=10% Similarity=0.049 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 044821 55 SRGVAILALFFSLTTPVGIAI-GIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAAD 117 (145)
Q Consensus 55 ~~~~~~~~~~~s~~~PlG~~i-G~~i~~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~ 117 (145)
++|+..+....+...=+.... +..+.+ ...+++-+.+...+|.+..|+.++.
T Consensus 30 r~kal~~Gi~~A~~lR~~~i~~~~~ll~-----------~~~~i~~igG~~Ll~~a~k~~~~~~ 82 (183)
T PF03741_consen 30 RRKALFWGIIGAIVLRIIFIFLASWLLS-----------IFPWILLIGGLFLLYIAIKLLHEER 82 (183)
T ss_pred hhhhHHHhHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 456677766666555443322 222222 1256788888899999999998865
Done!